Conserved Protein Domain Family
APC_u5

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pfam16630: APC_u5 
Unstructured region on APC between 1st and 2nd catenin-bdg motifs
APC_u5 is a short region of natively unstructured sequence lying between the first and the second 15-residue beta-catenin binding motifs, APC_15aa, pfam05972, on APC or adenomatous polyposis coli proteins in higher eukaryotes. The function is not known.
Statistics
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PSSM-Id: 318771
View PSSM: pfam16630
Aligned: 8 rows
Threshold Bit Score: 153.15
Threshold Setting Gi: 301613942
Created: 30-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 972955125  1018 LNSGRQSPSQNERWARPKHLVEDEMKRNDQKSVRSQNQAYQMYTES---TsdsEEKHMKYQSRFVQPECPGGF-R-RSSn 1092
gi 221040078  1018 LNSGRQSPSQNERWARPKHIIEDEIKQSEQRQSRNQSTTYPVYTES---T---DDKHLKFQPHFGQQECVSPY-RsRGAn 1090
gi 1023020942 1001 LNSGRQSPSQNDRWARPKHVIEDEIKQNEQRQARGQNTPFSAYSES---T---DDKHMKFQSRFGQQECVSPY-RsRGAs 1073
gi 528491243  1004 LNSGRQSPSQNERWARPK-LLDDEMKRPDQKPPRSQSPGYPMYTEGsseG---EDKPKKYQPRFVQQDL-PAF-RsRGSn 1077
gi 992211941   983 LNSGRQSPSQNERWARPK-TLEEEIKRSEQKPPRSQSPGYPMYPEGnteS---EDKRKKFQPRFVQQDMSGGF-RqRGPn 1057
gi 301613942  1036 LNSGRQSPSQNERWARPKHIIDSEMKQSEQRQPRTTKTTYSSYTEN---K---EEKHKKFPPHFNQPENAPAYaRsRGTn 1109
gi 637318253  1035 LNSGRQSPSQNERWARPKHIIEEEIKQSEQRQSRSQSGAYPVYTEG---G---DNKHLSYPSAFGQPECVSPF-RsRDSs 1107
gi 513231342  1024 LNSGRQSPSQNERWARPKHIIDDEMKQNDQRQSRSQSATYPVYTES---G---DDKHMKYQSPFGQQDCVPSF-RsRGSn 1096
                           90       100
                   ....*....|....*....|....*...
gi 972955125  1093 -sSEQSRGSSSHGMNKKISQPMCPVDDY 1119
gi 221040078  1091 -gSETNRVGSNHGINQNVSQSLCQEDDY 1117
gi 1023020942 1074 -gSEQNRVSSGHGINQKVNQSLCHEDDY 1100
gi 528491243  1078 ---EQISSGSSHGLNKKISQTICSVDDY 1102
gi 992211941  1058 ---EQSSSGSSHGMTKKISQTICTVDDF 1082
gi 301613942  1110 nqADQSRVGSNLSNNSKASKPHCQVDDY 1137
gi 637318253  1108 -tSEQNRTGCSHGINQKVNQSLRQVDDY 1134
gi 513231342  1097 -gSDQNRVGSTLGINQKVNQSLCQVDDY 1123
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