4KNC


Conserved Protein Domain Family
CBM_26

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pfam16824: CBM_26 
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C-terminal carbohydrate-binding module
CBM_26 is a family of bacterial carbohydrate-binding modules frequently found at the C-terminus of enzymes. The combination is not unusual as the CBMs function to bring the relevant polysaccharide into close proximity to the active site.
Statistics
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PSSM-Id: 318924
View PSSM: pfam16824
Aligned: 8 rows
Threshold Bit Score: 223.528
Threshold Setting Gi: 489335881
Created: 30-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
4KNC_B       320 GCSGRKTVLSRKVKLRQGR--NEVLLN---SAALPIRSGSYVADVTYSDPSVHELKNTIWYMNGRREQLKIEQSKAVDTG 394
gi 33300969  348 GCDDRPALMSASTTLKPGK--NELMVNgkgGVIKDLINRNLQMDVKFEDPSVKVLQATLWYLNGRHEDIKLEKPETSDTD 425
gi 123657909 355 GCEGKDAQMTGSTTLKPGK--NELLVNs-kN--MDLRNSGHQVDIRFADTSVKTLQATLWYMNGRHEDIKIEKPETSDTD 429
gi 33300957  346 GCEGKPAVMSASTTLKPGN--NEVLVNg-kNGIKDIRNGSNQIDIRFDDTSVKTLQARLWYMNGRHEDLKIEKPETSDTD 422
gi 33300907  348 ACEGEKTLLAGKATLRPGEagKEVLINg-aGRLVEATNSRHQVDIRFSDPSVKKLEGTIWYMTGRREKFQFDKPVTTETN 426
gi 512733253 342 GCEGRPVALKAKAKLHPGA--NEVLVNgkgSAPRDLRGRDYQVDLTFSDPSVHEAKATIWYLNGRRENFKLEQSDRVDTG 419
gi 489335881 343 GCSGQNQVLSKETRLRPGS--NEVLVNg-eNNLLTLAGNRHQLDLQFSDPSVKRVDATIWYLNGRREQLKLEKPHTVDTD 419
gi 754068231 345 GCADGKPALSRKIKLHPGR--NEVLVN---SGALPIRSGSYTADVTYSDPGVHELKNTIWYMNGRREQLKIEQSKAVDTG 419
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
4KNC_B       395 GRYVFQLRNDSDWADQQFLSLEIEAPEDMPqgLEVQASICQA-----APAK 440
gi 33300969  426 GRFVFQMREDEDWASQRLLAFEVQGPESGT--QKVEAKLCKRnnfavPAQT 474
gi 123657909 430 GRFAFELRTDEDWASQNLLAVEIQGPEAGTagQKVEAKICKRnvfpsAEQR 480
gi 33300957  423 GRFAFELREDEDWADQQLLALEIQGPEAGTapQKVAAKVCKRnvfpsAAKH 473
gi 33300907  427 GRFAFNMRDEADWGGLNFFAMEIQPPEGLKepVEVEVRLCKRhdyhaPANL 477
gi 512733253 420 GRYVFELRNDPDWADLNLLALEIHSPEQMPqdLSVEVSLCKRpskggedlt 470
gi 489335881 420 GRFAVELRDEPGWGEQNFFALEIEKPEDSAddLKVQASLCQR-----PNDA 465
gi 754068231 420 GRYVFELRNDEDWSNQQFLSLEIEAPEDMPagLEVEAKLCQT-----PKAK 465
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