Conserved Protein Domain Family
T-box_assoc

?
pfam16176: T-box_assoc 
T-box transcription factor-associated
This domain lies downstream of the T-box in many eukaryotic T-box proteins. The exact function is not known.
Statistics
?
PSSM-Id: 318418
View PSSM: pfam16176
Aligned: 15 rows
Threshold Bit Score: 243.571
Threshold Setting Gi: 597736424
Created: 30-Jul-2016
Updated: 4-Aug-2016
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82177488   425 QIVPGARYAMQ-PFFQDQFVNNLP--QNhRFY-------GS-------ERAVPQTNGLLSPQSEDSaAGSASAQRWFVGP 487
gi 597736424  430 QLMPGARYAMTgSFLQEQFVGSYAaaKS-RFH-------AGaggaagaDRGVPLANSLLSPQPSDE-AAVGSPQRWFVAP 500
gi 1033389684 385 QIVPGARYSVQ-PFFQEQFVNNLP--PA-RFY-------NG-------ERTVPQTNGLLSPQQNE--EVTNPPQRWFVTP 444
gi 410896992  418 QIVPGARYAMPsSFLQDQFVSTYA--KS-RFHpgmgtgpGT-------ERSVPLGNSLLSPQQSEEpTVDTPPQRWFVTP 487
gi 554814924  418 QIVPGARYAMPsSFLQDQFVSTYA--KS-RFHpgvgtgpGT-------ERSVPLGNSLLSPQQTEEpSVATPPQRWFVTP 487
gi 573897752  418 QIVPGARYAMAgSFLQDQFVSSYA--KS-RFHpgagtgpGT-------DRSVPHSNSLLSPQQAEE-TAAASPQRWFVTP 486
gi 557023422  187 QIVPGARYSVQ-PFFQDQFVNNLP--QA-RFY-------NG-------ERTVPQSNGILSPQQTEE-LGNPSPQRWFVTP 247
gi 597758405  448 QIVPGARYAMQ-PFFQDQFVNNLP--QNhRLY-------GS-------ERAVPQTNGLLSPQAED--SAATAASRWFV-- 506
gi 47219500   418 QIVPGARYSMQ-PFFQDQFVNNLP--QN-RFY-------TS-------ERAVPQTNSLLSPQSEDA-SAAASAQRWFVPP 478
gi 736166792  405 QIVPGARYAMQ-PLFQDQFVNNLP--QN-RYY-------NS-------ERAVPQTNSLLSPQAED-----ATSQRWFVTS 461
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82177488   488 VQqs----gaTTKLDL---SYD----SEYS--AS------------SLLPY---GIKPLPL-----QSPHALGYYPDSAf 534
gi 597736424  501 AN--------NHRLDFa--AAS----AYDA--AAaaaaadlagnaaTLLSYaaaGVKPLPLgaaagCSNRALGYYGEAP- 563
gi 1033389684 445 VQqa-----gANKLDMn--SYE----TDYS--SS------------TLLPY---GIKSLPL-----QTSHALGYYPDPTf 491
gi 410896992  488 A---------NNRLDFaasAYDa---ADFAgnAA------------TLLSYaaaGVKALPLst-agCSNRPLGYYADPSg 542
gi 554814924  488 A---------NNRLDFaasAYDa---ADFAgnAA------------TLLSYaaaGVKALPLpt-agCSNRPLGYYADPSg 542
gi 573897752  487 A---------NNRLDFaasAYDaaaaADFAgnAA------------TLLSYaaaGVKALPLpt-agCSGRPLGYYTDPSg 544
gi 557023422  248 VQqp-----gANKLDFs--SYE----TEYS--PS------------TLLPY---SIKSLPI-----QTTHALGYYPDPAf 294
gi 597758405  507 -Qqg----gaSGKLDL---TYD----TDYS--AS------------SLLPY---GIKPLPL-----QSPHALGYYPDSf- 551
gi 47219500   479 VQqp-----gSNKLDL---SYE----NDYS--AS------------SLLSY---SIKPLSL-----QTSHALGYYPDTAf 524
gi 736166792  462 MQqggngtstSNKLDLt--PYD----GEYS---S------------SLLPY---GIKSLSM-----QTSHALSYYPDSPf 512
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82177488   535 --------------------aSMAA----------------------------------GWSSRSS---YQRKMTT-GLP 556
