1NPO


Conserved Protein Domain Family
NH

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smart00003: NH 
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Neurohypophysial hormones
Vasopressin/oxytocin gene family.
Statistics
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PSSM-Id: 128323
View PSSM: smart00003
Aligned: 12 rows
Threshold Bit Score: 76.6884
Threshold Setting Gi: 82136226
Created: 12-Jul-2011
Updated: 16-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1NPO_A        8 RQCLPCGPGGKGRCFGPSICCGDELG------CFVGTAEALRCQEENYLPSPCQ-SGQKPCGs--GGRCAAAGICCNDES 78
gi 75570333  41 RQCLPCGPGGQGRCFGPRICCGEAMG------CRLGGPDVAICRAERLMPSPCE-SRGEPCGh--GGKCGAPGLCCSSES 111
gi 13626582  39 RKCMSCGPGEQGRCFGPSICCGKDVG------CWMGSPETAHCMEENYLPTPCQ-VGGRPCGs-dTVRCASPGVCCDSEG 110
gi 82136226  41 RSCAACGLG--GQCVGPSICCGGLLGgghggsCIVGGPLSAPCKRENLHPEPCRpGGGSSCGl--EGICAAPGICCTDVT 116
gi 45383980  39 RQCLPCGPGNRGRCFGPGICCGAELG------CYLGTAETRRCAEEDYMPSPCQ-AGGQPCGs--dGRCAANGVCCSADT 109
gi 128090    40 RQCLACGPGDKGRCLGPSICCGEEIG------CLVGSPWMARCQEEEYLPSPCQ-TAGKLCGs-dAGPCAAPGVCCGTEG 111
gi 225176     8 RQCLPCGPGGQGRCFGPSICCADALG------CFVGTAEALRCQEENYLPSPCQ-SGQKPCGs--GGRCAANGVCCNDES 78
gi 222919    39 RQCMSCGPGDRGRCFGPNICCGEGMG------CYMGSPEAAGCVEENYLPSPCE-AGGRVCGs--EGSCAASGVCCDSES 109
gi 128077     8 RQCLPCGPGNRGRCFGPGICCGVELGg-----CYVGTAETRRCAEEDYLPSPCQ-PGGQPCGs--GGRCAADGVCCSADT 79
gi 231838    48 RECMKCGPGGTGQCVGPSICCGQDFG------CHVGTAEAAVCQQENDSSTPCL-VKGEACGsrdAGNCVADGICCDSES 120
gi 548344     8 RKCLPCGPRNRGRCFGPRICCGEELG------CYLGTPETLRCQEESFLPTPCE-SGRKPCGg-dGASCAAPGICCSSEG 79
gi 75570404  39 RQCLPCGPRNRGQCFGTSICCGEEIG------CYFGTSETLRCQKEVYLPSPCE-PTGRLCGr-nGGKCATSGTCCTAES 110

                ....*..
1NPO_A       79 CVTEPEC 85
gi 75570333 112 CAEDASC 118
gi 13626582 111 CSADQSC 117
gi 82136226 117 CSIDSTC 123
gi 45383980 110 CAMDAVC 116
gi 128090   112 CKLDPNC 118
gi 225176    79 CVIEPEC 85
gi 222919   110 CVLDPDC 116
gi 128077    80 CAADASC 86
gi 231838   121 CAVNDRC 127
gi 548344    80 CVADPAC 86
gi 75570404 111 CTVDPTC 117
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