Conserved Protein Domain Family
DUF5021

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pfam16424: DUF5021 
Domain of unknown function (DUF5021)
This family consists of Prepilin-type cleavage/methylation N-terminal domain proteins around 200 residues in length and is mainly found in various Eubacterium species. The function of this family is unknown.
Statistics
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PSSM-Id: 318605
View PSSM: pfam16424
Aligned: 3 rows
Threshold Bit Score: 214.55
Threshold Setting Gi: 524036180
Created: 30-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291531828  46 VTSANSTAASIKKQIDNFLTDADTAgy-gMKQSSAAKANITFKINaDGEWeasvvtgtytggaaggaltdafktggSIQW 124
gi 524036180  43 IASSNHLAKTIRDRTAEFLTKLDTQ----MDTHVGGAETVVIKVD-NGVW--------------------------TLTG 91
gi 291531826  45 IGSANSTASEIKKQIGYFLTMADANrknyMLMGEDCREVFTLTVS-DGNWhidaaqn------------psafspdTVTW 111
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291531828 125 GASAADITK----------DTPKSSAGDATALLTiDLASVFPDVKSSYIYAYCEGGKTLYVAYTADGNTKPTSMPGEADF 194
gi 524036180  92 GSSEDWIDKvnhwntlpqvTTSDAGSKRDTELLS-YLAVVTQGMGTAYIELHVEYSHVIGVALIQGASQPAYVMPSLQDM 170
gi 291531826 112 G-NAADVDE----------STTITSSQYGEELLGmYLKNCFPELRNGVIRANCIKGVCVSVWYT----------PDTTDI 170
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 291531828 195 KK-------GT--------------YTWDGN-TAGITSDGITLGTAPA 220
gi 524036180 171 RD-------GV--------------FDFDGSdKAGRLGDGTVLGTSPI 197
gi 291531826 171 SDindvpqfGTtvawvdengdeitkYRWDGT-TAGVSADGYTIGTAPM 217
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