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Conserved domains on  [gi|1835845340|pdb|6UPI|A]
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Chain A, Mycocyclosin synthase

Protein Classification

cytochrome P450 family protein( domain architecture ID 1750044)

cytochrome P450 family protein may catalyze the oxidation of organic species by molecular oxygen, by the oxidative addition of atomic oxygen into an unactivated C-H or C-C bond

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
cytochrome_P450 super family cl41757
cytochrome P450 (CYP) superfamily; Cytochrome P450 (P450, CYP) is a large superfamily of ...
17-395 8.56e-131

cytochrome P450 (CYP) superfamily; Cytochrome P450 (P450, CYP) is a large superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs with > 40% sequence identity are members of the same family. There are approximately 2250 CYP families: mammals, insects, plants, fungi, bacteria, and archaea have around 18, 208, 277, 805, 591, and 14 families, respectively. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop. Their monooxygenase activity relies on the reductive scission of molecular oxygen bound to the P450 heme iron, and the delivery of two electrons to the heme iron during the catalytic cycle. CYPs use a variety of redox partners, such as the eukaryotic diflavin enzyme NADPH-cytochrome P450 oxidoreductase and the bacterial/mitochondrial NAD(P)H-ferredoxin reductase and ferredoxin partners. Some CYPs are naturally linked to their redox partners and others have evolved to bypass requirements for redox partners, and instead react directly with hydrogen peroxide or NAD(P)H to facilitate oxidative or reductive catalysis.


The actual alignment was detected with superfamily member cd11031:

Pssm-ID: 477761 [Multi-domain]  Cd Length: 380  Bit Score: 380.37  E-value: 8.56e-131
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       17 IPDAVAELRTREPIRKVRTITGAEAWLVSSYALCTQVLEDRRFSMKETAAAGAPRLNALTVPPEVVNNMGNIADAGLRKA 96
Cdd:cd11031   1 PPPEYAELRREGPVARVRLPYGDEAWLVTRYADVRQVLADPRFSRAAAAPPDAPRLTPEPLLPGSLMSMDPPEHTRLRRL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       97 VMKAITPK-APGLEQFLRDTANSLLDNLITEGAPADLRNDFADPLATALHCKVLGIPQEDGPKlFRSLSIAFMSSADPIP 175
Cdd:cd11031  81 VAKAFTARrVERLRPRIEEIADELLDAMEAQGPPADLVEALALPLPVAVICELLGVPYEDRER-FRAWSDALLSTSALTP 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      176 -AAKINWDRDIEYMAGILENPNI--TTGLMGELSRLRKDpaYSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRP 252
Cdd:cd11031 160 eEAEAARQELRGYMAELVAARRAepGDDLLSALVAARDD--DDRLSEEELVTLAVGLLVAGHETTASQIGNGVLLLLRHP 237
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      253 QLRNLLHEKPELIPAGVEELLRIN-LSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPnP 331
Cdd:cd11031 238 EQLARLRADPELVPAAVEELLRYIpLGAGGGFPRYATEDVELGGVTIRAGEAVLVSLNAANRDPEVFPDPDRLDLDRE-P 316
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....
6UPI_A      332 TSHLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLAVPIDQLVWRTRFQRRIPERLPVLW 395
Cdd:cd11031 317 NPHLAFGHGPHHCLGAPLARLELQVALGALLRRLPGLRLAVPEEELRWREGLLTRGPEELPVTW 380
 
Name Accession Description Interval E-value
Cyp158A-like cd11031
cytochrome P450 family 158, subfamily A and similar cytochrome P450s; This family is composed ...
17-395 8.56e-131

cytochrome P450 family 158, subfamily A and similar cytochrome P450s; This family is composed of cytochrome P450s (CYPs) with similarity to Streptomyces coelicolor CYP158A1 and CYP158A2, Streptomyces natalensis PimD (also known as CYP107E), Mycobacterium tuberculosis CYP121, and Micromonospora griseorubida MycG (also known as CYP107B). CYP158A1 and CYP158A2 catalyze an unusual oxidative C-C coupling reaction to polymerize flaviolin and form highly conjugated pigments; CYP158A2 produces three isomers of biflaviolin and one triflaviolin while CYP158A1 produces only two isomers of biflaviolin. PimD is a cytochrome P450 monooxygenase with native epoxidase activity that is critical in the biosynthesis of the polyene macrolide antibiotic pimaricin. CYP121 is essential for the viability of M. tuberculosis and is a novel drug target for the inhibition of mycobacterial growth. MycG catalyzes both hydroxylation and epoxidation reactions in the biosynthesis of the 16-membered ring macrolide antibiotic mycinamicin II. This family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410657 [Multi-domain]  Cd Length: 380  Bit Score: 380.37  E-value: 8.56e-131
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       17 IPDAVAELRTREPIRKVRTITGAEAWLVSSYALCTQVLEDRRFSMKETAAAGAPRLNALTVPPEVVNNMGNIADAGLRKA 96
Cdd:cd11031   1 PPPEYAELRREGPVARVRLPYGDEAWLVTRYADVRQVLADPRFSRAAAAPPDAPRLTPEPLLPGSLMSMDPPEHTRLRRL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       97 VMKAITPK-APGLEQFLRDTANSLLDNLITEGAPADLRNDFADPLATALHCKVLGIPQEDGPKlFRSLSIAFMSSADPIP 175
Cdd:cd11031  81 VAKAFTARrVERLRPRIEEIADELLDAMEAQGPPADLVEALALPLPVAVICELLGVPYEDRER-FRAWSDALLSTSALTP 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      176 -AAKINWDRDIEYMAGILENPNI--TTGLMGELSRLRKDpaYSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRP 252
Cdd:cd11031 160 eEAEAARQELRGYMAELVAARRAepGDDLLSALVAARDD--DDRLSEEELVTLAVGLLVAGHETTASQIGNGVLLLLRHP 237
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      253 QLRNLLHEKPELIPAGVEELLRIN-LSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPnP 331
Cdd:cd11031 238 EQLARLRADPELVPAAVEELLRYIpLGAGGGFPRYATEDVELGGVTIRAGEAVLVSLNAANRDPEVFPDPDRLDLDRE-P 316
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....
6UPI_A      332 TSHLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLAVPIDQLVWRTRFQRRIPERLPVLW 395
Cdd:cd11031 317 NPHLAFGHGPHHCLGAPLARLELQVALGALLRRLPGLRLAVPEEELRWREGLLTRGPEELPVTW 380
CypX COG2124
Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism, Defense ...
1-395 2.12e-73

Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism, Defense mechanisms]; Cytochrome P450 is part of the Pathway/BioSystem: Biotin biosynthesis


Pssm-ID: 441727 [Multi-domain]  Cd Length: 400  Bit Score: 234.40  E-value: 2.12e-73
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A        1 TATVLLEVPFSARGDRIPDAV-AELRTREPIRKVRtITGAEAWLVSSYALCTQVLED-RRFSMketaaagAPRLNALTVP 78
Cdd:COG2124   4 TATPAADLPLDPAFLRDPYPFyARLREYGPVFRVR-LPGGGAWLVTRYEDVREVLRDpRTFSS-------DGGLPEVLRP 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       79 PEVVNNMGNIAD----AGLRKAVMKAITPKA-PGLEQFLRDTANSLLDNLITEGaPADLRNDFADPLATALHCKVLGIPQ 153
Cdd:COG2124  76 LPLLGDSLLTLDgpehTRLRRLVQPAFTPRRvAALRPRIREIADELLDRLAARG-PVDLVEEFARPLPVIVICELLGVPE 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      154 EDGPKLFRsLSIAFMSSADPIP-----AAKINWDRDIEYMAGILE----NPniTTGLMGELSRLRKDPaySHVSDELFAT 224
Cdd:COG2124 155 EDRDRLRR-WSDALLDALGPLPperrrRARRARAELDAYLRELIAerraEP--GDDLLSALLAARDDG--ERLSDEELRD 229
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      225 IGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPELIPAGVEELLRInLSFADGLPRLATADIQVGDVLVRKGELV 304
Cdd:COG2124 230 ELLLLLLAGHETTANALAWALYALLRHPEQLARLRAEPELLPAAVEETLRL-YPPVPLLPRTATEDVELGGVTIPAGDRV 308
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      305 LVLLEGANFDPEHFPNPGSIELDRPnPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLAVPiDQLVWRTRFQ 384
Cdd:COG2124 309 LLSLAAANRDPRVFPDPDRFDPDRP-PNAHLPFGGGPHRCLGAALARLEARIALATLLRRFPDLRLAPP-EELRWRPSLT 386
                       410
                ....*....|.
6UPI_A      385 RRIPERLPVLW 395
Cdd:COG2124 387 LRGPKSLPVRL 397
p450 pfam00067
Cytochrome P450; Cytochrome P450s are haem-thiolate proteins involved in the oxidative ...
93-369 2.65e-14

Cytochrome P450; Cytochrome P450s are haem-thiolate proteins involved in the oxidative degradation of various compounds. They are particularly well known for their role in the degradation of environmental toxins and mutagens. They can be divided into 4 classes, according to the method by which electrons from NAD(P)H are delivered to the catalytic site. Sequence conservation is relatively low within the family - there are only 3 absolutely conserved residues - but their general topography and structural fold are highly conserved. The conserved core is composed of a coil termed the 'meander', a four-helix bundle, helices J and K, and two sets of beta-sheets. These constitute the haem-binding loop (with an absolutely conserved cysteine that serves as the 5th ligand for the haem iron), the proton-transfer groove and the absolutely conserved EXXR motif in helix K. While prokaryotic P450s are soluble proteins, most eukaryotic P450s are associated with microsomal membranes. their general enzymatic function is to catalyze regiospecific and stereospecific oxidation of non-activated hydrocarbons at physiological temperatures.


Pssm-ID: 395020 [Multi-domain]  Cd Length: 461  Bit Score: 74.24  E-value: 2.65e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A         93 LRKAVMKAIT-PKAPGLEQFLRDTANSLLDNL---ITEGAPADLRNDFADPLATALHCKVLGIPQE--DGP------KLF 160
Cdd:pfam00067  98 LRRFLTPTFTsFGKLSFEPRVEEEARDLVEKLrktAGEPGVIDITDLLFRAALNVICSILFGERFGslEDPkflelvKAV 177
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A        161 RSLSIAFMSSA----DPIPAAKINWDRD-----------IEYMAGILE---------NPNITTGLMGELSRLRKDPAySH 216
Cdd:pfam00067 178 QELSSLLSSPSpqllDLFPILKYFPGPHgrklkrarkkiKDLLDKLIEerretldsaKKSPRDFLDALLLAKEEEDG-SK 256
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A        217 VSD-ELFATIGvTFFGAGVISTGSFLTTALISLIQRPQLRNLLHE------------------KPELIPAGVEELLRINL 277
Cdd:pfam00067 257 LTDeELRATVL-ELFFAGTDTTSSTLSWALYELAKHPEVQEKLREeidevigdkrsptyddlqNMPYLDAVIKETLRLHP 335
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A        278 SFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPNPT--------SHLAFGRGQHFCPGSAL 349
Cdd:pfam00067 336 VVPLLLPREVTKDTVIPGYLIPKGTLVIVNLYALHRDPEVFPNPEEFDPERFLDEngkfrksfAFLPFGAGPRNCLGERL 415
                         330       340
                  ....*....|....*....|....*
6UPI_A        350 GRRHAQIGIEALL-----KKMPGVD 369
Cdd:pfam00067 416 ARMEMKLFLATLLqnfevELPPGTD 440
PLN02302 PLN02302
ent-kaurenoic acid oxidase
192-362 1.23e-11

ent-kaurenoic acid oxidase


Pssm-ID: 215171 [Multi-domain]  Cd Length: 490  Bit Score: 65.89  E-value: 1.23e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       192 LENPNITTGLMGELSRL--RKDPAYSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPELI---- 265
Cdd:PLN02302 256 SRKQNISPRKKDMLDLLldAEDENGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIakkr 335
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       266 PAG------------------VEELLR-INLSFAdgLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIEL 326
Cdd:PLN02302 336 PPGqkgltlkdvrkmeylsqvIDETLRlINISLT--VFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDP 413
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
6UPI_A       327 DR-----PNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALL 362
Cdd:PLN02302 414 SRwdnytPKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFL 454
 
Name Accession Description Interval E-value
Cyp158A-like cd11031
cytochrome P450 family 158, subfamily A and similar cytochrome P450s; This family is composed ...
17-395 8.56e-131

cytochrome P450 family 158, subfamily A and similar cytochrome P450s; This family is composed of cytochrome P450s (CYPs) with similarity to Streptomyces coelicolor CYP158A1 and CYP158A2, Streptomyces natalensis PimD (also known as CYP107E), Mycobacterium tuberculosis CYP121, and Micromonospora griseorubida MycG (also known as CYP107B). CYP158A1 and CYP158A2 catalyze an unusual oxidative C-C coupling reaction to polymerize flaviolin and form highly conjugated pigments; CYP158A2 produces three isomers of biflaviolin and one triflaviolin while CYP158A1 produces only two isomers of biflaviolin. PimD is a cytochrome P450 monooxygenase with native epoxidase activity that is critical in the biosynthesis of the polyene macrolide antibiotic pimaricin. CYP121 is essential for the viability of M. tuberculosis and is a novel drug target for the inhibition of mycobacterial growth. MycG catalyzes both hydroxylation and epoxidation reactions in the biosynthesis of the 16-membered ring macrolide antibiotic mycinamicin II. This family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410657 [Multi-domain]  Cd Length: 380  Bit Score: 380.37  E-value: 8.56e-131
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       17 IPDAVAELRTREPIRKVRTITGAEAWLVSSYALCTQVLEDRRFSMKETAAAGAPRLNALTVPPEVVNNMGNIADAGLRKA 96
Cdd:cd11031   1 PPPEYAELRREGPVARVRLPYGDEAWLVTRYADVRQVLADPRFSRAAAAPPDAPRLTPEPLLPGSLMSMDPPEHTRLRRL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       97 VMKAITPK-APGLEQFLRDTANSLLDNLITEGAPADLRNDFADPLATALHCKVLGIPQEDGPKlFRSLSIAFMSSADPIP 175
Cdd:cd11031  81 VAKAFTARrVERLRPRIEEIADELLDAMEAQGPPADLVEALALPLPVAVICELLGVPYEDRER-FRAWSDALLSTSALTP 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      176 -AAKINWDRDIEYMAGILENPNI--TTGLMGELSRLRKDpaYSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRP 252
Cdd:cd11031 160 eEAEAARQELRGYMAELVAARRAepGDDLLSALVAARDD--DDRLSEEELVTLAVGLLVAGHETTASQIGNGVLLLLRHP 237
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      253 QLRNLLHEKPELIPAGVEELLRIN-LSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPnP 331
Cdd:cd11031 238 EQLARLRADPELVPAAVEELLRYIpLGAGGGFPRYATEDVELGGVTIRAGEAVLVSLNAANRDPEVFPDPDRLDLDRE-P 316
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....
6UPI_A      332 TSHLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLAVPIDQLVWRTRFQRRIPERLPVLW 395
Cdd:cd11031 317 NPHLAFGHGPHHCLGAPLARLELQVALGALLRRLPGLRLAVPEEELRWREGLLTRGPEELPVTW 380
CYP107-like cd11029
cytochrome P450 family 107 and similar cytochrome P450s; This group contains bacterial ...
22-395 3.00e-77

