Conserved Protein Domain Family
Cyclin_N2

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pfam16500: Cyclin_N2 
N-terminal region of cyclin_N
Cyclin_N2 is fond upstream of the family Cyclin_N, pfam00134. The exact function of this region of cyclins is not certain.
Statistics
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PSSM-Id: 318660
View PSSM: pfam16500
Aligned: 14 rows
Threshold Bit Score: 137.564
Threshold Setting Gi: 224049205
Created: 29-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82237226   33 ENRENVNPNP-K-AANN-------RTvlgELEN-NQRRQL---------------G-LRGAKQGsGp---QIIAC-KPEE 82
gi 341940328  22 EDQENVNPEKlA-PAQQpr----aQA---VLKAgNVRGPAp-------------qQ-KLKTRRV-Ap--lKDLPI-NDEH 75
gi 573882155  35 EDQENINPKat------------sRSvlgALQN-NQRSARp--------------QlQQGTKQGhSc---QVLSCtNSEN 84
gi 557013635  35 ENQENVNPKF-LaGAAAapp--paRTvlgVLQN-SHSGRL---------------Q-RGASKQQqAvsvqEFSSI-KNEN 93
gi 348511866  37 ENQENLPPKQ----AAN-------RTvlgALQN-NQRNK----------------S-QVGGKQDsT----QSLSC-KNED 82
gi 941783653  36 ENLENLPPKQ----AAN-------RTvlgALQN-NHRSKVq--------------N-QRGVKQEsS----QPFFC-KTED 83
gi 348582626  24 EDQENINPEKaA-PAQQpr----pHAgvtVLKAgNSRCSAp-------------qQ-RLKTRRV-Ap--lKDLPV-NDEN 80
gi 511847310  28 EDQENINPEKaA-PAQQpr----tRAglaVLKAgNPRVPAp-------------qQ-RPKTRRV-Ap--lKDLPV-NDEH 84
gi 224049205   6 ENQENVPPPAaG-KAAAappaagtRValgLLHGaQQRAGIpl-----------qaA-RGGC-----------------EG 55
gi 612028890  27 ENQENIQPDKrG-GGAEpa---rtRTvlgVLRA-NVRAPApgpapglgpaaglapH-KSKNRRVaAp--lRDVPL-HDEP 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82237226   83 NaRSFGERPSNRQPaAFQIHVDEPDGaCSKK------APLQRSTMDCSPLTLNPTVTr--LRQPLATIDLP--LEASFDS 152
gi 341940328  76 VtAGPSWKAVSKQP-AFTIHVDEAEE-TQKR------PAELKETECEDALAFNAAVSlpgARKPLTPLDYP--MDGSFES 145
gi 573882155  85 HgRDPSEKMGAKQP-GFTIHVDEPDGaCTKKq----vASKAKVLMEKPLLTINP-IAg--NRQPLSVIECP--LDASFDS 154
gi 557013635  94 SdRDCVRKTGGKPS-AFTIHVDEPDGgSCKGq-----NVPKKVEPKENLLALNPAITslrNRLPLAPIECP--MDLSYDS 165
gi 348511866  83 FgKSCFDKPLAKQP-AFQIHIDEPDGaCIKKpqqaveSIKAKPTVEESPLAI-NAVAr--LRQPLATIEIPsaMDVSFDS 158
gi 941783653  84 VaRSNIEKPPTRQP-AFQIHVDEPDKaPTKGa----eAIKLKPTVEESPLTISNAVVr--LRQPLATIDIPssMDVSFDS 156
gi 348582626  81 VaALPPWKASSKQP-AFTIHVDEAEEnTQER------PTEFKKPECEDVLAFNTAVAlpgPRKPLVPLDYP--MDGSFDS 151
gi 511847310  85 V-TVPPWKANSKQP-AFTIHVDEAEQeTQKR------PAEPKKTEHENVLAFNSAITlpgPRKPLVPLDYP--MDGSFES 154
gi 224049205  56 HgAAAGLQQHQHQP--FSIHVDEPDGeRAPRr----qRGVPAGQKEEVALGLRTAVCvlgERRPLAPLSNA--LELSFDS 127
gi 612028890  98 G-IVPAWNAPSKQP-AFTIHVDEPEGeTGKK------LPGPKKGESEDLLGFNSAVSl-pERKPLGPLDYP--MDGSFES 166

                 ....*..
gi 82237226  153 P--MDMS 157
gi 341940328 146 PhaMDMS 152
gi 573882155 155 PvaMDMS 161
gi 557013635 166 PmvLDvl 172
gi 348511866 159 P--MDMS 163
gi 941783653 157 P--MDMS 161
gi 348582626 152 QhtMDMS 158
gi 511847310 155 PhtMDIS 161
gi 224049205 128 PsiMDIS 134
gi 612028890 167 PltMDMS 173
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