3R08,1XIW


Conserved Protein Domain Family
Ig_5

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pfam16681: Ig_5 
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Ig-like domain on T-cell surface glycoprotein CD3 epsilon chain
Ig_5 is an immunoglobulin domain found on T-cell surface glycoprotein CD3 epsilon chain. It forms a first-order complex with T-cell surface glycoprotein CD3 delta chain as part of the T-cell receptor complex.
Statistics
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PSSM-Id: 318816
View PSSM: pfam16681
Aligned: 22 rows
Threshold Bit Score: 97.7512
Threshold Setting Gi: 637365666
Created: 30-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3R08_E         8 YKVSISGTSVELTCPLDS-D-ENLKWEKN---------GQELP--------Q-K--HDKHLVLQDFSEVEDSGYYVCYTP 65
gi 395848528  36 YKVSISGTTVTVKCPLDT-E-HDINWAKK---------DQELK--------DyK--NQEDLILDNFSEMENSGYYACYTG 94
gi 532085309  36 YKVSISGTDVILSCPPKTlQ-GTINWERN---------DGKLE--------G-E--NDEQLLLKNFSEMDDSGYYACYTL 94
gi 884923463  36 YEVSISRSTVTVTCYLNP-E-EPIEWKKD---------NKVIP--------N-E--NNRELIIESFSELEDSGYYTCAKS 93
gi 225021     36 YKVSISGTTVILTCPQYP-G-SEILWQHN---------DKNIGgdeddkniG-S--DEDHLSLKEFSELEQSGYYVCYPR 101
gi 612020701  33 FGVSISGTQVTLTCPEKS-E-DLIIWKKN---------NVLIN--------G-V--ESYQLTLDD-SETEYSGHFHCKKK 89
gi 821473513  33 FGVYISGTEVTLTCPEKT-N-EEIIWKKN---------DLTIN--------G-V--DTDTLTLKD-SETEYRGHFFCKKK 89
gi 556952235  35 ptVEVSGTTVTLTCP----T-DYIKWKKD---------DKELP--------K-ElsEANKLEIKNFND-DNNGYYGCSKE 90
gi 351705855  31 YRVSISGTRVVVTCFLDP-StDPIKWEKI---------DGEES--------G-E--NDEQLIIENFSEVEHSGYYACYKS 89
1XIW_A        15 YKVSISGTTVILTCPQYP-G-SEILWQHNdkniggdedDKNIG--------S----DEDHLSLKEFSELEQSGYYVCYPR 80
                         90       100
                 ....*....|....*....|....*
3R08_E        66 AS-N---K--N--TYLYLKARVSEY 82
gi 395848528  95 NK-D---Di-S--HYLYLRARVCEN 112
gi 532085309  95 PK-Q---KenI--HYLYLRARVCEN 113
gi 884923463  94 SS-E---K-----VYLYLKARVCEN 109
gi 225021    102 GS-KpedA--N--FYLYLRARVCEN 121
gi 612020701  90 SS-Ps-dE--G--YFLYLKARVCHG 108
gi 821473513  90 SG-S---D--TegYFLYLKARVCDG 108
gi 556952235  91 SS--------N--HTIYVKAKVCEN 105
gi 351705855  90 DS-E---K--N--HYLYLKARVCEN 106
1XIW_A        81 GSkP---EdaN--FYLYLRARVCEN 100
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