Conserved Protein Domain Family
40S_SA_C

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pfam16122: 40S_SA_C 
40S ribosomal protein SA C-terminus
This domain is found at the C-terminus of 40S ribosomal protein SA.
Statistics
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PSSM-Id: 318369
View PSSM: pfam16122
Aligned: 20 rows
Threshold Bit Score: 46.4308
Threshold Setting Gi: 321467258
Created: 29-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82202482  202 YFYRDPEEIEKEEQAAAEKA-TTKEEyqgEWTAPVa-EF---PQA-----------EVADWS-EG--VQVPSVPIQQFPA 262
gi 74904851  202 FFYRDPEESEKDEQQAKEQAvVPAKP---EVVAPVheDWnetLEP------------VASWAeDTapPAAPAAAPAFGAP 266
gi 332024006 193 FFYRDPEEAEKEEQAAKEIApAK------EFTGPV--ETapaPEPgwvndvestavATENWAdDV--APPAAAAIPAAGA 262
gi 748517470 206 YFYRDPEAEDQKDQGAEESKaAGAEE---APAATE--FA---AAGg-------------DWDaTG--P-VGSFPTTT--- 258
gi 831341598 205 YFYRDPEAEENKEI-AEEAKaPGAEE-----------------VGagaidsgfasaGAADWEvSG--PAAGAFAATAAAT 264
gi 357628132 202 FFYRDPEESEKEEQQAKEQAvVAAKAe--EAVLPVe-----yVEPv---------eAPTVWAdDT--PGAPAAAVAFTAT 263
gi 91089051  202 FFYREPEEAEKEEQAAKEAVaVKPEVv--------------aHEPqdle---wntmEAQDWTtTE--PAAPVPVAAGAAA 262
gi 307206930 167 FFYRDPEEAEKEEQAAKEIAlAKE------FTGPV--ETtpaPEPgwmnevettaaVTCDHGeLG--RRCSTANSHCRYH 236
gi 307199481 204 FFYRDPEEVQKEEQAAKEIApAKE------FTSTTveATvpaPEPgwanevettavTTENWAdDV--APPTAAPIPPAAN 275
gi 644992794 204 FFYRDPEEAEKEEQAAKELApAVKE-----YV-PV---AdamPTEswangsdpnapATENWAdDV--PAGPAVEAAAAAP 272
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 82202482  263 erpeiPAAKPaAEDWSSQP------AsTDDWSA---APTA--QASewtgTTTEWS 306
gi 74904851  267 ---------PaQEEWSAQV--------QDEWSTtaaAPAA--AT-----AAPSWG 297
gi 332024006 263 -----TQSFQtSGDWAAQP--------PEEWS----TPVA--TA-----ATQSWG 293
gi 748517470 259 ------QGVTaGTSWDAEAdwqntqP-TADWADsgnAQPA--GGE----TQSGW- 299
gi 831341598 265 -----GAAATaGAGWDGEA--------GAEWAAqpaGTTTdwAAAdpkaATEDW- 305
gi 357628132 264 ---------PpKEDWAAQV--------QEEWPNaptAPAP--AAA----AAPSWG 295
gi 91089051  263 -----PYQPAaTDDWAAQV--------QEEWGAnatATQP---------AQPNWG 295
gi 307206930 237 -----------CRQYYAPP---------EEWS----TPVA--TA-----AAQSWG 260
gi 307199481 276 t----TQPFQtGGDWAAQP--------PEEWS----TSVA--TA-----PAQSWG 307
gi 644992794 273 va-aaATPFPtSNEWNAAP------I-SEEWS----ASTP--AAEi--vPTASWG 311
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