Conserved Protein Domain Family
ABC_export

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pfam16962: ABC_export 
Putative ABC exporter
This is a family of putative ABC_exporters from Firmicutes.
Statistics
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PSSM-Id: 319035
View PSSM: pfam16962
Aligned: 32 rows
Threshold Bit Score: 228.284
Threshold Setting Gi: 81663229
Created: 29-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81663229   19 L-------LKTAFRQLFRHLKSPSGAFVGLLVLGTVGMGLMPMIVATYTGSLdqiq-------------------mystV 72
gi 503546814  10 lyalffldFTKFKNYIKDAIHHPGKLVGLLIQYGLQFVWILPVIFFNSDEPRavwal------------------gldvV 71
gi 504587062   4 IkllfrkdLLILINNIKLILKNPLRLLTYVFVLGYFSFFYFRRTKKSSESLQevdleqlqevtnaidvipdakiyaklaV 83
gi 501537898  10 FralyfldSTKYKNYVIDAIHHPAKLAGLVVQYGLQFIWILPFLFKRSDPLEspwyl------------------sldvI 71
gi 524719186   1 MkalvylyYLRIKGIVRSMFSKVSTAIFTCVMLLIYGGLFIIMLNNGAQSIYaada--------------------itmS 60
gi 489111222   1 MnsffylfRTKIKGSVRVQFSSLGTGMAVIFTVLIYGILIGTIFTSSVPYDKetmy--------------------lqaA 60
gi 495474583   4 irlllrkdllilVNNLKLILRNPLRLLPYAGLLAYFFFIYTMRMRNREDQPLqspdleglp----------svdfamqnL 73
gi 769120680   1 MsilyklyLTRMKANIRHVFSRKGSAIFAILMMLLYGGLIVMSLSKPEIALSmqni--------------------tdaN 60
gi 524159985   5 MkpllklwLLKIKGTIRNLFKRKASGVFVIIMILFYGAMIVSLFNVDAGQimavn--------------------nidlH 64
gi 489869982   1 MvtllklsLLKRFAKIRNIFSKPTSALFTLGAILLYGSMFIPMFRHEGKAimal----------------------elmQ 58
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81663229   73 TSTIPLMMLVIVAMAIYF-DIGQQITELRPPELQFVLAGPFTNHQILSYRLMTLALTWVVSS-SlMAIFALPSAGSylsa 150
gi 503546814  72 GAVIMAMLMLIFFAGMNKaSVKYAPGQYSMADVSFLFPSPISQRTVYAWSMLRQIGSSLYMM-L-LVIIYLPFISSlt-- 147
gi 504587062  84 IGGLTLIALGILIFQLYR-ATKKNISFFSMADVNMLFTAPVSPSSILIYYLVRSILPILGGSiL-FTLYASAQVVDql-- 159
gi 501537898  72 GSVIMALLLLIFLGGLNKaSVSYAPGTYTMADANLLFPSPINQRSVYAWSMIRQFWSSLYTT-V-LAIIYLPLFGRml-- 147
gi 524719186  61 MAVLIGIGCTAFMVITML--LQKRKALFMEPDAFYLFTGPFPRTSIMRFIMLQSLVSSLLCG-A-LSIFMLVILMSgv-- 134
gi 489111222  61 TAILAGIGVTAFFSMLSL--MSKRKALLYDTDAFYFFSGPYTKTQTNLFILVQTLKGALGYG-L-IGCFFMGLLSMgg-- 134
gi 495474583  74 IGGFTLLALIFFIYQLYR-ATKSNVSFFKMADVNLLFTAPVKPENILIYYMARSFLPALGGSiL-FIIYGAGQVADkl-- 149
gi 769120680  61 MAIMIGVGFTALMVGVML--LQKRKALFMEADAFYLFSGPFTRVQTMRFLMLQNIASAFLCG-A-VSLLMVILLGSti-- 134
