Conserved Protein Domain Family
Caskin-Pro-rich

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pfam16907: Caskin-Pro-rich 
Proline rich region of Caskin proteins
This proline rich region is found in Caskin proteins. Caskins are CASK-binding synaptic scaffolding proteins. This region is predicted to be natively unstructured. Its function is not known.
Statistics
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PSSM-Id: 318995
View PSSM: pfam16907
Aligned: 14 rows
Threshold Bit Score: 77.1349
Threshold Setting Gi: 908441015
Created: 31-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 908441015  955 QNKRAHTLNRYAVSDSECDERAGGRgggggegeadvvsqsstavR-G---------EGGK-----YATVTHRVSRSHSVR 1019
gi 941804980  851 QNKRSQSLNRYALSDGEPDEDDDLPl-----------------pS-Ssas----svTMPP-----YATLSRRPGRAsg-- 901
gi 765153092  850 QKKRTQSLTRYALSDGEPDEDEDPAl-----------------sR-S---------SASPsampsYATLSRRTPRApa-- 900
gi 47213674   903 PKSRAQSLTRYALSDGEPEEDEEEPa-----------------lPpA---------HLSS-----YATLTRKPGRSQLAR 951
gi 565318169  285 PKKRAHSLNRYAMSDSEQERDELM--------------------V-P---------DAGP-----YATVQRRVGRSHSVR 329
gi 992182784  627 PKKRTQSLTRYALSDGEPDEEDDDElaq--------------pmA-A---------ALPS-----YATLSRRPARGQLAR 677
gi 768917045  924 QKKRAHSLNRYAVSDGECDEPVSGRngge------------apvA-GgqssavpkaEGGK-----YATVTHRVSRSHSVR 985
gi 992187894  352 PKKRAHSLNRYAVSDGEQEREELNV-------------------Q-D---------TGGK-----YATVQHRVGRSNSMK 397
gi 637267696  872 HKKRSHSLNRYALSDGETEEEEPP--------------------S-N---------TVGS-----YATLTRRPGRSQVPR 916
gi 971425134  875 NKKRSHSLNRYALSDGEHEEEEGMP-------------------T-S---------TLGS-----YATLTRRPGRSQMPR 920
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 908441015 1020 NQ---EK-GANRnqSQSFALRQKKKGPPPPPPKRSSSAISTSNSN 1060
gi 941804980  902 ----pPR-QVNR--SHSFAVRSRHKGPPPPPPKRMSSVSGSPTRQ 939
gi 765153092  901 ----tQR-HINR--SHSFAVRSRHKGPPPPPPKRMSSVCSSPSHQ 938
gi 47213674   952 LKsspEK-NVGR--SQSFAVRARKKGPPPPPPKRLssvssstsg- 992
gi 565318169  330 AQsgaDK-NVNR--SQSFAVRPKKKGPPPPPPKRSSSAISSNNMa 371
gi 992182784  678 LQsapEQ-GVGR--SHSFAIRARRKGPPPPPPKRLssvssgntss 719
gi 768917045  986 NQ---DK-NISRnqTQSFALRQKKKGPPPPPPKRSSSAISSSNSN 1026
gi 992187894  398 GQa--DK-NVNR--SQSFALRQKKKGPPPPPPKRSSSAISSSSSN 437
gi 637267696  917 AQqmpADgKVSR--SQSFAIRARKKGPPPPPPKRLSSVSSAQAVD 959
gi 971425134  921 AClqtEA-KVTR--SQSFAIRAKRKGPPPPPPKRLSSVSSTLTTE 962
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