3K5K,1MVH


Conserved Protein Domain Family
PreSET

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smart00468: PreSET 
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N-terminal to some SET domains
A Cys-rich putative Zn2+-binding domain that occurs N-terminal to some SET domains. Function is unknown. Unpublished.
Statistics
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PSSM-Id: 128744
View PSSM: smart00468
Aligned: 18 rows
Threshold Bit Score: 83.6197
Threshold Setting Gi: 297285363
Created: 13-Jul-2011
Updated: 16-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
3K5K_A         13 CRDVARGYENVPIPCV-NGVDGEPCp--------EDYKYISENCETSTMN--IDRNITHLQHCTCVD-DCSSSN---CLC 77
gi 630594     911 VADFSLGTEGIPIPLV-NSVDNDEP---------PSLEYSKRRFQYNDQVdiSSVSRDFCSGCSCDG-DCSDASk--CEC 977
gi 4678372    384 NFDISNGKENVPVYLF-NDIDSDQEp--------LYYEYLAQTSFPPGL---FVQQSGNASGCDCVN-GCGSG----CLC 446
gi 2459412    386 SFDLSNKKENVPVFLY-NDVDGDQEp--------RHYEYIAKAVFPPGI---FGQGGISRTGCECKL-SCTDD----CLC 448
gi 3668088    541 NVDITEGKETLPICAV-NNLDDEKp---------PPFIYTAKMIYPD------WCRPIPPKSCGCTN-GCSKSKn--CAC 601
gi 3986768    713 CRDVARGYENVPIPCV-NGVDGEPCp--------EDYKYISENCETSTMN--IDRNITHLQHCTCVD-DCSSSN---CLC 777
gi 4884053    753 CADASNGREARPIQVVrNELAMSENedeadslmwPDFRYVTQCIIQQNSVq-IDRRVSQMRICSCLD-SCSSDR---CQC 827
gi 17529178   507 kLDISEGKEQSPISAV-NEIDDEKPp--------L-FTYTVKLIYPD------WCRPVPPKSCCCTT-RCTEAEarvCAC 569
gi 505110     679 ILDITYGKEDVPLSCV-NEIDTTPP---------PQVAYSKERIPGKGVF--INTGPEFLVGCDCKD-GCRDKSk--CAC 743
gi 297285363   27 QLDVACGQENLPVGA----WPPGAAp--------APFQYTPDHVVGPGAD--IDPTQITFPGCICVKtPCLPGT---CSC 89
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
3K5K_A         78 GQLS--IRCWYD---------------KDGRllqeFNKIEPPLIFECNQACS 112
gi 630594     978 QQLSieAMKRLPhnlqfdghdelvphyQNRL----LSSKVISGLYECNDQCS 1025
gi 4678372    447 EAKN--SGEIAY---------------DYNG----TLIRQKPLIHECGSACQ 477
gi 2459412    449 ARKN--GGEFAY---------------DDNG----HLLKGKHVVFECGEFCT 479
gi 3668088    602 IVKN--GGKIPY----------------YDG----AIVEIKPLVYECGPHCK 631
gi 3986768    778 GQLS--IRCWYDkd-----------grLLQE----FNKIEPPLIFECNQACS 812
gi 4884053    828 NGAS--SQNWYTae-----------srLNAD----FNYEDPAVIFECNDVCG 862
gi 17529178   570 VEKN--GGEIPY---------------NFDG----AIVGAKPTIYECGPLCK 600
gi 505110     744 HQLTiqATACTPggqin-----pnsgyQYKR----LEECLPTGVYECNKRCK 786
gi 297285363   90 LRHG--ENYDDNsc------------lRDIG----SGGKYAEPVFECNVLCR 123
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