|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
4.53e-177 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 494.34 E-value: 4.53e-177
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 1 MNPQAKLIFIASLLMGSTITMSSNHWITAWAGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASTLILFSSMTNAWD 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 81 TGQWDITQLTHPTSCVILTTAIAMKLGLAPFHFWFPEVLQGCSLITGLLLSTAMKFPPMTLLFMASQSLNPTLMTFMAIL 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 161 SAALGGWTGLNQTQTRKILAFSSISHLGWMAAIITYSPKLALLNFYLYVMITAAVFLTLNSIKALKLSTLMTTWAKTPSL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMIPTATIMALLSLLGLFFYLRLAYCATITLPPHTTNHMKQWHTNKP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 7672621 321 TNTLTAILVTMSIALLPMSPTILALI 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
2.02e-146 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 416.90 E-value: 2.02e-146
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 1 MNPQAKLIFIASLLMGSTITMSSNHWITAWAGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASTLILFSSMTNAWD 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 81 TGQWDITQLTHPTSCVILTTAIAMKLGLAPFHFWFPEVLQGCSLITGLLLSTAMKFPPMTLLfMASQSLNPTLMTFMAIL 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALI-LQIAPTNPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 161 SAALGGWTGLNQTQTRKILAFSSISHLGWMAAIITYSPKLALLNFYLYVMITAAVFLTLNSIKALKLSTLMTTWAKTPSL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMIPTATIMALLSLLGLFFYLRLAYCATITLPPHTTNHMKQWHTNKP 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|....*..
gi 7672621 321 TNTLT-AILVTMSIALLPMSPTILALI 346
Cdd:MTH00135 320 QLTLPlAISTTATLMLLPLTPAILALL 346
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
7.63e-146 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 415.47 E-value: 7.63e-146
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 1 MNPQAKLIFIASLLMGSTITMSSNHWITAWAGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASTLILFSSMTNAWD 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 81 TGQWDITQLTHPTSCVILTTAIAMKLGLAPFHFWFPEVLQGCSLITGLLLSTAMKFPPMTLLFMASQSLNPTLMTFMAIL 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 161 SAALGGWTGLNQTQTRKILAFSSISHLGWMAAIITYSPKLALLNFYLYVMITAAVFLTLNSIKALKLSTLMTTWAKTPSL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMIPTATIMALLSLLGLFFYLRLAYCATITLPPHTTNHMKQWHTNKP 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*.
gi 7672621 321 TNTLTAILVTMSIALLPMSPTILALI 346
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILNLF 346
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
8.31e-127 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 367.25 E-value: 8.31e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 1 MNPQAKLIFIASLLMGSTITMSSNHWITAWAGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASTLILFSSMTNAWD 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 81 TGQWDITQLTHPTSCVILTTAIAMKLGLAPFHFWFPEVLQGCSLITGLLLSTAMKFPPMTLLFMASQSLNPTLMTFMAIL 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 161 SAALGGWTGLNQTQTRKILAFSSISHLGWMAAIITYSPKLALLNFYLYVMITAAVFLTLNSIKALKLSTLMTTWAKTPSL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMIPTATIMALLSLLGLFFYLRLAYCATITLPPhTTNHMK-QWH-TN 318
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFP-STNNMKmKWQfEN 319
|
330 340
....*....|....*....|....*..
gi 7672621 319 KPTNTLTAILVTMSIALLPMSPTILAL 345
Cdd:MTH00105 320 TKPMTLLPTLIILSTMLLPLTPMLSIL 346
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
4.89e-105 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 311.90 E-value: 4.89e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 1 MNPQAKLIFIASLLMGSTITMSSNHWITAWAGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASTLILFSSMTNAWD 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 81 TGQWDITQLTHPTSCVILTTAIAMKLGLAPFHFWFPEVLQGCSLITGLLLSTAMKFPPMTLLFMASQSLNPTLMTFMAIL 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 161 SAALGGWTGLNQTQTRKILAFSSISHLGWMAAIITYSPKLALLNFYLYVMITAAVFLTLNSIKALKLSTLMTTWAKTPSL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMIPTATIMALLSLLGLFFYLRLAYCATITLPPHTTNHMKQWHTNKP 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 7672621 321 TNTLTAILVTMSIALLPMSPTILALI 346
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-346 |
1.22e-92 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 280.28 E-value: 1.22e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 1 MNPQAKLIFIASLLMGSTITMSSNHWITAWAGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASTLILFSSMTNAWD 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 81 TGQWDITQLTHPTSCVILTTAIAMKLGLAPFHFWFPEVLQGCSLITGLLLSTAMKFPPMTLLFMASQSLNPTLMTFMAIL 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 161 SAALGGWTGLNQTQTRKILAFSSISHLGWMAAIITYSPKLALLNFYLYVMITAAVFLTLNSIKALKLSTLMTTWAKTPSL 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMIPTATIMALLSLLGLFFYLRLAYCATITLPPHTTNHMKQWHTNKP 320
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGN 320
|
330 340
....*....|....*....|....*....
gi 7672621 321 TNTLTAI---LVTMSIALLPMSPTILALI 346
Cdd:MTH00041 321 ITVYGVIlsiLSSISILGLLLIPLFLSFL 349
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-343 |
3.71e-67 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 214.30 E-value: 3.71e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 1 MNPQAKLIFIASLLMGSTITMSSNHWITAWAGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASTLILFSSMTNAWd 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 81 tgqwdITQLTHPTSCVILTTAIAMKLGLAPFHFWFPEVLQGCSLITGLLLSTAMKFPPMTLLfmaSQSLNPTLMTFMAIL 160
Cdd:MTH00160 81 -----NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILL---SYLINNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 161 SAALGGWTGLNQTQTRKILAFSSISHLGWMAAIITYSPKLALLNFYLYVMITAAVFLTLNSIKALKLSTLMTTWAKTPSL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMIPTATIMALLSLLGLFFYLRLAYCATITLPPHTTNHMKQwhTNKP 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLKK--KKNK 310
|
330 340
....*....|....*....|...
gi 7672621 321 TNTLTAILVTMSIALLPMSPTIL 343
Cdd:MTH00160 311 FSLILNFLSFISLFGLILSSLLF 333
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
5-302 |
2.69e-53 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 178.16 E-value: 2.69e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 5 AKLIFIASLLMGSTITMSSNHWITAWAGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASTLILFSSMTNAWDTGQW 84
Cdd:MTH00144 5 SNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 85 DITqlthptscVILTTAIAMKLGLAPFHFWFPEVLQGCSLITGLLLSTAMKFPPMTLLFMASQSLNP-TLMTFMAILSAA 163
Cdd:MTH00144 85 FSM--------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLaYLLCVISVLSAL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 164 LGGWTGLNQTQTRKILAFSSISHLGWMAAIITYSPKLALLNFYLYVMITAAVFLTLNSiKALKLSTLMTTWAKTPSLSAM 243
Cdd:MTH00144 157 VGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWS-GDSGSMKDLGSLKPSYKTGLS 235
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 7672621 244 LMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMIPTATIMALLSLLGLFFYLRLAYCATI 302
Cdd:MTH00144 236 IISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFL 294
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
7-340 |
2.03e-52 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 176.12 E-value: 2.03e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 7 LIFIASLLMGSTITMSSNHWITAWAGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASTLILFSSmtnawdTGQWDI 86
Cdd:MTH00011 9 FLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------TMMWSF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 87 TQLTHPTSCVILTTAIAMKLGLAPFHFWFPEVLQGCSLITGLLLSTAMKFPPMTLLFMASQSLNPTLMTFMAILSAALGG 166
Cdd:MTH00011 83 PSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 167 WTGLNQTQTRKILAFSSISHLGWMAAIITYSPKLALLNFYLYVMITAAVFLTLNSIKALKLSTLMTTWAKTPSLSAMLML 246
Cdd:MTH00011 163 LGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFI 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 247 TLLSLAGLPPLTGFLPKWLIIQELTKQEMIPTATIMALLSLLGLFFYLRLAYcATITLPPHTTNhmkqwHTNKPTNTLTA 326
Cdd:MTH00011 243 MLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIF-NFMYLSPTFSS-----LKSAPYEPKTK 316
|
330
....*....|....
