2MKI


Conserved Protein Domain Family
RRM_7

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pfam16367: RRM_7 
Click on image for an interactive view with Cn3D
RNA recognition motif
Statistics
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PSSM-Id: 318564
View PSSM: pfam16367
Aligned: 15 rows
Threshold Bit Score: 146.29
Threshold Setting Gi: 541043179
Created: 30-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2MKI_A        12 SRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHK----AESkSYFP--------------PKGYAFLLFQDESSVQALI 73
gi 269849697 245 SRKVFIGGLPIDVSEEQVWATFGAFGKVLIDWPRR----PEHnAERAeqelkk--gsgsraVTGYVFLVFTHERSVQELV 318
gi 55976385  250 SRKVFIGGLPIDVPDEEVYVTFGSFGKVLIDWPRR----PEHnGRASdmyesemgrrnlrsVSGYVFLVFTHEDSVQDLV 325
gi 82249026  303 SCKVFLGGVPWDITEAGLINTFKCYGPLSVEWPGKdgkhPRCpPKGNmp-------------kGYVYLVFESDKSVRALL 369
gi 307133512  37 SRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHK----AESkSYFP--------------PKGYAFLLFQDESSVQALI 98
gi 47230709  307 SCKVFLGGVPWDITEAGLVNTFSAYGPLTVEWPGKd---GKHpRCPPkg----------nvAKGYVYLVFESDKSVRALL 373
gi 688615915 239 SCKVFLGGVPWDITEASLQSTFSVFGPLKVEWPGKdgkhPRCpPQ------------------GYVYLLFDWEKSVKSLL 300
gi 198424219 373 SPKVFVGGVPWDITEAALHMTFKPYGLVRVEWPGKdmkgPRYpLRA-----------------GYVYLLFESDKSIKSLL 435
gi 170579891 100 SRKVFVGGLPIDIDENELTATFSRFGPLIVDWPNK----NENkSYFP--------------PKGYVFLIFEYEVSVRALV 161
gi 954594404 481 SCKVFVGGVPWDITEQSLICAFRQFGSVRVEWPGRearyARSaMKPVtsn----------rgKGYVYMIFEQESSVHFLL 550
                         90       100       110
                 ....*....|....*....|....*....|....*..
2MKI_A        74 DACIEED------GKLYLCVSSPTIKD---KPVQIRP 101
gi 269849697 319 NACEFYE------DKYYLQLSSPTMTD---KAVQVRP 346
gi 55976385  326 NACEFYD------GKYYLQLSSPTMQD---KAVQVRP 353
gi 82249026  370 QDCTEDLlhpegySEYYFKMSSRRMRC---KDAQVIP 403
gi 307133512  99 DACIEED------GKLYLCVSSPTIKD---KPVQIRP 126
gi 47230709  374 HACSQDPfhpednREFYFKMSSRRMRC---KDVsgrr 407
gi 688615915 301 LACTQHRlqaddyLQFYYKLSSRRIHS---KDVQVIP 334
gi 198424219 436 LNCTHDVt----tNECFFRLSSRRMRS---KEVQIIP 465
gi 170579891 162 QSCFVED------EKLFLYISSPLSPD---KLVQIRP 189
gi 954594404 551 QNCMRDYsr---dGEWYFKLNSRRMHArevRQVQIIP 584
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