2VNU


Conserved Protein Domain Family
Rrp44_S1

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pfam17215: Rrp44_S1 
S1 domain
This domain corresponds to the S1 domain found at the C-terminus of ribonucleases such as yeast Rrp44.
Statistics
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PSSM-Id: 319233
View PSSM: pfam17215
Aligned: 62 rows
Threshold Bit Score: 107.99
Threshold Setting Gi: 599388833
Created: 31-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2VNU_D        671 STETGYVIKVFNNGIVVLVPKFGVEGLIRLDNLTEDPNSAAFDEVEYKLTFV--PTNSD--KP--RDVYVFDKVEVQVRS 744
gi 527299172  900 TTEEAFVIRTFRNGLAVYVSKLGLEGLVTFKR------ETQFDPDSYTITIQ--SASAE--AN--TTIAVFDKVVVEIEV 967
gi 443918142  249 VVEEAFVIRAFRNGLAVFVSKLGIEGLVTFKN------EQEFDSESYSVTLP--GPSGT--AK----VAVFDRVRVKIRV 314
gi 299747393  912 IVEDAFVIRAFRNGLGVFISALGIEGLVTFKK------DMQFDAENYSVTVQ--PP-GA--SP--VTISVFDKVRVRLQV 978
gi 930411869  724 VREEAFVIRTFRNGLSVFVSKLGLEGLITFQKDTHD-----FDPENYCINVP--KPGGG--TA---TIAVFDRVTVDISI 791
gi 630177548  907 vaEEAYVIRTFRNGVGVFVSKLGIEGLVTLKH-----NLHTFDADNYTITI----------GE--KKIKIFDKVVVKIEV 969
gi 388855912  935 MQASAYVIRVFRNGLAVFVNQFGLEGLITF------NQEVEFDQDNHQINIP--TSVSGlsKD--LELGIFDQCTVQIGL 1004
gi 599388833  909 VVEDAFVIRVFRNGVGVFVSKLGLEGLVTFTR------ETSFDAENYQISVPttATATA--TT--TTVAVFDRVKVQIAV 978
gi 449544190  901 VIEDAFVIRTFRNGLGVFVSKLGIEGLVMFKr------eIQFDADNYTISVP--SASGA--ES--TTIAVFDKVRVQIEV 968
gi 343424768  923 MQASAYVIRVFRNGLAVFVNQFGLEGLITFKe------eVEFDQDNYEVTVP--RRISG--LTtdLRLGIFDQCTVRIGV 992
                          90
                  ....*....|...
2VNU_D        745 VXDPITSKRKAEL 757
gi 527299172  968 EKDKNTQRGRVKM 980
gi 443918142  315 EQDKNTLRGKVKM 327
gi 299747393  979 EKDKNTQRGKVKM 991
gi 930411869  792 EKDQNTQRHKVKM 804
gi 630177548  970 EKDKNTQRGKVKM 982
gi 388855912 1005 SKDHATKRGKVSM 1017
gi 599388833  979 ERDKNTQRGKVKM 991
gi 449544190  969 EKDKNTQRGKVKM 981
gi 343424768  993 AKDANTKRGKVSM 1005
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