Conserved Protein Domain Family
DUF4813

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pfam16072: DUF4813 
Domain of unknown function (DUF4813)
This family of proteins is functionally uncharacterized. This family of proteins is found in eukaryotes. Proteins in this family are typically between 345 and 672 amino acids in length.
Statistics
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PSSM-Id: 318322
View PSSM: pfam16072
Aligned: 4 rows
Threshold Bit Score: 184.137
Threshold Setting Gi: 193904810
Created: 29-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 195437754 241 GATy---hPSGYSpaggYHPGGYAPAGATYHPAGQVPAGATF-----YPSGGVPHGATYYPQAPV-AAVPAGATFLPAGA 311
gi 195034020 267 GATyhsapPAGAT----YHSPGALPAGATYHPGGYSPGGAGYhpvahYPTQGVPHGATYYPQAPV-AAMPAGATYLPAGA 341
gi 969454271 357 GQV-----PAGAS----YHPAGQYPAGASYHPA-----GATY-----HSPGQIPQGATYYPQAPMgGGLPPGATFLPAGG 417
gi 195385869 260 AL------PAGAT----YHPSGYAPAGASYHPAGQIPPGASY-----YPSGGVPHGATYYPQAPV-AAVPAGATYLPAGA 323
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 195437754 312 AIPAGATYYPQAPqRSSSGLGLGTGLIAGALGGAILGHALTPTQTRVIEHSPSYGG-GGGGGGysngnnDDKIIIINNGP 390
gi 195034020 342 AIPAGATYYPQAP-KSSSGLGLGTGLIAGALGGAILGHALTPTQTRVVEHAPVSSG-GGGGGG------EDKIIIINNGP 413
gi 969454271 418 ALPAGATYYPQAPqKSGSGFGLGTGLIAGALGGAILGHALTPTQTRVVEHAPSYSGgGGGGGGgg---gEDKIIIINNGP 494
gi 195385869 324 GLPPGATYYPQAP-KSSSGLGLGTGLVAGALGGAILGHVLTPTQTRVVEHAPMSGGyGGGGGGgsngggEDKIIIINNGP 402
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 195437754 391 PGSVTTTSAGSGTTVINAggQQQA---PAAPSYPVAP------VPPAPPAPAAGEP--------QTPLAPLNPVPPAPAA 453
gi 195034020 414 PGSVTTSEVGSGTTVINT--QQPGa--PAAPAAAYPAaaypaqAPAPAPAPLPAAPgapdplvgQTPLAPLASGAALASA 489
gi 969454271 495 PGSVTTSEVGSGTTVINAggVQQPagyPAQPMAAAAPaapapqVPGGAP---------------LAPLAPIAPLAALPQA 559
gi 195385869 403 PGSVTTTDAGSGTTVINAggAQPAa--PAAPAYQPAPagapaaAPAAAPAPVPSAP--------QTPLAPLTPSAAEGAI 472
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 195437754 454 AAGEAaapvpppvAAPAPSNAAPV--PPAPAAPpadaNSAPPPApGGIICVPVRVPEPDPKDATKTIEVEKIACYPAPPP 531
gi 195034020 490 AAGAA--------SAASPAAAAPPaaPGAPGAP----DPNAPPA-GGIICVPVRVNEPDPNDATKTIEVEKIACYPAPPP 556
gi 969454271 560 PAVPGatp--adtNAPAPAPGAPPaaPADPNVPatpaDPNAPPAaGGIICVPVKVPEPDPNDATKTIEVEKIACYPAPPP 637
gi 195385869 473 AATAAgag---laNAAAPAAAAPP--PVDPNAPaa---aaAPPApGGIICVPVRVPEPDPKDPTKTIEVEKIACYPAPPP 544

                 .
gi 195437754 532 E 532
gi 195034020 557 E 557
gi 969454271 638 E 638
gi 195385869 545 E 545
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