Conserved Protein Domain Family
DUF4998

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pfam16389: DUF4998 
Domain of unknown function
This family around 200 residues locates in the N-terminal of some uncharacterized proteins in various Bacteroides and Parabacteroides species. The function of this family remains unknown.
Statistics
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PSSM-Id: 318580
View PSSM: pfam16389
Aligned: 26 rows
Threshold Bit Score: 199.425
Threshold Setting Gi: 81443769
Created: 29-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81443802   20 CDGMDATYKEFIEEGPIVYIGKV--DSLKAYAGRNRAMLEWQKLLDPRAKTAKIFWEN----------------R----T 77
gi 81443769   20 CESMDATYKDFVKDGPIMYLTRLskDSITVRNGWERVLISFPIVKDGRSTKIALALNQ----------------S----- 78
gi 255345435  21 CKKMDEVYKDFIVPGGLTYAGRV--TSPVIQSGRQRIKISWLRGADPNVNLARIFWNN----------------Y----K 78
gi 502417916  23 CEKMDATYKDFLNGGEIVYNGKP--ELLQVFSGNKRVKLKWYIVSDPKITSAKIYWNNpahiegepvipgqrpaG----R 96
gi 361062639  23 CSKMNATYEDFIKDGEVVYIAKV--DSVTAYPGNNRMALSMLLTSDPRISKVKVYWSA----------------G----G 80
gi 738783700   5 CKRMDSTYEKYVVPNGIIYPGKA--TSPSVKPGLNRIQISWARGTDPKVVKARIFWNN----------------Y----R 62
gi 503399972  23 CQKMDGIYEDFLEGGEIVYNGKA--EGLVAHPGINRMELKWYIISDPKIVKAKVFWINpvhiegeptlpnqraaG----K 96
gi 524576161  20 CKDQDDIYKQWVVPGGSVYPEKA--NGLNAKLGYKRIQLRWATPKDPSVTKAVITWDN----------------G----D 77
gi 524317914  16 CENMEDVHKKYIADGEIIYRVKP--TTIKSYSGYNQAKLTWNLVCPKLVTQCRIEENN---------------------- 71
gi 495861989  21 CTRSDEYYRDYLKNGEIYYPGRI--DSLSIIPGDRKAVLRFRMTTDPKIQTIKAFVRN----------------SlspnQ 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81443802   78 --RSTELQLT-DKA--GLTQVIVKDLAEGSYVFEVCTYDTHGNSSIMSEVPCTVYGDVYEKLL-FNTKVKTAVL---K-- 146
gi 81443769   79 --DTVRYELA-KNK---RTDILLENMREGSIIFSAWLEDDELNKSLATDFTGTIYGTQYQSYL-LNRSIVSKSM---Q-- 146
gi 255345435  79 --DSVNVPIP-ATG--DTISVIIGNLEEKPYTFVARTYDNKGNKSVPVELLAESFGDKYQSFL-VTRPVVQSEN---S-- 147
gi 502417916  97 --DSVVLAIQ-RGSgtDSVQTFIDRLKEGIYTFSVFMYDDKGHSSVKSEVIGDVYGDNYQASI-TNRPLDMPQL---Nil 169
gi 361062639  81 qtDSTEKAVQ-RTDnvDTVRFSFNKLAEGTYTFNIYSYDKAGHRSVKNDVIGTVYGDRYISQL-VNRAIKSSAY---S-- 153
gi 738783700  63 --DSVEVPVP---AdqDIISYTIPNLAENYYTFIIKTYDKDGRVSVPVEVSGDVWGERYRSTL-LNRLAVSSTI---Nl- 132
gi 503399972  97 --DSVTIDIV-RGAttDSVITLIDRLKEGVYTFSVVMYDKNGHSSISSQIIAEVYGSVFQGTI-SNRPLDVPLL---Dti 169
gi 524576161  78 --QTKELNYA-DYAgqDSIRLEIDQLKEQSYTFNIVNYDKEGNQSMQSENTASPYGDIWLATH-SERTIKSAEI---Ps- 149
gi 524317914  72 ---SLLAELHvVYEdtVRMECILNNLEEKTHTFSIYTLDAEGNTSLKSEIIVDVYGAKYEANLrTNISLKSVWRkadN-- 146
gi 495861989  83 --TVLTFPVT-QGDygKIKEYALDNLEEATYTIDIRTFASEKDSSRAVTASQFIYGQSYISTL-TNRSFLKFAG---P-- 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81443802  147 --N--DVLTITFAASLE-PTfF----------G-SEITYTSIDG-GDKTV---ILKA--P------------E------- 185
gi 81443769  147 --S--GNLVIKYSMLLD-STlV----------A-SRLTWNKGGE-ETTKI---SYYN--K------------E------- 185
gi 255345435 148 --G--TVLTINWSNANK-SGgA----------YvTEVEYTNTAN-VTAVK---RFSV--D------------E------- 187
gi 502417916 170 ngK--SDLYIPWYGVAQ-QA-V----------R-IDLIYTNTAG-QVKTVqkkKIPN--P------------Adarrgmi 219
gi 361062639 154 --DaaQTATIKWYGVGA--DvI----------G-QEILYTDNFG-AQQKF---YSKNegP------------A------- 195
gi 738783700 133 --A--NTLTIQFEPVLAgSTiV----------K-SEVEYTTTAG-ALKTV---TVLP--G------------T------- 172
gi 503399972 170 nkK--SNLYIPWYGISQ-QA-V----------K-IDLQYIDVSG-IARTK---RITK--VsnpidprrpmiwQ------- 221
gi 524576161 150 --G--TNANITLDFGTN-EM-V----------A-TKFRYLNNDGeWVVTD---PVPS--N------------V------- 188
gi 524317914 147 --S--NQVLIGLSEQSS-SKvV----------K-TRVYYKNVDG-KEAMQ---EVKT--G------------E------- 185
gi 495861989 154 --D--ATVNVPYAVFAR-EPnLprlgnfypmqF-TEVNYVTTIG-DTVTV---RITP--Y------------E------- 202
                        250       260       270
                 ....*....|....*....|....*....|....
gi 81443802  186 --TQIKIDDFA---GDRIIYRSVYLPEETAIDYF 214
gi 81443769  186 --GQDVLEDFT---GDSFIMETLYAPQENVLDKi 214
gi 255345435 188 --LSSVISDYKp--GTTYRYRTEYRPG-ASIDPF 216
gi 502417916 220 wlDRDTLFNFKdapGAKVRYRTAYLPEETAIDTF 253
gi 361062639 196 --DSTVLPVYKk--GSSLQFRTLYKPAPNAIDTF 225
gi 738783700 173 --LSLQLTDYKk--ETGYKLRTQHL-NPTAIDPF 201
gi 503399972 222 --DRDTVFNYKe--GTGFSYRTAYLPEPNAIDTF 251
gi 524576161 189 --ASVVLENAKv--GTRYEYASGYCPV-AGLDTi 217
gi 524317914 186 --KEIVLEQVAe--DSYFKLQDVYMPVENCIDEF 215
gi 495861989 203 --EVAQMGGIKn--PSIIKYRTVYKPTPTVIDYF 232
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