4GKQ,2O0A


Conserved Protein Domain Family
Microtub_bd

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pfam16796: Microtub_bd 
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Microtubule binding
This motor homology domain binds microtubules and lacks an ATP-binding site.
Statistics
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PSSM-Id: 318905
View PSSM: pfam16796
Aligned: 49 rows
Threshold Bit Score: 122.293
Threshold Setting Gi: 366993212
Created: 30-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
4GKQ_A         5 LGEELSRRRRLLNSITELKGCARLFANIIEDEISeK-LIVNYSdesi------------------------edmKNHKTY 59
gi 74693165  358 MEDEQLSRRRIENTIEELRGNIRVFAYVSDASVP-Y--TIDYAskt-------------------------itvGSAKQY 409
2O0A_A         5 VEKELLRSRRLENSIIEQKGTMRCYAYVMEQNLPeN-LLFDYEngvi------------------------tqgLSEHVY 59
gi 367009490 349 MEEEQLRRRKLENTIEELKGGIRTFAYITKKGQDdN-LGVNYSertl------------------------tdlQNGQIF 403
gi 254579833 345 MEQEQLRRRKLENSIDEMKGQIRRFAYVTGEFQD---CEVDYAkrcv-----------------------------ddtY 392
gi 367004222 364 VEEEQLRRKKLENSIDELKGTIRCVAYYSTTELQdA-YSIDIPshtitsidvagnennlnlkfsdnvnkkdevkSLPNMY 442
gi 156848945 358 MEQEQIRRRKLENSIDELKGSIRCFAYLSESTLTeS-YKIDYSkktiesv-----------------dldsknnAVAKSY 419
gi 365990095 385 LRQERMTRKRLENIVDETNCKIRCFAFIDENKLSeRnFQIDYMnrti-----------------------tipgKRNNPL 441
gi 366993212 340 MIFEKITRRKLENTIDERRGSVRCFAYIDKETLPsS-YRINYTdrri------------------------sniHTNESF 394
gi 366995161 323 MEFECIRRKKLENSIDELKGFIRCFATISEEGIPsN-IHVKYTsnci------------------------cndDNGREY 377
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
4GKQ_A        60 KFTKLIQNFShqNKDLFKEDLHVYIDFCLkRRENFNLFSVGS---SNIPNTFEKLLAFFKNN---YFDKFVITLQYVMLS 133
gi 74693165  410 CFDRLIPKELvpLQELLEQECQAYMDMCLqNQYDSSVISLQQ---ENDHSIRNTFIGWMLSQ-----KHKRINFQCVVLS 481
2O0A_A        60 KFNRVIPHLKvsEDKFFTQEYSVYHDMCLnQKKNFNLISLST---TPHGSLRESLIKFLAEKdtiYQKQYVITLQFVFLS 136
gi 367009490 404 QFSRIIPSELetENDLLYQDCEMYHEMCLkNRLNYNLISVSQ---KPWDALRIALLEFIYTK---CHDQFRIYLQYVFLS 477
gi 254579833 393 SFNRIVPSILmdEKEMLFQEYEMYHDMCLgRGINFNLISVSS---KPWTSLRFALLNFLCDK---CLPHYHIDLQYVFLS 466
gi 367004222 443 EFNRVIPSELieESMMLCDEYQCYHDMCLeNRTNFNLISVSA---SPWNKLRKAVFQLLIPK---YLEKYNISLQSVFLS 516
gi 156848945 420 SFTRLIPSTLlsEDDLLFQEYQCYHDMCLeNKSNFNLISVGT---FPWANLVTALTKFLFPK---YLHDYNISLQHVFLS 493
gi 365990095 442 FINKIIPINKmsESDFLLQDYQMYYDLKInKKTDFSLFTISNnngDTWDSLRYEMLRFMSINy----pSYTTLIQHVFIA 517
gi 366993212 395 FLNKIIEKQNctIEEFFHNELRVYQDMCLtKNMDFTLITISK---NEL--WRSNLISFISST---YLAHYHVDMQHVFIE 466
gi 366995161 378 PFTRLIPSIDiqEKKFLFQEYRIYQDMCLkNFENHNLISVSN---KQWHELRESLIKFIISN---YKADYEMTFQFVFLS 451
                        170
                 ....*....|.
4GKQ_A       134 DNa--DSQDLL 142
gi 74693165  482 ENs--PSVDLL 490
2O0A_A       137 DDe--FSQDML 145
gi 367009490 478 EDs--PSQDLM 486
gi 254579833 467 EEm--PSQDML 475
gi 367004222 517 EEv--YSQDLL 525
gi 156848945 494 EDv--PSQDLL 502
gi 365990095 518 ND---SVTDIL 525
gi 366993212 467 DNewvTVHDMI 477
gi 366995161 452 DDa--ISQDYL 460
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