gi 7672621 327 ILVTMSIALLPMSP 340
Cdd:MTH00011 317 ILISMCTLSLGLIP 330
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
8-298 |
3.73e-42 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 149.05 E-value: 3.73e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 8 IFIASLLMGSTITMSSNHWITAWAGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASTLILFSSMTNAWDTgqwdit 87
Cdd:MTH00197 2 LFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNL------ 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 88 qLTHPTSCVILTTAIAMKLGLAPFHFWFPEVLQGCSLITGLLLSTAMKFPPMTLLfmASQSLNPTLMTFMAILSAALGGW 167
Cdd:MTH00197 76 -YLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLIL--AFNSSSFMGLLICSVLSSLIGGI 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 168 TGLNQTQTRKILAFSSISHLGWMAAIITYSPKLALLNFYLYVMITAAVFLTLNSIKALKLSTLMTTWAKTPSLSAMLMLT 247
Cdd:MTH00197 153 GGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLS 232
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 7672621 248 LLSLAGLPPLTGFLPKWLIIQELTKQEMIPTATIMALLSLLGLFFYLRLAY 298
Cdd:MTH00197 233 FLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAY 283
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
12-298 |
1.37e-33 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 129.08 E-value: 1.37e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 12 SLLMGSTITM----SSNHWITAWAGLEINTLAVLPLIS-KSHHPRAIEAATKYFLVQAAASTLILF-SSMTNAWdTGQWD 85
Cdd:COG1007 106 ALLLFATLGMmlmaSANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYGA-TGSLN 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 86 ITQLTHPTS------------CVILTTAIAMKLGLAPFHFWFPEVLQGCSLITGLLLSTAMK----FPPMTLLFMASQSL 149
Cdd:COG1007 185 LAGIAAALAagganspllllgLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaafAALLRLLVEAFPGL 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 150 NP---TLMTFMAILSAALGGWTGLNQTQTRKILAFSSISHLGWM-AAIITYSPK-LALLNFYL--YVMITAAVFLTLNSI 222
Cdd:COG1007 265 AAdwqLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLlLGLAAGTPLgVSAALFYLlaYLFMNLGAFAVILLL 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 223 -KALKLSTLMTTWA----KTPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMIPTATIMALLSLLGLFFYLRLA 297
Cdd:COG1007 345 sRKGGEAEEIEDLAglarRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVV 424
|
.
gi 7672621 298 Y 298
Cdd:COG1007 425 K 425
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-296 |
2.19e-29 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 117.61 E-value: 2.19e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 14 LMGSTITMSSNHWITAWAGLEINTLAVLPLIS-KSHHPRAIEAATKYFLVQAAASTLILFSSMTNAWDTGQWDITQLTHP 92
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 93 TS------------CVILTTAIAMKLGLAPFHFWFPEVLQGCSLITGLLLSTAMK---FPPMT-LLFMASQSLNPT---L 153
Cdd:PRK05777 193 LAdgsgnsllllfgLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaaFAVLLrLLVVAFGGLSEDwqqV 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 154 MTFMAILSAALGGWTGLNQTQTRKILAFSSISHLGWM---AAIITYSPKLALLnFYL--YVMITAAVFLTLNSI-KALKL 227
Cdd:PRK05777 273 LAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLlvgLAAGTAEGYSAVL-FYLlaYLFMTLGAFGVISLLrRKGGE 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 7672621 228 STLMTTWA----KTPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMIPTATIMALLSLLGLFFYLRL 296
Cdd:PRK05777 352 AESISDFAglskRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-296 |
1.91e-28 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 113.20 E-value: 1.91e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 13 LLMGSTITMSSNHWITAWAGLEINTLAVLPLI-SKSHHPRAIEAATKYFLVQAAASTLILFS-------------SMTNA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 79 WDTGQWDITQLTHPTSCVILTTAIAMKLGLAPFHFWFPEVLQGCSLITGLLLSTAMKFPPMTLLFmasqSLNPTLMTFM- 157
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILV----SIGLNVNILLi 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 158 -AILSAALGGWTGLNQTQTRKILAFSSISHLG---WMAAIITY-SPKLALLNFYLYVMITAAVFLTLNSIKALK--LSTL 230
Cdd:MTH00196 158 gGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGfvlWGIEIGSFeSIQASLVYLFIYIIMSICVFSIILALNVYKnlIIEF 237
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 7672621 231 MTTWAKTPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMIPTATIMALLSLLGLFFYLRL 296
Cdd:MTH00196 238 SGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRI 303
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
8-296 |
8.01e-26 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 107.41 E-value: 8.01e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 8 IFIASLLMGSTITMSSNHWITAWAGLEINTLAVLPLIS-KSHHPRAIEAATKYFLVQAAASTLILFSSMTNAWDTGQWDI 86
Cdd:MTH00199 101 ILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSI 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 87 ----TQLTHPTSCVILTTAIAMKLGLAPFHFWFPEVLQGCSLITGLLLSTAMKFPPMTLLFMASQSLNPTLmtFMAILSA 162
Cdd:MTH00199 181 qginSILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVL--ICAVLSI 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 163 ALGGWTGLNQTQTRKILAFSSISHLG---WMAAIITY-SPKLALLNFYLYVMITAAVF---LTLNSIKALkLSTLMTTWA 235
Cdd:MTH00199 259 IYGAIGALNQTKIKRLLAYSGIGHMGfilFGVAIGSFeSIQASLIYMIIYVIMSICSFsiiLSLKLTKGL-IVEVSGLSR 337
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 7672621 236 KTPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMIPTATIMALLSLLGLFFYLRL 296
Cdd:MTH00199 338 KNPVIALTLALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRV 398
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
14-297 |
2.21e-25 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 106.19 E-value: 2.21e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 14 LMGSTITMSSNHWITAWAGLEINTLAVLPLIS-KSHHPRAIEAATKYFLVQAAASTLILFSSMTNAWDTGQWDITQLTHP 92
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 93 TSC------------VILTTAIAMKLGLAPFHFWFPEVLQGCSLITGLLLSTAMK----FPPMTLLFMASQSLNPTLMTF 156
Cdd:TIGR01770 192 LSNgmlnisllllgiVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKiaifAVFLRLFLYILFGFSEAWQIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 157 MAILSAA---LGGWTGLNQTQTRKILAFSSISHLGWMAAIITYSPKLALLNFYLYVMITA-------AVFLTLNSIK--- 223
Cdd:TIGR01770 272 LAIIAFLsmlIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYAlmslgafGVLSLLRSYKdew 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 7672621 224 ALKLSTLMTTWAKTPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMIPTATIMALLSLLGLFFYLRLA 297
Cdd:TIGR01770 352 IEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
