3H0G,1I3Q,2PMZ


Conserved Protein Domain Family
RPOLCX

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smart00659: RPOLCX 
Click on image for an interactive view with Cn3D
RNA polymerase subunit CX
present in RNA polymerase I, II and III
Statistics
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PSSM-Id: 128906
View PSSM: smart00659
Aligned: 17 rows
Threshold Bit Score: 48.1196
Threshold Setting Gi: 11497676
Created: 12-Jul-2011
Updated: 16-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*..
3H0G_L       20 MIYLCADCGARNTIQ---AKEVIRCRECGHRVMYKMRTKRMVQFEAR 63
gi 296201207 15 MIYICGECHTENEIK---SRDPIRCRECGYRIMYKKRTKRLVVFDAR 58
gi 1050852   20 MIYLCADCGRRNTIQ---AKEVIRCRECGHRVMYKMRTKRMVQFEAR 63
gi 15237533   8 VTYVCGDCGQENTLK---SGDVIQCRECGYRILYKKRTRRVVQYEAR 51
1I3Q_L       27 LKYICAECSSKLSLS---RTDAVRCKDCGHRILLKARTKRLVQFEAR 70
gi 15220906  17 VIYVCGDCGQENILK---RGDVFQCRDCGFRILYKKRILDKKETRIG 60
gi 162606330 27 MEYICSECGMLINIS---DLTSLTCKSCGCRILYKKRSDEVVEYIAR 70
gi 3258341   32 AVYRCAKCGREVKLDl-sTTRDLRCPYCGSKILYKPRPKIPRRVKAI 77
2PMZ_P        2 AVYRCGKCWKTFTDEqlkVLPGVRCPYCGYKIIFMVRKPTIKIVKAI 48
gi 14520491   4 AIYRCAKCGREVKIDl-sVTRDLRCPYCGSKILYKPRPKVPRRVKAI 49
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