Conserved Protein Domain Family
DUF5004

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pfam16395: DUF5004 
Domain of unknown function (DUF5004)
This small family of proteins is functionally uncharacterized. This family is found in bacteroides. Proteins in this family are typically around 150 amino acids in length.
Statistics
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PSSM-Id: 318583
View PSSM: pfam16395
Aligned: 10 rows
Threshold Bit Score: 120.386
Threshold Setting Gi: 740914385
Created: 29-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81443020   25 KDeiaP---D---SY-----M-----EVPKQLDGKWQLKTVVRN-------------GTDISEVMD--FSQFRLIMNKDN 73
gi 918016229  46 EK---K---D---DGsyvapI-----TRYEKINGKWQLTNLTQTdelaka-tggtltQVALFSKFG--FKDLQMTFNVDA 108
gi 503799841  25 QG---NacpK---DFvg-alT-----GQEEQLVGTWVLSEITSEsaidltddeeqnpSTDLFEQYSecDRDASYIFDDDR 92
gi 503797929  22 tsddgvecaE---DFtg-dlS-----ANEQKLVGEWVLSGIVAVkeldltddntdnpSTDLFAQYAecKKDASYTFEEDR 92
gi 503760750  25 ND---I---EcpeDYtg-alA-----ASEEKMQGDWVLTGMMADtevdltddeednpIKDLFAQYEdcQKDASYTFGSDR 92
gi 361058732   6 tpmlcllgffackpellvapS-----EPVKNLTGSWQIIKATRN-------------GTDLTTRFN--FSQFRIHF-TDS 64
gi 524133473  20 cD---D---D---DYslgapS-----DKTKALIGTWNVKSVTLTdeag------tkkEMDITPYFN--FDSYKVTFNEDK 77
gi 502453781   2 kvsisfcllillfsinackrqeisvpEQIKDISGEWRIVKAVRN-------------GVEITTLTD--FTKFRIHF-KEG 65
gi 500937533  15 ffaiscdntE---DG-----SyvdpiTIYEKVNGNWGLTNLKMVdefakt-nkiepnEENLSTFFN--YEDFKINFSVDE 83
gi 740914385  24 kdemakivtD----------------ESVKDISGSWKVVQLTRN-------------GEDLGKRMD--LANFKINFKSDG 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81443020   74 TYNIENY-----LPFLVKKNGTWRIDNLTypFFLT-----FQEEGAEREAITEITYPIVQGKRHIT----LTISPGCSSN 139
gi 918016229 109 QGEPTSYsvsgtAPELFAKSGFWSMDSPF--TTGKtakmyLYADEAKSQKTDELEVTTVPGATNVLelrlVRSSEGTPFL 186
gi 503799841  93 TYRYDLGqrvgdCDYPITATGSWKFSAQI--LSLTstcsiQTAPLKLNAEGDTFTFS------EVYklkdVHGTIIQTKI 164
gi 503797929  93 SYAYELGkyvedCEYVVASTGTWELASQN--LSLVsscslQTTTLEFNEDSSQFTFS------EIYsvteVTGTVVQTRI 164
gi 503760750  93 SYTYKQShvaedCDNKATLSGTWKLTGEV--LSLVgacivQNISLNIKDDASEFSFT------DTFniqdIDGKVVQAKV 164
gi 361058732  65 SYTIDSL-----VPFIVNHNGKWSFDDPIypFKLS------FQATDSSARTSPLQYPVTDGQRNLI----ITFSPGCSLN 129
gi 524133473  78 SFSIESSsmt--pnFVGLLSGTWSYDDAEapLLIN---------LTEGTVSSQFTLAAPPREGTNLrikfIRKSEDKAIV 146
gi 502453781  66 QYNIENP-----MPFVVNKNGSYSLDDPAypLRIS-----FLQTGTDAAVSTGFTYPVVNGKRNMV----FSFSPGCASN 131
gi 500937533  84 KNRPTSYevtgnVPPLFALKGYWELSSDFqqTNASavkiyLYSDAQKTQKTDELRLSSVPGKSGEMefqlVRSSEGTAFL 163
gi 740914385  73 TYTLADQ-----LPFIVDVPGKYVFNDPQypFSLI-----LTPEDEKKDIALKFQFPVIAGERQLS----LTFSLGCSSN 138

                 ....*..
gi 81443020  140 SYVYSFE 146
gi 918016229 187 SYQFSLK 193
gi 503799841 165 VFTYSLA 171
gi 503797929 165 DFTYSLI 171
gi 503760750 165 TFTYTAQ 171
gi 361058732 130 TYQYTLQ 136
gi 524133473 147 SYRYELT 153
gi 502453781 132 TYLYTLE 138
gi 500937533 164 TYVFKLN 170
gi 740914385 139 IYQFNFE 145
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