1.55e-22 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 95.46 E-value: 1.55e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 23 SNHWITAWAGLEINTLAVLPLI-SKSHHPRAIEAATKYFLVQAAASTLILFSSMTNAWDTGQWDITQL-----------T 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 91 HPTSCVILTTAIAMKLGLAPFHFWFPEVLQGCSL-ITGLLLSTAMKFPPMTLLFMAS--QSLNPTLMTFMAILSAA---L 164
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTpVSALLAATLVKAGGYGLIRRSLlyLPSSPFIQQILLILAIIsmlL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 165 GGWTGLNQTQTRKILAFSSISHLGWM----AAIITYSPKLALLNFYLYVMITAAVFLTLNSIKALKLST-----LMTTWA 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMlialGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTrnirdYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 7672621 236 KTPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
9-296 |
6.38e-22 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 95.98 E-value: 6.38e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 9 FIASLLMGSTITMSSNHWITAWAGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASTLILFSSMTNAWDTGQWDITQ 88
Cdd:COG0651 112 LFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMAD 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 89 LTH----------PTSCVILTTAIAMKLGLAPFHFWFPEVLQGCS-----LITGLLLSTA----MKFppMTLLFMASQSL 149
Cdd:COG0651 192 LAArlaeldpgllLAAFALLLVGFGIKAALFPLHFWLPDAYPAAPspvsaLLSGLLTKVGvyaiLRV--LTLLFGADPAL 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 150 NP-TLMTFMAILSAALGGWTGLNQTQTRKILAFSSISHLGWMAAIITYSPKLALLNFYLYV----MITAAVFLTLNSI-- 222
Cdd:COG0651 270 FLgTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLlnhaLAKALLFLAAGAIer 349
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 7672621 223 --KALKLSTLMTTWAKTPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMIPTATIMALLSLLGLFFYLRL 296
Cdd:COG0651 350 atGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRI 425
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
3-302 |
5.02e-17 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 82.21 E-value: 5.02e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 3 PQAKLIFIASLLMGSTITMSSNHWITAWAGLEINTLAVLPLISKSHHPRAI---------EAATKYFLVQAAASTLILFS 73
Cdd:MTH00198 187 PRSGFALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFG 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 74 SMTNAWDTGQ----WDITQLTHPTSCVIL----------TTAIAMKLGLAPFHFWFPEVLQGCSLITGLLLSTAMKFPPM 139
Cdd:MTH00198 267 CALYFGFTGNegmlGTILSATLETTNIELrqgslgylfiTVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVY 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 140 TLLfmASQSLNPTLMTFMAILSAALGGWTGLNQTQTRKILAFSSISHLGWMAAIITYSPKLALLNFYLYVMI----TAAV 215
Cdd:MTH00198 347 ILL--TSLVITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTylvsALAS 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 216 FLTLNSIKAL---------------------KLSTLMTTWAKTPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQE 274
Cdd:MTH00198 425 FTVICTLEEFgtrtptsrqrdgsfgnynlvrRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFILVGSIKIA 504
|
330 340 350
....*....|....*....|....*....|....*
gi 7672621 275 MIPTATIMALLSLLGL-------FFYLRLAycATI 302
Cdd:MTH00198 505 FSSSLSIYYLVALFAIictcisaFYYIRIV--ATI 537
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
7-296 |
9.63e-16 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 78.12 E-value: 9.63e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 7 LIFIASLLMGSTITMSSNHWITAWAGLEINTLAVLPLISKSHHP-RAIEAATKYFLVQAAASTLILFS-SMTNAWDTGQW 84
Cdd:CHL00049 114 LLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTKKDvRSNEATMKYLLMGGASSSILVYGfSWLYGLSGGEI 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 85 DI---------TQLTHPTSCVI----LTTAIAMKLGLAPFHFWFPEVLQGC-----------SLITGLLLSTAMkfppMT 140
Cdd:CHL00049 194 ELqeivnglinTQMYNSPGISIalifITVGIGFKLSLAPFHQWTPDVYEGSptpvvaflsvtSKVAASALATRI----FD 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 141 LLFMASQSLNPTLMTFMAILSAALGGWTGLNQTQTRKILAFSSISHLGW-MAAIITYSPKLALLNFYLYVMITaaVFLTL 219
Cdd:CHL00049 270 IPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYvIIGIIVGDSNDGYASMITYMLFY--IFMNL 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 220 NSIKALKLSTLMT----------TWAKTPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMIPTATIMALLSLLG 289
Cdd:CHL00049 348 GTFACIVLFGLRTgtdnirdyagLYTKDPFLALSLALCLLSLGGIPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVIS 427
|
....*..
gi 7672621 290 LFFYLRL 296
Cdd:CHL00049 428 IYYYLKI 434
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
3.88e-13 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 70.08 E-value: 3.88e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 50 PRAIEAATKYFLVQAAASTLILFSS---------MTNAWDTGQWDITQLTHPT--SCVILTTAIAMKLGLAPFHFWFPEV 118
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYGSsllyglsggSTQLSAIALALITSPSLGLalALVFVIAGIAFKISAVPFHQWTPDV 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 119 LQGCSLITGLLLST-------AMKFPPMTLLFMASQSLNPTLMTFMAILSAALGGWTGLNQTQTRKILAFSSISHLGW-M 190
Cdd:PRK02504 237 YEGSPTPVVAFLSVgskaagfALAIRLLVTAFPSFDEQWKLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFvM 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 191 AAIIT-----YSPKLALLNFYLYVMITAAVFLTLNSIK--ALKLSTLMTTWAKTPSLSAMLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK02504 317 IGLVAgteagYASMVFYLLAYLFMNLGAFACVILFSLRtgTDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-334 |
8.66e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 66.06 E-value: 8.66e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 33 LEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASTLILFS-----SMTNAWDTGqwDITQLTHPTSCV-----ILTTAI 102
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGvgllyGVTGTLNMA--DLAGALAENPTVvtafgFVLLAL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 103 AMKLGLAPFHFWFPEVLQGCS-LITGLLLSTAMK----------FPPMTLLFMASQSLNPTLMTFmAILSAALGGWTGLN 171
Cdd:PRK08375 213 ALKAAVFPLHTWLPRAYPAAPpVVTALLSGLVTKvavyaliriyFTVFGGDFRFALGLGWLLAVL-ALLSMLVGSLAALG 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 172 QTQTRKILAFSSISHLGWMAAIITYSPKLALLNFYLYV-----------MITAAVFLTLNSIKALKLSTLMTtwaKTPSL 240
Cdd:PRK08375 292 QDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLlhhalmkgalfLAAGAIEVTYGTRRLSELSGLGR---RMPLT 368
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMIPTATIMALLSLLGLFFYLRLAYCATITLPPHTTNHmkqwHTNKP 320
Cdd:PRK08375 369 AAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGPPPPGSEA----PKQEA 444
|
330
....*....|....
