1JBI


Conserved Protein Domain Family
LCCL

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smart00603: LCCL 
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LCCL domain
Statistics
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PSSM-Id: 128866
View PSSM: smart00603
Aligned: 11 rows
Threshold Bit Score: 108.633
Threshold Setting Gi: 74722335
Created: 12-Jul-2011
Updated: 16-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1JBI_A          4 IAITCFTRGLDIR---KEKAD---VLCPGGCPLEE---FSVYGNI--VYASVSSICGAAVHRGVISN-SGGPVRVYSLPG 71
gi 74734980    42 PQINCDVKAGKII---DPEFI---VKCPAGCQDPK---YHVYGTD--VYASYSSVCGAAVHSGVLDN-SGGKILVRKVAG 109
gi 74722335   126 LFGHCIQFFWNLS----SVST-----APAGCLLPF---AEISGTIphGYRDSSPLCMAGVHAGVVSNtLGGQISVVISKG 193
gi 296214738   30 IAITCFTRGLDIR---KEKAD---VLCPGGCPLEE---FSVYGNI--VYASVSSICGAAVHRGVISN-SGGPVRVYSLPG 97
gi 194036612  291 QIVSCEVRLRDQC---KGTTcn-rYECPAGCLDSK---AKVIGSV--HYEMQSSICRAAIHYGIIDN-DGGWVDITRQGR 360
gi 297699365  374 QVVRCDTKMKDRC---KGSTcn-rYQCPAGCLNHK---AKIFGTL--FYESSSSICRAAIHYGILDD-KGGLVDITRNGK 443
gi 332826976  392 QAVTCETTVEQLCpfhKPASHcprVYCPRNCMQANphyARVIGTR--VYSDLSSICRAAVHAGVVRN-HGGYVDVMPVDK 468
gi 332846503  387 QDLDCYTTVAQLCpfeKPATHcprIHCPAHCKDEPsywAPVFGTN--IYADTSSICKTAVHAGVISNeSGGDVDVMPVDK 464
gi 45384390    26 NAITCFTRGLDLR---KETED---VLCPANCPLWQ---FYVFGDG--IYASLSSVCGAAIHRGVITN-AGGAVRVQTLPG 93
gi 148704834   54 IPVTCFTRGLDIR---KEKAD---VLCPGGCSLEE---FSVFGNI--VYASVSSICGAAVHRGVIGT-SGGPVRVYSLPG 121
gi 74766616   391 REVDCDSKAVDFL---DDVGEpvrIHCPAGCSLTA---GTVWGTA--IYHELSSVCRAAIHAGKLPN-SGGAVHVVNNGP 461
                          90
                  ....*....|....*
1JBI_A         72 RENYSSVDANGIQSQ 86
gi 74734980   110 QSGYKGSYSNGVQSL 124
gi 74722335   194 IPYYESSLANNVTSV 208
gi 296214738   98 RENYSSVDANGIQSQ 112
gi 194036612  361 KHYFIKSNRNGIQTI 375
gi 297699365  444 VPFFVKSERHGVQSL 458
gi 332826976  469 RKTYIASFQNGIFSE 483
gi 332846503  465 KKTYVGSLRNGVQSE 479
gi 45384390    94 QENYPAVHANGIQSQ 108
gi 148704834  122 RENYSSVDANGIQSQ 136
gi 74766616   462 YSDFLGSDLNGIKSE 476
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