3M6U


Conserved Protein Domain Family
RsmF_methylt_CI

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pfam17126: RsmF_methylt_CI 
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RsmF rRNA methyltransferase first C-terminal domain
This is the first of two distinct C-terminal domains of the 16S rRNA methyltransferase RsmF. It is necessary for stabilizing the catalytic core, pfam01189.
Statistics
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PSSM-Id: 319145
View PSSM: pfam17126
Aligned: 122 rows
Threshold Bit Score: 58.2108
Threshold Setting Gi: 524771373
Created: 31-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
3M6U_B         325 GFLEE-AGL--TLE-GP-VLDRAGHLYLLPEGLPTLLGLKAPAPGLYLGKVQKGRFLPARALALAF 385
86_pfamImport    1 EFVKNsLNC--PPK-DN-LIIHGSSLLSVPY-CVDLRGLRVMRSGLYIGELKKNRFEPSQAFAMTL 61
74_pfamImport    1 EFMRE-IPEweQWK-NR-IIFIKERAFLLPENCPDFKGLRVVRSGLYLGDCLKKRFEPSQALAMAL 63
70_pfamImport    1 VFMQQ-ITK--PLS-GK-TEVQKERIYLLPEGTKIERGIRYLRTGLYLGDQKKKRFEPSQVLAMCL 61
73_pfamImport    1 DFFAH-VNI--AYDvGR-IDVRGDNLYYLPEPQYDGRGLHFLRNGLFMGEFKKKRFEPSQPFALAL 62
101_pfamImport   1 AFYQEnLNK--KVP-SY-IIENNGHLYAVKKNFPELKGIRVLRNGLYLGEVRKNRFIPSYSLALTL 62
61_pfamImport    1 KFYHNnLNL--PVP-QY-LYNSNNHIYAILPQFPDLKGTKVLRNGLYLGECKKGRFEPSHSLALSL 62
57_pfamImport    1 KFYQEnLNI--PVP-PY-LYQSNNHVYAILNHFPEL-PIKVLRNGLYLGECKKGRFEPSLSLALTL 61
gi 81848014    329 QFADKyLDL--DLE-ILnLQVDNNFVYHVPLDLPELKGIRIYRHGWLMGELKKNRFEPSHWLAMGL 391
gi 503126745   327 nFEKEnLNI--KLD-GS-FIISDNKLYKEVYTQKLIKGFKVIRNGLFVGEIKKEQFIPSQAFIMTL 388
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