gi 524159985  65 MGILLLIGFQAIMLFATL--MQSKKALFTGEDAFYLFTGPFTRRQVMSYLTFQTIIQAFLLA-L-ISLVFLAAFSGga-- 138
gi 489869982  59 AYIMIVLGISAFFMLSMV--LSKHQSLFFLEDSYFMFIGPFNRKQILSLLPFENIWGSMLLA-L------LASFLSaf-- 127
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81663229  151 vlaiYTGGMTVTA-LTTLHAFSkpLLASWVRTL----------------IASAL-LG-AvaLLL---------------- 195
gi 503546814 148 ---gLHMDASKLV-YSSVTIIVisILGSALNFFiysish----rfgmgkIIKLS-IR-Lv-TVSllaytawgtftadn-- 214
gi 504587062 160 ---dLEVSQLIVM-GFGLALFV--FILFPIKFLiytlhtk---ygimgyIQKGV-FAfGi-ILLlmmvipglmadkf--- 225
gi 501537898 148 ---nLPMNHIRLV-YSGLTIMVlsILVSSLNFFvfsiah----rfnigrLIKRF-IK-Vl-IIAvlayvawgmlsgdn-- 214
gi 524719186 135 ---aFDFWFLGMC-FIGHTLVYmfFLVLYYYLYllsike-----kkyqhLSWYI-LA-If-LLFvavavigifiqngc-t 201
gi 489111222 135 ---yFSIP------YFLLCLLVlfLISSIFLLMtdyiymwt-lvkpkakIWNYI-AV-Il-VLAsagavffismqaagyd 201
gi 495474583 150 ---eLTAVNITFL-MLGFALFf--FMVSPLRFLiytlhtk---ygvmsyIKNGIvIL-Gg-TLTlmivipgllaekf--- 215
gi 769120680 135 ---eLSFPFLLIA-FLCFSLVYfvFLVVYYYVYllsiqk-----dsyrhIPAIA-AL-Ly-VLMvaavygmvvlqndf-a 201
gi 524159985 139 ---gFNFI------FIVLAYLAsiITVLFFLLLtdylyvlsigdkkyrkYSKII-PG-I--IIAfvviivlvlylqtg-n 204
gi 489869982 128 ---qFSLHFVMPIqLVLITFLMntLLISAFSLImewfylkgiihktkskGPRIF-FA-F--IIVstliilgaqfyqngfd 200
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81663229  196 -------------ISSLPLgmsdngFSWQTWLlscqaspigsimtlpfvpFAN-LMqSPIGLSMLGWLSLCVAILVIAFA 261
gi 503546814 215 iwegllttvngpvFASIPI------IGWAKTL------------------IMApFI-AAVSSPLPLLLELIAVMVAIVAL 269
gi 504587062 226 -whgmfawlaspwFDFFPL------VGWSRAI------------------ILY-PS-HENLWLVGGFSFVYVLTFFMILQ 278
gi 501537898 215 vwegllttlngplLGSIPI------IGWAKTL------------------IMA-PF-MSRISP-PLFSVLLASTLAVVAL 267
gi 524719186 202 lhqlwtqlftsklLYAVPL------FGWLKLM------------------LEG-YV-QANMSMMLSGAFLIIIACFIMYR 255
gi 489111222 202 ledgflkfavsreFYYVPF------FGWGKLV------------------LSA-FL-GKEYMGMIIGLALLLLANAVFVI 255
gi 495474583 216 -wmgmfswisspwFDFFPI------VGWSRGI------------------MTY-VG-HQNIILSLGFLCLYGLAYFSVVK 268
gi 769120680 202 ltgsgtlflntelFYWVPL------FGWIKMI------------------LVS-YI-ASSWGLMLLGIGLLLISCMAAYL 255
gi 524159985 205 yhtlfmdfvqsnlFYVVPI------FGWMKLA------------------LIA-YV-EHNYLLVTLGYLLLCGAVILVYV 258
gi 489869982 201 vmaslmafvthdsFFWIPL------FGWAKLG------------------LVG-FV-SHNIVQVLLGFGFMLLFHVLAIY 254