gi 7672621 321 TNTLTAILVTMSIA 334
Cdd:PRK08375 445 PLGMLAPSLALALL 458
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
29-304 |
5.76e-10 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 60.83 E-value: 5.76e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 29 AWaglEINTLAVLPLISKSHhPRAIEAATKYFLVQAAASTLILFSSMTNAWDTGQWDITQLTHPTSCV---ILTTAIAMK 105
Cdd:PRK12650 138 AW---ELVSLASFFLIARSG-SGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDVWAekpGLTTVVAVL 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 106 LGLA--------PFHFWFPEVLQGCSLITGLLLSTAMKFPPMTLL--FMASQSLNPT---LMTFMAILSAALGGWTGLNQ 172
Cdd:PRK12650 214 IAVAaftksaqfPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLlrFSPVFHDVAVwnwLLIIVGMITALMGAVFAVQK 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 173 TQTRKILAFSSISHLGWMAAII----TYSPKLALLNFYLYVMITAAVFLTLNSIK----ALKLSTLMTTWAKTPSLSAML 244
Cdd:PRK12650 294 TDLKKLTAYSTVSQLGWIVATIgvgtPFALTAAVVHTLAHALFKSSLFMLIGVVDhqagTRDIRRLGSLWRRMPFTFVSV 373
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 245 MLTLLSLAGLPPLTGFLPKWLIIQELTKQEmIPTATIMALLSLLGLFFYLRLAYCATITL 304
Cdd:PRK12650 374 TIAALSMAAVPPLFGFVSKEGMLTAFLEAP-GGNAGVVLLLVGAALGAVFTFAYSARLVL 432
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
8.28e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 59.73 E-value: 8.28e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 33 LEINTLAVLPLIS-KSHHPRAIEAATKYFLVQAAASTLILFS---------SMTNAWDTGQWDIT-QLTHPTSCVILTTA 101
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGiallygqygTLNMAYLAVKMSENpTVVAKIALALFIAG 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 102 IAMKLGLAPFHFWFPEVLQGC-SLITGLLL--STAMKFPPMTLLF-MASQSLNPT----LMTFMAILSAALGGWTGLNQT 173
Cdd:PRK08376 230 LAMKSGAVPVHMWLPDAYPAApSSISAMLLviKQAGLYALARVLFsIYGPAINLAtvgwVIIILGCLTMFVGVAMAVVQK 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 174 QTRKILAFSSISHLGWM-----AAIITYSPKL-----------ALLNFYLYVMITAAVFLTLNSI------KAL-KLSTL 230
Cdd:PRK08376 310 DVKRLLAYHSVSQIGYMllglgVGLAALGDPAmasygeialagGIYHIVNHALYKALLFLTAGAViyetgtRNLnELGGL 389
|
250 260 270
....*....|....*....|....*....|....*.
gi 7672621 231 MTTWAKTpslSAMLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK08376 390 ARTMPKT---TIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
139-334 |
1.35e-09 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 59.19 E-value: 1.35e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 139 MTLLFMASQSLNPTLMTFMAILSAALGGWTGLNQTQTRKILAFSSISHLGWMAAiityspKLALLN--------FYLY-- 208
Cdd:PRK12663 260 FTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILL------GLALGTpagingaiFYLVhd 333
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 209 VMITAAVFLTLNSIKAL----KLSTLMTTWAKTPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQ-ELTKQEMIPTATIMA 283
Cdd:PRK12663 334 MVVKTALFLIAGSLVRLtgyrSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQgALDNGAYILLALMLI 413
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 7672621 284 --LLSLLGLFFYLRLAYCATiTLPPHTTNHMKQWHTNKPTNTLTAILVTMSIA 334
Cdd:PRK12663 414 tsLITMYSLFRIFFLAYWGD-KDGEEVNFKPIPLYRKLPLSILAVVVIAMGIA 465
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
2-298 |
1.51e-09 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 59.24 E-value: 1.51e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 2 NPQAKLIFIASLLMGSTITMSSNHWITAWAGLEINTLAVLPLISKSHHpRAIEAATKYFLVQAAASTLILFSSMTNAWDT 81
Cdd:PRK08668 96 NDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVPMGKK-ESRKASLKYFVLSAIGAYAMLYAIFLIYAKT 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 82 GQWDIT-------QLTHPTSCVILTTAIA----MKLGLAPFHFWFPEVLQGC-----SLITGLLLSTAMKFPPMTLLFMA 145
Cdd:PRK08668 175 GTFDFAdisqgliNDTSTGFALIVFLFLLafgvAKAGIFPLHVWAPDAYSEApqsfsAVLSGQLSKLGAYGFLLVLYVLP 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 146 SQSLNPTLMTFMAI------------LSAALGGWTGLNQTQTRKILAFSSISHLGW-MAAIITYSP---KLALLNFYLYV 209
Cdd:PRK08668 255 GTKLFSEFGTYRGVplfnyilawlgnISIIVGTLMAILQEDIKKLIAYSSVANGGYiLVGLGLGTSlgfAGGLFHVFNHA 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 210 MITAAVFLTLNSI----KALKLSTLMTTWAKTPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMIPTATIMALL 285
Cdd:PRK08668 335 LFKGLFFLIFAAViyrtGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAFFG 414
|
330
....*....|...
gi 7672621 286 SLLGLFFYLRLAY 298
Cdd:PRK08668 415 SIGSFLYVFRPLA 427
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
49-292 |
1.96e-09 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 58.55 E-value: 1.96e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 49 HPRAIEAATKYFLVQAAASTLILFSSMTNAWDTGQW--DITQLTHPTSCVILTTAI--------AMKLGLAPFHFWFPEV 118
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAAAPLPLTAQLLLflaffiafAVKVPMFPFHTWLPDA 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 119 LQ-----GCSLITGLLLSTA----MKFPpMTLLFMASQSLNPTLMTFmAILSAALGGWTGLNQTQTRKILAFSSISHLGW 189
Cdd:COG1008 236 HVeaptaGSVLLAGVLLKMGgyglLRFA-LPLFPEASAYFAPLLAAL-GVIGIIYGALVALAQTDLKRLIAYSSVSHMGF 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 190 MAAIItyspklALLNFY-----LYVM-----ITAAVFLTLNSIKAlKLSTLMTT-----WAKTPSLSAMLMLTLLSLAGL 254
Cdd:COG1008 314 VLLGI------FALNPLglqgaVLQMvshglITAALFLLVGVLYD-RTHTRDIAdlgglAKRMPVLAALFLLAALASLGL 386
|
250 260 270
....*....|....*....|....*....|....*...
