4KH3,4KH3


Conserved Protein Domain Family
AIDA

?
pfam16168: AIDA 
Click on image for an interactive view with Cn3D
Adhesin of bacterial autotransporter system, probable stalk
The AIDA repeat is found on bacterial autotransporter proteins. As the repeat is short and occurs multiple times, it is likely to be the region of the transporter that acts as the stalk between the beta-barrel inserted into the membrane and the N-terminal head domain.
Statistics
?
PSSM-Id: 318411
View PSSM: pfam16168
Aligned: 17 rows
Threshold Bit Score: 48.0922
Threshold Setting Gi: 160332302
Created: 29-Jul-2016
Updated: 4-Aug-2016
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
4KH3_A        281 G-AFSV-VAGKADNVVLENGGRLDVLSGHTATNTRVDDGGTLDIRNGGAATTVSMgNGG 337
gi 160332302  762 GvAFSI-EQGAANNILLANGGVLTVESDTSSDKTQVNMGGREIVKTKATATGTTL-TGG 818
gi 160332302  892 G-TFSI-SGNLATNMLLENGGNLLVLAGTEARDSTVGKGGAM--QNLGQDSATKVnSGG 946
gi 160332302  564 GdAFYI-RNSEAKNVVLENAGSLTVVTGSRAVDTIINANGKMDV--YGKDVGTVLnSAG 619
gi 465619     263 G-QFSI-KDGVSKNYELDDGSGLIVMEDTQAIDTILDKHATM--QSLGKDTGTKV-QAN 316
gi 160332302  470 S-HFTI-TGGEANYVVLENTGELTVVAKTSAKNTTIDTGGKLIVQKEAKTDSTRLnNGG 526
gi 160332302  304 G-AFSI-HNHVADNVLLENGGHLDINAYGSANKTIIKDKGTMSVLTNAKADATRIdNGG 360
gi 54040656   329 G-AFSV-VEGKADNVVLENGGRLDVLTGHTATNTRVDDGGTLDVRNGGTATTVSMgNGG 385
gi 20178196   105 G-EFSV-DKGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLV--NGTTSAVVVdEGG 159
gi 775259474   57 G-TFTVdSAGSSYNATVLSGGLQSITNGGRAYYVAVSSGGAQIVSSGGKLTHTQL-NPG 113
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap