Conserved Protein Domain Family
Helo_like_N

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pfam17111: Helo_like_N 
Fungal N-terminal domain of STAND proteins
Helo_like is a family of predicted fungal STAND NTPases. The exact function is not known.
Statistics
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PSSM-Id: 319133
View PSSM: pfam17111
Aligned: 32 rows
Threshold Bit Score: 239.824
Threshold Setting Gi: 1021540535
Created: 29-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74595593    2 AEPISLASGLLALATFAFQSSVSLYDTVKSFHSHPTRVRQLIEELEALSGVLGPLVDrvQ-ATNDTDLSALNLPLLSCGK 80
gi 74595153    2 ADPLSIAASMLAVITAAVESVKSLHSTVKRFKDRDKTLRRLRTELEDLTNILGSLGD--ViNAEMPMLALLQGPVERCNQ 79
gi 380493785   2 ADPLSITASVLAVATAAFVSTKTLIDTVNRFKGRDKTLQRLQDELEDLLKILEMLQGi--sQCELSILALLEGPVRRCSE 79
gi 697073201   2 ADPLSISASILGVVTAAIVTTRSLKETVQRFRDRDRSLRRLVEQLTDLITVLDALQEv-A-HVEASMLTLLEGPVDRCRQ 79
gi 302885314   2 ADPLSISASILAIVTASVVSVKSLKETVERYRGRDETLRRLIGQLEDLVSILDTLEKi--sQVEASMLALLKGPVERCRQ 79
gi 315050956   2 TDPLSITASVLAVTTVAIQSTKSLCDTVKRFRGRDKTLRRLQDELEDLANILNSLSQ--MsDAETPMLALLEGPIDRCSQ 79
gi 242804810   2 ADPLSVAASVLAVVTAAAQSTRSLYDTIRRFQDRSKTLRRLQDELEDLANILSSLAQ--VvTSETTMLELLQRPIDRCSQ 79
gi 238485394   2 ADPLSIAASALAVVTAAIQSTKSLVDTVKRFKDRDKTLRRLQAELEDLTKILDALAH--VtSTEKSMLALLEDPLNRCSQ 79
gi 358375490   2 ADPLSIAASVLAVITAAVQSTKSLQGTVKRFRNRDKTLRRLQNELEDLTNILESLQQ--VtNNERSMLALLQGPIDRCNQ 79
gi 685417925   2 ADPLTISVSVLAIITGAIQSTKSLHATVSRYKARDRTLNRLHDELVDLARVLDSLEQ--AvGSEASIWALLEGPVSQCSK 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74595593   81 ACKLFQKEIMKCAGRssaTRTSFRDWAKLKYmG-DDVDGFRRVLAAYKSTITIALTDANLqkstvtaetlknyeSLIKTA 159
gi 74595153   80 LCREFELAMENFGRK---STTGFRDWAKMEF-MrGDINEFIDNIAGYKSTINVGLGTITIhsskvtervlreynEMVQDT 155
gi 380493785  80 LCLNFDKSMKDFTGKa--TKTGFRDWAKLEFrR-GDINEFIDTVSGYKSTISVGLGAINLnvskasqqileqysEMIEDT 156
gi 697073201  80 LCHEFQDAMEDFKGKs---sMGFRDWTKMEFmK-GDINEFMDTLSGYKSTISVGLGTITLqmskatqdvlerysEMVQDT 155
gi 302885314  80 LCQAFEVVMKDFVGKs---sTGFRDWAKLEFmK-GDINEFMRTLSGYKSTISIGLGTITF--------------EMVQDT 141
gi 315050956  80 VCDDFERSMKVFSGK---SNPGFRDWTKMEF-MrGDINEFIDAITGYKLTISVGLGTVTMhtskvshqvlqefnEVIQDT 155
gi 242804810  80 VCRDFEASMKTFSGK---SKPGFRDWTKMEF-MrGDINDFIDTIAEYKSTISVGLGTINLhtskishqalqeynEMIQDT 155
gi 238485394  80 ICREFERSMKVFSER---SKIGFRDWAKLEF-MrGDINDFIDTIAGYKSTISVGLGTITMqttkvsqhvleeynELVQDT 155
gi 358375490  80 ICSEFEQSIKVFSGK---STTGLLDWAKMEF-MrGDINEFIDTIAGYKSTISVGLGTITIhsskvpqkvleeynEMIQDT 155
gi 685417925  80 TCREFEEVMKKFGGK---SVTGLRDWAKMEF-MrDDINGFIETLATYKATITVGLGLISMlysklnhkvleqfdEAIKDA 155
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 74595593  160 KEDLEDHLAAIDEKLefmlrkAVTGsDEDSLELQrIKEERLSAEKCLQICD 210
gi 74595153  156 AYDLDMHLQRIDKKLal--ltAQDD-SASDVSVD-LEDEREVTKQCLRICE 202
gi 380493785 157 TYNLNLRLQRIDDKIallpqkTADSsDTSID----LNNERAVTERCLSICE 203
gi 697073201 156 SYDLKIHLQRIDEKMalf-----tseIPGASNID-LKDERAVTAHCIRICE 200
gi 302885314 142 TYNLNVQLQRINEKMerf-----pseEPDTTRLD-LRDESTVIKHCIGICE 186
gi 315050956 156 VYNLKVHLQRIDEKMgq--ftIENT-SASNINID-LKDERAVTKQCLRICE 202
gi 242804810 156 VYNLELRLRRIDEKMaq--fpLNDC-DASSTSID-LKDERAVTQQCIRVCK 202
gi 238485394 156 VYNLEVYLRRIDEKLar--ipFDTTdNTPGTNLD-LKDEREVTKQCLRICQ 203
gi 358375490 156 AYNLELHLRRIDEKLaq--ltTEEI-NASDISLN-LEDERDVTKQCLRVCE 202
gi 685417925 156 VDNLEMRLQRIDERLar--idPDET-SDVETSIM-LHDERERTRQCLRVCE 202
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