gi 7672621 255 PPLTGFLPKWLIIQELtkqemIPTATIMALLSLLGLFF 292
Cdd:COG1008 387 PGTSGFVGEFLVLLGA-----FQVNPWLAILAALGLIL 419
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-268 |
8.59e-09 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 56.49 E-value: 8.59e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 50 PRAIEAATKYFLVQAAASTLILFSSMTNAWDTGQ-WDITQL-THPTSCVILT-------TAIAMKLGLAPFHFWFPEV-- 118
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGtFDLLELlNLPLPFGVQTwlflaffIAFAVKVPLFPLHTWLPDAhv 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 119 ---LQGCSLITGLLLSTA----MKFpPMTLLFMASQSLNPTLMtFMAILSAALGGWTGLNQTQTRKILAFSSISHLGWMA 191
Cdd:TIGR01972 232 eapTAGSVILAGVLLKMGtygfLRF-NLPLFPDASLYFAPVLA-ALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVL 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 192 AIITYSPKLALLNFYLYV----MITAAVFLTLNSI----KALKLSTLMTTWAKTPSLSAMLMLTLLSLAGLPPLTGFLPK 263
Cdd:TIGR01972 310 LGIFSFNELGISGAVFQMishgLITAALFLLVGVLyeraHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGE 389
|
....*
gi 7672621 264 WLIIQ 268
Cdd:TIGR01972 390 FLILL 394
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-298 |
2.43e-08 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 55.42 E-value: 2.43e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 34 EINTLAVLPLISKSHHPRAIEAATKYFLVQAAASTLILFSSMTNAWDTGQWDITQ-----LTHPTSCVILTTAIAMKLGL 108
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDihnalLVNPTSPVIYGGLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 109 A------PFHFWFPEVLQGCSLITGLLLSTAMKFPPMTLLFM-----ASQSLNP---TLMTFMAILSAALGGWTGLNQTQ 174
Cdd:PRK06277 210 LygsglpPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVifklfGGLSYFPsaqGVLIALSVLAMVFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 175 TRKILAFSSISHLGWMAAIIT----YSPKLALLNFYLYVMITAAVFLTLNSI----KALKLSTLMTTWAKTPSLSAMLML 246
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLAlgtpLGIVAGIFHAINHVIYKSALFLGAGIVsyrtKTSNLRKLGGLLPVMPVVAFMVLC 369
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 7672621 247 TLLSLAGLPPLTGFLPKWLIIQELTKQEMIPTATIMALLSLLGLFFYLRLAY 298
Cdd:PRK06277 370 AKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFY 421
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-340 |
2.70e-08 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 49.56 E-value: 2.70e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 7672621 291 FFYLRLAYCATITLPPHTTNHMKQWHTNKPTNT-LTAILVTMSIALLPMSP 340
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTlLLPTLTTLSILLLPLTP 51
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
81-284 |
3.77e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 54.93 E-value: 3.77e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 81 TGQWDITQL-THPTSCVILTTAIAM-------KLGLAPFHFWFPEVLQGCSLITGLLLSTAM---------KFPPMtllF 143
Cdd:PRK12644 184 AGTYRLSELlADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMvkagiylvaRLAPG---F 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 144 MASQSLNPTLMTFmAILSAALGGWTGLNQTQTRKILAFSSISHLGWMAAIITY-SPKLALLNFYLYV---MITAAVFLTL 219
Cdd:PRK12644 261 ADVPVWRPTVLVL-GLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIgTRDAALAGLAMLLahaLFKAALFLVV 339
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 7672621 220 NSIKAL-------KLSTLmttWAKTPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMIPTATIMAL 284
Cdd:PRK12644 340 GIIDHStgtrdirKLSGL---GRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALEAVLHDGALGPAGPVVL 408
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
103-296 |
7.28e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 53.80 E-value: 7.28e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 103 AMKLGLAPFHFWFPEVLQG----CSLITGLLLSTAMKFPPM---TLLFMASQSLNPTLMTFMAILSAALGGWTGLNQTQT 175
Cdd:PRK07691 220 ATKAGLFPLYFWLPGSYYAppiaIAALFGALLTKVGVYAIArtfTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDI 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 176 RKILAFSSISHLGWMAAIITYSPKLALLNFYLYVM----ITAAVFLTLNSIKAL-------KLSTLMTTWaktPSLSAML 244
Cdd:PRK07691 300 KKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIhdmiVKAALFLLIGIMIKItgttdlkKMGGLIKRY---PVLGWMF 376
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 7672621 245 MLTLLSLAGLPPLTGFLPKWLIIQELTKQEMIPTATIMALLSLLGLFFYLRL 296
Cdd:PRK07691 377 FIAALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-276 |
1.34e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 53.03 E-value: 1.34e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 33 LEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASTLILFSSMTNAWDTGQWDITQLTH--PTSCVILTTAIAMKLGLAP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 111 FHFWFPEVLQGCSLITGLLLSTA-MKFPPMTLLFMASQSLNPTL-MTFMAILSAALGGWTGLNQTQTRKILAFSSISHLG 188
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVvVKAGVFPLVRCALDVPGLDLiVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQLG 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 189 WMAAiitySPKLALLNFYLYVMITAAVFLTLNSIKALKLSTLMTTWAKTpSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK07234 283 FILA----APLVGGLYALAHGLVKSTLFLCAGALPSRNFTELISQMLGI-GKWIPLTMASFSIAGFPLLAGFVSKVLTLK 357
|
....*...
gi 7672621 269 ELTKQEMI 276
Cdd:PRK07234 358 NLLPWQAI 365
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
7-298 |
3.68e-07 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 51.69 E-value: 3.68e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 7 LIFIASLLMgstITMSSNhWITAWAGLEINTLAVLPLISKSHH-PRAIEAATKYFLVQAAASTLILFSSMTNAWDTGQWD 85
Cdd:COG1009 118 LLFMAAMLG---LVLSDN-LLLLFVFWELVGLCSYLLIGFWYEkPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLN 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 86 ITQLTHPTSCVI---LTTAIAM--------KLGLAPFHFWFPEVLQGCSLITGLLLSTAM---------KFPPmtlLFMA 145
Cdd:COG1009 194 FSELLAAAPTILsspLLTLILLllllgafgKSAQFPLHFWLPDAMEGPTPVSALLHAATMvkagvyllaRLSP---LFAL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 146 SqslnPTLMTFMAILSAA---LGGWTGLNQTQTRKILAFSSISHLGWMAAIITYSpklallnfylyvMITAAVFLTLN-- 220
Cdd:COG1009 271 S----PVWLTVVAIIGAItalFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG------------AYVAALFHLLTha 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 221 SIKAL------------------KLSTLmttWAKTPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQE-LTKQEMIPTATI 281
Cdd:COG1009 335 FFKALlflgagsvihatgtrdirKMGGL---RKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAaLEAGGLGPLLLA 411
|
330
....*....|....*...
gi 7672621 282 MALL-SLLGLFFYLRLAY 298
Cdd:COG1009 412 VALLgAFLTAFYSFRLFF 429
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-267 |
2.46e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 48.96 E-value: 2.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 33 LEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASTLILFS-----SMTNAWDTGQWDITQLTHPTSCVI------LTTA 101
Cdd:PRK12662 139 LEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGigflyAITGTLNMGDMFLIIQDLPTNRAIqigvlfIMVG 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 102 IAMKLGLAPFHFWFPEVLQGC-SLITGLLLSTAMKFPPMTL-----------LFMASQSLNPTLMTFmAILSAALGGWTG 169
Cdd:PRK12662 219 LFIKAALFPFHKWLIQAYSEApSFISVFFSGTSTKVMIYLIirivydvfkanFVFTTLPFNNVFMIL-AALAIVFGSVLA 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 170 LNQTQTRKILAFSSISHLGWMAAIITYSPKLALLNFYLYV----MITAAVFLTLNSIK----ALKLSTLMTTWAKTPSLS 241
Cdd:PRK12662 298 ILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIvnhsIVKSALFMVSGSISyhfgTTKLEDCLNLWKSMPKIT 377
|
250 260
....*....|....*....|....*.
