Conserved Protein Domain Family
SdrD_B

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pfam17210: SdrD_B 
SdrD B-like domain
This family corresponds to the B-like domain from the SdrD protein. This domain has three calcium binding sites within a greek key beta sandwich fold.
Statistics
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PSSM-Id: 319228
View PSSM: pfam17210
Aligned: 49 rows
Threshold Bit Score: 99.9858
Threshold Setting Gi: 0
Created: 1-Aug-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81772142    779 ASLGDFVFNDVNNNGIQ-DAGE-IGVGGVTVELi-NPANGDVIa--TTTTDANGGYGFSGLTPGEYQVKFTA-PAGY-NF 851
14_pfamImport    1 GSLGDYVFADANKNGAQ-DTGE-TGINGVKVYL--YDQLGTTKl-dSTVTAGGGKYLFDSLTDGSYVVRFIA-PTGYeST 74
27_pfamImport    1 GSIGNYVWFDYNNDGTQgDPAVePGVSGATVQL--YAANNLTTpiaTTTTSSTGAYLFSNLPSGQYVVKFTA-PNGTvFA 77
36_pfamImport    1 DEIGEFVWDDVDRNGLQ-DAGE-PGVQGVKVTL--KDASGKALg--TITTDAGGKYRFTKLKDGIYQVCFDIaGLPF-TY 73
22_pfamImport    1 AKIGDFVWADRNRDGLQ-DPDE-PGVAGVKVTL--KDGAGGTIg--TATTDDKGKYGFEKLKDGTYQVCFAV-PADF-TV 72
11_pfamImport    1 GAIGDFVWDDLNRNGLQ-DAGE-PGIAGVKVNL--LDEQGEVKs--STTTNASGKYMFGDLDEGTYRVQFTV-PTGR-TF 72
gi 122540119   682 YNLGDYVWEDTNKNGIQ-DQDE-KGISGVTVTL--KDENGNVLk--TVTTDADGKYKFTDLDNGNYKVEFTT-PEGY-TP 753
gi 122540120   497 YNLGDYVWEDTNKDGKQ-DANE-KGIKGVYVIL--KDSNGKELd--RTTTDENGKYQFTGLSNGTYSVEFST-PAGY-TP 568
gi 122540119   793 YNLGNYVWEDTNKDGKQ-DSTE-KGISGVTVTL--KNENGEVLq--TTKTDKDGKYQFTGLENGTYKVEFET-PSGY-TP 864
30_pfamImport    1 CHIGDLVWDDLNGNGIQ-DSGE-PGIKGVKVELysKNANGNFVkirETTTNSNGIYKFAVNNNKNYKVKFIL-PSGY-VF 76
                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*..
gi 81772142    852 SLANQGNNDAlDSDA--NVsTG-ITQTLTLASG-E---FNGTLDAGL 891
14_pfamImport   75 TANAVGVSDAlDSDAgaNGfTGvYTIDTSQPTS-StarNNPTVDAGY 120
27_pfamImport   78 TPKKPGVGDElDSDAneDGlTDvITIDVTQPIS-StarNNPNVDAGI 123
36_pfamImport   74 TAKDAGDDTK-DSDA--DPaTG-CTATTTVGPRkR---VDLTLAAGL 113
22_pfamImport   73 TRRDAGSDDR-DSDA--DPgG--CTAPRTVGAPsH---EDFAVDLGL 111
11_pfamImport   73 TAQNAGAPEK-SSAV--DRsNG-LSGPIVFKVAdSkvmQNMNVDAGV 115
gi 122540119   754 TTVTSGSDIEkDSNG--LTtTG-VING-------A---DNMTLDSGF 787
gi 122540120   569 TTANVGTDDAvDSDG--LTtTG-VIKD-------A---DNMTLDSGF 602
gi 122540119   865 TQVGSGTDEGiDSNG--TStTG-VIKD-------K---DNDTIDSGF 898
30_pfamImport   77 SPMDQGTNDNkDSDA--NTaTG-MTSVIKIRNY-N---DNCTIDAGM 116
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