cytochrome P450 family 107 and similar cytochrome P450s; This group contains bacterial cytochrome P450s from families 107 (CYP107), 154 (CYP154), 197 (CYP197), and similar proteins. Among the members of this group are: Pseudonocardia autotrophica vitamin D(3) 25-hydroxylase (also known as CYP197A; EC 1.14.15.15) that catalyzes the hydroxylation of vitamin D(3) into 25-hydroxyvitamin D(3) and 1-alpha,25-dihydroxyvitamin D(3), its physiologically active forms; Saccharopolyspora erythraea CYP107A1, also called P450eryF or 6-deoxyerythronolide B hydroxylase (EC 1.14.15.35), that catalyzes the conversion of 6-deoxyerythronolide B (6-DEB) to erythronolide B (EB) by the insertion of an oxygen at the 6S position of 6-DEB; Bacillus megaterium CYP107DY1 that displays C6-hydroxylation activity towards mevastatin to produce pravastatin; Streptomyces coelicolor CYP154C1 that shows activity towards 12- and 14-membered ring macrolactones in vitro and may be involved in catalyzing the site-specific oxidation of the precursors to macrolide antibiotics, which introduces regiochemical diversity into the macrolide ring system; and Nocardia farcinica CYP154C5 that acts on steroids with regioselectivity and stereoselectivity, converting various pregnans and androstans to yield 16 alpha-hydroxylated steroid products. Bacillus subtilis CYP107H1 is not included in this group. The CYP107-like group belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410655 [Multi-domain]  Cd Length: 384  Bit Score: 243.59  E-value: 3.00e-77
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       22 AELRTREPIRKVRTITGAEAWLVSSYALCTQVLEDRRFSMKETAAAGAPRLNALTVPPEV----VNNMGNiAD----AGL 93
Cdd:cd11029   6 ARLREQGPVHRVRLPGGVPAWLVTRYDDARAALADPRLSKDPRKAWPAFRGRAPGAPPDLppvlSDNMLT-SDppdhTRL 84
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       94 RKAVMKAITPKA-PGLEQFLRDTANSLLDNLITEGaPADLRNDFADPLATALHCKVLGIPQEDGPKlFRSLSIAFMSSAD 172
Cdd:cd11029  85 RRLVAKAFTPRRvEALRPRIEEITDELLDALAARG-VVDLVADFAYPLPITVICELLGVPEEDRDR-FRRWSDALVDTDP 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      173 PIPAAKINWDRDIEYMAGILE----NPniTTGLMGELSRLRKDPaySHVSD-ELFATIgVTFFGAGVISTGSFLTTALIS 247
Cdd:cd11029 163 PPEEAAAALRELVDYLAELVArkraEP--GDDLLSALVAARDEG--DRLSEeELVSTV-FLLLVAGHETTVNLIGNGVLA 237
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      248 LIQRPQLRNLLHEKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELD 327
Cdd:cd11029 238 LLTHPDQLALLRADPELWPAAVEELLRYDGPVALATLRFATEDVEVGGVTIPAGEPVLVSLAAANRDPARFPDPDRLDIT 317
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*...
6UPI_A      328 RPnPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLAVPIDQLVWRTRFQRRIPERLPVLW 395
Cdd:cd11029 318 RD-ANGHLAFGHGIHYCLGAPLARLEAEIALGALLTRFPDLRLAVPPDELRWRPSFLLRGLRALPVRL 384
CypX COG2124
Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism, Defense ...
1-395 2.12e-73

Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism, Defense mechanisms]; Cytochrome P450 is part of the Pathway/BioSystem: Biotin biosynthesis


Pssm-ID: 441727 [Multi-domain]  Cd Length: 400  Bit Score: 234.40  E-value: 2.12e-73
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A        1 TATVLLEVPFSARGDRIPDAV-AELRTREPIRKVRtITGAEAWLVSSYALCTQVLED-RRFSMketaaagAPRLNALTVP 78
Cdd:COG2124   4 TATPAADLPLDPAFLRDPYPFyARLREYGPVFRVR-LPGGGAWLVTRYEDVREVLRDpRTFSS-------DGGLPEVLRP 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       79 PEVVNNMGNIAD----AGLRKAVMKAITPKA-PGLEQFLRDTANSLLDNLITEGaPADLRNDFADPLATALHCKVLGIPQ 153
Cdd:COG2124  76 LPLLGDSLLTLDgpehTRLRRLVQPAFTPRRvAALRPRIREIADELLDRLAARG-PVDLVEEFARPLPVIVICELLGVPE 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      154 EDGPKLFRsLSIAFMSSADPIP-----AAKINWDRDIEYMAGILE----NPniTTGLMGELSRLRKDPaySHVSDELFAT 224
Cdd:COG2124 155 EDRDRLRR-WSDALLDALGPLPperrrRARRARAELDAYLRELIAerraEP--GDDLLSALLAARDDG--ERLSDEELRD 229
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      225 IGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPELIPAGVEELLRInLSFADGLPRLATADIQVGDVLVRKGELV 304
Cdd:COG2124 230 ELLLLLLAGHETTANALAWALYALLRHPEQLARLRAEPELLPAAVEETLRL-YPPVPLLPRTATEDVELGGVTIPAGDRV 308
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      305 LVLLEGANFDPEHFPNPGSIELDRPnPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLAVPiDQLVWRTRFQ 384
Cdd:COG2124 309 LLSLAAANRDPRVFPDPDRFDPDRP-PNAHLPFGGGPHRCLGAALARLEARIALATLLRRFPDLRLAPP-EELRWRPSLT 386
                       410
                ....*....|.
6UPI_A      385 RRIPERLPVLW 395
Cdd:COG2124 387 LRGPKSLPVRL 397
CYP105-like cd11030
cytochrome P450 family 105 and similar cytochrome P450s; This group predominantly contains ...
18-395 9.21e-72

cytochrome P450 family 105 and similar cytochrome P450s; This group predominantly contains bacterial cytochrome P450s, including those belonging to families 105 (CYP105) and 165 (CYP165). Also included in this group are fungal family 55 proteins (CYP55). CYP105s are predominantly found in bacteria belonging to the phylum Actinobacteria and the order Actinomycetales, and are associated with a wide variety of pathways and processes, from steroid biotransformation to production of macrolide metabolites. CYP105A1 catalyzes two sequential hydroxylations of vitamin D3 with differing specificity and cytochrome P450-SOY (also known as CYP105D1) has been shown to be capable of both oxidation and dealkylation reactions. CYP105D6 and CYP105P1, from the filipin biosynthetic pathway, perform highly regio- and stereospecific hydroxylations. Other members of this group include, but are not limited to: CYP165D3 (also called OxyE) from the teicoplanin biosynthetic gene cluster of Actinoplanes teichomyceticus, which is responsible for the phenolic coupling of the aromatic side chains of the first and third peptide residues in the teicoplanin peptide; Micromonospora griseorubida cytochrome P450 MycCI that catalyzes hydroxylation at the C21 methyl group of mycinamicin VIII, the earliest macrolide form in the postpolyketide synthase tailoring pathway; and Fusarium oxysporum CYP55A1 (also called nitric oxide reductase cytochrome P450nor) that catalyzes an unusual reaction, the direct electron transfer from NAD(P)H to bound heme. The CYP105-like group belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410656 [Multi-domain]  Cd Length: 381  Bit Score: 229.33  E-value: 9.21e-72
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       18 PDAVAELRTREPIRKVRTITGAEAWLVSSYALCTQVLEDRRFSMKETAAaGAPRLNALTVPPEV----VNNMGNIADAGL 93
Cdd:cd11030   2 PAEYAELREEGPVSRVTLPDGRPAWLVTGHDEVRAVLADPRFSSDRTRP-GFPALSPEGKAAAAlpgsFIRMDPPEHTRL 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       94 RKAVMKAITPK-APGLEQFLRDTANSLLDNLITEGAPADLRNDFADPLATALHCKVLGIPQEDGPkLFRSLSIAFMSSAD 172
Cdd:cd11030  81 RRMLAPEFTVRrVRALRPRIQEIVDELLDAMEAAGPPADLVEAFALPVPSLVICELLGVPYEDRE-FFQRRSARLLDLSS 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      173 PIPAAKINWDRDIEYMAGIL----ENPniTTGLMGELsrLRKDPAYSHVSDELFATIGVTFFGAGVISTGSFLTTALISL 248
Cdd:cd11030 160 TAEEAAAAGAELRAYLDELVarkrREP--GDDLLSRL--VAEHGAPGELTDEELVGIAVLLLVAGHETTANMIALGTLAL 235
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      249 IQRPQLRNLLHEKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR 328
Cdd:cd11030 236 LEHPEQLAALRADPSLVPGAVEELLRYLSIVQDGLPRVATEDVEIGGVTIRAGEGVIVSLPAANRDPAVFPDPDRLDITR 315
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|....*..
6UPI_A      329 PnPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLAVPIDQLVWRTRFQRRIPERLPVLW 395
Cdd:cd11030 316 P-ARRHLAFGHGVHQCLGQNLARLELEIALPTLFRRFPGLRLAVPAEELPFRPDSLVYGVHELPVTW 381
CYP130-like cd11078
cytochrome P450 family 130-like and similar cytochrome P450s; This subfamily includes ...
19-395 4.27e-65

cytochrome P450 family 130-like and similar cytochrome P450s; This subfamily includes Mycobacterium tuberculosis cytochrome P450 130 (CYP130), Rhodococcus erythropolis CYP116, and similar bacterial proteins. CYP130 catalyzes the N-demethylation of dextromethorphan, and has also shown a natural propensity to bind primary arylamines. CYP116 is involved in the degradation of thiocarbamate herbicides. The CYP130-like subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410700 [Multi-domain]  Cd Length: 380  Bit Score: 212.08  E-value: 4.27e-65
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       19 DAVAELRTREPIRKVRTITgaeAWLVSSYALCTQVLED-RRFSMKETAAAGAP-RLNALTVPPEVVNNMGNIADAGLRKA 96
Cdd:cd11078   2 PFYARLRDEEPVFFSEPLG---YWVVSRYEDVKAVLRDpQTFSSAGGLTPESPlWPEAGFAPTPSLVNEDPPRHTRLRRL 78
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       97 VMKAITPKA-PGLEQFLRDTANSLLDNLITEGaPADLRNDFADPLATALHCKVLGIPQEDgPKLFRSLSIAFMSSADPIP 175
Cdd:cd11078  79 VSRAFTPRRiAALEPRIRELAAELLDRLAEDG-RADFVADFAAPLPALVIAELLGVPEED-MERFRRWADAFALVTWGRP 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      176 ---------AAKINWDRdieYMAGILE----NPniTTGLMGELSRLRKDPAySHVSDELFATIGVTFFGAGVISTGSFLT 242
Cdd:cd11078 157 seeeqveaaAAVGELWA---YFADLVAerrrEP--RDDLISDLLAAADGDG-ERLTDEELVAFLFLLLVAGHETTTNLLG 230
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      243 TALISLIQRPQLRNLLHEKPELIPAGVEELLRINLSFAdGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPG 322
Cdd:cd11078 231 NAVKLLLEHPDQWRRLRADPSLIPNAVEETLRYDSPVQ-GLRRTATRDVEIGGVTIPAGARVLLLFGSANRDERVFPDPD 309
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
6UPI_A      323 SIELDRPNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDlaVPIDQLVWRTRFQRRIPERLPVLW 395
Cdd:cd11078 310 RFDIDRPNARKHLTFGHGIHFCLGAALARMEARIALEELLRRLPGMR--VPGQEVVYSPSLSFRGPESLPVEW 380
CYP164-like cd20625
cytochrome P450 family 164 and similar cytochrome P450s; This group is composed mostly of ...
41-393 1.70e-57

cytochrome P450 family 164 and similar cytochrome P450s; This group is composed mostly of bacterial cytochrome P450s from multiple families, including Mycobacterium smegmatis CYP164A2, Streptomyces sp. CYP245A1, Bacillus subtilis CYP107H1, Micromonospora echinospora P450 oxidase Calo2, and putative P450s such as Xylella fastidiosa CYP133 and Mycobacterium tuberculosis CYP140. CYP107H1, also called cytochrome P450(BioI), catalyzes the C-C bond cleavage of fatty acid linked to acyl carrier protein (ACP) to generate pimelic acid for biotin biosynthesis. CYP245A1, also called cytochrome P450 StaP, catalyzes the intramolecular C-C bond formation and oxidative decarboxylation of chromopyrrolic acid (CPA) to form the indolocarbazole core, a key step in staurosporine biosynthesis. CalO2 is involved in calicheamicin biosynthesis. The CYP164-like group belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410718 [Multi-domain]  Cd Length: 369  Bit Score: 192.00  E-value: 1.70e-57
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       41 AWLVSSYALCTQVLEDRRFSMKETAAAGAPRLNALTVPPE---VVNNMGNI--ADAG-LRKAVMKAITPKA-PGLEQFLR 113
Cdd:cd20625  10 AWVVTRHADVSAVLRDPRFGSDDPEAAPRRRGGEAALRPLarlLSRSMLFLdpPDHTrLRRLVSKAFTPRAvERLRPRIE 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      114 DTANSLLDNLITEGaPADLRNDFADPLATALHCKVLGIPQEDGPKlFRSLSIAFMSSADPIPAakinWDRDIEYMAGILE 193
Cdd:cd20625  90 RLVDELLDRLAARG-RVDLVADFAYPLPVRVICELLGVPEEDRPR-FRGWSAALARALDPGPL----LEELARANAAAAE 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      194 npniTTGLMGEL-SRLRKDPAYSHVS--------------DELFATIgVTFFGAGVISTGSFLTTALISLIQRPQLRNLL 258
Cdd:cd20625 164 ----LAAYFRDLiARRRADPGDDLISalvaaeedgdrlseDELVANC-ILLLVAGHETTVNLIGNGLLALLRHPEQLALL 238
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      259 HEKPELIPAGVEELLRInlsfaDG----LPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPNPTsH 334
Cdd:cd20625 239 RADPELIPAAVEELLRY-----DSpvqlTARVALEDVEIGGQTIPAGDRVLLLLGAANRDPAVFPDPDRFDITRAPNR-H 312
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|....*....
6UPI_A      335 LAFGRGQHFCPGSALGRRHAQIGIEALLKKMPgvDLAVPIDQLVWRTRFQRRIPERLPV 393
Cdd:cd20625 313 LAFGAGIHFCLGAPLARLEAEIALRALLRRFP--DLRLLAGEPEWRPSLVLRGLRSLPV 369
CYP142-like cd11033
cytochrome P450 family 142 and similar cytochrome P450s; This family is composed of cytochrome ...
22-371 1.14e-45

cytochrome P450 family 142 and similar cytochrome P450s; This family is composed of cytochrome P450s (CYPs) with similarity to Streptomyces sp. P450sky (also called CYP163B3), Sphingopyxis macrogoltabida P450pyr hydroxylase, Novosphingobium aromaticivorans CYP108D1, Pseudomonas sp. cytochrome P450-Terp (P450terp), and Amycolatopsis balhimycina P450 OxyD, as well as several Mycobacterium proteins CYP124, CYP125, CYP126, and CYP142. P450sky is involved in the hydroxylation of three beta-hydroxylated amino acid precursors required for the biosynthesis of the cyclic depsipeptide skyllamycin. P450pyr hydroxylase is an active and selective catalyst for the regio- and stereo-selective hydroxylation at non-activated carbon atoms with a broad substrate range. P450terp catalyzes the hydroxylation of alpha-terpineol as part of its catabolic assimilation. OxyD is involved in beta-hydroxytyrosine formation during vancomycin biosynthesis. CYP124 is a methyl-branched lipid omega-hydroxylase while CYP142 is a cholesterol 27-oxidase with likely roles in host response modulation and cholesterol metabolism. This family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410659 [Multi-domain]  Cd Length: 378  Bit Score: 161.16  E-value: 1.14e-45
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       22 AELRTREPIRKVRTITGAEA-WLVSSYALCTQVLED-RRFSmketAAAGA--PRLNALTVPPEVVNNMGNIAD---AGLR 94
Cdd:cd11033   2 ARLRAEAPVHWHPPPDGGPGfWAVTRHADVVAVSRDpELFS----SARGGvlIDLPEEDADPAAGRMLINMDPprhTRLR 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       95 KAVMKAITPKA-PGLEQFLRDTANSLLDNLItEGAPADLRNDFADPLATALHCKVLGIPQEDGPKLFRsLSIAFMSSADP 173
Cdd:cd11033  78 RLVSRAFTPRAvARLEDRIRERARRLVDRAL-ARGECDFVEDVAAELPLQVIADLLGVPEEDRPKLLE-WTNELVGADDP 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      174 IPAAKINWDRD------IEYMAGILE----NPniTTGLMGELSRLRKDPAysHVSDELFATIGVTFFGAGVISTGSFLTT 243
Cdd:cd11033 156 DYAGEAEEELAaalaelFAYFRELAEerraNP--GDDLISVLANAEVDGE--PLTDEEFASFFILLAVAGNETTRNSISG 231
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      244 ALISLIQRPQLRNLLHEKPELIPAGVEELLRIN---LSFAdglpRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPN 320
Cdd:cd11033 232 GVLALAEHPDQWERLRADPSLLPTAVEEILRWAspvIHFR----RTATRDTELGGQRIRAGDKVVLWYASANRDEEVFDD 307
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|..
6UPI_A      321 PGSIELDR-PNPtsHLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLA 371
Cdd:cd11033 308 PDRFDITRsPNP--HLAFGGGPHFCLGAHLARLELRVLFEELLDRVPDIELA 357
P450_EryK-like cd11032
cytochrome P450 EryK and similar cytochrome P450s; This subfamily contains archaeal and ...
25-368 2.32e-44

cytochrome P450 EryK and similar cytochrome P450s; This subfamily contains archaeal and bacterial CYPs including Saccharopolyspora erythraea P450 EryK, Saccharolobus solfataricus cytochrome P450 119 (CYP119), Picrophilus torridus CYP231A2, Bacillus subtilis CYP109, Streptomyces himastatinicus HmtT and HmtN, and Bacillus megaterium CYP106A2, among others. EryK, also called erythromycin C-12 hydroxylase, is active during the final steps of erythromycin A (ErA) biosynthesis. CYP106A2 catalyzes the hydroxylation of a variety of 3-oxo-delta(4)-steroids such as progesterone and deoxycorticosterone, mainly in the 15beta-position. It is also capable of hydroxylating a variety of terpenoids. HmtT and HmtN is involved in the post-tailoring of the cyclohexadepsipeptide backbone during the biosynthesis of the himastatin antibiotic. The EryK-like subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410658 [Multi-domain]  Cd Length: 368  Bit Score: 157.38  E-value: 2.32e-44
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       25 RTREPIRKVRTiTGAeaWLVSSYALCTQVLED-RRFS--MKETAAAGAPRLNALTV----PPEVVNnmgniadagLRKAV 97
Cdd:cd11032   1 REESPVYYDEE-TGA--WHVFRYADVKRVLSDpATFSsdLGRLLPGEDDALTEGSLltmdPPRHRK---------LRKLV 68
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       98 MKAITPKA-PGLEQFLRDTANSLLDNLITEGApADLRNDFADPLATALHCKVLGIPQEDGPkLFRSLSIAFMSSADPIPA 176
Cdd:cd11032  69 SQAFTPRLiADLEPRIAEITDELLDAVDGRGE-FDLVEDLAYPLPVIVIAELLGVPAEDRE-LFKKWSDALVSGLGDDSF 146
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      177 AKINWDRD-------IEYMAGILE----NPniTTGLMGELSRLRKDPAysHVSDELFATIGVTFFGAGVISTGSFLTTAL 245
Cdd:cd11032 147 EEEEVEEMaealrelNAYLLEHLEerrrNP--RDDLISRLVEAEVDGE--RLTDEEIVGFAILLLIAGHETTTNLLGNAV 222
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      246 ISLIQRPQLRNLLHEKPELIPAGVEELLRINLSFAdGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIE 325
Cdd:cd11032 223 LCLDEDPEVAARLRADPSLIPGAIEEVLRYRPPVQ-RTARVTTEDVELGGVTIPAGQLVIAWLASANRDERQFEDPDTFD 301
                       330       340       350       360
                ....*....|....*....|....*....|....*....|...
6UPI_A      326 LDRpNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGV 368
Cdd:cd11032 302 IDR-NPNPHLSFGHGIHFCLGAPLARLEARIALEALLDRFPRI 343
P450cin-like cd11034
P450cin and similar cytochrome P450s; This group is composed of Citrobacter braakii cytochrome ...
41-393 4.67e-43

P450cin and similar cytochrome P450s; This group is composed of Citrobacter braakii cytochrome P450cin (P450cin, also called CYP176A1) and similar proteins. P450cin is a bacterial P450 enzyme that catalyzes the enantiospecific hydroxylation of 1,8-cineole to (1R)-6beta-hydroxycineole; its natural reduction-oxidation partner is cindoxin. This family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410660 [Multi-domain]  Cd Length: 361  Bit Score: 153.65  E-value: 4.67e-43
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       41 AWLVSSYALCTQVLED-RRFSMKETAAA----GAPRLNALTV-PPEvvnnmgniaDAGLRKAVMKAITPKA-PGLEQFLR 113
Cdd:cd11034  15 FWVLTRYAEVQAVARDtDTFSSKGVTFPrpelGEFRLMPIETdPPE---------HKKYRKLLNPFFTPEAvEAFRPRVR 85
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      114 DTANSLLDNLITEGApADLRNDFADPLATALHCKVLGIPQEDGPKLFRSlSIAFMSSADPiPAAKINWDRDIEYMAGILE 193
Cdd:cd11034  86 QLTNDLIDAFIERGE-CDLVTELANPLPARLTLRLLGLPDEDGERLRDW-VHAILHDEDP-EEGAAAFAELFGHLRDLIA 162
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      194 ----NPN---ITTGLMGE-----LSRlrkdpayshvsDELFATIGVTFFGaGVISTGSFLTTALISLIQRPQLRNLLHEK 261
Cdd:cd11034 163 erraNPRddlISRLIEGEidgkpLSD-----------GEVIGFLTLLLLG-GTDTTSSALSGALLWLAQHPEDRRRLIAD 230
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      262 PELIPAGVEELLRINLSFAdGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPnPTSHLAFGRGQ 341
Cdd:cd11034 231 PSLIPNAVEEFLRFYSPVA-GLARTVTQEVEVGGCRLKPGDRVLLAFASANRDEEKFEDPDRIDIDRT-PNRHLAFGSGV 308
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|...
6UPI_A      342 HFCPGSALGRRHAQIGIEALLKKMPgvDLAVPIDQLV-WRTRFQRRIPERLPV 393
Cdd:cd11034 309 HRCLGSHLARVEARVALTEVLKRIP--DFELDPGATCeFLDSGTVRGLRTLPV 359
cytochrome_P450 cd00302
cytochrome P450 (CYP) superfamily; Cytochrome P450 (P450, CYP) is a large superfamily of ...
29-392 9.78e-43

cytochrome P450 (CYP) superfamily; Cytochrome P450 (P450, CYP) is a large superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs with > 40% sequence identity are members of the same family. There are approximately 2250 CYP families: mammals, insects, plants, fungi, bacteria, and archaea have around 18, 208, 277, 805, 591, and 14 families, respectively. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop. Their monooxygenase activity relies on the reductive scission of molecular oxygen bound to the P450 heme iron, and the delivery of two electrons to the heme iron during the catalytic cycle. CYPs use a variety of redox partners, such as the eukaryotic diflavin enzyme NADPH-cytochrome P450 oxidoreductase and the bacterial/mitochondrial NAD(P)H-ferredoxin reductase and ferredoxin partners. Some CYPs are naturally linked to their redox partners and others have evolved to bypass requirements for redox partners, and instead react directly with hydrogen peroxide or NAD(P)H to facilitate oxidative or reductive catalysis.


Pssm-ID: 410651 [Multi-domain]  Cd Length: 391  Bit Score: 153.82  E-value: 9.78e-43
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       29 PIRKVRtITGAEAWLVSSYALCTQVLEDRRFSmkeTAAAGAPRLNALTVPPEVVNNMGNIADAGLRKAVMKAITPKA-PG 107
Cdd:cd00302   2 PVFRVR-LGGGPVVVVSDPELVREVLRDPRDF---SSDAGPGLPALGDFLGDGLLTLDGPEHRRLRRLLAPAFTPRAlAA 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      108 LEQFLRDTANSLLDNLITEGAPADLRNDFADPLATALHCKVLGIPQEDGP---------KLFRSLSIAFMSSADPIPAAK 178
Cdd:cd00302  78 LRPVIREIARELLDRLAAGGEVGDDVADLAQPLALDVIARLLGGPDLGEDleelaelleALLKLLGPRLLRPLPSPRLRR 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      179 INWDRDI--EYMAGILENPNITTGLMGELSRLRKDPAYSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRN 256
Cdd:cd00302 158 LRRARARlrDYLEELIARRRAEPADDLDLLLLADADDGGGLSDEEIVAELLTLLLAGHETTASLLAWALYLLARHPEVQE 237
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      257 LLHE---------------KPELIPAGVEELLRINlSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNP 321
Cdd:cd00302 238 RLRAeidavlgdgtpedlsKLPYLEAVVEETLRLY-PPVPLLPRVATEDVELGGYTIPAGTLVLLSLYAAHRDPEVFPDP 316
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
6UPI_A      322 GSIELDR------PNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPgvDLAVPIDQLVWRTRFQRRIPERLP 392
Cdd:cd00302 317 DEFDPERflpereEPRYAHLPFGAGPHRCLGARLARLELKLALATLLRRFD--FELVPDEELEWRPSLGTLGPASLP 391
P450cam-like cd11035
P450cam and similar cytochrome P450s; This family is composed of cytochrome P450s (CYPs) with ...
33-395 1.10e-38

P450cam and similar cytochrome P450s; This family is composed of cytochrome P450s (CYPs) with similarity to Pseudomonas putida P450cam and Cyp101 proteins from Novosphingobium aromaticivorans such as CYP101C1 and CYP101D2. P450cam catalyzes the hydroxylation of camphor in a process that involves two electron transfers from the iron-sulfur protein, putidaredoxin. CYP101D2 is capable of oxidizing camphor while CYP101C1 does not bind camphor but is capable of binding and hydroxylating ionone derivatives such as alpha- and beta-ionone and beta-damascone. This family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410661 [Multi-domain]  Cd Length: 359  Bit Score: 141.96  E-value: 1.10e-38
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       33 VRTITGAEAWLVSSYALCTQVLED-RRFSMKetaaagaprlnALTVPPEVVNNMGNI-------ADAGLRKAVMKAITPK 104
Cdd:cd11035   7 VYTPRNGGHWIVTRGEDIREVLRDpETFSSR-----------VITVPPPAGEPYPLIpleldppEHTRYRRLLNPLFSPK 75
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      105 A-PGLEQFLRDTANSLLDNLITEGApADLRNDFADPLATALHCKVLGIPQEDGPKlFRSLSIAF--MSSADPIPAAKINW 181
Cdd:cd11035  76 AvAALEPRIRERAVELIESFAPRGE-CDFVADFAEPFPTRVFLELMGLPLEDLDR-FLEWEDAMlrPDDAEERAAAAQAV 153
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      182 drdIEYMAGILE----NPN---ITTGLMGELSRLRkdpaysHVSDELFaTIGVTFFGAGVISTGSFLTTALISLIQRPQL 254
Cdd:cd11035 154 ---LDYLTPLIAerraNPGddlISAILNAEIDGRP------LTDDELL-GLCFLLFLAGLDTVASALGFIFRHLARHPED 223
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      255 RNLLHEKPELIPAGVEELLRINLSFAdgLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRpNPTSH 334
Cdd:cd11035 224 RRRLREDPELIPAAVEELLRRYPLVN--VARIVTRDVEFHGVQLKAGDMVLLPLALANRDPREFPDPDTVDFDR-KPNRH 300
                       330       340       350       360       370       380
                ....*....|....*....|....*....|....*....|....*....|....*....|.
6UPI_A      335 LAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLAvPIDQLVWRTRFQRRIpERLPVLW 395
Cdd:cd11035 301 LAFGAGPHRCLGSHLARLELRIALEEWLKRIPDFRLA-PGAQPTYHGGSVMGL-ESLPLVW 359
CYP_AurH-like cd11038
cytochrome P450 AurH and similar cytochrome P450s; This group includes Streptomyces thioluteus ...
10-393 1.24e-36

cytochrome P450 AurH and similar cytochrome P450s; This group includes Streptomyces thioluteus P450 monooxygenase AurH which is uniquely capable of forming a homochiral tetrahydrofuran ring, a vital component of the polyketide antibiotic aureothin. AurH catalyzes an unprecedented tandem oxygenation process: first, it catalyzes an asymmetric hydroxylation of deoxyaureothin to yield (7R)-7-hydroxydeoxyaureothin as an intermediate; and second, it mediates another C-O bond formation that leads to O-heterocyclization. The AurH-like subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410664 [Multi-domain]  Cd Length: 382  Bit Score: 137.11  E-value: 1.24e-36
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       10 FSARGDRipdaVAELRTREPIrkVRTITGaeaWLVSSYALCTQVLEDRRFsmkETAAAGAPRLNALTVPP---EVVNNMG 86
Cdd:cd11038   5 FSWDSPE----VAEAREKSWY--ARTPYG---LAVLRYEEVGQLLRDRRL---RQGGHRWLAMNGVTEGPfadWWVDFLL 72
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       87 NI--AD-AGLRKAVMKAITPKA-PGLEQFLRDTANSLLDNlITEGAPADLRNDFADPLATALHCKVLGIPQEDGPK---- 158
Cdd:cd11038  73 SLegADhARLRGLVNPAFTPKAvEALRPRFRATANDLIDG-FAEGGECEFVEAFAEPYPARVICTLLGLPEEDWPRvhrw 151
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      159 ---LFRSLSIAFMSSADPIPAAkinWDRDIEYMAGILEnpnittglmgelsRLRKDPAYSHVSD--------------EL 221
Cdd:cd11038 152 sadLGLAFGLEVKDHLPRIEAA---VEELYDYADALIE-------------ARRAEPGDDLISTlvaaeqdgdrlsdeEL 215
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      222 FATIGVTFFGaGVISTGSFLTTALISLIQRPQLRNLLHEKPELIPAGVEELLRinlsFADGLP---RLATADIQVGDVLV 298
Cdd:cd11038 216 RNLIVALLFA-GVDTTRNQLGLAMLTFAEHPDQWRALREDPELAPAAVEEVLR----WCPTTTwatREAVEDVEYNGVTI 290
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      299 RKGELVLVLLEGANFDPEHFPNPG-SIELDRPnptSHLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLAVPIdql 377
Cdd:cd11038 291 PAGTVVHLCSHAANRDPRVFDADRfDITAKRA---PHLGFGGGVHHCLGAFLARAELAEALTVLARRLPTPAIAGEP--- 364
                       410
                ....*....|....*.
6UPI_A      378 VWRTRFQRRIPERLPV 393
Cdd:cd11038 365 TWLPDSGNTGPATLPL 380
P450_epoK-like cd20630
cytochrome P450epok and similar cytochrome P450s; Sorangium cellulosum cytochrome P450epoK is ...
41-373 2.31e-33

cytochrome P450epok and similar cytochrome P450s; Sorangium cellulosum cytochrome P450epoK is a heme-containing monooxygenase which participates in epothilone biosynthesis where it catalyzes the epoxidation of epothilones C and D into epothilones A and B, respectively. This subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410723 [Multi-domain]  Cd Length: 373  Bit Score: 127.93  E-value: 2.31e-33
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       41 AWLVSSYALCTQVLEDRRFSMKETAAAGAPRLnALTVPPEVVNNMGN------IAD-AGLRKAVMKAITPKA-PGLEQFL 112
Cdd:cd20630  11 AWVMTRMEDVMAVLRDPRLSADRREWEFAAEL-PLADEPSLARLIKGglfllaPEDhARVRKLVAPAFTPRAiDRLRAEI 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      113 RDTANSLLDNLITEGAPADLRnDFADPLATALHCKVLGIPqEDGPKLFRSLSIAFMSSADPI----------PAAKINWD 182
Cdd:cd20630  90 QAIVDQLLDELGEPEEFDVIR-EIAEHIPFRVISAMLGVP-AEWDEQFRRFGTATIRLLPPGldpeeletaaPDVTEGLA 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      183 RDIEYMAGILENPNITTGLMGELSRLRKDPAYShvSDELFATIGVtFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKP 262
Cdd:cd20630 168 LIEEVIAERRQAPVEDDLLTTLLRAEEDGERLS--EDELMALVAA-LIVAGTDTTVHLITFAVYNLLKHPEALRKVKAEP 244
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      263 ELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRpNPTSHLAFGRGQH 342
Cdd:cd20630 245 ELLRNALEEVLRWDNFGKMGTARYATEDVELCGVTIRKGQMVLLLLPSALRDEKVFSDPDRFDVRR-DPNANIAFGYGPH 323
                       330       340       350
                ....*....|....*....|....*....|.
6UPI_A      343 FCPGSALGRRHAQIGIEALLKKMPGVDLAVP 373
Cdd:cd20630 324 FCIGAALARLELELAVSTLLRRFPEMELAEP 354
P450_pinF1-like cd20629
cytochrome P450-pinF1 and similar cytochrome P450s; This subfamily is composed of bacterial ...
42-370 6.35e-32

cytochrome P450-pinF1 and similar cytochrome P450s; This subfamily is composed of bacterial CYPs similar to Agrobacterium tumefaciens plant-inducible cytochrome P450-pinF1, which is not essential for virulence but may be involved in the detoxification of plant protective agents at the site of wounding. The P450-pinF1-like subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410722 [Multi-domain]  Cd Length: 353  Bit Score: 123.56  E-value: 6.35e-32
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       42 WLVSSYALCTQVLED-RRFSMKETAAAGAP---RLNALTvppevvnnMGNIADAGLRKAVMKAITPKAPG--LEQFLRDT 115
Cdd:cd20629  12 YVLLRHDDVMAVLRDpRTFSSETYDATLGGpflGHSILA--------MDGEEHRRRRRLLQPAFAPRAVArwEEPIVRPI 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      116 ANSLLDNLITEGApADLRNDFADPLATALHCKVLGIPQEDGP-------KLFRSLSIAFMSSADPIPAAKINWDrdiEYM 188
Cdd:cd20629  84 AEELVDDLADLGR-ADLVEDFALELPARVIYALLGLPEEDLPeftrlalAMLRGLSDPPDPDVPAAEAAAAELY---DYV 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      189 AGILENPNITTG--LMGELSRLRKDPaySHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPELIP 266
Cdd:cd20629 160 LPLIAERRRAPGddLISRLLRAEVEG--EKLDDEEIISFLRLLLPAGSDTTYRALANLLTLLLQHPEQLERVRRDRSLIP 237
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      267 AGVEELLRINLSFAdGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPnPTSHLAFGRGQHFCPG 346
Cdd:cd20629 238 AAIEEGLRWEPPVA-SVPRMALRDVELDGVTIPAGSLLDLSVGSANRDEDVYPDPDVFDIDRK-PKPHLVFGGGAHRCLG 315
                       330       340
                ....*....|....*....|....
6UPI_A      347 SALGRRHAQIGIEALLKKMPGVDL 370
Cdd:cd20629 316 EHLARVELREALNALLDRLPNLRL 339
CYP_unk cd20623
unknown subfamily of actinobacterial cytochrome P450s; This subfamily is composed of ...
38-393 2.83e-31

unknown subfamily of actinobacterial cytochrome P450s; This subfamily is composed of uncharacterized cytochrome P450s. Cytochrome P450 (P450, CYP) is a large superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop. Their monooxygenase activity relies on the reductive scission of molecular oxygen bound to the P450 heme iron, and the delivery of two electrons to the heme iron during the catalytic cycle.


Pssm-ID: 410716 [Multi-domain]  Cd Length: 367  Bit Score: 121.99  E-value: 2.83e-31
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       38 GAEAWLVSSYALCTQVLED-RRFS---------MKETAAAGAPRLNALTVPPEVVNNMGNiADAGLRKAVMKAITPKAP- 106
Cdd:cd20623  11 GVPAWLVLGYREALQVLRDpELFArdprrwrawDEGRVPPDWPLLPMVGWRPNALFADGE-EHRRLRAAITDALGAVDQh 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      107 GLEQFLRDTANSLLDNLITEGApADLRNDFADPLATALHCKVLGIPQEDGPKLFRSLSIAFMSSADPIPAakinWDRDIE 186
Cdd:cd20623  90 ELRRHVERIADELIDGFAGAGR-ADLVAQYARPLPMLVLARLFGLPDEEGDRLVEDLAAMIDGGEDALAA----NARLVG 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      187 YMAGILE------NPNITTGLMGELSRLRKDpaysHVSDELFATIGvtffgAGVISTGSFLTTALISLIQRPQLRNLLHE 260
Cdd:cd20623 165 ALRELVAlrrarpGDDLTSRLLAHPAGLTDE----EVVHDLVLLLG-----AGHEPTTNLIGNTLRLMLTDPRFAASLSG 235
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      261 KPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRpnpTSHLAFGRG 340
Cdd:cd20623 236 GRLSVREALNEVLWRDPPLANLAGRFAARDTELGGQWIRAGDLVVLGLAAANADPRVRPDPGASMSGN---RAHLAFGAG 312
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|...
6UPI_A      341 QHFCPGSALGRRHAQIGIEALLKKMPGVDLAVPIDQLVWRTRFQRRIPERLPV 393
Cdd:cd20623 313 PHRCPAQELAETIARTAVEVLLDRLPDLELAVPPDQLRWRPSPWHRGLRALPV 365
CYP134A1 cd11080
cytochrome P450 family 134, subfamily A, polypeptide 1; Cytochrome P450 134A1 (CYP134A1, EC 1. ...
39-371 2.84e-30

cytochrome P450 family 134, subfamily A, polypeptide 1; Cytochrome P450 134A1 (CYP134A1, EC 1.14.15.13), also called pulcherriminic acid synthase or cyclo-L-leucyl-L-leucyl dipeptide oxidase or cytochrome P450 CYPX, catalyzes the oxidation of cyclo(L-Leu-L-Leu) (cLL) to yield pulcherriminic acid which forms the red pigment pulcherrimin via a non-enzymatic spontaneous reaction with Fe(3+). It belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410702 [Multi-domain]  Cd Length: 370  Bit Score: 119.50  E-value: 2.84e-30
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       39 AEAWLVSSYALCTQVLEDRR-FSMKETAAAGAPRLNAltvppEVVNNMGNIADAGLRKAVMKAITPKApgLEQFL---RD 114
Cdd:cd11080   9 IDSYFVSRYEDVRRILKDPDgFTTKSLAERAEPVMRG-----PVLAQMTGKEHAAKRAIVVRAFRGDA--LDHLLpliKE 81
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      115 TANSLLDNLITEGApADLRNDFADPLATALHCKVLGIPQEDGPKL---FRSLsIAFMS--SADPIPAAKINWDRDI--EY 187
Cdd:cd11080  82 NAEELIAPFLERGR-VDLVNDFGKPFAVNVTMDMLGLDKRDHEKIhewHSSV-AAFITslSQDPEARAHGLRCAEQlsQY 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      188 MAGILE----NPN---ITTGLMGELSRLRkdpayshVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHE 260
Cdd:cd11080 160 LLPVIEerrvNPGsdlISILCTAEYEGEA-------LSDEDIKALILNVLLAATEPADKTLALMIYHLLNNPEQLAAVRA 232
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      261 KPELIPAGVEELLRINLSfADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRP--NPTS----- 333
Cdd:cd11080 233 DRSLVPRAIAETLRYHPP-VQLIPRQASQDVVVSGMEIKKGTTVFCLIGAANRDPAAFEDPDTFNIHREdlGIRSafsga 311
                       330       340       350       360
                ....*....|....*....|....*....|....*....|
6UPI_A      334 --HLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLA 371
Cdd:cd11080 312 adHLAFGSGRHFCVGAALAKREIEIVANQVLDALPNIRLE 351
CYP199A2-like cd11037
cytochrome P450 family 199, subfamily A, polypeptide 2 and similar cytochrome P450s; This ...
41-393 2.02e-25

cytochrome P450 family 199, subfamily A, polypeptide 2 and similar cytochrome P450s; This family is composed of cytochrome P450s (CYPs) with similarity to Rhodopseudomonas palustris CYP199A2 and CYP199A4. CYP199A2 catalyzes the oxidation of aromatic carboxylic acids including indole-2-carboxylic acid, 2-naphthoic acid and 4-ethylbenzoic acid. CYP199A4 catalyzes the hydroxylation of para-substituted benzoic acids. This family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410663 [Multi-domain]  Cd Length: 371  Bit Score: 106.13  E-value: 2.02e-25
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       41 AWLVSSYALCTQVLED-RRFSmketAAAGAPrlnaltvPPEVVNNM--GNI--AD----AGLRKAVMKAITPKA-PGLEQ 110
Cdd:cd11037  23 VYALARYDEVRAALRDhETFS----SARGVG-------LNDFLNWRlpGSIlaSDppehDRLRAVLSRPLSPRAlRKLRD 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      111 FLRDTANSLLDNLITEGApADLRNDFADPLATALHCKVLGIPQEDGPKLFRSLSIAFMSSADP-------IPAAKinwdr 183
Cdd:cd11037  92 RIEEAADELVDELVARGE-FDAVTDLAEAFPLRVVPDLVGLPEEGRENLLPWAAATFNAFGPLnertraaLPRLK----- 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      184 diEYMAGILEN---PNITTGLMGelSRLRKDPAYSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRP-QLRnLLH 259
Cdd:cd11037 166 --ELRDWVAEQcarERLRPGGWG--AAIFEAADRGEITEDEAPLLMRDYLSAGLDTTISAIGNALWLLARHPdQWE-RLR 240
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      260 EKPELIPAGVEELLRINlSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRpNPTSHLAFGR 339
Cdd:cd11037 241 ADPSLAPNAFEEAVRLE-SPVQTFSRTTTRDTELAGVTIPAGSRVLVFLGSANRDPRKWDDPDRFDITR-NPSGHVGFGH 318
                       330       340       350       360       370
                ....*....|....*....|....*....|....*....|....*....|....
6UPI_A      340 GQHFCPGSALGRRHAQIGIEALLKKmpgVDLAVPIDQLVWRTRFQRRIPERLPV 393
Cdd:cd11037 319 GVHACVGQHLARLEGEALLTALARR---VDRIELAGPPVRALNNTLRGLASLPV 369
Cyp_unk cd11079
unknown subfamily of mostly bacterial cytochrome P450s; This subfamily is composed of ...
42-373 6.16e-24

unknown subfamily of mostly bacterial cytochrome P450s; This subfamily is composed of uncharacterized cytochrome P450s, predominantly from bacteria. Cytochrome P450 (P450, CYP) is a large superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop. Their monooxygenase activity relies on the reductive scission of molecular oxygen bound to the P450 heme iron, and the delivery of two electrons to the heme iron during the catalytic cycle.


Pssm-ID: 410701 [Multi-domain]  Cd Length: 350  Bit Score: 101.28  E-value: 6.16e-24
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       42 WLVSSYALCTQVLED-RRFSmketaaagaprlNALTVPPEVVNNMGNIADAGLRKAVMKAITPKApgLEQF---LRDTAN 117
Cdd:cd11079  11 WVVLRHADVKAAAEDpETFS------------SAVSARLSVPNGMDPPEHTAYRAAIDRYFTPER--LARFepvCRRVAA 76
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      118 SLLDNLItEGAPADLRNDFADPLATALHCKVLGIPQEDGPKLF--------------RSLSIAFMSSADPIPAAKINWDR 183
Cdd:cd11079  77 RLVAELP-AGGGGDVVGQFAQPFAVRVQTAFLGWPAALERPLAewvnknhaatrsgdRAATAEVAEEFDGIIRDLLADRR 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      184 DIEYMAgileNPNITTGLMGElsRLRKDPayshVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPE 263
Cdd:cd11079 156 AAPRDA----DDDVTARLLRE--RVDGRP----LTDEEIVSILRNWTVGELGTIAACVGVLVHYLARHPELQARLRANPA 225
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      264 LIPAGVEELLRINLSFAdGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRpNPTSHLAFGRGQHF 343
Cdd:cd11079 226 LLPAAIDEILRLDDPFV-ANRRITTRDVELGGRTIPAGSRVTLNWASANRDERVFGDPDEFDPDR-HAADNLVYGRGIHV 303
                       330       340       350
                ....*....|....*....|....*....|
6UPI_A      344 CPGSALGRRHAQIGIEALLKKMPGVDLAVP 373
Cdd:cd11079 304 CPGAPLARLELRILLEELLAQTEAITLAAG 333
P450-pinF2-like cd11039
P450-pinF2 and similar cytochrome P450s; This family is composed of cytochrome P450s (CYPs) ...
22-395 3.02e-22

P450-pinF2 and similar cytochrome P450s; This family is composed of cytochrome P450s (CYPs) with similarity to Agrobacterium tumefaciens P450-pinF2, whose expression is induced by the presence of wounded plant tissue and by plant phenolic compounds such as acetosyringone. P450-pinF2 may be involved in the detoxification of plant protective agents at the site of wounding. This family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410665 [Multi-domain]  Cd Length: 372  Bit Score: 97.19  E-value: 3.02e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       22 AELRTREPIRKVrtiTGAEAWLVSSYALC-TQVLEDRRFSMKETAAagapRLNALTVPpeVVNNMGNIADAGLRKAVMKA 100
Cdd:cd11039   7 ARMRSEAPVAYV---PSLRETLVTRRDDIrAVEKDIEVFSSSQPAG----LMNVLMGH--NMMRKDGEAHACERRAIFPT 77
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      101 ITPKAPG--LEQFLRDTANSLLDNLITEGApADLRNDFADPLATALHCKVLGIPQEDGPKLFRsLSIAFMSSADPIPAAK 178
Cdd:cd11039  78 FSPKTVKsyWAALFRAVVQRFLDDIEPGGA-ADLFTELAEPVSARCLKDILGLTETSNAELDR-WSQAMIDGAGNYSGDP 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      179 INWDRDIEYMAGI-----------LENPNITTglmgeLSRLRKDPAYSHVSdELFATIGVTFFGaGVISTGSFLTTALIS 247
Cdd:cd11039 156 EVEARCDEATAGIdaaidalipvhRSNPNPSL-----LSVMLNAGMPMSLE-QIRANIKVAIGG-GLNEPRDAIAGTCWG 228
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      248 LIQRPQLRNLLHEKPELIPAGVEELLR----INLSfadglPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGS 323
Cdd:cd11039 229 LLSNPEQLAEVMAGDVHWLRAFEEGLRwispIGMS-----PRRVAEDFEIRGVTLPAGDRVFLMFGSANRDEARFENPDR 303
                       330       340       350       360       370       380       390
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
6UPI_A      324 IELDRPNpTSHLAFGRGQHFCPGSALGRRH-AQIGIEALLKKMPGVDLAVPiDQLVWRTRFqrRIPERLPVLW 395
Cdd:cd11039 304 FDVFRPK-SPHVSFGAGPHFCAGAWASRQMvGEIALPELFRRLPNLIRLDP-EARIGGWAF--RGPINLPVRW 372
AknT-like cd11036
AknT-like proteins; This family is composed of proteins similar to Streptomyces biosynthesis ...
41-388 6.23e-22

AknT-like proteins; This family is composed of proteins similar to Streptomyces biosynthesis proteins including anthracycline biosynthesis proteins DnrQ and AknT, and macrolide antibiotic biosynthesis proteins TylM3 and DesVIII. Streptomyces peucetius DnrQ is involved in the biosynthesis of carminomycin and daunorubicin (daunomycin) while Streptomyces galilaeus AknT functions in the biosynthesis of aclacinomycin A. Streptomyces fradiae TylM3 is involved in the biosynthesis of tylosin derived from the polyketide lactone tylactone, and Streptomyces venezuelae functions in the biosynthesis of methymycin, neomethymycin, narbomycin, and pikromycin. These proteins are required for the glycosylation of specific substrates during the biosynthesis of specific anthracyclines and macrolide antibiotics. Although members of this family belong to the large cytochrome P450 (P450, CYP) superfamily and show significant similarity to cytochrome P450s, they lack heme-binding sites and are not functional cytochromes.


Pssm-ID: 410662 [Multi-domain]  Cd Length: 340  Bit Score: 95.63  E-value: 6.23e-22
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       41 AWLVSSYALCTQVLEDRRFsmkETAAAGAPRLNALTVPPEVVNNMGNIADAGLRKAVMKAITPKAPGLEQFLRDTAnSLL 120
Cdd:cd11036  13 LWVTSDAAAADAVLADPAL---RVRPAAGPVPPAAGLPFGRLVRMTDGPDHSALRPAAAPALGGADVRPLAERARA-RAL 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      121 DNLiteGAPADLRNDFADPLATALHCKVLGIPQEDGPKLFRSLSIAFMSSADPIPAAKinwdrdieyMAGILENPNITTG 200
Cdd:cd11036  89 DAA---PPGFDLVADFLRPLPVRVAAALLGLPADDRARFARLFAALAPALDSLLCARA---------LLAARALLRAALA 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      201 LMGELSRLRKDPAYSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPELIPAGVEELLRINlSFA 280
Cdd:cd11036 157 ELLALTRSAAADALALSAPGDLVANAILLAVQGAEAAAGLVGNAVLALLRRPAQWARLRPDPELAAAAVAETLRYD-PPV 235
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      281 DGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPNPTSHLaFGRGQHFCPGSALGRRHAQIGIEA 360
Cdd:cd11036 236 RLERRFAAEDLELAGVTLPAGDHVVVLLAAANRDPEAFPDPDRFDLGRPTARSAH-FGLGRHACLGAALARAAAAAALRA 314
                       330       340
                ....*....|....*....|....*...
6UPI_A      361 LLKKMPGVDLAVPidqlvWRTRFQRRIP 388
Cdd:cd11036 315 LAARFPGLRAAGP-----VVRRLNARIP 337
CYP_XplA cd20619
cytochrome P450 XplA; XplA is a cytochrome P450 that was found to mediate the microbial ...
93-371 1.20e-17

cytochrome P450 XplA; XplA is a cytochrome P450 that was found to mediate the microbial metabolism of the military explosive, hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX). XplA has an unusual structural organization comprising a heme domain that is fused to its flavodoxin redox partner. XplA, along with its partner reductase XplB, are plasmid encoded and the xplA gene has now been found in divergent genera across the globe with near sequence identity. It has only been detected at explosive-contaminated sites, suggesting rapid dissemination of this novel catabolic activity, possibly within a 50-year period since the introduction of RDX into the environment. XplA belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410712 [Multi-domain]  Cd Length: 358  Bit Score: 83.63  E-value: 1.20e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       93 LRKAVMKAITPKApgLEQFLrDTANSLLDNLI---TEGAPADLRNDFADPLATALHCKVLGIPQEDGPKLFRSL-----S 164
Cdd:cd20619  58 LRRQTNKWFTPKL--VDGWV-RTTRELVGDLLdgvEAGQVIEARRDLAVVPTHVTMARVLQLPEDDADAVMEAMfeamlM 134
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      165 IAFMSSADPIPAAKINWD----RDIEYMAGILENPNIttGLMGELSRLRKDpaySHVSDELFATIGVTFFGAGVISTGSF 240
Cdd:cd20619 135 QSAEPADGDVDRAAVAFGylsaRVAEMLEDKRVNPGD--GLADSLLDAARA---GEITESEAIATILVFYAVGHMAIGYL 209
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      241 LTTALISLIQRPQLRNLLHEKPELIPAGVEELLRINLSfADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPN 320
Cdd:cd20619 210 IASGIELFARRPEVFTAFRNDESARAAIINEMVRMDPP-QLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDD 288
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|..
6UPI_A      321 PGSIELDRPNPTS-HLAFGRGQHFCPGSALGRRHAQIGIEALLKKMPGVDLA 371
Cdd:cd20619 289 PDVFDHTRPPAASrNLSFGLGPHSCAGQIISRAEATTVFAVLAERYERIELA 340
CYP_LDS-like_C cd20612
C-terminal cytochrome P450 domain of linoleate diol synthase and similar cytochrome P450s; ...
42-363 1.12e-14

C-terminal cytochrome P450 domain of linoleate diol synthase and similar cytochrome P450s; This family contains Gaeumannomyces graminis linoleate diol synthase (LDS) and similar proteins including Ssp1 from the phytopathogenic basidiomycete Ustilago maydis. LDS, also called linoleate (8R)-dioxygenase, catalyzes the dioxygenation of linoleic acid to (8R)-hydroperoxylinoleate and the isomerization of the resulting hydroperoxide to (7S,8S)-dihydroxylinoleate. Ssp1 is expressed in mature teliospores, which are produced by U. maydis only after infection of its host plant, maize. Ssp1 is localized on lipid bodies in germinating teliospores, suggesting a role in the mobilization of storage lipids. LDS and Ssp1 contain an N-terminal dioxygenase domain related to animal heme peroxidases, and a C-terminal cytochrome P450 domain. The LDS-like subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410705 [Multi-domain]  Cd Length: 370  Bit Score: 74.68  E-value: 1.12e-14
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       42 WLVSSYALCTQVLEDRR-FSmketaAAGAPRLNALTVPPEVVNNMGNIADAGLRKAVMKAI---TPKAPGLEQFLRDTAN 117
Cdd:cd20612  14 VIVTRYADVKKVLEDPEsFS-----VPWGPAMEDLTKGGPFFLLGGDTPANDRQRELMRKAlysPDLAKDVVFFYELQTR 88
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      118 SLLDNLITEGAPA---DLRNDFADPLATALHCKVLGIPQEDGPKLFRSLSIAFMSSADPIPAAKINWDRDIEYMAGILEN 194
Cdd:cd20612  89 ALLVESSRLGGSGgqvDIVRDVANLVPARFCADLFGLPLKTKENPRGGYTEAELYRALAAIFAYIFFDLDPAKSFQLRRA 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      195 PNITTGLMGELSRlrkdpaySHVSDELFATIGVTFFGaGVISTGSFLTTALISLIQRP---------QLRNLLHEKPELI 265
Cdd:cd20612 169 AQAAAARLGALLD-------AAVADEVRDNVLGTAVG-GVPTQSQAFAQILDFYLRRPgaahlaeiqALARENDEADATL 240
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      266 PAGVEELLRINlSFADGLPRLATADIQVGD-----VLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPnPTSHLAFGRG 340
Cdd:cd20612 241 RGYVLEALRLN-PIAPGLYRRATTDTTVADgggrtVSIKAGDRVFVSLASAMRDPRAFPDPERFRLDRP-LESYIHFGHG 318
                       330       340
                ....*....|....*....|...
6UPI_A      341 QHFCpgsaLGRRHAQIGIEALLK 363
Cdd:cd20612 319 PHQC----LGEEIARAALTEMLR 337
p450 pfam00067
Cytochrome P450; Cytochrome P450s are haem-thiolate proteins involved in the oxidative ...
93-369 2.65e-14

Cytochrome P450; Cytochrome P450s are haem-thiolate proteins involved in the oxidative degradation of various compounds. They are particularly well known for their role in the degradation of environmental toxins and mutagens. They can be divided into 4 classes, according to the method by which electrons from NAD(P)H are delivered to the catalytic site. Sequence conservation is relatively low within the family - there are only 3 absolutely conserved residues - but their general topography and structural fold are highly conserved. The conserved core is composed of a coil termed the 'meander', a four-helix bundle, helices J and K, and two sets of beta-sheets. These constitute the haem-binding loop (with an absolutely conserved cysteine that serves as the 5th ligand for the haem iron), the proton-transfer groove and the absolutely conserved EXXR motif in helix K. While prokaryotic P450s are soluble proteins, most eukaryotic P450s are associated with microsomal membranes. their general enzymatic function is to catalyze regiospecific and stereospecific oxidation of non-activated hydrocarbons at physiological temperatures.


Pssm-ID: 395020 [Multi-domain]  Cd Length: 461  Bit Score: 74.24  E-value: 2.65e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A         93 LRKAVMKAIT-PKAPGLEQFLRDTANSLLDNL---ITEGAPADLRNDFADPLATALHCKVLGIPQE--DGP------KLF 160
Cdd:pfam00067  98 LRRFLTPTFTsFGKLSFEPRVEEEARDLVEKLrktAGEPGVIDITDLLFRAALNVICSILFGERFGslEDPkflelvKAV 177
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A        161 RSLSIAFMSSA----DPIPAAKINWDRD-----------IEYMAGILE---------NPNITTGLMGELSRLRKDPAySH 216
Cdd:pfam00067 178 QELSSLLSSPSpqllDLFPILKYFPGPHgrklkrarkkiKDLLDKLIEerretldsaKKSPRDFLDALLLAKEEEDG-SK 256
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A        217 VSD-ELFATIGvTFFGAGVISTGSFLTTALISLIQRPQLRNLLHE------------------KPELIPAGVEELLRINL 277
Cdd:pfam00067 257 LTDeELRATVL-ELFFAGTDTTSSTLSWALYELAKHPEVQEKLREeidevigdkrsptyddlqNMPYLDAVIKETLRLHP 335
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A        278 SFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPNPT--------SHLAFGRGQHFCPGSAL 349
Cdd:pfam00067 336 VVPLLLPREVTKDTVIPGYLIPKGTLVIVNLYALHRDPEVFPNPEEFDPERFLDEngkfrksfAFLPFGAGPRNCLGERL 415
                         330       340
                  ....*....|....*....|....*
6UPI_A        350 GRRHAQIGIEALL-----KKMPGVD 369
Cdd:pfam00067 416 ARMEMKLFLATLLqnfevELPPGTD 440
PLN02302 PLN02302
ent-kaurenoic acid oxidase
192-362 1.23e-11

ent-kaurenoic acid oxidase


Pssm-ID: 215171 [Multi-domain]  Cd Length: 490  Bit Score: 65.89  E-value: 1.23e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       192 LENPNITTGLMGELSRL--RKDPAYSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPELI---- 265
Cdd:PLN02302 256 SRKQNISPRKKDMLDLLldAEDENGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIakkr 335
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       266 PAG------------------VEELLR-INLSFAdgLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIEL 326
Cdd:PLN02302 336 PPGqkgltlkdvrkmeylsqvIDETLRlINISLT--VFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPNPKEFDP 413
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
6UPI_A       327 DR-----PNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALL 362
Cdd:PLN02302 414 SRwdnytPKAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFL 454
CYP5011A1-like cd20621
cytochrome P450 monooxygenase CYP5011A1 and similar cytochrome P450s; This subfamily is ...
227-384 5.45e-10

cytochrome P450 monooxygenase CYP5011A1 and similar cytochrome P450s; This subfamily is composed of CYPs from unicellular ciliates similar to Tetrahymena thermophila CYP5011A1, whose function is still unknown. It belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410714 [Multi-domain]  Cd Length: 427  Bit Score: 60.73  E-value: 5.45e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      227 VTFFGAGVISTGSFLTTALISLIQRPQLRNLLHE------------KPELIP------AGVEELLRINLSfADGL-PRLA 287
Cdd:cd20621 235 ITFFFAGTDTTGHLVGMCLYYLAKYPEIQEKLRQeiksvvgndddiTFEDLQklnylnAFIKEVLRLYNP-APFLfPRVA 313
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      288 TADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR--------PNPTSHLAFGRGQHFCPGSALGRRHAQIGIE 359
Cdd:cd20621 314 TQDHQIGDLKIKKGWIVNVGYIYNHFNPKYFENPDEFNPERwlnqnnieDNPFVFIPFSAGPRNCIGQHLALMEAKIILI 393
                       170       180
                ....*....|....*....|....*.
6UPI_A      360 ALLKKMpgvDLA-VPIDQLVWRTRFQ 384
Cdd:cd20621 394 YILKNF---EIEiIPNPKLKLIFKLL 416
CYP17A1 cd20673
cytochrome P450 family 17, subfamily A, polypeptide 1; Cytochrome P450 17A1 (CYP17A1 or ...
219-376 1.65e-09

cytochrome P450 family 17, subfamily A, polypeptide 1; Cytochrome P450 17A1 (CYP17A1 or Cyp17a1), also called cytochrome P450c17, steroid 17-alpha-hydroxylase (EC 1.14.14.19)/17,20 lyase (EC 1.14.14.32), or 17-alpha-hydroxyprogesterone aldolase, catalyzes the conversion of pregnenolone and progesterone to their 17-alpha-hydroxylated products and subsequently to dehydroepiandrosterone (DHEA) and androstenedione. It is a dual enzyme that catalyzes both the 17-alpha-hydroxylation and the 17,20-lyase reactions. Severe mutations on the enzyme cause combined 17-hydroxylase/17,20-lyase deficiency (17OHD); patients with 17OHD synthesize 11-deoxycorticosterone (DOC) which causes hypertension and hypokalemia. Loss of 17,20-lyase activity precludes sex steroid synthesis and leads to sexual infantilism. Included in this group is a second 17A P450 from teleost fish, CYP17A2, that is more efficient in pregnenolone 17-alpha-hydroxylation than CYP17A1, but does not catalyze the lyase reaction. CYP17A1 belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410766 [Multi-domain]  Cd Length: 432  Bit Score: 59.26  E-value: 1.65e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      219 DELFATIGvTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEK----------PEL--------IPAGVEELLRINLSFA 280
Cdd:cd20673 231 DHILMTVG-DIFGAGVETTTTVLKWIIAFLLHNPEVQKKIQEEidqnigfsrtPTLsdrnhlplLEATIREVLRIRPVAP 309
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      281 DGLPRLATADIQVGDVLVRKGELVLVLL--------EGAN---FDPEHFPNPGSIELDRPNPtSHLAFGRGQHFCPGSAL 349
Cdd:cd20673 310 LLIPHVALQDSSIGEFTIPKGTRVVINLwalhhdekEWDQpdqFMPERFLDPTGSQLISPSL-SYLPFGAGPRVCLGEAL 388
                       170       180
                ....*....|....*....|....*..
6UPI_A      350 GRRHAQIGIEALLKKMpgvDLAVPIDQ 376
Cdd:cd20673 389 ARQELFLFMAWLLQRF---DLEVPDGG 412
CYP90-like cd11043
plant cytochrome P450s similar to cytochrome P450 family 90, subfamily A, polypeptide 1, ...
269-351 1.72e-09

plant cytochrome P450s similar to cytochrome P450 family 90, subfamily A, polypeptide 1, cytochrome P450 family 90, subfamily B, polypeptide 1, and cytochrome P450 family 90, subfamily D, polypeptide 2; This family is composed of plant cytochrome P450s including: Arabidopsis thaliana cytochrome P450s 85A1 (CYP85A1 or brassinosteroid-6-oxidase 1), 90A1 (CYP90A1), 88A3 (CYP88A3 or ent-kaurenoic acid oxidase 1), 90B1 (CYP90B1 or Dwarf4 or steroid 22-alpha-hydroxylase), and 90C1 (CYP90C1 or 3-epi-6-deoxocathasterone 23-monooxygenase); Oryza sativa cytochrome P450s 90D2 (CYP90D2 or C6-oxidase), 87A3 (CYP87A3), and 724B1 (CYP724B1 or dwarf protein 11); and Taxus cuspidata cytochrome P450 725A2 (CYP725A2 or taxane 13-alpha-hydroxylase). These enzymes are monooxygenases that catalyze oxidation reactions involved in steroid or hormone biosynthesis. CYP85A1, CYP90D2, and CYP90C1 are involved in brassinosteroids biosynthesis, while CYP88A3 catalyzes three successive oxidations of ent-kaurenoic acid, which is a key step in the synthesis of gibberellins. This family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410669 [Multi-domain]  Cd Length: 408  Bit Score: 59.12  E-value: 1.72e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      269 VEELLRInLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSI------ELDRPNPTSHLAFGRGQH 342
Cdd:cd11043 279 INETLRL-APIVPGVFRKALQDVEYKGYTIPKGWKVLWSARATHLDPEYFPDPLKFnpwrweGKGKGVPYTFLPFGGGPR 357

                ....*....
6UPI_A      343 FCPGSALGR 351
Cdd:cd11043 358 LCPGAELAK 366
CYP_PhacA-like cd11066
fungal cytochrome P450s similar to Aspergillus nidulans phenylacetate 2-hydroxylase; This ...
260-352 3.95e-09

fungal cytochrome P450s similar to Aspergillus nidulans phenylacetate 2-hydroxylase; This group includes Aspergillus nidulans phenylacetate 2-hydroxylase (encoded by the phacA gene) and similar fungal cytochrome P450s. PhacA catalyzes the ortho-hydroxylation of phenylacetate, the first step of A. nidulans phenylacetate catabolism. The PhacA-like subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410689 [Multi-domain]  Cd Length: 434  Bit Score: 58.09  E-value: 3.95e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      260 EKPELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSI--------ELDRPNP 331
Cdd:cd11066 289 EKCPYVVALVKETLRYFTVLPLGLPRKTTKDIVYNGAVIPAGTILFMNAWAANHDPEHFGDPDEFiperwldaSGDLIPG 368
                        90       100
                ....*....|....*....|.
6UPI_A      332 TSHLAFGRGQHFCPGSALGRR 352
Cdd:cd11066 369 PPHFSFGAGSRMCAGSHLANR 389
CYP1_2-like cd20617
cytochrome P450 families 1 and 2, and similar cytochrome P450s; This model includes cytochrome ...
201-351 5.40e-09

cytochrome P450 families 1 and 2, and similar cytochrome P450s; This model includes cytochrome P450 families 1 (CYP1) and 2 (CYP2), CYP17A1, and CYP21 in vertebrates, as well as insect and crustacean CYPs similar to CYP15A1 and CYP306A1. CYP1 and CYP2 enzymes are involved in the metabolism of endogenous and exogenous compounds such as hormones, xenobiotics, and drugs. CYP17A1 catalyzes the conversion of pregnenolone and progesterone to their 17-alpha-hydroxylated products, while CYP21 catalyzes the 21-hydroxylation of steroids such as progesterone and 17-alpha-hydroxyprogesterone (17-alpha-OH-progesterone) to form 11-deoxycorticosterone and 11-deoxycortisol, respectively. Members of this group belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410710 [Multi-domain]  Cd Length: 419  Bit Score: 57.61  E-value: 5.40e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      201 LMGELSRLRKDPAYSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEkpELIPAG------------ 268
Cdd:cd20617 203 IDDELLLLLKEGDSGLFDDDSIISTCLDLFLAGTDTTSTTLEWFLLYLANNPEIQEKIYE--EIDNVVgndrrvtlsdrs 280
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      269 --------VEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR-------PNPTS 333
Cdd:cd20617 281 klpylnavIKEVLRLRPILPLGLPRVTTEDTEIGGYFIPKGTQIIINIYSLHRDEKYFEDPEEFNPERflendgnKLSEQ 360
                       170
                ....*....|....*...
6UPI_A      334 HLAFGRGQHFCPGSALGR 351
Cdd:cd20617 361 FIPFGIGKRNCVGENLAR 378
CYP15A1-like cd20651
cytochrome P450 family 15, subfamily A, polypeptide 1, and similar cytochrome P450s; This ...
207-351 1.02e-08

cytochrome P450 family 15, subfamily A, polypeptide 1, and similar cytochrome P450s; This subfamily is composed of insect and crustacean cytochrome P450s including Diploptera punctata cytochrome P450 15A1 (CYP15A1 or CYP15A1), Panulirus argus CYP2L1, and CYP303A1, CYP304A1, and CYP305A1 from Drosophila melanogaster. CYP15A1, also called methyl farnesoate epoxidase, catalyzes the conversion of methyl farnesoate to juvenile hormone III acid during juvenile hormone biosynthesis. CYP303A1, CYP304A1, and CYP305A1 may be involved in the metabolism of insect hormones and in the breakdown of synthetic insecticides. The CYP15A1-like subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410744 [Multi-domain]  Cd Length: 423  Bit Score: 56.84  E-value: 1.02e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      207 RLRKDPAYSHVSDELFATIgVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEK----------PEL-----IP---AG 268
Cdd:cd20651 212 KKKEPPSSSFTDDQLVMIC-LDLFIAGSETTSNTLGFAFLYLLLNPEVQRKVQEEidevvgrdrlPTLddrskLPyteAV 290
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      269 VEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIeldRP-----------NPTSHLAF 337
Cdd:cd20651 291 ILEVLRIFTLVPIGIPHRALKDTTLGGYRIPKDTTILASLYSVHMDPEYWGDPEEF---RPerfldedgkllKDEWFLPF 367
                       170
                ....*....|....
6UPI_A      338 GRGQHFCPGSALGR 351
Cdd:cd20651 368 GAGKRRCLGESLAR 381
PLN02196 PLN02196
abscisic acid 8'-hydroxylase
91-364 2.09e-08

abscisic acid 8'-hydroxylase


Pssm-ID: 177847 [Multi-domain]  Cd Length: 463  Bit Score: 55.71  E-value: 2.09e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A        91 AGLRKAVMKAITPKA-----PGLEQFLRDTANSLLDNLItegapadlrNDFADPLATALHCKVLGI-------PQEDGPK 158
Cdd:PLN02196 127 AKLRKLVLRAFMPDAirnmvPDIESIAQESLNSWEGTQI---------NTYQEMKTYTFNVALLSIfgkdevlYREDLKR 197
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       159 LFRSLSIAFMSSADPIPAAKINWDRDI-----EYMAGIL----ENPNITTGLMGELSRLRKDPAYSHVSDELfatIGVTF 229
Cdd:PLN02196 198 CYYILEKGYNSMPINLPGTLFHKSMKArkelaQILAKILskrrQNGSSHNDLLGSFMGDKEGLTDEQIADNI---IGVIF 274
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       230 fgAGVISTGSFLTTALISLIQRPQLRNLLHEKPELIPAG---------------------VEELLRIN--LSFADglpRL 286
Cdd:PLN02196 275 --AARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDkeegesltwedtkkmpltsrvIQETLRVAsiLSFTF---RE 349
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       287 ATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR----PNPTSHLAFGRGQHFCPGSALGRRHAQIGIEALL 362
Cdd:PLN02196 350 AVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKFDPSRfevaPKPNTFMPFGNGTHSCPGNELAKLEISVLIHHLT 429

                 ..
6UPI_A       363 KK 364
Cdd:PLN02196 430 TK 431
CYP_unk cd11083
unknown subfamily of cytochrome P450s; This subfamily is composed of uncharacterized ...
201-363 2.43e-08

unknown subfamily of cytochrome P450s; This subfamily is composed of uncharacterized cytochrome P450s. Cytochrome P450 (P450, CYP) is a large superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop. Their monooxygenase activity relies on the reductive scission of molecular oxygen bound to the P450 heme iron, and the delivery of two electrons to the heme iron during the catalytic cycle.


Pssm-ID: 410704 [Multi-domain]  Cd Length: 421  Bit Score: 55.41  E-value: 2.43e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      201 LMGELSRLRKDPAYSHVSDELFATIgVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHE-------------------K 261
Cdd:cd11083 203 TLLAMMLAEDDPDARLTDDEIYANV-LTLLLAGEDTTANTLAWMLYYLASRPDVQARVREevdavlggarvppllealdR 281
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      262 PELIPAGVEELLRINlSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR----------PNP 331
Cdd:cd11083 282 LPYLEAVARETLRLK-PVAPLLFLEPNEDTVVGDIALPAGTPVFLLTRAAGLDAEHFPDPEEFDPERwldgaraaepHDP 360
                       170       180       190
                ....*....|....*....|....*....|..
6UPI_A      332 TSHLAFGRGQHFCPGSALGRRHAQIGIEALLK 363
Cdd:cd11083 361 SSLLPFGAGPRLCPGRSLALMEMKLVFAMLCR 392
CYP1 cd11028
cytochrome P450 family 1; The cytochrome P450 family 1 (CYP1 or Cyp1) is composed of three ...
230-351 1.10e-07

cytochrome P450 family 1; The cytochrome P450 family 1 (CYP1 or Cyp1) is composed of three functional human members: CYP1A1, CYP1A2 and CYP1B1, which are regulated by the aryl hydrocarbon receptor (AhR), ligand-activated transcriptional factor that dimerizes with AhR nuclear translocator (ARNT). CYP1 enzymes are involved in the metabolism of endogenous hormones, xenobiotics, and drugs. Included in the CYP1 family is CYP1D1 (cytochrome P450 family 1, subfamily D, polypeptide 1), which is not expressed in humans as its gene is pseudogenized due to five nonsense mutations in the putative coding region, but is functional in in other organisms including cynomolgus monkey. Zebrafish CYP1D1 expression is not regulated by AhR. The CYP1 family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410654 [Multi-domain]  Cd Length: 430  Bit Score: 53.46  E-value: 1.10e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      230 FGAGVISTGSFLTTALISLIQRPQLRNLLHEK----------PEL-----IP---AGVEELLRIN--LSFAdgLPRLATA 289
Cdd:cd11028 240 FGAGFDTISTTLQWSLLYMIRYPEIQEKVQAEldrvigrerlPRLsdrpnLPyteAFILETMRHSsfVPFT--IPHATTR 317
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
6UPI_A      290 DIQVGDVLVRKGELVLVLLEGANFDPEHFPNP----------GSIELDRPNPTSHLAFGRGQHFCPGSALGR 351
Cdd:cd11028 318 DTTLNGYFIPKGTVVFVNLWSVNHDEKLWPDPsvfrperfldDNGLLDKTKVDKFLPFGAGRRRCLGEELAR 389
CYP64-like cd11065
cytochrome P450 family 64-like fungal cytochrome P450s; This group includes Aspergillus flavus ...
180-386 1.82e-07

cytochrome P450 family 64-like fungal cytochrome P450s; This group includes Aspergillus flavus cytochrome P450 64 (CYP64), also called O-methylsterigmatocystin (OMST) oxidoreductase or aflatoxin B synthase or aflatoxin biosynthesis protein Q, and similar fungal cytochrome P450s. CYP64 converts OMST to aflatoxin B1 and converts dihydro-O-methylsterigmatocystin (DHOMST) to aflatoxin B2 in the aflatoxin biosynthesis pathway. The CYP64-like subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410688 [Multi-domain]  Cd Length: 425  Bit Score: 52.96  E-value: 1.82e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      180 NWDRDIEYMAGILENPNITTGLmgelsrLRKDPAYSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRP--QLRnl 257
Cdd:cd11065 188 PFEAAKERMASGTATPSFVKDL------LEELDKEGGLSEEEIKYLAGSLYEAGSDTTASTLQTFILAMALHPevQKK-- 259
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      258 LHE----------------KPEL--IPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP 319
Cdd:cd11065 260 AQEeldrvvgpdrlptfedRPNLpyVNAIVKEVLRWRPVAPLGIPHALTEDDEYEGYFIPKGTTVIPNAWAIHHDPEVYP 339
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      320 NPgsiE-------LDRPNPT------SHLAFGRGQHFCPGSALGRRHAQIGIEALL-----KKMPGVDLAVPIDQLVWRT 381
Cdd:cd11065 340 DP---EefdperyLDDPKGTpdppdpPHFAFGFGRRICPGRHLAENSLFIAIARLLwafdiKKPKDEGGKEIPDEPEFTD 416

                ....*
6UPI_A      382 RFQRR 386
Cdd:cd11065 417 GLVSH 421
CYP17A1-like cd11027
cytochrome P450 family 17, subfamily A, polypeptide 1, and similar cytochrome P450s; This ...
219-351 5.92e-07

cytochrome P450 family 17, subfamily A, polypeptide 1, and similar cytochrome P450s; This subfamily contains cytochrome P450 17A1 (CYP17A1 or Cyp17a1), cytochrome P450 21 (CYP21 or Cyp21) and similar proteins. CYP17A1, also called cytochrome P450c17, steroid 17-alpha-hydroxylase (EC 1.14.14.19)/17,20 lyase (EC 1.14.14.32), or 17-alpha-hydroxyprogesterone aldolase, catalyzes the conversion of pregnenolone and progesterone to their 17-alpha-hydroxylated products and subsequently to dehydroepiandrosterone (DHEA) and androstenedione; it catalyzes both the 17-alpha-hydroxylation and the 17,20-lyase reaction. This subfamily also contains CYP21, also called steroid 21-hydroxylase (EC 1.14.14.16) or cytochrome P-450c21 or CYP21A2, catalyzes the 21-hydroxylation of steroids and is required for the adrenal synthesis of mineralocorticoids and glucocorticoids. The CYP17A1-like subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410653 [Multi-domain]  Cd Length: 428  Bit Score: 51.06  E-value: 5.92e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      219 DELFATIGvTFFGAGVISTGSFLTTALISLIQRPQLRNLLHE----------KPEL--------IPAGVEELLRINlSFA 280
Cdd:cd11027 228 DHLVMTIS-DIFGAGTETTATTLRWAIAYLVNYPEVQAKLHAelddvigrdrLPTLsdrkrlpyLEATIAEVLRLS-SVV 305
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      281 D-GLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR---------PNPTSHLAFGRGQHFCPGSALG 350
Cdd:cd11027 306 PlALPHKTTCDTTLRGYTIPKGTTVLVNLWALHHDPKEWDDPDEFRPERfldengklvPKPESFLPFSAGRRVCLGESLA 385

                .
6UPI_A      351 R 351
Cdd:cd11027 386 K 386
CYPBJ-4-like cd20614
cytochrome P450 BJ-4 homolog and similar cytochrome P450s; This group is composed of mostly ...
199-346 6.36e-07

cytochrome P450 BJ-4 homolog and similar cytochrome P450s; This group is composed of mostly uncharacterized proteins including Sinorhizobium fredii CYPBJ-4 homolog. It belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410707 [Multi-domain]  Cd Length: 406  Bit Score: 50.90  E-value: 6.36e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      199 TGLMGELSRLRKDPAYSHVSDELFATIGVTFFgAGVISTGSFLTTALISLIQRPQLRNLL---HEKPELIPAGVEELLRi 275
Cdd:cd20614 187 TGLVAALIRARDDNGAGLSEQELVDNLRLLVL-AGHETTASIMAWMVIMLAEHPAVWDALcdeAAAAGDVPRTPAELRR- 264
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      276 nLSFADGL--------------PRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR-------PNPTSH 334
Cdd:cd20614 265 -FPLAEALfretlrlhppvpfvFRRVLEEIELGGRRIPAGTHLGIPLLLFSRDPELYPDPDRFRPERwlgrdraPNPVEL 343
                       170
                ....*....|..
6UPI_A      335 LAFGRGQHFCPG 346
Cdd:cd20614 344 LQFGGGPHFCLG 355
CYP170A1-like cd11049
cytochrome P450 family 170, subfamily A, polypeptide 1-like actinobacterial cytochrome P450s; ...
227-356 3.19e-06

cytochrome P450 family 170, subfamily A, polypeptide 1-like actinobacterial cytochrome P450s; This subfamily is composed of Streptomyces coelicolor cytochrome P450 170A1 (CYP170A1), Streptomyces avermitilis pentalenene oxygenase, and similar actinobacterial cytochrome P450s. CYP170A1, also called epi-isozizaene 5-monooxygenase (EC 1.14.13.106)/(E)-beta-farnesene synthase (EC 4.2.3.47), catalyzes the two-step allylic oxidation of epi-isozizaene to albaflavenone, which is a sesquiterpenoid antibiotic. Pentalenene oxygenase (EC 1.14.15.32) catalyzes the conversion of pentalenene to pentalen-13-al by stepwise oxidation via pentalen-13-ol, a precursor of the neopentalenolactone antibiotic. The CYP170A1-like subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410673 [Multi-domain]  Cd Length: 415  Bit Score: 48.79  E-value: 3.19e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      227 VTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPELI----PAGVEELLRinLSFADG--------------LPRLAT 288
Cdd:cd11049 226 ITLLTAGTETTASTLAWAFHLLARHPEVERRLHAELDAVlggrPATFEDLPR--LTYTRRvvtealrlyppvwlLTRRTT 303
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
6UPI_A      289 ADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR--PNPTSH------LAFGRGQHFCPGSALGRRHAQI 356
Cdd:cd11049 304 ADVELGGHRLPAGTEVAFSPYALHRDPEVYPDPERFDPDRwlPGRAAAvprgafIPFGAGARKCIGDTFALTELTL 379
CYP24A1-like cd11054
cytochrome P450 family 24 subfamily A, polypeptide 1 and similar cytochrome P450s; This family ...
206-365 4.36e-06

cytochrome P450 family 24 subfamily A, polypeptide 1 and similar cytochrome P450s; This family is composed of vertebrate cytochrome P450 24A1 (CYP24A1) and similar proteins including several Drosophila proteins such as CYP315A1 (also called protein shadow) and CYP314A1 (also called ecdysone 20-monooxygenase), and vertebrate CYP11 and CYP27 subfamilies. Both CYP314A1 and CYP315A1, which has ecdysteroid C2-hydroxylase activity, are involved in the metabolism of insect hormones. CYP24A1 and CYP27B1 have roles in calcium homeostasis and metabolism, and the regulation of vitamin D. CYP24A1 catabolizes calcitriol (1,25(OH)2D), the physiologically active vitamin D hormone, by catalyzing its hydroxylation, while CYP27B1 is a calcidiol 1-monooxygenase that coverts 25-hydroxyvitamin D3 to calcitriol. The CYP24A1-like family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410677 [Multi-domain]  Cd Length: 426  Bit Score: 48.29  E-value: 4.36e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      206 SRLRKDPAYSHVSDelfatigvtFFGAGVISTGSFLTTALISLIQRP--------QLRNLLHEKPELIPAGVEEL----- 272
Cdd:cd11054 225 PGLSKKEIVTMALD---------LLLAGVDTTSNTLAFLLYHLAKNPevqeklyeEIRSVLPDGEPITAEDLKKMpylka 295
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      273 -----LRINlSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNP----------GSIELDRPNPTSHLAF 337
Cdd:cd11054 296 cikesLRLY-PVAPGNGRILPKDIVLSGYHIPKGTLVVLSNYVMGRDEEYFPDPeefiperwlrDDSENKNIHPFASLPF 374
                       170       180
                ....*....|....*....|....*...
6UPI_A      338 GRGQHFCpgsaLGRRHAQIGIEALLKKM 365
Cdd:cd11054 375 GFGPRMC----IGRRFAELEMYLLLAKL 398
CYP2 cd11026
cytochrome P450 family 2; The cytochrome P450 family 2 (CYP2 or Cyp2) is one of the largest, ...
210-351 1.08e-05

cytochrome P450 family 2; The cytochrome P450 family 2 (CYP2 or Cyp2) is one of the largest, most diverse CYP families in vertebrates. It includes many subfamilies across vertebrate species but not all subfamilies are found in multiple vertebrate taxonomic classes. The CYP2U and CYP2R genes are present in the vertebrate ancestor and are shared across all vertebrate classes, whereas some subfamilies are lineage-specific, such as CYP2B and CYP2S in mammals. CYP2 enzymes play important roles in drug metabolism. The CYP2 family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410652 [Multi-domain]  Cd Length: 425  Bit Score: 47.17  E-value: 1.08e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      210 KDPAYSHVSDE-LFATIGVTFFgAGVISTGSFLTTALISLIQRPQLRNLLHE----------KPEL-----IP---AGVE 270
Cdd:cd11026 215 KDNPNSEFHEEnLVMTVLDLFF-AGTETTSTTLRWALLLLMKYPHIQEKVQEeidrvigrnrTPSLedrakMPytdAVIH 293
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      271 ELLRinlsFAD----GLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIE----LD-----RPNPTsHLAF 337
Cdd:cd11026 294 EVQR----FGDivplGVPHAVTRDTKFRGYTIPKGTTVIPNLTSVLRDPKQWETPEEFNpghfLDeqgkfKKNEA-FMPF 368
                       170
                ....*....|....
6UPI_A      338 GRGQHFCPGSALGR 351
Cdd:cd11026 369 SAGKRVCLGEGLAR 382
CYP58-like cd11062
cytochrome P450 family 58-like fungal cytochrome P450s; This group includes Fusarium ...
157-349 1.26e-05

cytochrome P450 family 58-like fungal cytochrome P450s; This group includes Fusarium sporotrichioides cytochrome P450 58 (CYP58, also known as Tri4 and trichodiene oxygenase), and similar fungal proteins. CYP58 catalyzes the oxygenation of trichodiene during the biosynthesis of trichothecenes, which are sesquiterpenoid toxins that act by inhibiting protein biosynthesis. The CYP58-like subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410685 [Multi-domain]  Cd Length: 425  Bit Score: 46.86  E-value: 1.26e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      157 PKLFRSLSIAFMSSADPIPAAKINWDRDI-----EYMAGILENPNITTGLMGELSRLRKDPAYSHVSDELFATIGVTFFG 231
Cdd:cd11062 155 LKLLRSLPESLLKRLNPGLAVFLDFQESIakqvdEVLRQVSAGDPPSIVTSLFHALLNSDLPPSEKTLERLADEAQTLIG 234
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      232 AGVISTGSFLTTALISLIQRPQLRNLLHEkpELIPAG---------------------VEELLRINLSFADGLPRLA-TA 289
Cdd:cd11062 235 AGTETTARTLSVATFHLLSNPEILERLRE--ELKTAMpdpdsppslaeleklpyltavIKEGLRLSYGVPTRLPRVVpDE 312
                       170       180       190       200       210       220       230
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
6UPI_A      290 DIQVGDVLVRKGELV-----LVllegaNFDPEHFPNP------------GSIELDRpnptsHL-AFGRGQHFCPGSAL 349
Cdd:cd11062 313 GLYYKGWVIPPGTPVsmssyFV-----HHDEEIFPDPhefrperwlgaaEKGKLDR-----YLvPFSKGSRSCLGINL 380
PLN02987 PLN02987
Cytochrome P450, family 90, subfamily A
218-388 2.13e-05

Cytochrome P450, family 90, subfamily A


Pssm-ID: 166628 [Multi-domain]  Cd Length: 472  Bit Score: 46.51  E-value: 2.13e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       218 SDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPELIPAG---------------------VEELLRIn 276
Cdd:PLN02987 264 SDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEKIRAMksdsyslewsdyksmpftqcvVNETLRV- 342
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       277 LSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP-----NPGSIElDRPNPTS----HLAFGRGQHFCPGS 347
Cdd:PLN02987 343 ANIIGGIFRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHEYFKdartfNPWRWQ-SNSGTTVpsnvFTPFGGGPRLCPGY 421
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
6UPI_A       348 ALGRrhaqIGIEALLKKMPGVDLAVPI--DQLVW--RTRFQRRIP 388
Cdd:PLN02987 422 ELAR----VALSVFLHRLVTRFSWVPAeqDKLVFfpTTRTQKRYP 462
CYP503A1-like cd11041
cytochrome P450 family 503, subfamily A, polypeptide 1 and similar cytochrome P450s; This ...
219-346 3.53e-05

cytochrome P450 family 503, subfamily A, polypeptide 1 and similar cytochrome P450s; This family is composed of predominantly fungal cytochrome P450s (CYPs) with similarity to Fusarium fujikuroi Cytochrome P450 503A1 (CYP503A1, also called ent-kaurene oxidase or cytochrome P450-4), Aspergillus nidulans austinol synthesis protein I (ausI), Alternaria alternata tentoxin synthesis protein 1 (TES1), and Acanthamoeba polyphaga mimivirus cytochrome P450 51 (CYP51, also called P450-LIA1 or sterol 14-alpha demethylase). Ent-kaurene oxidase catalyzes three successive oxidations of the 4-methyl group of ent-kaurene to form kaurenoic acid, an intermediate in gibberellin biosynthesis. AusI and TES1 are cytochrome P450 monooxygenases that mediate the biosynthesis of the meroterpenoids, austinol and dehydroaustinol, and the phytotoxin tentoxin, respectively. P450-LIA1 catalyzes the 14-alpha demethylation of obtusifoliol and functions in steroid biosynthesis. This family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410667 [Multi-domain]  Cd Length: 441  Bit Score: 45.75  E-value: 3.53e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      219 DELFATIGVTFFGAgVISTGSFLTTALISLIQRPQL--------RNLLHEKPELIPAGVEEL----------LRIN-LSF 279
Cdd:cd11041 226 YDLADRQLALSFAA-IHTTSMTLTHVLLDLAAHPEYieplreeiRSVLAEHGGWTKAALNKLkkldsfmkesQRLNpLSL 304
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      280 AdGLPRLATADIQVGD-VLVRKGELVLVLLEGANFDPEHFPNPGSIELDR------------------PNPTsHLAFGRG 340
Cdd:cd11041 305 V-SLRRKVLKDVTLSDgLTLPKGTRIAVPAHAIHRDPDIYPDPETFDGFRfyrlreqpgqekkhqfvsTSPD-FLGFGHG 382

                ....*.
6UPI_A      341 QHFCPG 346
Cdd:cd11041 383 RHACPG 388
CYP6-like cd11056
cytochrome P450 family 6 and similar cytochrome P450s; This family is composed of cytochrome ...
217-364 3.60e-05

cytochrome P450 family 6 and similar cytochrome P450s; This family is composed of cytochrome P450s from insects and crustaceans, including the CYP6, CYP9 and CYP310 subfamilies, which are involved in the metabolism of insect hormones and xenobiotic detoxification. The CYP6-like family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410679 [Multi-domain]  Cd Length: 429  Bit Score: 45.61  E-value: 3.60e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      217 VSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHE-------------KPELIP------AGVEELLRIN- 276
Cdd:cd11056 225 LTDEELAAQAFVFFLAGFETSSSTLSFALYELAKNPEIQEKLREeidevlekhggelTYEALQemkyldQVVNETLRKYp 304
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      277 -LSFADglpRLATADIQVG--DVLVRKGELVLVLLEGANFDPEHFPNPgsiELDRP-----------NPTSHLAFGRGQH 342
Cdd:cd11056 305 pLPFLD---RVCTKDYTLPgtDVVIEKGTPVIIPVYALHHDPKYYPEP---EKFDPerfspenkkkrHPYTYLPFGDGPR 378
                       170       180
                ....*....|....*....|..
6UPI_A      343 FCPGSALGRRHAQIGIEALLKK 364
Cdd:cd11056 379 NCIGMRFGLLQVKLGLVHLLSN 400
Cyp2F cd20669
cytochrome P450 family 2, subfamily F; Cytochrome P450 family 2, subfamily F (CYP2F) members ...
204-364 5.19e-05

cytochrome P450 family 2, subfamily F; Cytochrome P450 family 2, subfamily F (CYP2F) members are selectively expressed in lung tissues. They are responsible for the bioactivation of several pneumotoxic and carcinogenic chemicals such as benzene, styrene, naphthalene, and 1,1-dichloroethylene. CYP2F1 and CYP2F3 selectively catalyzes the 3-methyl dehydrogenation of 3-methylindole, forming toxic reactive intermediates that can form adducts with proteins and DNA. The CYP2F subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410762 [Multi-domain]  Cd Length: 425  Bit Score: 45.14  E-value: 5.19e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      204 ELSRLRKDPAySHVSDE-LFATIGVTFFGaGVISTGSFLTTALISLIQRPQLRNLLHEK----------PEL-----IP- 266
Cdd:cd20669 210 KMAEEKQDPL-SHFNMEtLVMTTHNLLFG-GTETVSTTLRYGFLILMKYPKVAARVQEEidrvvgrnrlPTLedrarMPy 287
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      267 --AGVEELLRinlsFAD----GLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPgsielDRPNPTSHL----- 335
Cdd:cd20669 288 tdAVIHEIQR----FADiipmSLPHAVTRDTNFRGFLIPKGTDVIPLLNSVHYDPTQFKDP-----QEFNPEHFLddngs 358
                       170       180       190
                ....*....|....*....|....*....|....*..
6UPI_A      336 --------AFGRGQHFCPGSALGRRHAQIGIEALLKK 364
Cdd:cd20669 359 fkkndafmPFSAGKRICLGESLARMELFLYLTAILQN 395
CYP2D cd20663
cytochrome P450 family 2, subfamily D; Members of CYP2D are present in mammals, birds, ...
196-351 5.46e-05

cytochrome P450 family 2, subfamily D; Members of CYP2D are present in mammals, birds, reptiles, and amphibians. The hominin CYP2D subfamily consists of a functional CYP2D6 and two paralogs, CYP2D7 and CYP2D8, that are often not functional in some species. Human CYP2D6 has a high affinity for alkaloids and can detoxify them. It is also responsible for metabolizing about 25% of commonly used drugs, such as antidepressants, beta-blockers, and antiarrhythmics. The CYP2D subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410756 [Multi-domain]  Cd Length: 428  Bit Score: 45.07  E-value: 5.46e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      196 NITTGLMGELSRLRKDPAySHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHE----------KPEL- 264
Cdd:cd20663 206 DLTDAFLAEMEKAKGNPE-SSFNDENLRLVVADLFSAGMVTTSTTLSWALLLMILHPDVQRRVQQeidevigqvrRPEMa 284
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      265 ----IP---AGVEELLRinlsFAD----GLPRLATADIQVGDVLVRKGELVL-----VLLEGAN------FDPEHFpnpg 322
Cdd:cd20663 285 dqarMPytnAVIHEVQR----FGDivplGVPHMTSRDIEVQGFLIPKGTTLItnlssVLKDETVwekplrFHPEHF---- 356
                       170       180       190
                ....*....|....*....|....*....|...
6UPI_A      323 sieLDRP----NPTSHLAFGRGQHFCPGSALGR 351
Cdd:cd20663 357 ---LDAQghfvKPEAFMPFSAGRRACLGEPLAR 386
CYP61_CYP710 cd11082
C-22 sterol desaturase subfamily, such as fungal cytochrome P450 61 and plant cytochrome P450 ...
284-365 8.33e-05

C-22 sterol desaturase subfamily, such as fungal cytochrome P450 61 and plant cytochrome P450 710; C-22 sterol desaturase (EC 1.14.19.41), also called sterol 22-desaturase, is required for the formation of the C-22 double bond in the sterol side chain of delta22-unsaturated sterols, which are present specifically in fungi and plants. This enzyme is also called cytochrome P450 61 (CYP61) in fungi and cytochrome P450 710 (CYP710) in plants. The CYP61/CYP710 subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410703 [Multi-domain]  Cd Length: 415  Bit Score: 44.55  E-value: 8.33e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      284 PRLATADIQVG-DVLVRKGELVLVLLEGANFDPehFPNPGSIELDRPNPTSH---------LAFGRGQHFCpgsaLGRRH 353
Cdd:cd11082 301 PHIAKKDFPLTeDYTVPKGTIVIPSIYDSCFQG--FPEPDKFDPDRFSPERQedrkykknfLVFGAGPHQC----VGQEY 374
                        90
                ....*....|..
6UPI_A      354 AQIGIEALLKKM 365
Cdd:cd11082 375 AINHLMLFLALF 386
CYP2K cd20664
cytochrome P450 family 2, subfamily K; Members of CYP2K are present in fish, birds, and ...
218-364 1.75e-04

cytochrome P450 family 2, subfamily K; Members of CYP2K are present in fish, birds, and amphibians. CYP2K6 from zebrafish has been shown to catalyze the conversion of aflatoxin B1 (AFB1) to its cytotoxic derivative AFB1 exo-8,9-epoxide, while its ortholog in rainbow trout CYP2K1 is also capable of oxidizing lauric acid. In birds, CYP2K is one of the largest CYP2 subfamilies. The CYP2K subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410757 [Multi-domain]  Cd Length: 424  Bit Score: 43.26  E-value: 1.75e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      218 SDELFATIGvTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPELIPAGVEELL--RINLSFAD-------------- 281
Cdd:cd20664 223 DDNLTCSVG-NLFGAGTDTTGTTLRWGLLLMMKYPEIQKKVQEEIDRVIGSRQPQVehRKNMPYTDaviheiqrfanivp 301
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      282 -GLPRLATADIQVGDVLVRKGELVLVLLEGA-----------NFDPEHFPNPGSIELDRPnptSHLAFGRGQHFCPGSAL 349
Cdd:cd20664 302 mNLPHATTRDVTFRGYFIPKGTYVIPLLTSVlqdktewekpeEFNPEHFLDSQGKFVKRD---AFMPFSAGRRVCIGETL 378
                       170
                ....*....|....*
6UPI_A      350 GRRHAQIGIEALLKK 364
Cdd:cd20664 379 AKMELFLFFTSLLQR 393
CYP27B1 cd20648
cytochrome P450 family 27, subfamily B, polypeptide 1, also called calcidiol 1-monooxygenase; ...
232-356 1.77e-04

cytochrome P450 family 27, subfamily B, polypeptide 1, also called calcidiol 1-monooxygenase; Cytochrome p450 27B1 (CYP27B1) is also called calcidiol 1-monooxygenase (EC 1.14.15.18), 25-hydroxyvitamin D(3) 1-alpha-hydroxylase (VD3 1A hydroxylase), 25-hydroxyvitamin D-1 alpha hydroxylase, 25-OHD-1 alpha-hydroxylase, 25-hydroxycholecalciferol 1-hydroxylase, or 25-hydroxycholecalciferol 1-monooxygenase. It catalyzes the conversion of 25-hydroxyvitamin D3 (25(OH)D3) to 1-alpha,25-dihydroxyvitamin D3 (1,25(OH)2D3 or calcitriol), and of 24,25-dihydroxyvitamin D3 (24,25(OH)(2)D3) to 1-alpha,24,25-trihydroxyvitamin D3 (1alpha,24,25(OH)(3)D3). It is also active with 25-hydroxy-24-oxo-vitamin D3, and has an important role in normal bone growth, calcium metabolism, and tissue differentiation. CYP27B1 belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410741 [Multi-domain]  Cd Length: 430  Bit Score: 43.59  E-value: 1.77e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      232 AGVISTGSFLTTALISLIQRPQLRNLLHE------KPELIP------------AGVEELLRINLSFADGLPRLATADIQV 293
Cdd:cd20648 245 AGVDTISSTLSWSLYELSRHPDVQTALHReitaalKDNSVPsaadvarmpllkAVVKEVLRLYPVIPGNARVIPDRDIQV 324
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      294 GDVLVRKGELVLVLLEGANFDPEHFPNPGSI-------ELDRPNPTSHLAFGRGQHFCpgsaLGRRHAQI 356
Cdd:cd20648 325 GEYIIPKKTLITLCHYATSRDENQFPDPNSFrperwlgKGDTHHPYASLPFGFGKRSC----IGRRIAEL 390
CYP7_CYP8-like cd11040
cytochrome P450s similar to cytochrome P450 family 7, subfamily A, polypeptide 1, cytochrome ...
271-373 1.86e-04

cytochrome P450s similar to cytochrome P450 family 7, subfamily A, polypeptide 1, cytochrome P450 family 7, subfamily B, polypeptide 1, cytochrome P450 family 8, subfamily A, polypeptide 1; This family is composed of cytochrome P450s (CYPs) with similarity to the human P450s CYP7A1, CYP7B1, CYP8B1, CYP39A1 and prostacyclin synthase (CYP8A1). CYP7A1, CYP7B1, CYP8B1, and CYP39A1 are involved in the catabolism of cholesterol to bile acids (BAs) in two major pathways. CYP7A1 (cholesterol 7alpha-hydroxylase) and CYP8B1 (sterol 12-alpha-hydroxylase) function in the classic (or neutral) pathway, which leads to two bile acids: cholic acid (CA) and chenodeoxycholic acid (CDCA). CYP7B1 and CYP39A1 are 7-alpha-hydroxylases involved in the alternative (or acidic) pathway, which leads mainly to the formation of CDCA. Prostacyclin synthase (CYP8A1) catalyzes the isomerization of prostaglandin H2 to prostacyclin (or prostaglandin I2), a potent mediator of vasodilation and anti-platelet aggregation. This family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410666 [Multi-domain]  Cd Length: 432  Bit Score: 43.51  E-value: 1.86e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      271 ELLRINLSFAdgLPRLATADI-QVGDVLVRKGELVLVLLEGANFDPEHFPNP------------GSIELDRPNPTSHLAF 337
Cdd:cd11040 296 ETLRLHSSST--SVRLVTEDTvLGGGYLLRKGSLVMIPPRLLHMDPEIWGPDpeefdperflkkDGDKKGRGLPGAFRPF 373
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*...
6UPI_A      338 GRGQHFCPGSALGRRHAQIGIEALL------------KKMPGVDLAVP 373
Cdd:cd11040 374 GGGASLCPGRHFAKNEILAFVALLLsrfdvepvgggdWKVPGMDESPG 421
CYP78 cd11076
cytochrome P450 family 78; Characterized cytochrome P450 family 78 (CYP78 or Cyp78) proteins ...
265-350 2.73e-04

cytochrome P450 family 78; Characterized cytochrome P450 family 78 (CYP78 or Cyp78) proteins include: CYP78A5, which is expressed in leaf, flora and embryo, and has been reported to stimulate plant organ growth in Arabidopsis thaliana and to regulate plant architecture, ripening time, and fruit mass in tomato; Glycine max CYP78A10 that functions in regulating seed size/weight and pod number; and Physcomitrella patens CYP78A27 or CYP78A28, which together, are essential in bud formation. The CYP78 family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410699 [Multi-domain]  Cd Length: 426  Bit Score: 42.70  E-value: 2.73e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      265 IPAGVEELLRIN-----LSFAdglpRLATADIQVGDVLVRKGELVLVLL-----------EGANFDPEHF-PNPGSIELD 327
Cdd:cd11076 286 LQAVVKETLRLHppgplLSWA----RLAIHDVTVGGHVVPAGTTAMVNMwaithdphvweDPLEFKPERFvAAEGGADVS 361
                        90       100
                ....*....|....*....|....
6UPI_A      328 RPNPTSHLA-FGRGQHFCPGSALG 350
Cdd:cd11076 362 VLGSDLRLApFGAGRRVCPGKALG 385
CYP110-like cd11053
cytochrome P450 family 110 and similar cytochrome P450s; This group is composed of mostly ...
219-349 4.70e-04

cytochrome P450 family 110 and similar cytochrome P450s; This group is composed of mostly uncharacterized proteins, including Nostoc sp. probable cytochrome P450 110 (CYP110) and putative cytochrome P450s 139 (CYP139), 138 (CYP138), and 135B1 (CYP135B1) from Mycobacterium bovis. CYP110 genes, unique to cyanobacteria, are widely distributed in heterocyst-forming cyanobacteria including nitrogen-fixing genera Nostoc and Anabaena. This family belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410676 [Multi-domain]  Cd Length: 415  Bit Score: 42.19  E-value: 4.70e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      219 DELfatigVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHE---------KPELIP------AGVEELLRINlSFADGL 283
Cdd:cd11053 226 DEL-----MTLLFAGHETTATALAWAFYWLHRHPEVLARLLAeldalggdpDPEDIAklpyldAVIKETLRLY-PVAPLV 299
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
6UPI_A      284 PRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR-----PNPTSHLAFGRGQHFCPGSAL 349
Cdd:cd11053 300 PRRVKEPVELGGYTLPAGTTVAPSIYLTHHRPDLYPDPERFRPERflgrkPSPYEYLPFGGGVRRCIGAAF 370
CYP2A cd20668
cytochrome P450 family 2, subfamily A; Cytochrome P450 family 2, subfamily A (CYP2A) includes ...
216-351 5.67e-04

cytochrome P450 family 2, subfamily A; Cytochrome P450 family 2, subfamily A (CYP2A) includes CYP2A1, 2A2, and 2A3 in rats; CYP2A4, 2A5, 2A12, 2A20p, 2A21p, 2A22, and 2A23p in mice; CYP2A6, 2A7, 2A13, 2A18P in humans; CYP2A8, 2A9, 2A14, 2A15, 2A16, and 2A17 in hamsters; CYP2A10 and 2A11 in rabbits; and CYP2A19 in pigs. CYP2A enzymes metabolize numerous xenobiotic compounds, including coumarin, aflatoxin B1, nicotine, cotinine, 1,3-butadiene, and acetaminophen, among others, as well as endogenous compounds, including testosterone, progesterone, and other steroid hormones. Human CYP2A6 is responsible for the systemic clearance of nicotine, while CYP2A13 activates the nicotine-derived procarcinogen 4-(methylnitrosamino)-1-(3-pyridyl)-1-butanone (NNK) into DNA-altering compounds that cause lung cancer. The CYP2A subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410761 [Multi-domain]  Cd Length: 425  Bit Score: 41.71  E-value: 5.67e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      216 HVSDELFATIGVTFFGAGVISTGsfLTTALISLIQRPQLRNLLHEKPE---------------LIP---AGVEELLRinl 277
Cdd:cd20668 223 YMKNLVMTTLNLFFAGTETVSTT--LRYGFLLLMKHPEVEAKVHEEIDrvigrnrqpkfedraKMPyteAVIHEIQR--- 297
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      278 sFAD----GLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIE----LD-----RPNPtSHLAFGRGQHFC 344
Cdd:cd20668 298 -FGDvipmGLARRVTKDTKFRDFFLPKGTEVFPMLGSVLKDPKFFSNPKDFNpqhfLDdkgqfKKSD-AFVPFSIGKRYC 375

                ....*..
6UPI_A      345 PGSALGR 351
Cdd:cd20668 376 FGEGLAR 382
CYP132-like cd20620
cytochrome P450 family 132 and similar cytochrome P450s; This subfamily is composed of ...
219-350 1.30e-03

cytochrome P450 family 132 and similar cytochrome P450s; This subfamily is composed of Mycobacterium tuberculosis cytochrome P450 132 (CYP132) and similar proteins. The function of CYP132 is as yet unknown. CYP132 belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410713 [Multi-domain]  Cd Length: 406  Bit Score: 40.64  E-value: 1.30e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      219 DELfatigVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEK---------------PEL--IPAGVEELLRInLSFAD 281
Cdd:cd20620 215 DEV-----MTLFLAGHETTANALSWTWYLLAQHPEVAARLRAEvdrvlggrpptaedlPQLpyTEMVLQESLRL-YPPAW 288
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
6UPI_A      282 GLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR--PNPT------SHLAFGRGQHFCPGSALG 350
Cdd:cd20620 289 IIGREAVEDDEIGGYRIPAGSTVLISPYVTHRDPRFWPDPEAFDPERftPEREaarpryAYFPFGGGPRICIGNHFA 365
CYP_FUM15-like cd11069
Fusarium verticillioides cytochrome P450 monooxygenase FUM15, and similar cytochrome P450s; ...
219-391 1.80e-03

Fusarium verticillioides cytochrome P450 monooxygenase FUM15, and similar cytochrome P450s; Fusarium verticillioides cytochrome P450 monooxygenase FUM15, is also called fumonisin biosynthesis cluster protein 15. The FUM15 gene is part of the gene cluster that mediates the biosynthesis of fumonisins B1, B2, B3, and B4, which are carcinogenic mycotoxins. This FUM15-like subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410692 [Multi-domain]  Cd Length: 437  Bit Score: 40.33  E-value: 1.80e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      219 DELFATIgVTFFGAGVISTGSFLTTALISLIQRPQ--------LRNLLHEKPELIPAG------------VEELLRInLS 278
Cdd:cd11069 234 EELIDQI-LTFLAAGHETTSTALTWALYLLAKHPDvqerlreeIRAALPDPPDGDLSYddldrlpylnavCRETLRL-YP 311
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      279 FADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFP------NPGS-IELDRPNPTSH-------LAFGRGQHFC 344
Cdd:cd11069 312 PVPLTSREATKDTVIKGVPIPKGTVVLIPPAAINRSPEIWGpdaeefNPERwLEPDGAASPGGagsnyalLTFLHGPRSC 391
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*
6UPI_A      345 PGSALgrrhAQIGIEALLKKM-------PGVDlavpiDQLVWRTR-FQRRIPERL 391
Cdd:cd11069 392 IGKKF----ALAEMKVLLAALvsrfefeLDPD-----AEVERPIGiITRPPVDGL 437
CYP2C-like cd20665
cytochrome P450 family 2, subfamily C, and similar cytochrome P450s; This CYP2C-like group ...
219-352 2.08e-03

cytochrome P450 family 2, subfamily C, and similar cytochrome P450s; This CYP2C-like group includes CYP2C, and similar CYPs including mammalian CYP2E1, also called 4-nitrophenol 2-hydroxylase, as well as chicken CYP2H1 and CYP2H2. The CYP2C subfamily is composed of four human members (CYP2C8, CYP2C9, CYP2C18, CYP2C19) that metabolize approximately 20% of clinically used drugs, and all four exhibit genetic polymorphisms that results in toxicity or altered efficacy of some drugs in affected individuals. CYP2E1 participates in the metabolism of endogenous substrates, including acetone and fatty acids, and exogenous compounds such as anesthetics, ethanol, nicotine, acetaminophen, aspartame, and chlorzoxazone, among others. The CYP2C-like subfamily belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410758 [Multi-domain]  Cd Length: 425  Bit Score: 39.94  E-value: 2.08e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      219 DELFATIGvTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKPELI---------------P---AGVEELLR-INLsF 279
Cdd:cd20665 225 ENLAVTVT-DLFGAGTETTSTTLRYGLLLLLKHPEVTAKVQEEIDRVigrhrspcmqdrshmPytdAVIHEIQRyIDL-V 302
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
6UPI_A      280 ADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPgsielDRPNPTSHL----AFGRGQHFCPGSAlGRR 352
Cdd:cd20665 303 PNNLPHAVTCDTKFRNYLIPKGTTVITSLTSVLHDDKEFPNP-----EKFDPGHFLdengNFKKSDYFMPFSA-GKR 373
CYP11A1 cd20643
cytochrome P450 family 11, subfamily A, polypeptide 1, also called cholesterol side-chain ...
264-365 7.30e-03

cytochrome P450 family 11, subfamily A, polypeptide 1, also called cholesterol side-chain cleavage enzyme; Cytochrome P450 11A1 (CYP11A1, EC 1.14.15.6) is also called cholesterol side-chain cleavage enzyme, cholesterol desmolase, or cytochrome P450(scc). It catalyzes the side-chain cleavage reaction of cholesterol to form pregnenolone, the precursor of all steroid hormones. Missense or nonsense mutations of the CYP11A1 gene cause mild to severe early-onset adrenal failure depending on the severity of the enzyme dysfunction/deficiency. CYP11A1 belongs to the large cytochrome P450 (P450, CYP) superfamily of heme-containing proteins that catalyze a variety of oxidative reactions of a large number of structurally different endogenous and exogenous compounds in organisms from all major domains of life. CYPs bind their diverse ligands in a buried, hydrophobic active site, which is accessed through a substrate access channel formed by two flexible helices and their connecting loop.


Pssm-ID: 410736 [Multi-domain]  Cd Length: 425  Bit Score: 38.16  E-value: 7.30e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A      264 LIPAGVEELLRINlSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPgsielDRPNPT----------S 333
Cdd:cd20643 295 LLKAAIKETLRLH-PVAVSLQRYITEDLVLQNYHIPAGTLVQVGLYAMGRDPTVFPKP-----EKYDPErwlskdithfR 368
                        90       100       110
                ....*....|....*....|....*....|..
6UPI_A      334 HLAFGRGQHFCpgsaLGRRHAQIGIEALLKKM 365
Cdd:cd20643 369 NLGFGFGPRQC----LGRRIAETEMQLFLIHM 396
PLN02774 PLN02774
brassinosteroid-6-oxidase
281-350 9.03e-03

brassinosteroid-6-oxidase


Pssm-ID: 178373 [Multi-domain]  Cd Length: 463  Bit Score: 38.22  E-value: 9.03e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
6UPI_A       281 DGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIE----LDRpNPTSH---LAFGRGQHFCPGSALG 350
Cdd:PLN02774 344 NGVLRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNpwrwLDK-SLESHnyfFLFGGGTRLCPGKELG 419
PLN03141 PLN03141
3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
282-356 9.17e-03

3-epi-6-deoxocathasterone 23-monooxygenase; Provisional


Pssm-ID: 215600 [Multi-domain]  Cd Length: 452  Bit Score: 38.18  E-value: 9.17e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
6UPI_A       282 GLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDR-----PNPTSHLAFGRGQHFCPGSALGRRHAQI 356
Cdd:PLN03141 333 GVMRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENYDNPYQFNPWRwqekdMNNSSFTPFGGGQRLCPGLDLARLEASI 412
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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