gi 7672621 242 AMLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:PRK12662 378 LAFVLLSLSLIGMPPTSGFVAKWYIL 403
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-284 |
2.53e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 49.04 E-value: 2.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 2 NPQAKLIFIASLLMGSTITMSSNhWITAWAGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASTLILFSSMTNAW-D 80
Cdd:PRK06589 115 SSRFLFFFNLTILIGVLIALSSD-LFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYtK 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 81 TGQWDITQ---LTHPTSCVILTTAIAM--KLGLAPFHFWFPEVLQG----CSLITGLLLSTAMKFPPMTLLFMASQSLNP 151
Cdd:PRK06589 194 TGNLDFVSgglFSKNQSIILLLMFIYGiaKTAIFPVHSWLPAAMVAhypvSALLHAVIVVKTGLFCIYKILLYIFGLSYL 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 152 T-------LMTFMAILSAALGGWTGLNQTQTRKILAFSSISHLGW--MAAIITYSPKLALLNFYL--YVMITAAVFLTLN 220
Cdd:PRK06589 274 QrifaefnWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLalLSAFILTPKALGAAILHLvsHSFAKICLFYSMG 353
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 7672621 221 SIKALK----LSTLMTTWAKTPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMIPTATIMAL 284
Cdd:PRK06589 354 SIYSLKkedqVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVML 421
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
105-303 |
3.86e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 48.47 E-value: 3.86e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 105 KLGLapfHFWFPEVLQGCSLITGLLLSTAMKFPPMTL------LFMASqSLNPTLMTFMAILSAALGGWTGLNQTQTRKI 178
Cdd:MTH00210 227 QLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLiirsgpLFEGS-PLALTIVTILGALTAFFAATVGVVQNDLKKV 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 179 LAFSSISHLGWMA---AIITYSPKL-ALLNfylYVMITAAVFLTLNS-IKAL-------KLSTLMTTwakTPSLSAMLML 246
Cdd:MTH00210 303 IAYSTCSQLGYMVmvcGISNYSTSLfHLMN---HAFFKALLFLSAGSvIHAVsdeqdmrKMGGLIKS---IPFTYVMILI 376
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 7672621 247 TLLSLAGLPPLTGFLPKWLIIQELTKQEMIPTATIMALLS-LLGLFFYLRLAYCATIT 303
Cdd:MTH00210 377 GSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSaLLTAFYSIRLIYLTFIT 434
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
105-268 |
4.80e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 48.42 E-value: 4.80e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 105 KLGLapfHFWFPEVLQGCSLITGLLLSTAMKFPPMTLLFMA-----SQSLNPTLMTFMAILSAALGGWTGLNQTQTRKIL 179
Cdd:MTH00032 241 QLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSfplfeKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVI 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 180 AFSSISHLGWMAAIITY--SPKLALLNFYLYVMITAAVFLTLNSI---------KALKLSTLMTTwakTPSLSAMLMLTL 248
Cdd:MTH00032 318 AYSTCSQLGYMVLIIGIegSHNVGLFHLVNHAFFKALLFLSAGSVihsttvdeqDMRKMGGLIHS---IPFTYTMMLIGS 394
|
170 180
....*....|....*....|
gi 7672621 249 LSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00032 395 FSIMGLPYLTGFYSKDLILE 414
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
8-285 |
7.61e-06 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 47.62 E-value: 7.61e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 8 IFIASLLMgstiTMSSNHWITAWAGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASTLILFSS----------MTN 77
Cdd:PRK06458 116 LFLFTMLL----ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFGTilvyanaatvMGD 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 78 AWDTGQW-DITQLTHPTSCVILTTAIAM-------KLGLAPFHFWFPEV-LQGCS----LITGLLLSTAMkFPPMTLLFM 144
Cdd:PRK06458 192 GEMAILWtELLKHASLLDPTLMKLAFVFlligfgtKVGLFPMHAWLPDAhSEAPSpvsaLLSGVLLNVAL-YAVLRYYIL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 145 ASQSLNP----TLMTFMAILSAALGGWTGLNQTQTRKILAFSSISHLGWMAAIITYSPKLA----LLNFYLYVMITAAVF 216
Cdd:PRK06458 271 IDAAIGSdfpgRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPLGifaaLLHMLNHSLTKSAIF 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 7672621 217 LTLNSIkALKLST--------LMTTwakTPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMIPTATIMALL 285
Cdd:PRK06458 351 FASGNV-LQKYGTrdinvirgLLKV---SPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAILLLLL 423
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
34-290 |
1.97e-05 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 46.18 E-value: 1.97e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 34 EINTLAVLPLISKSHHPRAIEAATKYFLVQAAASTLILFSSMTNAW--DTGQWDITQLTH---PTSCVILT-----TAIA 103
Cdd:PRK12561 117 ELELVPVYLLISIWGGQKRLYAATKFILYTALASIFILVAGLALALsgDTFTFDLAELGAksyPLALELLLyagflIAFG 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 104 MKLGLAPFHFWFPEVLQGCS-----LITGLLLSTA----MKFpPMTLLFMASQSLNPTLMTfMAILSAALGGWTGLNQTQ 174
Cdd:PRK12561 197 VKLPIFPLHTWLPDAHGEASapvsmILAGVLLKMGgyalIRF-NVQMLPDAHVYFAPALAI-LGVVNIIYGALNAFAQDN 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 175 TRKILAFSSISHLGW----MAAIITYSPKLALLNFYLYVMITAAVFL----TLNSIKALKLSTLMTTWAKTPSLSAMLML 246
Cdd:PRK12561 275 VKRRLAYSSVSHMGFvllgIAAFTDLGISGAMLQMISHGLIAAALFFltgvTYERTHTLSIPNMGGLAKVMPKTFALFTA 354
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 7672621 247 TLLSLAGLPPLTGFLPKWLIIQELTKQEMIPTA--TIMALLSLLGL 290
Cdd:PRK12561 355 SSMASLALPGMSGFVSELTVFLGITSSDVYSSTfrTITILLAAVGL 400
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
55-289 |
2.16e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 46.23 E-value: 2.16e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 55 AATKYFLVQAAASTLILFSSMTNAWDTG--QWDITQL---THPTSCVILTTA-----IAMKLGLAPFHFWFPEVLQGCS- 123
Cdd:PRK06473 158 AATKFLLYTAISGILILVSFLGLVWLSGasSFDYEPLrshTLPLSTQLLLLApilvgFGIKIPLVPFHTWLPDAHVEASt 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 124 ----LITGLLLSTA----MKFPpMTLLFMASQSLNPTLMTFmAILSAALGGWTGLNQTQTRKILAFSSISHLGWM----A 191
Cdd:PRK06473 238 pvsvLLAGVLLKLGtyglLRFG-VGLFPEAWVYLAPWLATW-AVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYIllaaA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 192 AIITYSPKLALLNFYLYVMITAAVFLTL-------NSIKALKLSTLMTTWAKTPSLSAMLMLTLLSLAGLPPLTGFLPKW 264
Cdd:PRK06473 316 AATPLSILAAVFQMISHGLISALLFLLVgvvykktGSRDVDVLRGLLNPERGLPITGSLMILGVMASAGIPGMVGFIAEF 395
|
250 260
....*....|....*....|....*
gi 7672621 265 LIIqeltkQEMIPTATIMALLSLLG 289
Cdd:PRK06473 396 LVF-----RGSFPIFPVQTLLCMIG 415
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
95-316 |
2.37e-05 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 46.22 E-value: 2.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 95 CVILTTAIAMKLGLAPFHFWFPEVLQGCSLITGLLLSTAMKFPPMTLLFMAS-----QSLNPTLMTFMAILSAALGGWTG 169
Cdd:MTH00020 213 CLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSplfeqAPLALIIVTIVGSLTVFFAATVG 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 170 LNQTQTRKILAFSSISHLGWMAAIITYSP-KLALLNFYLYVMITAAVFLTLNS-IKAL-------KLSTLMTTwakTPSL 240
Cdd:MTH00020 293 LVQNDLKKVIAYSTCSQLGYMVVACGLSHySISLFHLMNHAFFKALLFLSAGSvIHALsdeqdmrKMGGLISF---LPLT 369