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81663229  262 LCYSLNVGFAELAVEGVSRKQVRIQRMR-SGQ-F----G-------RikKKEHRSAWKLFDFPWWGGIGPVAWHQVTFAI 328
gi 503546814 270 SIY-FAVDYYEEAIGVTE----WVKAVS-EGN-M----QavqaaadDg-KTKRKKVRHVDIEWRAKGPWAFVWKQAVANK 337
gi 504587062 279 AVLKHAGYYYEDVLESTKSKEEAKEKVKgKKE-A----S-------Es-AMSLNAKKKLDIPNFGFGAKALYWRNYVHSS 345
gi 501537898 268 SIYYA-VDFYEESVTVAE----WAQAVS-KGD-MsslqS-------Ss-EKPQKKSKEMDLDWNLKGPWAFTWKQAIGNK 332
gi 524719186 256 LMLRYDFDFIEQAMQDAGEFSRMYEEMR-AGK-R----M----------AMSDKKVRNVRMKGFREGAAAIMSKSFLEMR 319
gi 489111222 256 LFLTFPRNIVEQAVRDAEEISNYVRRVK-ANG-G----N-------Il-S-SEGKIKQVRG-EFPEGARAIFYKNILSMK 319
gi 495474583 269 LVIYFSGYYYEDVLEATKSNEEKLEKVR-GKKhA----S-------Es-NFNLNSKKKLDLANFGFGAKAFYWRNYVHSS 335
gi 769120680 256 LLCGYKGDFVERAMQDAQEFTALYKDVR-AGK--------------Rd-GMSDRKIHEVK-ASFRSGAMAIFSKNVLLLR 318
gi 524159985 259 LFIGYRGNFYEQALQDSLDLSKRMKAAK-AGD-Q----E----------ALRNKKVKLGIKGEFRQGAYAVMSKNILLMR 322
gi 489869982 255 VFANTKGDFFEQAMLDAEDFSEFYARAK-AGK-Q---------------EINTDDIKRVS-VKYGTGARAIHNKNVLLLK 316
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81663229  329 RRNGTLL--V-GLWGVAVASGL-GLMifqffrpgsIHANFREYSMPIAmaasSYLGFLL---------TMSQPiglamtp 395
gi 503546814 338 RASKFIIlgWdHVFMLTIGIVL-GIVss-----gnFDNIAGFAIVYAV----MYATMIGvvpv-glqyELRKQ------- 399
gi 504587062 346 RQDFHPFfgLyGLGFAGLGILFaGLSrf------dWFAHQVIYFYLLI----LIFIYWIagmgrnnvgDLKKP------- 408
gi 501537898 333 RSQKFIIlgWdQLLLLILGAIV-GYFse------gFSSITVFALIYVV----MYAMLVQvlpv-gvqyELHKQ------- 393
gi 524719186 320 KGNSFISt--qDIILLAIYFAV-SFFl-----------DMGLWFFVYM----MMFWLFSsiqaaefmrELDYY------- 374
gi 489111222 320 KTGSFLRk-Q-DFFVIVVYFLI-SYF---------MIAERRFYMFSYM----MILWLFNllndteflgDLKNY------- 376
gi 495474583 336 RQDFHPIfgIySMIMAGIGIVF-SILsh-----fdWFSHIVFYVYMMI----LFVFYFLagigrasvgDLKKP------- 398
gi 769120680 319 KSNDYIRw-T-DVMTIGIYLVI-TLI-----------MDMGFGFFMYM----MMFWLFTivqnsdfmkDMNNY------- 373
gi 524159985 323 KTNSFisv--sdLISIGIYIAV-TIA-----------VDVGFGMFIYM----MVIWIFSslqnsdlskELKNY------- 377
gi 489869982 317 KQRRMisi--kdVLIYIIYLIM-GYFm--------KMPIQGYIMF-------VIIALFNqanvdtltdDLKQY------- 371
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81663229  396 ksltWFRMLPCRPIAIVVGMLAGHVVVLVSIRIAFAVIAAFLTTRGLAEGFGIFVAGVSLDIaygsainLVTAATVLRAM 475
gi 503546814 400 ----YIYMFPGKPVYKILAVNMLSSIKAVLRSSALILPIWILAKLNINQALSIWLFLISIDI-------MTLFSAVAGHM 468
