Conserved Protein Domain Family
Caskin-tail

?
pfam16632: Caskin-tail 
C-terminal region of Caskin
This region is found at the C-terminus of Caskin proteins. Caskins are CASK-binding synaptic scaffolding proteins. Part of this region is predicted to be in coiled-coil conformation. Its function is not known.
Statistics
?
PSSM-Id: 318773
View PSSM: pfam16632
Aligned: 15 rows
Threshold Bit Score: 85.161
Threshold Setting Gi: 725577445
Created: 31-Jul-2016
Updated: 4-Aug-2016
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 835982033 1012 QHRLEETSASLAAALEAVEHQIKEEDTQNDs---lSGKKATVSILDDIGSMFDDLADQLDAMLD 1072
gi 47213676   286 QQRLDQTSWSLAAALKAVESKLSQEEDSSR-----NAVTSARTILDDIGNMFDDLADQLDAMLD 344
gi 637267683 1421 QQRLEQTNSSLASTLEAAEKKISAEKSDSSry---gtAHTAKNILEDISNMFDDLAEQLDAMLD 1481
gi 525017002 1413 QQRQEQSSSSLAATLQAAEKKIMVEETESHpg----tMHSAKNILEDISNMFDDLADQLDAMLD 1472
gi 874452584 1271 QQRLEHTNCSLAAALQAAEKKITAEEVESPpg--aVHSHSAKNILEDISNMFDDLADQLDAMLD 1332
gi 733915481 1349 QQRLEHTSIT---TVQAAEKKITVEEVQSPpg----aTHLAKNILEDISNMFDDLADQLDAMLD 1405
gi 344292200 1365 RQKLEQTSACLAAALQAVEEKIRQEDSQGPrp-saAEDKSTGSILDDIGSMFDDLADQLDAMLE 1427
gi 688543868 1487 HQKIEETSASLAAALQAVEQKIKEDGQKDSi----AENKSTVSILDDIGSMFDDLADQLDAMLE 1546
gi 542182893 1190 QQRLDQTSTSLAAALKDVERKLTVENSPDSg---aNQVRSAGTILDDIGNMFDDLADQLDAMLD 1250
gi 961913244 1409 QKRLEQTSTSLEAALKVVENELAHGSSVDGcssssSSVKAAGNILDDIGNMFDDLAVQLDAMLE 1472
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap