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Conserved domains on  [gi|231274|pdb|7WGA|A]
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Chain A, WHEAT GERM LECTIN

Protein Classification

ChtBD1 domain-containing protein( domain architecture ID 10445991)

ChtBD1 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Chitin_bind_1 pfam00187
Chitin recognition protein;
88-124 1.43e-08

Chitin recognition protein;


:

Pssm-ID: 459705  Cd Length: 38  Bit Score: 48.31  E-value: 1.43e-08
                          10        20        30
                  ....*....|....*....|....*....|....*..
7WGA_A         88 KCGSQAGGKLCPNNLCCSQWGFCGLGSEFCGGGCQSG 124
Cdd:pfam00187   1 RCGKQAGGATCPNNLCCSQYGYCGTTSDYCGDGCQSG 37
Chitin_bind_1 pfam00187
Chitin recognition protein;
2-38 9.19e-08

Chitin recognition protein;


:

Pssm-ID: 459705  Cd Length: 38  Bit Score: 46.00  E-value: 9.19e-08
                          10        20        30
                  ....*....|....*....|....*....|....*..
7WGA_A          2 RCGEQGSNMECPNNLCCSQYGYCGMGGDYCGKGCQNG 38
Cdd:pfam00187   1 RCGKQAGGATCPNNLCCSQYGYCGTTSDYCGDGCQSG 37
Chitin_bind_1 pfam00187
Chitin recognition protein;
45-81 9.79e-08

Chitin recognition protein;


:

Pssm-ID: 459705  Cd Length: 38  Bit Score: 46.00  E-value: 9.79e-08
                          10        20        30
                  ....*....|....*....|....*....|....*..
7WGA_A         45 RCGSQAGGATCTNNQCCSQYGYCGFGAEYCGAGCQGG 81
Cdd:pfam00187   1 RCGKQAGGATCPNNLCCSQYGYCGTTSDYCGDGCQSG 37
Chitin_bind_1 pfam00187
Chitin recognition protein;
132-167 1.38e-06

Chitin recognition protein;


:

Pssm-ID: 459705  Cd Length: 38  Bit Score: 42.92  E-value: 1.38e-06
                          10        20        30
                  ....*....|....*....|....*....|....*.
7WGA_A        132 CGKDAGGRVCTNNYCCSKWGSCGIGPGYCGAGCQSG 167
Cdd:pfam00187   2 CGKQAGGATCPNNLCCSQYGYCGTTSDYCGDGCQSG 37
 
Name Accession Description Interval E-value
Chitin_bind_1 pfam00187
Chitin recognition protein;
88-124 1.43e-08

Chitin recognition protein;


Pssm-ID: 459705  Cd Length: 38  Bit Score: 48.31  E-value: 1.43e-08
                          10        20        30
                  ....*....|....*....|....*....|....*..
7WGA_A         88 KCGSQAGGKLCPNNLCCSQWGFCGLGSEFCGGGCQSG 124
Cdd:pfam00187   1 RCGKQAGGATCPNNLCCSQYGYCGTTSDYCGDGCQSG 37
Chitin_bind_1 pfam00187
Chitin recognition protein;
2-38 9.19e-08

Chitin recognition protein;


Pssm-ID: 459705  Cd Length: 38  Bit Score: 46.00  E-value: 9.19e-08
                          10        20        30
                  ....*....|....*....|....*....|....*..
7WGA_A          2 RCGEQGSNMECPNNLCCSQYGYCGMGGDYCGKGCQNG 38
Cdd:pfam00187   1 RCGKQAGGATCPNNLCCSQYGYCGTTSDYCGDGCQSG 37
Chitin_bind_1 pfam00187
Chitin recognition protein;
45-81 9.79e-08

Chitin recognition protein;


Pssm-ID: 459705  Cd Length: 38  Bit Score: 46.00  E-value: 9.79e-08
                          10        20        30
                  ....*....|....*....|....*....|....*..
7WGA_A         45 RCGSQAGGATCTNNQCCSQYGYCGFGAEYCGAGCQGG 81
Cdd:pfam00187   1 RCGKQAGGATCPNNLCCSQYGYCGTTSDYCGDGCQSG 37
ChtBD1 smart00270
Chitin binding domain;
88-124 4.36e-07

Chitin binding domain;


Pssm-ID: 214593  Cd Length: 38  Bit Score: 44.28  E-value: 4.36e-07
                           10        20        30
                   ....*....|....*....|....*....|....*..
7WGA_A          88 KCGSQAGGKLCPNNLCCSQWGFCGLGSEFCGGGCQSG 124
Cdd:smart00270   1 RCGSQAGGKVCPNNLCCSQFGYCGSGDEYCGRGCQSQ 37
ChtBD1 cd00035
Hevein or type 1 chitin binding domain; Hevein or type 1 chitin binding domain (ChtBD1), a ...
 2-38 4.82e-07

Hevein or type 1 chitin binding domain; Hevein or type 1 chitin binding domain (ChtBD1), a lectin domain found in proteins from plants and fungi that bind N-acetylglucosamine, plant endochitinases, wound-induced proteins such as hevein, a major IgE-binding allergen in natural rubber latex, and the alpha subunit of Kluyveromyces lactis killer toxin. This domain is involved in the recognition and/or binding of chitin subunits; it typically occurs N-terminal to glycosyl hydrolase domains in chitinases, together with other carbohydrate-binding domains, or by itself in tandem-repeat arrangements.


Pssm-ID: 211311  Cd Length: 39  Bit Score: 44.30  E-value: 4.82e-07
                        10        20        30
                ....*....|....*....|....*....|....*..
7WGA_A        2 RCGEQGSNMECPNNLCCSQYGYCGMGGDYCGKGCQNG 38
Cdd:cd00035   1 RCGSQAGGPPCPNNLCCSQYGYCGTGDDYCGEGCQSQ 37
ChtBD1 smart00270
Chitin binding domain;
2-38 1.16e-06

Chitin binding domain;


Pssm-ID: 214593  Cd Length: 38  Bit Score: 43.12  E-value: 1.16e-06
                           10        20        30
                   ....*....|....*....|....*....|....*..
7WGA_A           2 RCGEQGSNMECPNNLCCSQYGYCGMGGDYCGKGCQNG 38
Cdd:smart00270   1 RCGSQAGGKVCPNNLCCSQFGYCGSGDEYCGRGCQSQ 37
Chitin_bind_1 pfam00187
Chitin recognition protein;
132-167 1.38e-06

Chitin recognition protein;


Pssm-ID: 459705  Cd Length: 38  Bit Score: 42.92  E-value: 1.38e-06
                          10        20        30
                  ....*....|....*....|....*....|....*.
7WGA_A        132 CGKDAGGRVCTNNYCCSKWGSCGIGPGYCGAGCQSG 167
Cdd:pfam00187   2 CGKQAGGATCPNNLCCSQYGYCGTTSDYCGDGCQSG 37
ChtBD1 smart00270
Chitin binding domain;
132-167 3.97e-06

Chitin binding domain;


Pssm-ID: 214593  Cd Length: 38  Bit Score: 41.97  E-value: 3.97e-06
                           10        20        30
                   ....*....|....*....|....*....|....*.
7WGA_A         132 CGKDAGGRVCTNNYCCSKWGSCGIGPGYCGAGCQSG 167
Cdd:smart00270   2 CGSQAGGKVCPNNLCCSQFGYCGSGDEYCGRGCQSQ 37
ChtBD1 smart00270
Chitin binding domain;
45-81 4.40e-06

Chitin binding domain;


Pssm-ID: 214593  Cd Length: 38  Bit Score: 41.58  E-value: 4.40e-06
                           10        20        30
                   ....*....|....*....|....*....|....*..
7WGA_A          45 RCGSQAGGATCTNNQCCSQYGYCGFGAEYCGAGCQGG 81
Cdd:smart00270   1 RCGSQAGGKVCPNNLCCSQFGYCGSGDEYCGRGCQSQ 37
ChtBD1 cd00035
Hevein or type 1 chitin binding domain; Hevein or type 1 chitin binding domain (ChtBD1), a ...
 45-79 6.36e-06

Hevein or type 1 chitin binding domain; Hevein or type 1 chitin binding domain (ChtBD1), a lectin domain found in proteins from plants and fungi that bind N-acetylglucosamine, plant endochitinases, wound-induced proteins such as hevein, a major IgE-binding allergen in natural rubber latex, and the alpha subunit of Kluyveromyces lactis killer toxin. This domain is involved in the recognition and/or binding of chitin subunits; it typically occurs N-terminal to glycosyl hydrolase domains in chitinases, together with other carbohydrate-binding domains, or by itself in tandem-repeat arrangements.


Pssm-ID: 211311  Cd Length: 39  Bit Score: 41.22  E-value: 6.36e-06
                        10        20        30
                ....*....|....*....|....*....|....*
7WGA_A       45 RCGSQAGGATCTNNQCCSQYGYCGFGAEYCGAGCQ 79
Cdd:cd00035   1 RCGSQAGGPPCPNNLCCSQYGYCGTGDDYCGEGCQ 35
ChtBD1 cd00035
Hevein or type 1 chitin binding domain; Hevein or type 1 chitin binding domain (ChtBD1), a ...
 89-124 7.12e-06

Hevein or type 1 chitin binding domain; Hevein or type 1 chitin binding domain (ChtBD1), a lectin domain found in proteins from plants and fungi that bind N-acetylglucosamine, plant endochitinases, wound-induced proteins such as hevein, a major IgE-binding allergen in natural rubber latex, and the alpha subunit of Kluyveromyces lactis killer toxin. This domain is involved in the recognition and/or binding of chitin subunits; it typically occurs N-terminal to glycosyl hydrolase domains in chitinases, together with other carbohydrate-binding domains, or by itself in tandem-repeat arrangements.


Pssm-ID: 211311  Cd Length: 39  Bit Score: 41.22  E-value: 7.12e-06
                        10        20        30
                ....*....|....*....|....*....|....*.
7WGA_A       89 CGSQAGGKLCPNNLCCSQWGFCGLGSEFCGGGCQSG 124
Cdd:cd00035   2 CGSQAGGPPCPNNLCCSQYGYCGTGDDYCGEGCQSQ 37
ChtBD1 cd00035
Hevein or type 1 chitin binding domain; Hevein or type 1 chitin binding domain (ChtBD1), a ...
 132-167 5.13e-05

Hevein or type 1 chitin binding domain; Hevein or type 1 chitin binding domain (ChtBD1), a lectin domain found in proteins from plants and fungi that bind N-acetylglucosamine, plant endochitinases, wound-induced proteins such as hevein, a major IgE-binding allergen in natural rubber latex, and the alpha subunit of Kluyveromyces lactis killer toxin. This domain is involved in the recognition and/or binding of chitin subunits; it typically occurs N-terminal to glycosyl hydrolase domains in chitinases, together with other carbohydrate-binding domains, or by itself in tandem-repeat arrangements.


Pssm-ID: 211311  Cd Length: 39  Bit Score: 38.91  E-value: 5.13e-05
                        10        20        30
                ....*....|....*....|....*....|....*.
7WGA_A      132 CGKDAGGRVCTNNYCCSKWGSCGIGPGYCGAGCQSG 167
Cdd:cd00035   2 CGSQAGGPPCPNNLCCSQYGYCGTGDDYCGEGCQSQ 37
 
Name Accession Description Interval E-value
Chitin_bind_1 pfam00187
Chitin recognition protein;
88-124 1.43e-08

Chitin recognition protein;


Pssm-ID: 459705  Cd Length: 38  Bit Score: 48.31  E-value: 1.43e-08
                          10        20        30
                  ....*....|....*....|....*....|....*..
7WGA_A         88 KCGSQAGGKLCPNNLCCSQWGFCGLGSEFCGGGCQSG 124
Cdd:pfam00187   1 RCGKQAGGATCPNNLCCSQYGYCGTTSDYCGDGCQSG 37
Chitin_bind_1 pfam00187
Chitin recognition protein;
2-38 9.19e-08

Chitin recognition protein;


Pssm-ID: 459705  Cd Length: 38  Bit Score: 46.00  E-value: 9.19e-08
                          10        20        30
                  ....*....|....*....|....*....|....*..
7WGA_A          2 RCGEQGSNMECPNNLCCSQYGYCGMGGDYCGKGCQNG 38
Cdd:pfam00187   1 RCGKQAGGATCPNNLCCSQYGYCGTTSDYCGDGCQSG 37
Chitin_bind_1 pfam00187
Chitin recognition protein;
45-81 9.79e-08

Chitin recognition protein;


Pssm-ID: 459705  Cd Length: 38  Bit Score: 46.00  E-value: 9.79e-08
                          10        20        30
                  ....*....|....*....|....*....|....*..
7WGA_A         45 RCGSQAGGATCTNNQCCSQYGYCGFGAEYCGAGCQGG 81
Cdd:pfam00187   1 RCGKQAGGATCPNNLCCSQYGYCGTTSDYCGDGCQSG 37
ChtBD1 smart00270
Chitin binding domain;
88-124 4.36e-07

Chitin binding domain;


Pssm-ID: 214593  Cd Length: 38  Bit Score: 44.28  E-value: 4.36e-07
                           10        20        30
                   ....*....|....*....|....*....|....*..
7WGA_A          88 KCGSQAGGKLCPNNLCCSQWGFCGLGSEFCGGGCQSG 124
Cdd:smart00270   1 RCGSQAGGKVCPNNLCCSQFGYCGSGDEYCGRGCQSQ 37
ChtBD1 cd00035
Hevein or type 1 chitin binding domain; Hevein or type 1 chitin binding domain (ChtBD1), a ...
 2-38 4.82e-07

Hevein or type 1 chitin binding domain; Hevein or type 1 chitin binding domain (ChtBD1), a lectin domain found in proteins from plants and fungi that bind N-acetylglucosamine, plant endochitinases, wound-induced proteins such as hevein, a major IgE-binding allergen in natural rubber latex, and the alpha subunit of Kluyveromyces lactis killer toxin. This domain is involved in the recognition and/or binding of chitin subunits; it typically occurs N-terminal to glycosyl hydrolase domains in chitinases, together with other carbohydrate-binding domains, or by itself in tandem-repeat arrangements.


Pssm-ID: 211311  Cd Length: 39  Bit Score: 44.30  E-value: 4.82e-07
                        10        20        30
                ....*....|....*....|....*....|....*..
7WGA_A        2 RCGEQGSNMECPNNLCCSQYGYCGMGGDYCGKGCQNG 38
Cdd:cd00035   1 RCGSQAGGPPCPNNLCCSQYGYCGTGDDYCGEGCQSQ 37
ChtBD1 smart00270
Chitin binding domain;
2-38 1.16e-06

Chitin binding domain;


Pssm-ID: 214593  Cd Length: 38  Bit Score: 43.12  E-value: 1.16e-06
                           10        20        30
                   ....*....|....*....|....*....|....*..
7WGA_A           2 RCGEQGSNMECPNNLCCSQYGYCGMGGDYCGKGCQNG 38
Cdd:smart00270   1 RCGSQAGGKVCPNNLCCSQFGYCGSGDEYCGRGCQSQ 37
Chitin_bind_1 pfam00187
Chitin recognition protein;
132-167 1.38e-06

Chitin recognition protein;


Pssm-ID: 459705  Cd Length: 38  Bit Score: 42.92  E-value: 1.38e-06
                          10        20        30
                  ....*....|....*....|....*....|....*.
7WGA_A        132 CGKDAGGRVCTNNYCCSKWGSCGIGPGYCGAGCQSG 167
Cdd:pfam00187   2 CGKQAGGATCPNNLCCSQYGYCGTTSDYCGDGCQSG 37
ChtBD1 smart00270
Chitin binding domain;
132-167 3.97e-06

Chitin binding domain;


Pssm-ID: 214593  Cd Length: 38  Bit Score: 41.97  E-value: 3.97e-06
                           10        20        30
                   ....*....|....*....|....*....|....*.
7WGA_A         132 CGKDAGGRVCTNNYCCSKWGSCGIGPGYCGAGCQSG 167
Cdd:smart00270   2 CGSQAGGKVCPNNLCCSQFGYCGSGDEYCGRGCQSQ 37
ChtBD1 smart00270
Chitin binding domain;
45-81 4.40e-06

Chitin binding domain;


Pssm-ID: 214593  Cd Length: 38  Bit Score: 41.58  E-value: 4.40e-06
                           10        20        30
                   ....*....|....*....|....*....|....*..
7WGA_A          45 RCGSQAGGATCTNNQCCSQYGYCGFGAEYCGAGCQGG 81
Cdd:smart00270   1 RCGSQAGGKVCPNNLCCSQFGYCGSGDEYCGRGCQSQ 37
ChtBD1 cd00035
Hevein or type 1 chitin binding domain; Hevein or type 1 chitin binding domain (ChtBD1), a ...
 45-79 6.36e-06

Hevein or type 1 chitin binding domain; Hevein or type 1 chitin binding domain (ChtBD1), a lectin domain found in proteins from plants and fungi that bind N-acetylglucosamine, plant endochitinases, wound-induced proteins such as hevein, a major IgE-binding allergen in natural rubber latex, and the alpha subunit of Kluyveromyces lactis killer toxin. This domain is involved in the recognition and/or binding of chitin subunits; it typically occurs N-terminal to glycosyl hydrolase domains in chitinases, together with other carbohydrate-binding domains, or by itself in tandem-repeat arrangements.


Pssm-ID: 211311  Cd Length: 39  Bit Score: 41.22  E-value: 6.36e-06
                        10        20        30
                ....*....|....*....|....*....|....*
7WGA_A       45 RCGSQAGGATCTNNQCCSQYGYCGFGAEYCGAGCQ 79
Cdd:cd00035   1 RCGSQAGGPPCPNNLCCSQYGYCGTGDDYCGEGCQ 35
ChtBD1 cd00035
Hevein or type 1 chitin binding domain; Hevein or type 1 chitin binding domain (ChtBD1), a ...
 89-124 7.12e-06

Hevein or type 1 chitin binding domain; Hevein or type 1 chitin binding domain (ChtBD1), a lectin domain found in proteins from plants and fungi that bind N-acetylglucosamine, plant endochitinases, wound-induced proteins such as hevein, a major IgE-binding allergen in natural rubber latex, and the alpha subunit of Kluyveromyces lactis killer toxin. This domain is involved in the recognition and/or binding of chitin subunits; it typically occurs N-terminal to glycosyl hydrolase domains in chitinases, together with other carbohydrate-binding domains, or by itself in tandem-repeat arrangements.


Pssm-ID: 211311  Cd Length: 39  Bit Score: 41.22  E-value: 7.12e-06
                        10        20        30
                ....*....|....*....|....*....|....*.
7WGA_A       89 CGSQAGGKLCPNNLCCSQWGFCGLGSEFCGGGCQSG 124
Cdd:cd00035   2 CGSQAGGPPCPNNLCCSQYGYCGTGDDYCGEGCQSQ 37
ChtBD1_GH19_hevein cd06921
Hevein or Type 1 chitin binding domain subfamily co-occuring with family 19 glycosyl ...
 88-123 1.78e-05

Hevein or Type 1 chitin binding domain subfamily co-occuring with family 19 glycosyl hydrolases or with barwin domains; This subfamily includes Hevein, a major IgE-binding allergen in natural rubber latex. ChtBD1 is a lectin domain found in proteins from plants and fungi that bind N-acetylglucosamine, plant endochitinases, wound-induced proteins, and the alpha subunit of Kluyveromyces lactis killer toxin. This domain is involved in the recognition and/or binding of chitin subunits; it typically occurs N-terminal to glycosyl hydrolase domains in chitinases, together with other carbohydrate-binding domains, or by itself in tandem-repeat arrangements.


Pssm-ID: 211312  Cd Length: 40  Bit Score: 40.17  E-value: 1.78e-05
                        10        20        30
                ....*....|....*....|....*....|....*.
7WGA_A       88 KCGSQAGGKLCPNNLCCSQWGFCGLGSEFCGGGCQS 123
Cdd:cd06921   2 QCGRQAGGALCPGGLCCSQWGWCGSTDDYCGDGCQS 37
ChtBD1 cd00035
Hevein or type 1 chitin binding domain; Hevein or type 1 chitin binding domain (ChtBD1), a ...
 132-167 5.13e-05

Hevein or type 1 chitin binding domain; Hevein or type 1 chitin binding domain (ChtBD1), a lectin domain found in proteins from plants and fungi that bind N-acetylglucosamine, plant endochitinases, wound-induced proteins such as hevein, a major IgE-binding allergen in natural rubber latex, and the alpha subunit of Kluyveromyces lactis killer toxin. This domain is involved in the recognition and/or binding of chitin subunits; it typically occurs N-terminal to glycosyl hydrolase domains in chitinases, together with other carbohydrate-binding domains, or by itself in tandem-repeat arrangements.


Pssm-ID: 211311  Cd Length: 39  Bit Score: 38.91  E-value: 5.13e-05
                        10        20        30
                ....*....|....*....|....*....|....*.
7WGA_A      132 CGKDAGGRVCTNNYCCSKWGSCGIGPGYCGAGCQSG 167
Cdd:cd00035   2 CGSQAGGPPCPNNLCCSQYGYCGTGDDYCGEGCQSQ 37
ChtBD1_GH19_hevein cd06921
Hevein or Type 1 chitin binding domain subfamily co-occuring with family 19 glycosyl ...
 45-79 1.76e-03

Hevein or Type 1 chitin binding domain subfamily co-occuring with family 19 glycosyl hydrolases or with barwin domains; This subfamily includes Hevein, a major IgE-binding allergen in natural rubber latex. ChtBD1 is a lectin domain found in proteins from plants and fungi that bind N-acetylglucosamine, plant endochitinases, wound-induced proteins, and the alpha subunit of Kluyveromyces lactis killer toxin. This domain is involved in the recognition and/or binding of chitin subunits; it typically occurs N-terminal to glycosyl hydrolase domains in chitinases, together with other carbohydrate-binding domains, or by itself in tandem-repeat arrangements.


Pssm-ID: 211312  Cd Length: 40  Bit Score: 34.77  E-value: 1.76e-03
                        10        20        30
                ....*....|....*....|....*....|....*
7WGA_A       45 RCGSQAGGATCTNNQCCSQYGYCGFGAEYCGAGCQ 79
Cdd:cd06921   2 QCGRQAGGALCPGGLCCSQWGWCGSTDDYCGDGCQ 36
ChtBD1_GH19_hevein cd06921
Hevein or Type 1 chitin binding domain subfamily co-occuring with family 19 glycosyl ...
 132-166 7.03e-03

Hevein or Type 1 chitin binding domain subfamily co-occuring with family 19 glycosyl hydrolases or with barwin domains; This subfamily includes Hevein, a major IgE-binding allergen in natural rubber latex. ChtBD1 is a lectin domain found in proteins from plants and fungi that bind N-acetylglucosamine, plant endochitinases, wound-induced proteins, and the alpha subunit of Kluyveromyces lactis killer toxin. This domain is involved in the recognition and/or binding of chitin subunits; it typically occurs N-terminal to glycosyl hydrolase domains in chitinases, together with other carbohydrate-binding domains, or by itself in tandem-repeat arrangements.


Pssm-ID: 211312  Cd Length: 40  Bit Score: 33.23  E-value: 7.03e-03
                        10        20        30
                ....*....|....*....|....*....|....*
7WGA_A      132 CGKDAGGRVCTNNYCCSKWGSCGIGPGYCGAGCQS 166
Cdd:cd06921   3 CGRQAGGALCPGGLCCSQWGWCGSTDDYCGDGCQS 37
ChtBD1_GH19_hevein cd06921
Hevein or Type 1 chitin binding domain subfamily co-occuring with family 19 glycosyl ...
 2-36 7.17e-03

Hevein or Type 1 chitin binding domain subfamily co-occuring with family 19 glycosyl hydrolases or with barwin domains; This subfamily includes Hevein, a major IgE-binding allergen in natural rubber latex. ChtBD1 is a lectin domain found in proteins from plants and fungi that bind N-acetylglucosamine, plant endochitinases, wound-induced proteins, and the alpha subunit of Kluyveromyces lactis killer toxin. This domain is involved in the recognition and/or binding of chitin subunits; it typically occurs N-terminal to glycosyl hydrolase domains in chitinases, together with other carbohydrate-binding domains, or by itself in tandem-repeat arrangements.


Pssm-ID: 211312  Cd Length: 40  Bit Score: 32.85  E-value: 7.17e-03
                        10        20        30
                ....*....|....*....|....*....|....*
7WGA_A        2 RCGEQGSNMECPNNLCCSQYGYCGMGGDYCGKGCQ 36
Cdd:cd06921   2 QCGRQAGGALCPGGLCCSQWGWCGSTDDYCGDGCQ 36
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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