gi 504587062 409 ----YFILIPASWGAKFWNLIRLDLMQTLIFSAILIVPTVLIAKLSLLLIPAFIFAMLMFFL-------SGFAMTTVTNV 477
gi 501537898 394 ----YIYLLPGRPWQKISAVNALLSLRAGMRAMALVLPIWILSGLTFSEALAVFLFIMSADV-------LVLFGMSVVNV 462
gi 524719186 375 ----HIYLIPERPGKKLFYLLAPYLLKYVVLVAFPLAIAAIITHATLLEFIQYYCMLAGYAC-------LFITASVLATR 443
gi 489111222 377 ----QIYLIPENPLKKLIYVVLPAYFKISILIGTAILIAGIFNRMPVLTTLQYFFMLLGYAM-------IFISGTVWAAK 445
gi 495474583 399 ----YFILVPATWGAKFFNIIKLDLVQILTFSAIMIIPSVFIAGLNWALIPLFLLGMFGFYL-------TGFAINVIPQV 467
gi 769120680 374 ----QIYLIPDHPLKKLLCVLLPTFLKMLLPMSAAILVAALLYQTDIASVLQYFIMLLGYAT-------LFLSASVLSVR 442
gi 524159985 378 ----QIYLIPDKPFSKLIAVIIPTFIKIFVVAAVSFIAMGLYYHQSLMMIIVYLLNVIGYTS-------IFISGSVLSVR 446
gi 489869982 372 ----HLYLIPDSPLRKLFNTIKLPFLKSLGIALFFTLVSIGMAGANLREALVALVFVSSYVA-------LINVSSILTIR 440
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81663229  476 PTGTpDVLQGGRTMLY-MF-VLMLALLPsliaaAIVGGVVAVATD----KDWL------Li----ALAA-------AAGS 532
gi 503546814 469 ILPSyDAKNVLYVYMR-MG-VQALSMLPa----ILLAVIIGIAMH----SMVA------A-----FYAF-------AVGA 520
gi 504587062 478 GFEE-GWDRKLIKPVM-TIgVLLFGFLPa----VGSGLFVYIISK----QFAY------G-----MIGI-------CVGM 529
gi 501537898 463 IFPTfDSGNVLTVYLR-FA-VFALSMAPa----ILIALLIGIPTE----SFLW------G-----YFGF-------AVGA 514
gi 524719186 444 LLKS-RKNAFMENMLR-ML-MLVAAAIPs----I---VIIFVLFS----SGLA------N-----TTMMnymsvltLVVN 498
gi 489111222 446 VMKT-KASVALENLLR-ML-IILLAAIPa----TGAGFLAWFLLKdlyvFQAV------V-----TVVT-------IVMN 500
gi 495474583 468 ALEE-SWDRFLIKPLLiGG-IFIFGIIPs----GVAALIVFILTK----QFVF------G-----LLTL-------VLGI 519
gi 769120680 443 ILKS-RNNAIMENMLR-ML-IMVAAAAPg----I--GLTIFFLSR----GEFTlellqqL-----TMIS-------LAMN 497
gi 524159985 447 LLKS-RTSPMMENFMR-MI-VMLIGAIP------SAVITTAILLN----SGTT------VammaaSYVA-------LFVN 500
gi 489869982 441 IMKS-RQNQIVDMLLR-MI----LCVLPivfvfATAGLLSVDIEA----NALA------L-----GITV-------SVIA 492
                        650
                 ....*....|....*.
gi 81663229  533 LLCQPVIWWITSVFFR 548
gi 503546814 521 LVALTLLLYISEKLFA 536
gi 504587062 530 LLVTGVMLHVAMDLIS 545
gi 501537898 515 VLTVFLQLLITDKIFW 530
gi 524719186 499 VVLSIVILYGCKNMLN 514
gi 489111222 501 FLVSAIILIACQGMMN 516
gi 495474583 520 GFVTAILMHVTLDVIK 535
gi 769120680 498 FVISVIIVLVCAPMMN 513
gi 524159985 501 FAISFLILYGCRNMMN 516
gi 489869982 493 YAIAGAGFVWAAPMLK 508
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