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 7672621 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMIPTATIMALLS-LLGLFFYLRLAYCATITLPPHTTNHMKQWH 316
Cdd:MTH00020 370 YIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSaLLTAFYSIRLIYLTFLSNTNLKKAVFFHLH 446
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
110-289 |
3.06e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 45.68 E-value: 3.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 110 PFHFWFPEVLQGCSLITGLLLSTAMKFPPMTLLfmasQSLNP---------TLMTFMAILSAALGGWTGLNQTQTRKILA 180
Cdd:PRK12647 213 PFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLL----ARLNPvlggtplwqTILPLFGGLTMLTGALLAVRQTDLKLILA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 181 FSSISHLGWMAAIITYSPKLALLNFYLYVMI----TAAVFLTLNSIK-------ALKLSTLmttWAKTPSLSAMLMLTLL 249
Cdd:PRK12647 289 YSTVSALGTLVMLLGLGSELAIKAAVLFLVAhslyKGALFMVAGIIDhetgtrdITKLGGL---RRAMPITAAAALLAAL 365
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 7672621 250 SLAGLPPLTGFLPKWLIIQELTkqEMIPTATIMALLSLLG 289
Cdd:PRK12647 366 SMAGLPPLFGFLAKELIYEALL--EAPLWSLILTVAAVLG 403
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
6-295 |
3.15e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 45.52 E-value: 3.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 6 KLIFIASLLMGSTITMS--SNHWITAWAGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAA------STLILFSSMTN 77
Cdd:PRK08676 102 KVFYLGFNLLLSVITFAffSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQ 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 78 AWDTGQWDITQLTHPT----------SCVILTTAIAMKLGLAPFHFWFPEV-LQGCSLITGLLLSTAMKFPPMTLLFM-- 144
Cdd:PRK08676 182 ALGTGTLNWTELAAHAsllspsvlgaSFLFIFIGFLAKSGLVPFHTWLPAAyAKAPSVVSALLSGTVLNIGIYGILRLsa 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 145 ------ASQSLNPTLMTFmAILSAALGGWTGLNQTQTRKILAFSSISHLGWMAAIITYSPKLALLNFYLYVMITAAVFLT 218
Cdd:PRK08676 262 llrqsgAAEQFSNVLIGL-GIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSG 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 219 L--------NSIKALKLSTLMTTWAKTPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMIPTATIMALLSLLG- 289
Cdd:PRK08676 341 LffsagilhRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAAs 420
|
....*...
gi 7672621 290 --LFFYLR 295
Cdd:PRK08676 421 sfAIFLLK 428
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
13-263 |
3.67e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 45.59 E-value: 3.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 13 LLMGSTITMS-SNHWITAWAGLEINTLAVLPLISK-SHHPRAIEAATKYFLVQAAASTLILFSSMTNAWDTGQWDITQLT 90
Cdd:PRK12649 119 LFMGSMIGMVfSGNTIQLFIFWELTSITSFMLIGYwRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATIL 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 91 HPTSCV--------ILTTAIAMKLGLA------PFHFWFPEVLQGCSLITGLLLSTAMKFPPMTLLFMASQSLNPT---- 152
Cdd:PRK12649 199 QDSELIenikghplFLITLILIFIGAAaksaqgPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawf 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 153 -LMTFMAILSAALGGWTGLNQTQTRKILAFSSISHLGWMAAIITYSPK------LALLNFYL--YVMITAAVFLtLNSIK 223
Cdd:PRK12649 279 iLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTYhepglgVAAATFHLlnHATFKACLFL-VAGIV 357
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 7672621 224 ALKLST-----LMTTWAKTPSLSAMLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12649 358 AHEAATrdirkLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSK 402
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
110-277 |
4.05e-05 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 45.52 E-value: 4.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 110 PFHFWFPEVLQGCSLITGLLLSTAMKFPPMTLLFMASQSLNPT-----LMTFMAILSAALGGWTGLNQTQTRKILAFSSI 184
Cdd:PRK12646 228 PFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSnmyiyIVTFVGLITMLFGSITALKQWDLKGILAYSTI 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 185 SHLGWMAAII------TYSPKLALLNFYLYVMITA------------AVFLTLNSIK----ALKLSTLMTTWAKTPSLSA 242
Cdd:PRK12646 308 SQLGMIMAMVgigggyAQHQQDAIASIYVFVLFAAlfhlmnhaifkcALFMGVGIIDheagTRDIRILSGMRQLFPKMNL 387
|
170 180 190
....*....|....*....|....*....|....*
gi 7672621 243 MLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMIP 277
Cdd:PRK12646 388 VMTIAALSMAGVPFLNGFLSKEMFLDALTQTGQLS 422
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
82-268 |
4.08e-05 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 45.14 E-value: 4.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 82 GQWDITQL--THPTSCVILTTAIA--MKLGLAPFHFWFPEVLQGCSLITGLLLSTAMKFPPMTLL-----FMASQSLNPT 152
Cdd:MTH00207 165 GHWSITNMwqTDMNNYIALSIMIAamTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLirfypFLSSTYWFNP 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 153 LMTFMAILSAALGGWTGLNQTQTRKILAFSSISHLG-WMAAIITYSPKLALLNFYLYVMITAAVFLTLNSI-----KALK 226
Cdd:MTH00207 245 ALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGvMMASLGLGMPKLALFHLITHALFKALLFVCAGSLihshhHSQD 324
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 7672621 227 LSTLMTTWAKTPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00207 325 LRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILE 366
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
55-296 |
1.40e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 43.55 E-value: 1.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 55 AATKYFLVQAAASTLILFSSMTNAWDTGQWD------ITQLTHPTSCVILTTAI----AMKLGLAPFHFWFPEVLQGCSL 124
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSfdydaiSTQNLSLNTQLILLTGLllgfGIKIPLVPLHTWLPDAYTEASP 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 125 ITGLLLSTAM-KFPPMTLLFMASQ-------SLNPTLMTFMAIlSAALGGWTGLNQTQTRKILAFSSISHLGW------- 189
Cdd:PRK07363 238 AVAILLGGVLaKLGTYGLLRFGLQlfpqtwsLVAPGLAIIGTI-SVIYGALSAIAQKDIKRMVAYSSIGHMGYilvaaaa 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 190 ---------MAAIITYSPKLALLnFYLYVMITAAVfltlNSIKALKLSTLMTTWAKTPSLSAMLMLTLLSLAGLPPLTGF 260
Cdd:PRK07363 317 gtqlsllgaVAQMISHGLILALL-FHLVGIVERKV----GTRDLDVLNGLMNPIRGLPLTSALLVLAGMASAGIPGLVGF 391
|
250 260 270
....*....|....*....|....*....|....*.
gi 7672621 261 LPKWLIIQELTKQEMIPTATIMALLSLLGLFFYLRL 296
Cdd:PRK07363 392 VAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILL 427
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-267 |
1.81e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 43.37 E-value: 1.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 101 AIAMKLGLAPFHFWFPEV-----LQGCSLITGLLLSTA------MKFPpmtLLFMASQSLNPTLMTfMAILSAALGGWTG 169
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAhveapVAGSVLLAGILLKLGgyglvrLSWP---ILPLGAQNLAPAVIA-MGIVGIVYGSFAT 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 170 LNQTQTRKILAFSSISHLGwMAAIITYSPKLALLNFYLYVM----ITAAVFLTLNSIKALKLSTLMTTWAKTPSLS---- 241
Cdd:MTH00226 315 CRQIDVKRLVAYSSVAHMG-LVSITLVTHDIIGLTGSIFIMlahgIVSSLLFILVTILYDRHHTRLIKYYRGLSITmpiw 393
|
170 180
....*....|....*....|....*..
gi 7672621 242 -AMLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00226 394 gTIMIVTSLANVAVPPSGNFIGEYLSI 420
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-267 |
3.49e-04 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 42.11 E-value: 3.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 50 PRAIEAATKYFLVQAAASTLILFSSMT----NAWDTGQWDITQLTHPTSCVILTT--------AIAMKLGLAPFHFWFPE 117
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAIIYlvvvYYNATGTFDIADLLNLPLPPGVQYwlflaffiAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 118 VLQ-----GCSLITGLLLSTA----MKFPpMTLLFMASQSLNPTLMTFmAILSAALGGWTGLNQTQTRKILAFSSISHLG 188
Cdd:PRK05846 237 AHVqaptaGSVLLAGILLKMGayglLRFS-LPLFPDASHEFAPIIITL-GVIAIIYGALVALAQTDIKKLIAYSSISHMG 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 189 WMAAIITYSPKLALLNFYLYVM----ITAAVFLTLNSIKALKLSTLMTT----WAKTPSLSAMLMLTLLSLAGLPPLTGF 260
Cdd:PRK05846 315 FVTLGIFAGNQLGIQGAIFQMIshglSSAALFLLVGVLYDRLHTRDIADygglAKVMPVLAAFFLFFAMASLGLPGTSGF 394
|
....*..
gi 7672621 261 LPKWLII 267
Cdd:PRK05846 395 VGEFLIL 401
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
96-268 |
4.13e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 41.88 E-value: 4.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 96 VILTTAIAMKLGLAPFHFWFPEVL-QGCSLIT----GLLlsTAMKFPPM----TLLFmASQSLNPTLMtFMAILSAALGG 166
Cdd:PRK12665 213 AVLLVAFGIKAAVFPLSFWLPDSYpTAPAPVTavfaGLL--TKVGVYAIirthTLLF-PGGGLDTLLM-VVALLTMVVGI 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 167 WTGLNQTQTRKILAFSSISHLGWMAAIITYSPKLALLNFYLYV----MITAAVFLTLNSIK----ALKLSTLMTTWAKTP 238
Cdd:PRK12665 289 LGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVahhiTVQTTLFLVVGLIErqagSSSLRRLGGLAKASP 368
|
170 180 190
....*....|....*....|....*....|
gi 7672621 239 SLSAMLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK12665 369 LLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK06591 |
PRK06591 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-296 |
7.34e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235837 [Multi-domain] Cd Length: 432 Bit Score: 41.31 E-value: 7.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 1 MNPQAKLIFIASLL---MGSTITMSSNHWITAWAGLEINTLAVLPLISKSHHPRAIEAATKYFLVQAAASTLILFSSMTN 77
Cdd:PRK06591 109 INNNRKSLFYGILLfahTGYLGMIATNDFFNLYVFIEISALSSYVLIASGNNPKSLIGAFDYLIMGSIGATLILIAIGFL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 78 AWDTGQWDITQ----LTHPTSCVILTTAIA-------MKLGLAPFHFWFPEV-----------LQGCSLITGLLLstAMK 135
Cdd:PRK06591 189 LSITGSLNMTDiaayLQEHTNSRIITIAIGffligaiLKTAFFPMHFWMMRAynntasvilvyLAGISTIIGIYI--IYK 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 136 FPPMTLLFMASQSLNPTLMTFMAILSAALGGWTGLNQTQTRKILAFSSISHLGWMaaiityspklallnFYLYV----MI 211
Cdd:PRK06591 267 FTYIIIGYETIKTAITNFIRPIALATLIIAPYFAYQAKNFKNIIIYSCFTQIGYV--------------FLLYVtengII 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 212 TAAVFLTLNSIK--ALKLSTLMTTWAKTPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMIPTATIMALLSLLG 289
Cdd:PRK06591 333 ILPSLLLADSINkiALFLIDAYNESYKREPNKVLIIIAIICSCGLPISPLFFIKVNILELLLTQNLLLDFIIILLSSVGS 412
|
....*..
gi 7672621 290 LFFYLRL 296
Cdd:PRK06591 413 LFYHYKM 419
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
59-270 |
9.77e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 40.87 E-value: 9.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 59 YFLVQAAASTLILFSSMTNAW-DTGQWDITQLTHPT-----SCVILTTAIAMKLGLAPFHFWFPEVLQGC-----SLITG 127
Cdd:PRK08667 166 FYFVMTQLSTVFLMLGIIVLFiQTGSFELSPLGASAgilslVFLLLFLGFGIKAGIIPFHKWLPYAHPASpsnvsALMSG 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 128 LLLSTAM-KFPPMTLLFMASQSLNPTLMTFMAILSAALGGWTGLNQTQTRKILAFSSISHLG--------WMAAIITYSP 198
Cdd:PRK08667 246 VMLKVAVyGLVRFLMDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGiilmgiglYVIFGVYGLD 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 199 KLALLNfylyvmITAAVFLTLNsiKALKLSTLMTTWA-------------------KTPSLSAMLMLTLLSLAGLPPLTG 259
Cdd:PRK08667 326 TLALLA------LGGALFHSLN--HALFKSLLFLTAGsvvhatgtrniekmgglvkLMPYTSALFLVGAVSIAALPPFNG 397
|
250
....*....|.
gi 7672621 260 FLPKWLIIQEL 270
Cdd:PRK08667 398 FASELLLYESF 408
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
33-267 |
1.70e-03 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 39.96 E-value: 1.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 33 LEINTLAVLPLISKSHHPRAIEAATKYFLVQAAAS------TLILFSSMTNAWDTGQWDITQLTHPTSCVILTTAIAMKL 106
Cdd:PRK06525 142 FEITGLCSWALISYYQSPKALRSALKALLITHIGSlglylaAATLFLQTGTFALSALSGLHGSLKYLVFLGILFAAWGKS 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 107 GLAPFHFWFPEVLQGCSLITGLLLSTAMKFPPMTLLFMASQSLNP------TLMTFMAILSAALGGWTGLNQTQTRKILA 180
Cdd:PRK06525 222 AQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPiphvigYVGAVMAIVTLLYGFLMYLPQQDMKRLLA 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 181 FSSISHLGWMAAIITYS---PKLALLNFYLYVMITAAV----FLTLNSIK----ALKLSTLMTTWAKTPSLSAMLMLTLL 249
Cdd:PRK06525 302 YSTITQLGYMFFGLSLAilgSRLALEGSIAYIFNHAFAkslfFLVAGALSyscgTRLLPRLRGVLKKLPLVGVGFCVAAL 381
|
250
....*....|....*...
gi 7672621 250 SLAGLPPLTGFLPKWLII 267
Cdd:PRK06525 382 AITGVPPFNGFFSKFPIF 399
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
153-298 |
3.37e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 39.24 E-value: 3.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 7672621 153 LMTFMAILSAALGGWTGLNQTQTRKILAFSSISHLGWMAAIITY-SPKLALLNFYLYVMITAAVFLTLNSI-----KALK 226
Cdd:MTH00209 241 SLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLnQPELAFFHLITHALFKALLFICAGNIihshgHSQD 320
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 7672621 227 LSTLMTTWAKTPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMIPTATIMALLSL-LGLFFYLRLAY 298
Cdd:MTH00209 321 IRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTsLTAAYSMRLSY 393
|
|
| |
