Conserved Protein Domain Family
TadF

?
pfam16964: TadF 
Putative tight adherence pilin protein F
TadF is a family of proteins from the tad locus that is part of the type IV bacterial secretory system.
Statistics
?
PSSM-Id: 319036
View PSSM: pfam16964
Aligned: 11 rows
Threshold Bit Score: 201.432
Threshold Setting Gi: 765050141
Created: 31-Jul-2016
Updated: 4-Aug-2016
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75354520    9 KQRGIFSIEFAIVGICFSLLLAFSGDVIIKLSIKGKLDRLSYSLVNVLK----ERTQLYGMD---------YQLTSE--- 72
gi 75353021    6 KQRGNFTVEFAMVGLGLSLIFIFSADVIIKLSIKGKLDRLSYSLVNVLK----ERTQLYDED---------YLITNS--- 69
gi 81399201    4 KQRGVFAIEMAFVLFFLCALLTFTGDIAYQLLNRVNLDRTSYSLVNILK----ERTRFFSTQnadgsrtvrYAVTQK--- 76
gi 81386739   24 QQRGSVTIEFVFMLILLILILAFMTDLAMLRSTTGRLDNISYSLANILR----ERTQLYDGK---------ENLATEnvn 90
gi 81636960   15 NKKGAVTIEFLFMSMFLIVLFAFLFDLVMLRSTLGKLDNASYTLVSILR----ERTQLYDRV---------AQINID--- 78
gi 293326347   4 YQQGISVITLPVIVLVMAALVLFVFSVNHALLTKAKLDRLSYSLVTVVSveplKQPWVTDKQ----------AITQK--- 70
gi 765050141   9 DKRGSITVELCLVTLFFVLLFFILSTTAQYINTKGRFDSIAYSLSSVLR----ERTVLYAGQ---------PLLTEA--- 72
gi 500174001  10 NNQGSVTVEFIFIFFLFSVLLIFLVDVAILQSTTGKLQRTSYSLLNVVK----ERNISDGGK---------EEVTEA--- 73
gi 549797671   7 KQKGNFSVEFAIVGAFVSLLLVFSADVILKISAKGKLDRLSYSLVNVLK----ERTQLYGNN---------YKITRS--- 70
gi 497533955  19 KQQGVFSIEFAMVAVFFSLLIAFSGDVIIKLSLKGKLDRLSYSLVNVLK----ERTQLYDTD---------YQLTTK--- 82
gi 499247629  10 NNQGAVLIEFVFIFFMYSVILIFLIDVAILQATVGKLQRTSYSLTNVIK----ERHIERAGD---------EDIKEE--- 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 75354520   73 -EVDSLNKIAKNSLsrtfGNFD-ANkYG--MLVEELSFS------------------EVDVPNPVISEHRGAETCHVNKS 130
gi 75353021   70 -ESSEIFNIAKNSLrrtlGSYE-DErFG--AVIEELTFR------------------DIGAPNTPVTYNYGSFSCPLSKR 127
gi 81399201   77 -DADDMETLAARLL----GRPD-TGtFG--LRVESLRYNg-----------------STEYYDRYIKSMNNTLDCDPDDA 131
gi 81386739   91 rDVNNFKLLAKRMAf--gDKNS-NKeIY--VVLEYLAPQnsv-------------yrIIGDSAK----------CEPYDS 142
gi 81636960   79 -DHKQFEKLAKKLIy--gDQNS-NKrID--VVLEYWAQDgsgr----------ripnIIGD-------------CKPYKK 129
gi 293326347  71 -LADDLLILAKRHLd--gISSDgDSqVG--IELEQLKFLg-------------------EKNSEHWYGFQSGSECQGHTR 126
gi 765050141  73 -QADQLVRVASELFr--dNHMD-FNkPGaaLVLESLYFEddpqspg----tnqtqiqNAQTFVRPLSSAQGTPSCSPAES 144
gi 500174001  74 -DVKKLKQLAVKLM----GETD-DKlID--VTVTYYGSEpikpqdpksssatrpekkLKSST------FSTGNQCKAAYS 139
gi 549797671  71 -EANAIVIIGRNSLsrtmGSFN-ENqFG--ALVEELTFK------------------GIKKPNPLKRYAIGGQVCNVAQP 128
gi 497533955  83 -EVDDIDIIAQHSLlrtfGHFE-REhYG--LLVEELSFK------------------QVGTPNPAISEKRGVVACRIKQT 140
gi 499247629  74 -ELKQITKLAANLM----GEKE-DQ-IA--VTIYKYGFKdinsskpdenknyqprpdITLDTSKEKIYPTNAQNCQSIKI 144
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 75354520  131 i---------GQLKELTVLSVR-----GRTMPLYRVALCYESDNWFGDLVD------KIYTTVMSDS-IVIGR 182
gi 75353021  128 i---------GELDYLSVVTTW-----ERQATLYRVTLCYQTDNMFGSVVG------ESYTDVISSS-VMIGR 179
gi 81399201  132 l---------TSRRSLVPLSAS-----GKAAPLYQVTVCYRIDSWFNRFMGs----nNQQAYLHSSS-AIVGR 185
gi 81386739  143 l---------QGLENLSPRSEin---dTRKIPLYQVTVCVPNYSFFSALVPgv--akNMKETIRSSS-ITVSR 200
gi 81636960  130 l---------SDLSYLSPRSEln---nERKIPLYQITLCVETQGLFETILLdk--seRSTGLIRSSS-MSVSR 187
gi 293326347 127 l---------TGLADLSPKGGVegfnlGKRAELFQVTVCLTDVKSVNGVLGivnfddFTRDYYKSSS-LLIGR 189
gi 765050141 145 lraiverierTEKRSFSVKKKGrg-inHEWIPFYRVTICMPPPDFNLSVFPs-----HFLPEIKSSSpMMLAR 211
gi 500174001 140 ----------TNITDAAPLTENfk-gsNRYAAIYYVTVCRKMTNLFKGLTLak--qdYESDRLRASA-LGVGR 198
gi 549797671 129 l---------SELSHLSVVTSW-----ERQATLYRITLCYETDNWFGSIIG------DSFTTVSSSS-VMLGR 180
gi 497533955 141 i---------DSLESMTVVTNR-----GREMPLYRVTVCYESDNWIGGILG------REFTHVMSDS-VVIGR 192
gi 499247629 145 ----------DDIKKASPLTENlr-gtNRYATLYQVTVCKKMDNLFKGLTLnr--kdYSNNWLRASS-LGVAR 203
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap