Conserved Protein Domain Family
APC_u15

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pfam16636: APC_u15 
Unstructured region on APC between APC_crr regions 5 and 6
APC_u15 is a short region of natively unstructured sequence lying between the fifth and sixth creatine-rich, APC_crr, pfam05923, domains on APC or adenomatous polyposis coli proteins in higher eukaryotes. The function is not known.
Statistics
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PSSM-Id: 318777
View PSSM: pfam16636
Aligned: 9 rows
Threshold Bit Score: 76.8484
Threshold Setting Gi: 573877657
Created: 30-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74209129     33 DDDVDLSREKAELRKGKEskdSEAKVTCRPEPNSSQQAASKSQASIKH-PANRAQSKPVLQKQPTFPQSSKDGPDRGAAT 111
gi 637318253  1869 DDDVDLSREKAELRKGKE---SEIKSNSNTEQISNHQSTSRIQTCQKHsPAVRNQPKSLIQKQTSFSQSSKDIVDRIAAT 1945
gi 395514172  1774 dddvdlsREKAEL-KGKEakeTETKVNNHIELTSNQQPSNRTQICTKQ-PIDRNQSKPLLQKQSTFPQPSKDLPDRGAAT 1851
gi 149642301  1874 dddvdlsREKAELRKGKEtkeADANASSHPE-----PSTNRTQICPKP-PPSRGQPKTSLQKPAAFPQPSKDIPDRGAAS 1947
gi 301613942  1870 DDDIDLSKEKAELRKEKGtkdTDRKGKYKNENPAINQIGKQEQVGPKS-LEGRGQPKALVHKPTSFCPAAKGTQDRGGAk 1948
gi 573877657  1866 DDELDFSKEKAELKKEKEqkkASTKNT--IEQPSSYPSTGRTQMFHRP-SPNRPPAKPLLQKQATFPQTSKET------T 1936
gi 752402459  1831 DDDVDLSREKAELRKGKEnkeSEAKVTSHTELTSNQQSANKTQAVTKH-PINRGQSKPMLQKQSTFPQSSKDIPDRGAAT 1909
gi 1020933658 1877 DDDVDLSREKAELRKGKEgkeTEIKECSTAAQSSNQQPSNRTQACQKH-PAGRSQTK-------TFSQSAKDIPDRGAAT 1948
gi 874492425  1899 DDDVDLSREKAELRKGKEakeIEAKDCANAEQASNQQSTNRTQVCQKH-PTSRSQPK-------SFCQSTKDIPDRGAAT 1970
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