5EMO


Conserved Protein Domain Family
Qua1

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pfam16274: Qua1 
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Qua1 domain
This domain, approximately 40 residues in length, is mainly found in KH-domain containing, RNA-binding, signal transduction-associated protein 1 from yeast to human. It forms a homodimer composed of a perpendicular interaction of two helical hairpins, and the Qua1 domain is sufficient for homodimerization which is required for the regulation of alternative splicing.
Statistics
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PSSM-Id: 318503
View PSSM: pfam16274
Aligned: 11 rows
Threshold Bit Score: 84.4007
Threshold Setting Gi: 340369922
Created: 31-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
5EMO_A         7 YLPELMAEKDSLDPSFTHALRLVNQEIEKF-QK-GEG---KDEEKYIDVVINKN 55
gi 62511108  103 YLPELMAEKDSLDPSFTHAMQLLSVEIEKI-QK-GESk-kDDEENYLDLFSHKN 153
gi 847100151   7 YLPELMAEKDSLDPSFTHAMSLLGKEIERL-KKgGDAk-kDEEDTYLDLFSHKN 58
gi 597771362   7 YLPQLLAERDSLDGSFIHAMKLISAEIERV-QK-EEAp-eKDNEAYLDLFTAKN 57
gi 260829305  13 YLPQLLAEKDSLDPSFVHASRLIEEEISKL-EK-DDk--sKEPPKYKEVHTDKp 62
gi 340369922  28 ILEELKAEKNALDPSFCHCIRLLEAEINRLaDR-NDPdksLKEKIYIPIEDQKN 80
gi 634847439   5 YLPELMAEKDSLDPSFTHALRLVNQEIEKF-QK-GES---KEEEKYIDVVINKN 53
gi 432904030   6 CLPELVAEKNSLDPSFVHAVRLLAEEIEKY-DG-DELrkdGDVKKYLDIISNKN 57
gi 724851606   6 YLPELMAEKDSLDPSFVHASRLLAEEIEKF-QG-SDGkkeDEEKKYLDVISNKN 57
gi 657549977  31 YLPELLAEKDSLDSSFTHAMKLISAEIERI-QK-GETkkePEKETYLDLFATKN 82
gi 82185716    7 YLPQLLAERDSLDPSFTHAMKLISAEIEKI-EK-GDTe--KDTESYLDLFTMKN 56
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