gi 597736424  564 ---------------------AWGArtppqycgggtttmgatsvgstagtttkpgsvlsCWGRAGAsgyLLGPDDS-DGA 621
gi 1033389684 492 --------------------sPMag-----------------------------------wGSRGS---YQRKMSA-GLP 512
gi 410896992  543 wggrtppqycgvns--------------------------------ksgsvfscwpsnsigGRAGTs--YLAEEGD-SIP 587
gi 554814924  543 wggrtppqycgvnsksssvfsCWptn--------------------------------tigGRTGTs--YLSEEGD-SIT 587
gi 573897752  545 wgartppqy---csksssvlsCWptn--------------------------------stgSRTGAsnsYLGEEGD-SLA 588
gi 557023422  295 --------------------aSMag-----------------------------------wGPRGSl--YQKKVTTsGLS 317
gi 597758405  552 --------------------aSMaaag-------------------------------wgtSRSSS---YQRKMTT-GLP 576
gi 47219500   525 --------------------aSMaa----------------------------------gwGTRGS---YQRKMTT-GLP 546
gi 736166792  513 --------------------tTMsa----------------------------------gwGSRAA---YQRKVSP-SLP 534
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82177488   557 WSPRPSPP-AYTDDLLS-SKDKLQdenstaa-ptaastGPW-MEAPPVLKSVDSGDTSGYSMAcKRRRVSPGGSSTDASP 632
gi 597736424  622 AAPDRSPL-GATDEGSK-AKELSE--------------AAW-IEPPSSIKSIDSSDSGIFEQA-KRRRMSPSAKPLSETS 683
gi 1033389684 513 WTSRTSPp-GFSEDLL--PKEKvKee----------igSSW-IETPPSIKSLDSNDSGVYTGAcKRRRLSPSTSSNENSP 578
gi 410896992  588 -AERSPI--GGSEENK--GKDVaSe-------------SNW-IKTPSSIKSIDSSDSGIFEQA-KRRRISPTPTPVSETM 647
gi 554814924  588 -TERSPI--GGSEETK--PKDMtSe-------------SSW-IETPSSIKSIDSSDSGIFEQA-KRRRISPSATPVSETV 647
gi 573897752  589 -TERSPL--GGSEDTK--PKDL-Se-------------SSW-IETPSSIKSIDSSDSGIFEQA-KRRRISPSATPVSETA 647
gi 557023422  318 WTSRTSQ--SFSEDQVT-SKDKiKve----------anSMW-TDTSPSIKSLDSTDSGVYSSAcKKRRVSPSTSSTENSP 383
gi 597758405  577 WSPRPSPp-AFSDDPLV-TKDKlQeegstgtavtvgssAVWgLETTPGLKPMDSGD---YTMVcKRRRLSPGGSSTDASP 651
gi 47219500   547 WSPRPSPp-AFSEDQLGiPKDKmPeesv-------ppaSTW-IETSQSLKSVDSTDSGVYSMVcKRRRMSPGGSSTENSP 617
gi 736166792  535 WSPRPSTttGFPEDLDK-VKAQiEeevng----sasliSSW-TETQPSALSLDKADS--YSTAcKRRRLSLNGPITEDSS 606
                         330       340       350
                  ....*....|....*....|....*....|....*.
gi 82177488   633 T-IKCEDLS-----SEEYNKES--HKAM-GYYAFYT 659
gi 597736424  684 SpLKAEILA-----PRECEKTC--PKDM-GYYSFYT 711
gi 1033389684 579 T-MKCEDIN-----AEDYGKDT--AKGM-GYYAFYT 605
gi 410896992  648 SpLKSELLS-----PRECEKNC--TKDI-SYYNFYT 675
gi 554814924  648 SpLKSELLT-----PRECEKNC--TKDI-GYYSFYp 675
gi 573897752  648 SpLKSEVLT-----PRECEKNC--AKDI-GYYSFYS 675
gi 557023422  384 T-IKCEDIT-----SGEFGKDN--SKAM-GYYAFYT 410
gi 597758405  652 T-IKCEDLT-----AEEYSKEQh-PKGL-GYYAFYT 679
gi 47219500   618 T-IKCEDLT-----TDEY-KDN--PKGM-GYYAFYT 643
gi 736166792  607 SdIKCEDLAsaainSSSYIKDApsSKGMaAYYSFYT 642
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap