|
Name |
Accession |
Description |
Interval |
E-value |
| PRK08026 |
PRK08026 |
FliC/FljB family flagellin; |
1-554 |
0e+00 |
|
FliC/FljB family flagellin;
Pssm-ID: 236140 [Multi-domain] Cd Length: 529 Bit Score: 621.38 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 1 MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEG 80
Cdd:PRK08026 1 MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 81 ALSEINNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLSKDGSMKIQVGANDGETITIDL 160
Cdd:PRK08026 81 ALSEINNNLQRVRELTVQAATGTNSQSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLAKDGSMKIQVGANDGETITIDL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 161 KKIDSDTLNLAGFNVNGEGETANTAATLKDMVGLKLDNTGVTTagvNRYIADKAVASSTDILNAVAgvDGSKVSTEAdvg 240
Cdd:PRK08026 161 KKIDSDTLGLDGFNVNGKGTVANTAATVSDLTAAGATLDTTGL---YDVKTKNAALTTADALAKLG--DGDKVTATA--- 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 241 fgaaapgTPVEYTYHKDTNTYTasasvdATQLAAFLNPEAGGTTAATVSIGNGTtaqeQKVIIAKDGSLTAadDGAALYL 320
Cdd:PRK08026 233 -------TGGDYTYNAKSGKYQ------AADLAATLTPDVGGTAGASYTIKDGT----YEVNVDSDGKITL--GGSALYI 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 321 DDTGNLSKTNAGTDTQAKLSDLMANNANaktvittdkgtftanttkfdgvdisvDASTFANAVKNETYTATVGVTLPATY 400
Cdd:PRK08026 294 DATGNLTTNNAGAATKATLDALKKTASE--------------------------GAATAKAALAAAGVTVADGVTAKTVK 347
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 401 TVNNGTaASAYLVDGKVSKTPAEYFAQADGTITSGENAATS-----------------------------KAIYVSANGN 451
Cdd:PRK08026 348 MSYTDK-NGKVIDGGYAVKTGDDYYAADYDEITGAISATTTyytakdgttktaanklggadgktevvtidGKTYVASDGK 426
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 452 LTTNTTSESEATTNPLAALDDAIASIDKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQ 531
Cdd:PRK08026 427 QTTLAEAAATTTENPLAALDAAIASIDKFRSSLGAVQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQ 506
|
570 580
....*....|....*....|...
gi 9211052 532 QAGNSVLAKANQVPQQVLSLQQG 554
Cdd:PRK08026 507 QAGNSVLAKANQVPQQVLSLLQG 529
|
|
| PRK06819 |
PRK06819 |
FliC/FljB family flagellin; |
1-551 |
2.30e-124 |
|
FliC/FljB family flagellin;
Pssm-ID: 235867 [Multi-domain] Cd Length: 376 Bit Score: 369.88 E-value: 2.30e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 1 MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEG 80
Cdd:PRK06819 1 MAAVINTNSLSLLTQNNLNKSQSSLGTAIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISIAQTTEG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 81 ALSEINNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLSKDGSMKIQVGANDGETITIDL 160
Cdd:PRK06819 81 ALNEINNNLQRVRELTVQAQNGSNSSSDLDSIQDEISQRLAEIDRVSDQTQFNGVKVLAEDTTMSIQVGANDGETIDINL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 161 KKIDSDTLNLAGFNVNGEGETANTAATLKDMVGLKLDNTGVTTAGvnrYIADKAVASSTDILNAVAGVDGSKVSTEADVg 240
Cdd:PRK06819 161 QKIDSKSLGLGSFSVSGVSGALTSLTFTDTALDTSVTGVTTTTAL---DFSDISTFAKGATVHGIGDVGTDGAYADGYV- 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 241 fgaaapgtpveytyhkdtntytasasvdatqlaaflnpeaggttaatvsigngttaqeqkviiakdgsltaaddgaalyL 320
Cdd:PRK06819 237 -------------------------------------------------------------------------------I 237
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 321 DDTGNLSKTNAGTDTQAKLSDLMANNANAKTVITtdkGTFTANTTKFDGVdisvdastfanavknetytatvgvtlpaty 400
Cdd:PRK06819 238 RTTDGKQYKGEVDATNGKVTFADDANGDPITDAT---KLEAAAQFSPAGK------------------------------ 284
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 401 tvnngtaasaylvdgkvsktpaeyfaqadgtitsgenaatskaiyvsangnlttnttseseATTNPLAALDDAIASIDKF 480
Cdd:PRK06819 285 -------------------------------------------------------------ATASPLETLDDALKQVDGL 303
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 9211052 481 RSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSL 551
Cdd:PRK06819 304 RSSLGAVQNRFESTVTNLNNTVTNLSSARSRIEDADYATEVSNMSRAQILQQAGTSVLAQANQVPQTVLSL 374
|
|
| PRK08869 |
PRK08869 |
polar flagellin E; |
2-553 |
1.68e-74 |
|
polar flagellin E;
Pssm-ID: 236344 [Multi-domain] Cd Length: 376 Bit Score: 241.37 E-value: 1.68e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 2 AQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGA 81
Cdd:PRK08869 1 AVNVNTNVSAMTAQRNLNGATSALSQSMERLSSGKRINSAKDDAAGLQISNRLTTQIRGLDVAVRNANDGISIAQTAEGA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 82 LSEINNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLSKD-GSMKIQVGANDGETITIDL 160
Cdd:PRK08869 81 MNETTNILQRMRDLSLQSANGSNSASDRQALQEEVTALNDELNRIAETTSFGGTKLLNGSfGTKSFQIGANSGEAVSLDL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 161 KKIDSDTLNLAGFNVNGEGETANTAATLKDMVGLKLDNTGVttAGVNRYIADKAVASStdilnavagvdgskvsteadvg 240
Cdd:PRK08869 161 KSMRSDAKIMGGVSYDAEGGADKDWTVGAGNTDLNVSFDDK--GGETQAITINAKAGD---------------------- 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 241 fgaaapgtpveytyhkdtntytasasvDATQLAAFLNPEAGGTTAAtvsigngttaqeqkviIAKDGSLTaaddgaalyl 320
Cdd:PRK08869 217 ---------------------------DIEELATYINGQTDGVGAS----------------VSEDGKLQ---------- 243
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 321 ddtgnlsktnagtdtqaklsdlmannanaktvittdkgTFTANTTKFDGVDISvdastfanavknetytatvgvtlpaty 400
Cdd:PRK08869 244 --------------------------------------LFAAGQKVSGGVSFS--------------------------- 258
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 401 tvnngtaasaylvdgkvsktpaeyfaqadGTITSGENAATSKAIYVSaNGNLTTNTTSEseattNPLAALDDAIASIDKF 480
Cdd:PRK08869 259 -----------------------------GGLAAELGLGNATAVTVD-DLDISTVGGAQ-----QAVAVIDAALKYVDSH 303
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 9211052 481 RSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLQQ 553
Cdd:PRK08869 304 RADLGAFQNRFTHAINNLQNISENLSASNSRIKDTDFAKETTELTKAQILQQAGTSILAQAKQAPQSALSLLQ 376
|
|
| PRK12806 |
PRK12806 |
flagellin; Provisional |
1-553 |
2.72e-51 |
|
flagellin; Provisional
Pssm-ID: 183761 [Multi-domain] Cd Length: 475 Bit Score: 182.58 E-value: 2.72e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 1 MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEG 80
Cdd:PRK12806 1 MAQVINTNVASLTAQRNLGVSGNMMQTSIQRLSSGLRINSAKDDAAGLAISQRMTAQIRGMNQAVRNANDGISLAQVAEG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 81 ALSEINNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLSKDGSMKI-QVGANDGETITID 159
Cdd:PRK12806 81 AMQETTNILQRMRELSVQAANSTNNSSDRASIQSEISQLKSELERIAQNTEFNGQRILDGSFSGASfQVGANSNQTINFS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 160 LKKIDSDTLNLAGFNVNGEGETANTAATLKDMVGLKLDNTGVTtagvnryiadkavASSTDILNAVAGVDGSKVSTeadv 239
Cdd:PRK12806 161 IGSIKASSIGGIATATGTEVAGAAATDITIAIGGGAATSINSS-------------ANFTGALNGQDATSAYAKAA---- 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 240 GFGAAApgtpveytyhkdTNTYTASASVDATQLAAFLNPEAGGTTAATVSigngttaqeqKVIIAKDGSLTAADDGAAly 319
Cdd:PRK12806 224 AINDAG------------IGGLSVTASTSGTQAVGAIGGTAGDTYNLTIN----------GVAIYTNLDVATALTNSD-- 279
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 320 LDDTGNLSKTNAGTDTQAKLSDLMANNANAKTVITTDKGtfTANTTKFDGVdiSVDASTFANAVKnetytatvgvtlpat 399
Cdd:PRK12806 280 LRDAINGVSNQTGVVASLNGGNMTLTAADGRNITVTESG--TGFTAGTDGL--TVTGGAFDGALR--------------- 340
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 400 ytvnngtaasaylvdGKVSKTPAEYFAQADGTITSGENAATSKAIYvsangNLTTNTTSESEATTNPLAALDDAIASIDK 479
Cdd:PRK12806 341 ---------------GTLSISAVDTIAIGGTVANIGLSANISKDTV-----GIDSLDVSTASGAQTAIKRIDAALNSVNS 400
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 9211052 480 FRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLQQ 553
Cdd:PRK12806 401 NRANMGALQNRFESTIANLQNVSDNLSAARSRIQDADYAAEMASLTKNQILQQAGTAMLAQANSLPQSVLSLLG 474
|
|
| PRK12802 |
PRK12802 |
flagellin; Provisional |
1-187 |
1.12e-45 |
|
flagellin; Provisional
Pssm-ID: 139237 [Multi-domain] Cd Length: 282 Bit Score: 161.97 E-value: 1.12e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 1 MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEG 80
Cdd:PRK12802 1 MALTVNTNITSLTVQKNLSRASDALSTSMTRLSSGLKINSAKDDAAGLQIATRQTSQIRGQTQAIKNANDGISIAQTAEG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 81 ALSEINNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLSKD-GSMKIQVGANDGETITID 159
Cdd:PRK12802 81 ALQESTNILQRMRELAVQSRNDSNDSTDRAALNKEFTTMLDEITRIATSTTLNGKNLLDGSaGTMTFQVGANTGQSNQIT 160
|
170 180
....*....|....*....|....*...
gi 9211052 160 LKKIDSDTLNLAGFNVNGEGETANTAAT 187
Cdd:PRK12802 161 FGLSASFDATGLGVGSGTLITGADSAAA 188
|
|
| FlgL |
COG1344 |
Flagellin and related hook-associated protein FlgL [Cell motility]; |
5-165 |
4.45e-42 |
|
Flagellin and related hook-associated protein FlgL [Cell motility];
Pssm-ID: 440955 [Multi-domain] Cd Length: 245 Bit Score: 151.17 E-value: 4.45e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 5 INTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGALSE 84
Cdd:COG1344 3 ISTNMSALNALRNLNRTQSDLAKLQEQLSSGKRINSASDDPAGAAIALRLRSQIRGLEQYQRNANDAISRLQTAEGALGE 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 85 INNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLS--KDGSMKIQV-GANDGETITIDLK 161
Cdd:COG1344 83 ITDILQRARELAVQAANGTLSDEDRAAIAAELEQLLDQLLSIANTTDFNGRYLFAgtATDTPPFQVdYQGDAGQRTAALG 162
|
....
gi 9211052 162 KIDS 165
Cdd:COG1344 163 ALDA 166
|
|
| Flagellin_N |
pfam00669 |
Bacterial flagellin N-terminal helical region; Flagellins polymerize to form bacterial ... |
5-139 |
1.12e-38 |
|
Bacterial flagellin N-terminal helical region; Flagellins polymerize to form bacterial flagella. This family includes flagellins and hook associated protein 3. Structurally this family forms an extended helix that interacts with pfam00700.
Pssm-ID: 425809 [Multi-domain] Cd Length: 139 Bit Score: 138.24 E-value: 1.12e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 5 INTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGALSE 84
Cdd:pfam00669 1 INTNSAALAARSNLNKNQAELSKAQERLSTGLRINSALDDAAGLAISVSLRAQIAGLSQAVRNNSLGIGRLQTAQGALSE 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 9211052 85 INNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLS 139
Cdd:pfam00669 81 VTDILQRMKELAVQASNGGNSDIDRASIQAEIQQLTDELNNIANTTSFNGEYLLA 135
|
|
| PRK12808 |
PRK12808 |
flagellin; Provisional |
5-553 |
5.26e-37 |
|
flagellin; Provisional
Pssm-ID: 237212 [Multi-domain] Cd Length: 476 Bit Score: 143.17 E-value: 5.26e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 5 INTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGALSE 84
Cdd:PRK12808 3 INTNINSMRTQEYMRQNQAKMSNAMDRLSSGKRINNASDDAAGLAIATRMRARESGLGVAANNTQDGMSLIRTADSAMNS 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 85 INNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLSKDGSMKIQV--GANDGETITIDLKk 162
Cdd:PRK12808 83 VSNILLRMRDIANQSANGTNTDKNQAALQKEFAELQKQITYIADNTQFNDKNLLNSNSSINIQTldSSDGDKQIGIDLK- 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 163 idsdtlnlagfnvngegetantAATLKdmvGLKLDNTGVTTAGVNRYIADKAVASSTDILnavagvdgSKVSTEADVGFG 242
Cdd:PRK12808 162 ----------------------SATLE---ALGINDLSIGANTDIEAVSTKIAALDKNTI--------AKATVEAKAAFD 208
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 243 AAAPGTPVEYTYHKDTNTYTAS------ASVDATQLAAFLNPEAGGTTAATVSIGNGTTAQEQKVIIAKDGSLTAADDGA 316
Cdd:PRK12808 209 KAKDDTKAEDSNILDAAADGFKdgkaddAAKDVEAIKTALSAFTGAATLEEAEAAKTAFEVAQKDLVDTYTKKAALTKDA 288
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 317 ALYLddtgnlsktnagtdtqaklsdlmannanaktviTTDKGTFTANTTKFDGVDisvdasTFANAVKNETYTATVGVTL 396
Cdd:PRK12808 289 VADL---------------------------------DTAKTTSTRSKAAKDLVA------AYDKAKSGAKPNDVAKAYL 329
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 397 PATYTVNNGTAAsaylVDGKVSKTPAEYFAQADGTITsgenaATSKAIyVSANGNLTTNTTSESEATTNPLAALDDAIAS 476
Cdd:PRK12808 330 EAKMAYEKDNNA----IDGKSKLEAADDALEKDAIKT-----DASKVL-VPKLEAAKKATTNSKADSLDAVKAIDEALKT 399
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 9211052 477 IDKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLQQ 553
Cdd:PRK12808 400 VADNRATLGATLNRLDFNVNNLKSQSSSMASAASQIEDADMAKEMSEMTKFKILNEAGISMLSQANQTPQMVSKLLQ 476
|
|
| PRK12804 |
PRK12804 |
flagellin; Provisional |
5-205 |
9.75e-36 |
|
flagellin; Provisional
Pssm-ID: 183759 [Multi-domain] Cd Length: 301 Bit Score: 135.51 E-value: 9.75e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 5 INTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGALSE 84
Cdd:PRK12804 3 INHNIAALNTLNRLSANNGASQKNMEKLSSGLKINRAGDDAAGLAISEKMRGQIRGLEMASKNAQDGISLIQTAEGALTE 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 85 INNNLQRIRELTVQA-TTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLSKD----------GSMKIQVGANDG 153
Cdd:PRK12804 83 THSILQRVRELVVQAgNTGTQDGTDLGAIQDEIKALVDEIDGISDRTEFNGKKLLDGTfkpaapaagtKSLTFQIGANAA 162
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 9211052 154 ETITIDLKKIDSDTLnlagfNVNGEGETANTAATLKDMVGLKLDNTGVTTAG 205
Cdd:PRK12804 163 QQLSVNIEAMSADAL-----GVKDTDGTLVTGKSVSDIDVTKFANAAAAADG 209
|
|
| PRK12584 |
PRK12584 |
flagellin A; Reviewed |
1-553 |
5.23e-32 |
|
flagellin A; Reviewed
Pssm-ID: 237146 [Multi-domain] Cd Length: 510 Bit Score: 129.26 E-value: 5.23e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 1 MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEG 80
Cdd:PRK12584 1 MAFQVNTNINALNAHVQSALTQNALKTSLEKLSSGLRINKAADDASGMTIADSLRSQASSLGQAIANTNDGMGIIQVADK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 81 ALSEINNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLSKDGSMK-IQVGANDGETItid 159
Cdd:PRK12584 81 AMDEQLKILDTIKVKATQAAQDGQTTESRKAIQSDIVRLIQGLDNIGNTTTYNGQALLSGQFTNKeFQVGAYSNQSI--- 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 160 lkkidsdtlnlagfnvngegeTANTAATLKDMVGL-KLDNTGVTTAGVNRYIADKAVASSTDIlnavaGVDGSKVSTEAD 238
Cdd:PRK12584 158 ---------------------KASIGSTTSDKIGQvRIATGALITASGDISLTFKQVDGVNDV-----TLESVKVSSSAG 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 239 VGFGAAAPgtpvEYTYHKDTNTYTASASVDATQLAAFLNPEAGGTTAATVSIGNGTTAQEQKviiaKDGSLTAA------ 312
Cdd:PRK12584 212 TGIGVLAE----VINKNSDRTGVKAYASVITTSDVAVQSGSLSNLTLNGIHIGNIADIKKND----SDGRLVAAinavts 283
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 313 DDGAALYLDDTGNLS---------KTNAGTDTQAKLSDLMANNANAKTVITTDKGTFTanTTKFDGVDISVDASTFANAV 383
Cdd:PRK12584 284 ETGVEAYTDQKGRLNlrsidgrgiEIKTDSVSNGPSALTMVNGGQDLTKGSTNYGRLS--LTRLDARDINVVSASDSQHL 361
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 384 K------NETYTATVGVTLPATYTVNNGTAASAylvdgkvsktpaeyfaqadgtitSGENAatsKAIYVSANGNLTTNTT 457
Cdd:PRK12584 362 GfsaigfGESQVAETTVNLRDVTGNFNANVKSA-----------------------SGANY---NAVIASGNQSLGSGVT 415
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 458 SESEATTNPLAAlDDAIASIDKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSV 537
Cdd:PRK12584 416 TLRGAMVVMDIA-ESAMKMLDKVRSDLGSVQNQMISTVNNISITQVNVKAAESQIRDVDFAEESANFNKNNILAQSGSYA 494
|
570
....*....|....*.
gi 9211052 538 LAKANQVPQQVLSLQQ 553
Cdd:PRK12584 495 MSQANTVQQNILRLLT 510
|
|
| PRK13588 |
PRK13588 |
flagellin B; Provisional |
1-553 |
8.41e-31 |
|
flagellin B; Provisional
Pssm-ID: 237440 [Multi-domain] Cd Length: 514 Bit Score: 125.75 E-value: 8.41e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 1 MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEG 80
Cdd:PRK13588 1 MSFRINTNIAALNAHAVGVQNNRDLSSSLEKLSSGLRINKAADDASGMAIADSLRSQSANLGQAIRNANDAIGMVQTADK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 81 ALSEINNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLSKDGSMK-IQVGANDGETITID 159
Cdd:PRK13588 81 AMDEQIKILDTIKTKAVQAAQDGQTLESRRALQSDIQRLLEELDNIANTTSFNGQQMLSGSFSNKeFQIGAYSNTTVKAS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 160 LKKIDSDTLNLAGF---NVNGEGETANTAATLKDMVGLKLDNTGvttaGVNRYiadkavasstdilnavaGVDGSKVSTE 236
Cdd:PRK13588 161 IGATSSDKIGHVRMetsSFSGEGMLASAAAQNLTEVGLNFKQVD----GVNDY-----------------KIETVRISTS 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 237 ADVGFGAAAPgtpvEYTYHKDTNTYTASASVDATQLAAFLNPEAGGTTAATVSIGNGTTAQEQKVIIAKDGSLTAADD-- 314
Cdd:PRK13588 220 AGTGIGALSE----IINRFSDTLGVRASYNVMATGGTPVQSGTVRELTINGVEIGTVNDVHKNDADGRLINAINSVKDrt 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 315 GAALYLDDTGNLSKTNAGTDTQAKLSDLMANNANAKTVITTDKGTFTA-----NTTKFDGVDISVDASTFANAvknetyt 389
Cdd:PRK13588 296 GVEASLDIQGRINLTSIDGRAISVHAASASGQVFGGGNFAGISGTQHAvvgrlTLTRTDARDIIVSGVNFSHV------- 368
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 390 atvgvtlpATYTVNNGTAASAYLVDGKvsktpaeyfAQADGTITSGENAATSKAIYVSANGNLTTNTTSESEATTnPLAA 469
Cdd:PRK13588 369 --------GFHSAQGVAEYTVNLRAVR---------GIFDANVASAAGANANGAQAETNSQGIGAGVTSLKGAMI-VMDM 430
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 470 LDDAIASIDKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVL 549
Cdd:PRK13588 431 AESARTQLDKIRSDMGSVQMQLVSTINNISVTQVNVKAAESQIRDVDFAEESANFSKYNILAQSGSFAMAQANAVQQNVL 510
|
....
gi 9211052 550 SLQQ 553
Cdd:PRK13588 511 RLLQ 514
|
|
| lat_flg_LafA_2 |
NF038071 |
lateral flagellin LafA; |
1-210 |
7.56e-30 |
|
lateral flagellin LafA;
Pssm-ID: 468331 [Multi-domain] Cd Length: 283 Bit Score: 118.79 E-value: 7.56e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 1 MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEG 80
Cdd:NF038071 1 MGLSIHTNYASLVTQNQLNSTNKMLGTAMQRLGTGLRINSAADDAAGLQMATRLQAQSNGQKVGMRNAQDAISMMQTAEG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 81 ALSEINNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLSKDG----SMKIQVGANDGETI 156
Cdd:NF038071 81 AMDEMTNITQRMKDLATQSANGTASAADRAAMDAEFKELSAELDNIMDNTTFGGQKLLKDGGkfeaAVTFQIGGSSAEKL 160
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 9211052 157 TID----LKKIDSDTLNLAGFNVNGEGETANTAATLKDMVGLKLDNTGVTTAGVNRYI 210
Cdd:NF038071 161 DVDasanVQKVNAEVVGTEKDVTAGIGTQAKAASAAITKLDTLLGDIGAVRSQFGANI 218
|
|
| PRK08411 |
PRK08411 |
flagellin; Reviewed |
1-553 |
1.32e-29 |
|
flagellin; Reviewed
Pssm-ID: 236260 [Multi-domain] Cd Length: 572 Bit Score: 122.79 E-value: 1.32e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 1 MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEG 80
Cdd:PRK08411 1 MGFRINTNVAALNAKANSDLNAKSLDASLSRLSSGLRINSAADDASGMAIADSLRSQANTLGQAISNGNDALGILQTADK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 81 ALSEINNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLSKD-GSMKIQVGANDGETITID 159
Cdd:PRK08411 81 AMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDNIANTTSFNGKQLLSGNfTNQEFQIGASSNQTVKAT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 160 LKKIDSDTLNLAGFNVNGEGETA-NTAATLKDMVGL---KLDNTGVTTAgvnryiADKAVASSTDILNAVAGVDGSKVST 235
Cdd:PRK08411 161 IGATQSSKIGVTRFETGARITTSgVVQLTIKNYNGIddfKFQNVVISTS------VGTGLGALAEEINKNADKTGVRATF 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 236 EADVGFGAAAPGTPVEYTYHKDTNT-----YTASASVDATQLAAFLNPEAGGTTAATVSIGNGTTAQEQKVIIAKDGSLT 310
Cdd:PRK08411 235 DVETTGVAAIKAGTTSDDFAINGVTigkveYKDGDGNGALVAAINSVKDTTGVEASIDENGKLVLTSRDGRGIKIDGDIG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 311 AADDGAALYLDDTGNLSKT-NAGTDTQAKLSDLMANNANAKTVIT-------TDKGTFTANTTKFDGVDISVDASTFANA 382
Cdd:PRK08411 315 GGSGILANMKENYGRLSLVkNDGKDILISGTNLSFAGMGATDMISqasvslrESKGQIDANVADAMGFNSYKGGVMIQGF 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 383 VKNETYTATVGVTLPAT--YTVNNGTAASAYLVDGKVSKTPAEYFAQADGTITSG--ENAATSKAIYVSANGNLTTNTTS 458
Cdd:PRK08411 395 SSVSAFMSSEGSGFSQGsgYSVGSGKNYSVGLSSGIQISSASAMSTVYVVSAGSGfsSGSNLSQFAAMKTTAANVKDETA 474
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 459 ESEATTNPLAALD---DAIASIDKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGN 535
Cdd:PRK08411 475 GVTTLKGAMAVMDiaeTAITNLDQIRADIGSVQNQVTSTINNITVTQVNVKAAESQIRDVDFAAESANYSKANILAQSGS 554
|
570
....*....|....*...
gi 9211052 536 SVLAKANQVPQQVLSLQQ 553
Cdd:PRK08411 555 YAMAQANAVQQNVLRLLQ 572
|
|
| PRK13589 |
PRK13589 |
flagellin A; |
1-553 |
3.79e-28 |
|
flagellin A;
Pssm-ID: 172158 [Multi-domain] Cd Length: 576 Bit Score: 118.59 E-value: 3.79e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 1 MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEG 80
Cdd:PRK13589 1 MGFRINTNIGALNAHANSVVNSRELDKSLSRLSSGLRINSAADDASGMAIADSLRSQAATLGQAINNGNDAIGILQTADK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 81 ALSEINNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLSKD-GSMKIQVGANDGETITID 159
Cdd:PRK13589 81 AMDEQLKILDTIKTKATQAAQDGQSLKTRTMLQADINRLMEELDNIANTTSFNGKQLLSGNfTNQEFQIGASSNQTIKAT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 160 LKKIDSDTLNLAGFNVNGEGETANTAA-TLKDMVGL---KLDNTGVTTAgvnryiADKAVASSTDILNAVAGVDGSKVST 235
Cdd:PRK13589 161 IGATQSSKIGVTRFETGGRSFTSGEVQlTIKNYNGIddfKFQKVVISTS------VGTGLGALAEEINKSADKTGVRATF 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 236 EADV-GFGAAAPGTpveytyhkdTNTYTASASVDATQLAAFLNPEAGGTTAATVSIGNGTTAQEQK------VIIAKDGS 308
Cdd:PRK13589 235 TVETtGVAAIKAGT---------TSQDFAINGVTIGQVAYKDGDGNGALVSAINSVKDTTGVEASKdangqlVLTSRDGR 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 309 LTAADD----GAALYLDDTGNLSK----TNAGTDTQAKLSDLMANNANAKTVITT-------DKGTFTANTTKFDGVDIS 373
Cdd:PRK13589 306 GIKIDGniggGAGILANMKENYGRlslvKNDGKDILISGTNLSAIGMGATDMISQasvslreSKGRIDANIADAMGFNSY 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 374 VDASTFA-----NAVKNETYTATVGVTLPATYTVNNGTAASAYLVDGKVSKTPAE-----YFAQADGTITSGENAATSKA 443
Cdd:PRK13589 386 KGGGKFVvtggfSSVSAFMSSEGSGFSRGSGYSVGSGKNYSVGLSQGIQIISSASamstvYNVSAGSGFSSGSGLSQFAT 465
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 444 IYVSANGnlTTNTTSESEATTNPLAALD---DAIASIDKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATE 520
Cdd:PRK13589 466 MKTTAAG--VKDETAGVTTLKGAMAVMDiaeTAITNLDQIRADIGSVQNQLQVTINNITVTQVNVKAAESTIRDVDFAAE 543
|
570 580 590
....*....|....*....|....*....|...
gi 9211052 521 VSNMSKAQIIQQAGNSVLAKANQVPQQVLSLQQ 553
Cdd:PRK13589 544 SANFSKYNILAQSGSYAMSQANAVQQNVLKLLQ 576
|
|
| PRK12807 |
PRK12807 |
flagellin; Provisional |
5-227 |
5.00e-28 |
|
flagellin; Provisional
Pssm-ID: 171737 [Multi-domain] Cd Length: 287 Bit Score: 113.76 E-value: 5.00e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 5 INTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGALSE 84
Cdd:PRK12807 3 INTNINSMRTQEYMRQNQDKMNVSMNRLSSGKRINSAADDAAGLAIATRMRARQSGLEKASQNTQDGMSLIRTAESAMNS 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 85 INNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLSKDGSMKIQVGANDGETITIdlKKID 164
Cdd:PRK12807 83 VSNILTRMRDIAVQSSNGTNTAENQSALQKEFAELQEQIDYIAKNTEFNDKNLLAGTGAVTIGSTSISGAEISI--ETLD 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 9211052 165 SDTLNLagfNVNGEGETANTAAtlkdmvgLKLDNTGVTTAGVNRYIADKAVASSTDILNAVAG 227
Cdd:PRK12807 161 SSATNQ---QITIKLANTTAEK-------LGIDATTSNISISGAASALAAISALNTALNTVAG 213
|
|
| PRK12803 |
PRK12803 |
flagellin; Provisional |
4-143 |
9.06e-25 |
|
flagellin; Provisional
Pssm-ID: 183758 [Multi-domain] Cd Length: 335 Bit Score: 105.28 E-value: 9.06e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGALS 83
Cdd:PRK12803 2 IINHNTSAINASRNNSINAANLSKTQEKLSSGHRINRASDDAAGMGVAGKINAQIRGLSQASRNTSKAINFIQTTEGNLN 81
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 84 EINNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLSKDGS 143
Cdd:PRK12803 82 EVEKVLVRMKELAVQSGNGTYSDADRGSIQIEIEQLTDEINRIADQAQYNQMHMLSNKSA 141
|
|
| Flagellin_C |
pfam00700 |
Bacterial flagellin C-terminal helical region; Flagellins polymerize to form bacterial ... |
467-551 |
9.03e-20 |
|
Bacterial flagellin C-terminal helical region; Flagellins polymerize to form bacterial flagella. There is some similarity between this family and pfam00669, particularly the motif NRFXSXIXXL. It has been suggested that these two regions associate and this is shown to be correct as structurally this family forms an extended helix that interacts with pfam00700.
Pssm-ID: 425827 [Multi-domain] Cd Length: 86 Bit Score: 83.92 E-value: 9.03e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 467 LAALDDAIASIDKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQ 546
Cdd:pfam00700 1 LDLIDEAITDLDSVRADLGAVQNRLESATTNLNNQQDNLKAAISRIEDVDPAEESTRMTKLQIQIQASYSLLSQANQLPQ 80
|
....*
gi 9211052 547 QVLSL 551
Cdd:pfam00700 81 SLLNL 85
|
|
| PRK12805 |
PRK12805 |
FliC/FljB family flagellin; |
5-177 |
8.75e-19 |
|
FliC/FljB family flagellin;
Pssm-ID: 183760 [Multi-domain] Cd Length: 287 Bit Score: 86.85 E-value: 8.75e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 5 INTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGALSE 84
Cdd:PRK12805 3 VNTNIISLKTQEYLRKNNEGMTQAQERLASGKRINSSLDDAAGLAVVTRMNVKSTGLDAASKNSSMGIDLLQTADSALSS 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 85 INNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLSkdgsmkiQVGANDGETITIDLKKID 164
Cdd:PRK12805 83 MSSILQRMRQLAVQSSNGSFSDEDRKQYTAEFGSLIKELDHVADTTNYNNIKLLD-------QTATGAATQVSIQASDKA 155
|
170
....*....|...
gi 9211052 165 SDTLNLAGFNVNG 177
Cdd:PRK12805 156 NDLINIDLFNAKG 168
|
|
| flagell_flgL |
TIGR02550 |
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated ... |
5-212 |
5.67e-18 |
|
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated proteins designated FlgL (or HAP3) encoded in bacterial flagellar operons. A N-terminal region of about 150 residues and a C-terminal region of about 85 residues are conserved. Members show considerable length heterogeneity between these two well-conserved terminal regions; the seed alignment 486 columns, 393 of which are represented in the model, while members of this family are from 287 to over 500 residues in length. This model distinguishes FlgL from the flagellin gene product FliC. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 274195 [Multi-domain] Cd Length: 306 Bit Score: 84.71 E-value: 5.67e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 5 INTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGALSE 84
Cdd:TIGR02550 2 VSTNMLYNNSLNSITNNQSRLAKLQQQLSSGKRINKPSDDPVAAAQALNLNQELAQLEQYQKNIDDAKNWLSQTETALSS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 85 INNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNG---------------------VNVLSKDGS 143
Cdd:TIGR02550 82 VGDVLQRARELAVQAANGTLSDDDRKAIAKEIKQLLDQLVNLANTKDGNGryifsgtktdtppfsedeggeVTYNGDGGQ 161
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 9211052 144 MKIQVGANDGETITIDLKKIDSDTLNLAGfnvNGEGETANTAATLKDMVGLKldNTGVTTAGVNRYIAD 212
Cdd:TIGR02550 162 RKVQVASNRSMPIGHPGDKVFMSIPNNDK---SVFSTGDDLIDALKKLEDAL--SSGDAKAALSASLND 225
|
|
| PRK12802 |
PRK12802 |
flagellin; Provisional |
425-553 |
1.50e-17 |
|
flagellin; Provisional
Pssm-ID: 139237 [Multi-domain] Cd Length: 282 Bit Score: 83.00 E-value: 1.50e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 425 FAQADGTITSGENAATSKAIYVSANGNLTTNTTSESEATT--NPLAALDDAIASIDKFRSSLGAIQNRLDSAVTNLNNTT 502
Cdd:PRK12802 152 NTGQSNQITFGLSASFDATGLGVGSGTLITGADSAAAETNaqAAITAIDAALQTINTTRADLGAAQNRLQSTISNLQNIN 231
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 9211052 503 TNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLQQ 553
Cdd:PRK12802 232 ENASAARGRVQDTDFAAETAQLTKQQTLQQASTSVLAQANQLPSAVLKLLQ 282
|
|
| flgL |
PRK07701 |
flagellar hook-associated protein FlgL; Validated |
5-212 |
6.96e-17 |
|
flagellar hook-associated protein FlgL; Validated
Pssm-ID: 181087 [Multi-domain] Cd Length: 298 Bit Score: 81.19 E-value: 6.96e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 5 INTNSLslitqNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGALSE 84
Cdd:PRK07701 8 LANNFL-----RNINSNLEKLDKYQEQLSTGKKITRPSDDPVVAMKSLRYRTDLAEVEQYQKNASDAKSWLENTESALDQ 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 85 INNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEI-----DRVSGQTQFNGVNVLSK---DGSMKIQVGANDGEtI 156
Cdd:PRK07701 83 ATDILQRARELAVQAANGTNTQTDRQAIAQEIEQLKEQLiqianTQYNGRYIFNGTKTDTPpvtDDGDNIENSTDSGD-I 161
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 9211052 157 TIDLKKIDSDTLNLAGFNVNGeGETANTAATLKDMVGLKLDNTGVTTAGVNRYIAD 212
Cdd:PRK07701 162 EFEIAKGNTINVNVPGDKAFG-GQSGGGSNLFEMLDNLENALDSGDTQGVSNLLSD 216
|
|
| FlgL |
COG1344 |
Flagellin and related hook-associated protein FlgL [Cell motility]; |
437-545 |
1.10e-15 |
|
Flagellin and related hook-associated protein FlgL [Cell motility];
Pssm-ID: 440955 [Multi-domain] Cd Length: 245 Bit Score: 76.83 E-value: 1.10e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 437 NAATSKAIYVSANGNlttnttseSEATTNPLAALDDAIASIDKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDAD 516
Cdd:COG1344 139 TATDTPPFQVDYQGD--------AGQRTAALGALDAALDNVSSARAELGARQNRLESAINNLSDLSENLTAALSRLEDAD 210
|
90 100
....*....|....*....|....*....
gi 9211052 517 YATEVSNMSKAQIIQQAGNSVLAKANQVP 545
Cdd:COG1344 211 MAEAITRLTKLQTLLQAALAALAQANQLS 239
|
|
| PRK06663 |
PRK06663 |
flagellar hook-associated protein 3; |
14-123 |
1.89e-13 |
|
flagellar hook-associated protein 3;
Pssm-ID: 180648 [Multi-domain] Cd Length: 419 Bit Score: 72.41 E-value: 1.89e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 14 TQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGALSEINNNLQRIR 93
Cdd:PRK06663 13 LKSSLRRQESKMTKLQNQLSTGQRIQKLRDDPTAATHSIRYKSRLFKLDRYQKNIDDGKDRLRYAEGYLQSITNILQRAR 92
|
90 100 110
....*....|....*....|....*....|
gi 9211052 94 ELTVQATTGTNSDSDLDSIQDEIKSRLDEI 123
Cdd:PRK06663 93 ELAVQGANGTYQADDKKKIAKEIDELLEDL 122
|
|
| flgL |
PRK08870 |
flagellar hook-associated protein FlgL; Reviewed |
15-123 |
5.10e-13 |
|
flagellar hook-associated protein FlgL; Reviewed
Pssm-ID: 236345 [Multi-domain] Cd Length: 404 Bit Score: 70.71 E-value: 5.10e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 15 QNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGALSEINNNLQRIRE 94
Cdd:PRK08870 13 VNSMLDQQSQLSQLQQQLSSGKKLLTPSDDPVAAAQAVNLSQQSALLDQYTKNINLARNRLQQEESTLGSVEDLLQRARE 92
|
90 100
....*....|....*....|....*....
gi 9211052 95 LTVQATTGTNSDSDLDSIQDEIKSRLDEI 123
Cdd:PRK08870 93 LVVQAGNGSLSDSDRQAIATELQGLRDQL 121
|
|
| PRK12804 |
PRK12804 |
flagellin; Provisional |
312-551 |
2.67e-12 |
|
flagellin; Provisional
Pssm-ID: 183759 [Multi-domain] Cd Length: 301 Bit Score: 67.72 E-value: 2.67e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 312 ADDGAALYLDDTGNLSKTNAgtdTQAKLSDLMANNANAKTVITTDKGTFTANTTKF-DGVDISVDASTF-ANAVKNETYT 389
Cdd:PRK12804 66 AQDGISLIQTAEGALTETHS---ILQRVRELVVQAGNTGTQDGTDLGAIQDEIKALvDEIDGISDRTEFnGKKLLDGTFK 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 390 ATVGVTLPATYTVNNGTAASAYL-VDGKVSKTPAEYFAQADGTITSGEnaaTSKAIYVSangNLTTNTTSESEATTNPLA 468
Cdd:PRK12804 143 PAAPAAGTKSLTFQIGANAAQQLsVNIEAMSADALGVKDTDGTLVTGK---SVSDIDVT---KFANAAAAADGGFDDQLK 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 469 ALDDAIASIDKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQV 548
Cdd:PRK12804 217 IVDGAIKQVSDQRSKLGAVQNRLEHTINNLGASGENLTAAESRIRDVDMAKEMSEFTKNNILSQASQAMLAQANQQPQNV 296
|
...
gi 9211052 549 LSL 551
Cdd:PRK12804 297 LQL 299
|
|
| PRK12807 |
PRK12807 |
flagellin; Provisional |
440-553 |
5.43e-11 |
|
flagellin; Provisional
Pssm-ID: 171737 [Multi-domain] Cd Length: 287 Bit Score: 63.69 E-value: 5.43e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 440 TSKAIYVSANGNLTTNTTSESEATTNPLAALDDAIASIDKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYAT 519
Cdd:PRK12807 174 NTTAEKLGIDATTSNISISGAASALAAISALNTALNTVAGNRATLGATLNRLDRNVENLNNQATNMASAASQIEDADMAK 253
|
90 100 110
....*....|....*....|....*....|....
gi 9211052 520 EVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLQQ 553
Cdd:PRK12807 254 EMSEMTKFKILNEAGISMLSQANQTPQMVSKLLQ 287
|
|
| flgL |
PRK07192 |
flagellar hook-associated protein FlgL; Reviewed |
5-123 |
3.59e-10 |
|
flagellar hook-associated protein FlgL; Reviewed
Pssm-ID: 235956 [Multi-domain] Cd Length: 305 Bit Score: 61.19 E-value: 3.59e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 5 INTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGALSE 84
Cdd:PRK07192 3 ISTNTLYSTMLRSIQQLQAGLGKLQQQMSTGKRILTPSDDPIASARLLELSREQSNNSQYADNIANLSNSLNNQEGHLSG 82
|
90 100 110
....*....|....*....|....*....|....*....
gi 9211052 85 INNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEI 123
Cdd:PRK07192 83 VNDQLQSIRSLLVAAGNGSLSDEDRSAMATELRSMLDSL 121
|
|
| FliC |
pfam12445 |
Flagellin protein; This domain family is found in bacteria, and is typically between 125 and ... |
344-458 |
2.78e-09 |
|
Flagellin protein; This domain family is found in bacteria, and is typically between 125 and 147 amino acids in length. The family is found in association with pfam00669, pfam00700. There are two completely conserved G residues that may be functionally important. This family is the flagellin motor protein which confers motility to bacterial cells.
Pssm-ID: 372114 Cd Length: 127 Bit Score: 55.49 E-value: 2.78e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 344 ANNANAKTVITTDKGT---FTANTTKFDGVDISVDASTFANAVKNETYTATVG-----VTLPATYTVNNGTAASAYLVDG 415
Cdd:pfam12445 6 AGGTAVAATITTGSGTtytFAGGAGTGDVTGATVSADAMLSATKSAGYTATTGaitynVGATGTVTFGGGVADVYVDADG 85
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 9211052 416 KVSKTP---AEYFAQADGTITSGenaaTSKAIYVSANGNLTTNTTS 458
Cdd:pfam12445 86 ALTTTAsytVTYFVQADGSVTNG----SGKAVYVDADGKLTTDATT 127
|
|
| flgL |
PRK12717 |
flagellar hook-associated protein 3; |
17-543 |
1.14e-08 |
|
flagellar hook-associated protein 3;
Pssm-ID: 171679 [Multi-domain] Cd Length: 523 Bit Score: 57.83 E-value: 1.14e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 17 NINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGALSEINNNLQRIRELT 96
Cdd:PRK12717 15 NYQRNYSNLVKTQEQASSGIRIQTAADDPVGAARLLQLQQQQAMLDQYSGNITTIKNSLTQEESTLTSINDTLQRARELA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 97 VQATTGTNSDSDLDSIQDEIKSRLDEI------DRVSGQTQFNGVN------VLSKDGSMKIQvgandGETITIDLKKid 164
Cdd:PRK12717 95 VSAGNGGLTDADRKAIASELKQIEAQLlglmnsKDANGQYLFAGSKsdtppyVRNADGTYSYQ-----GDQTQLSLQV-- 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 165 SDTLNLAgfnVNGEGETANTAATlkdmvglkldNTGVTTAgvnryiadKAVASSTDilNAVAGVDGSKVSTEA--DVGFG 242
Cdd:PRK12717 168 GDTLNLA---ANDTGYSAFEQAV----------NTSRTQT--------TLTSPATD--DGRVGLSNGLVTSSVtyNAQFR 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 243 AAAPGTP--VEYTYHKDTNTYTASASVDATQLAAFLNPEAGGTTAATVSIgngttaQEQKVIIAKDGSLTAADDGAALYL 320
Cdd:PRK12717 225 AGEPYTLtfTSGTQFKITDASGNDVTSEASGGGKFDPGTEGGQTISFRGV------DLELNVNLKAGSGADADAALAGHS 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 321 DDTGNLSKTNAGTDTqaklsdlmANNANAKTVittdKGTFTANTTKFDGVDISVDAS-TFANAVKNETYTATVGVTLPAT 399
Cdd:PRK12717 299 FTLQSKPDTFTATRS--------PGNTSTAQV----TGATITDPAAYNSTFPSSGAVlKFTSATAYELYAQPVTADSKPI 366
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 400 YT-VNNGTAASAYLVDGKVSKTPA---EYFAQADGTITsgENAATSKAIYVSAngnLTTNTTSESEATTNPLAALDDAIA 475
Cdd:PRK12717 367 SSgTLTGNTATAAGVTFTLSGTPAagdQFSVQANTHQT--QNILDTLSQLRKA---LSTPTDGDPAARQALRAALASALG 441
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 9211052 476 SIDK-------FRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQ 543
Cdd:PRK12717 442 NLASaidqvdtARSSIGARGNALDIQGTTNESLSLANTTTQSSIRDSDPAEATTRLTLQQTMLEASQLAFVKISQ 516
|
|
| PRK12805 |
PRK12805 |
FliC/FljB family flagellin; |
456-551 |
1.32e-05 |
|
FliC/FljB family flagellin;
Pssm-ID: 183760 [Multi-domain] Cd Length: 287 Bit Score: 47.17 E-value: 1.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 456 TTSESEATTNPLAALDDAIASIDKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGN 535
Cdd:PRK12805 189 SVADADSSQEATEAIDELINNISNGRALLGAGMSRLSYNVSNVNNQSIATKASASSIEDADMAAEMSEMTKYKILTQTSI 268
|
90
....*....|....*.
gi 9211052 536 SVLAKANQVPQQVLSL 551
Cdd:PRK12805 269 SMLSQANQTPQMLTQL 284
|
|
| PRK14692 |
PRK14692 |
flagellar hook-associated protein FlgL; |
7-140 |
1.82e-05 |
|
flagellar hook-associated protein FlgL;
Pssm-ID: 173155 [Multi-domain] Cd Length: 749 Bit Score: 47.65 E-value: 1.82e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 7 TNSLSLITQ-NNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGALSEI 85
Cdd:PRK14692 4 TNKLNFTNSvNNSMGGQSALYQISQQLASGLKIQNSYEDASTYIDNTRLEYEIKTLEQVKESTSRAQEMTQNSMKALQDM 83
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 86 NNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEI-----DRVSGQTQFNGVNVLSK 140
Cdd:PRK14692 84 VKLLEDFKVKVTQAASDSNSQTSREAIAKELERIKESIvqlanTSVNGQYLFAGSQVANK 143
|
|
| flgL |
PRK08073 |
flagellar hook-associated protein 3; |
6-192 |
9.61e-05 |
|
flagellar hook-associated protein 3;
Pssm-ID: 181222 [Multi-domain] Cd Length: 287 Bit Score: 44.59 E-value: 9.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 6 NTNSLSLITQ-NNINKNQSALSSSIerlSSGLRINSAKDD--AAGQAIAnrFTSNIKGLTQAARNANDGISVAQTTEGAL 82
Cdd:PRK08073 6 FQNANWAKNQlMDLNVQQQYHRNQV---TSGKKNLSMSEDplAASKSFA--IQHSLANIEQMQKDVADSKNVLNQTENTL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 83 SEINNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEIDRVSgQTQFNGVNVLSKDgSMKIQVGANDG--ETITIDL 160
Cdd:PRK08073 81 SGMSKSLTRVDQLVLQALNGTNDEKELKAIGAEIDQILKQVVYLA-NTKEQGRYVFGGD-SAEKKPFTEDGtyQGGTEDV 158
|
170 180 190
....*....|....*....|....*....|..
gi 9211052 161 KKIDSDTLNLAGFNvNGEGETANTAATLKDMV 192
Cdd:PRK08073 159 NWRLNDGYEVKAFR-NGEALLTPVINTLKKMV 189
|
|
| FhaB |
COG3210 |
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ... |
2-537 |
2.03e-04 |
|
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain] Cd Length: 1698 Bit Score: 44.37 E-value: 2.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 2 AQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGA 81
Cdd:COG3210 796 IDITADGTITAAGTTAINVTGSGGTITINTATTGLTGTGDTTSGAGGSNTTDTTTGTTSDGASGGGTAGANSGSLAATAA 875
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 82 LSEINNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLSKDGSMKIQVGANDGETITIDLK 161
Cdd:COG3210 876 SITVGSGGVATSTGTANAGTLTNLGTTTNAASGNGAVLATVTATGTGGGGLTGGNAAAGGTGAGNGTTALSGTQGNAGLS 955
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 162 KIDSDTLNLAGFNVNGEGETANTAATLKDMVGLKLDNTGVTTAGVNRYIADKAVASSTDILNAVAGVDGSKVSTEADVGF 241
Cdd:COG3210 956 AASASDGAGDTGASSAAGSSAVGTSANSAGSTGGVIAATGILVAGNSGTTASTTGGSGAIVAGGNGVTGTTGTASATGTG 1035
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 242 GAAAPGTPVEYTYHKDTNTYTASASVDATQLAAFLNPEAGGTTAATVSIGNGTTAQEQKVIIAKDGSLTAADDGAALYLD 321
Cdd:COG3210 1036 TAATAGGQNGVGVNASGISGGNAAALTASGTAGTTGGTAASNGGGGTAQASGAGTTHTLGGITNGGATGTSGGTTTSTGG 1115
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 322 DTGNLSKTNAGTDTQAKLSDLMANNANAKTVITTDKGTFTANTTKFDGVDISVDASTFANAVKNETYTATVGVTLPATYT 401
Cdd:COG3210 1116 VTASKVGGTTTVGATGTSTASTEAAGAGTLTGLVAVSAVAGGASSASAGDTTAVAAATTTTTGSAINGGADSAATEGTAG 1195
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 402 VNNGTAASAYLVDGKVSKTPAEYFAQADGTITSGENAATSKAIYVSANGNLTTNTTSESEATTNPLAALDDAIASIDKFR 481
Cdd:COG3210 1196 TDLKGGDSTGGSTTTIGTTNVTTTTTLTASDTGNTTATGGSSAGQTGSFVAAGSASGTGDATTGATAGAVSNGATSTVAG 1275
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*.
gi 9211052 482 SSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSV 537
Cdd:COG3210 1276 NAGATATGSTVDIGSTSATSAGGSLDTTGNTAGANGATVGTGIGGTTATGTAVAAV 1331
|
|
| flgL |
PRK12718 |
flagellar hook-associated protein FlgL; Provisional |
9-139 |
2.89e-04 |
|
flagellar hook-associated protein FlgL; Provisional
Pssm-ID: 79176 [Multi-domain] Cd Length: 510 Bit Score: 43.64 E-value: 2.89e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 9 SLSLITQNNIN---KNQSALSSSIERLSSGLRINSAKDD--AAGQAIANRFTSNIKGLTQAARNANDGISVAQTTegALS 83
Cdd:PRK12718 4 STALIYQNGLNgvlNQEAAMARLQEQLSSGRRVLTPADDplAAALAVNVSQTSSMNSNYDANRKQAEQALGAQTN--TLQ 81
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 9211052 84 EINNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLS 139
Cdd:PRK12718 82 SVVKNMQEMLKRVVEAGNGTMSDADRQALVIALKGAREELVGLANATDGNGQYLFS 137
|
|
| flagell_flgL |
TIGR02550 |
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated ... |
467-543 |
3.83e-04 |
|
flagellar hook-associated protein 3; This protein family consists of flagellar hook-associated proteins designated FlgL (or HAP3) encoded in bacterial flagellar operons. A N-terminal region of about 150 residues and a C-terminal region of about 85 residues are conserved. Members show considerable length heterogeneity between these two well-conserved terminal regions; the seed alignment 486 columns, 393 of which are represented in the model, while members of this family are from 287 to over 500 residues in length. This model distinguishes FlgL from the flagellin gene product FliC. [Cellular processes, Chemotaxis and motility]
Pssm-ID: 274195 [Multi-domain] Cd Length: 306 Bit Score: 42.72 E-value: 3.83e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 9211052 467 LAALDDAIASIDKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQ 543
Cdd:TIGR02550 223 LNDLDKALDNVLSARAEVGARLNRLENLNSRLSEQKLQLTEQLSDLEDVDLAEAISDLNMQQAALQAALKTFAKIQQ 299
|
|
| flgL |
PRK08412 |
flagellar hook-associated protein FlgL; Validated |
16-140 |
7.07e-04 |
|
flagellar hook-associated protein FlgL; Validated
Pssm-ID: 236261 [Multi-domain] Cd Length: 827 Bit Score: 42.50 E-value: 7.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 16 NNINKNQSALSSSI----ERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGALSEINNNLQR 91
Cdd:PRK08412 10 NQMNNYQNALQNKLndvnTQIASGLKIQYGYQDSDVYNQNLKLQYEENTLDQGIDVASSAYTFTLNTDKALNEFSKTMEA 89
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 9211052 92 IRELTVQATTGTNSDSDLDSIQDEIKSRLDEIDRVS-----GQTQFNGVNVLSK 140
Cdd:PRK08412 90 FKTKLIQAANDVHSETSREAIANDLEALKEHMINLAntsigGEFLFSGSKVDTK 143
|
|
| flgL |
PRK07192 |
flagellar hook-associated protein FlgL; Reviewed |
438-543 |
1.07e-03 |
|
flagellar hook-associated protein FlgL; Reviewed
Pssm-ID: 235956 [Multi-domain] Cd Length: 305 Bit Score: 41.16 E-value: 1.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 438 AATSKAIYVSANGNLTTNTTSESEATTNPLAALDDAIASIDKFRSSLGAIQNRLDSAVTNLNNTTTNLSEAQSRIQDADY 517
Cdd:PRK07192 193 NTLDKLIDLLETPALPAADAALTAAVDEALGAIDDALDNVLTVRTELGSRQNELDLLDGNHEDRKLQYQKILSDLQDLDY 272
|
90 100
....*....|....*....|....*.
gi 9211052 518 ATEVSNMSKAQIIQQAGNSVLAKANQ 543
Cdd:PRK07192 273 AEALSDLSNQMAALEAAQKTFVKINS 298
|
|
| AidA |
COG3468 |
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ... |
6-456 |
2.26e-03 |
|
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442691 [Multi-domain] Cd Length: 846 Bit Score: 41.09 E-value: 2.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 6 NTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGALSEI 85
Cdd:COG3468 3 SGGGGGATGLGGGGTGGGGGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGAGGGGGGAGSGGGLAGAGSG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 86 NNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLSKDGSMKIQVGANDGETITIDLKKIDS 165
Cdd:COG3468 83 GTGGNSTGGGGGNSGTGGTGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGGTGAAAAGGGTG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 166 DTLNLAGFNVNGEGETANTAATLKDMVGLKLDNTGVTTAGVNRYIADKAVASSTDILNAVAGVDGSKVSTEADVGFGAAA 245
Cdd:COG3468 163 SGGGGSGGGGGAGGGGGGGAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAGSGGNTGGGVGGGG 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 246 PGTPVEYTYHKDTNTYTASASVDATQLAAFLNPEAGGTTAATVSIGNGTTAQEQKVIIAKDGSLTAADDGAALYLDDTGN 325
Cdd:COG3468 243 GSAGGTGGGGLTGGGAAGTGGGGGGTGTGSGGGGGGGANGGGSGGGGGASGTGGGGTASTGGGGGGGGGNGGGGGGGSNA 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 326 LSKTNAGTDTQAKLSDLMANNANAKTVITTDKGTFTANTTKFDGVDISVDASTFANAVKNETYTATVGVTLPATYTVNNG 405
Cdd:COG3468 323 GGGSGGGGGGGGGGGGGGTTLNGAGSAGGGTGAALAGTGGSGSGGGGGGGSGGGGGAGGGGANTGSDGVGTGLTTGGTGN 402
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 9211052 406 TAASAYLVDGkvsktpaeyfaqaDGTITSGENAATSKAIYVSANGNLTTNT 456
Cdd:COG3468 403 NGGGGVGGGG-------------GGGLTLTGGTLTVNGNYTGNNGTLVLNT 440
|
|
| AidA |
COG3468 |
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ... |
4-406 |
2.53e-03 |
|
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442691 [Multi-domain] Cd Length: 846 Bit Score: 40.70 E-value: 2.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 4 VINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGALS 83
Cdd:COG3468 31 AGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGAGGGGGGAGSGGGLAGAGSGGTGGNSTGGGGGNSGTGGTGGGGGGGGS 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 84 EINNNLQRIRELTVQATTGTNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLSKDGSMKIQVGANDGETITIDLKKI 163
Cdd:COG3468 111 GNGGGGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGGTGAAAAGGGTGSGGGGSGGGGGAGGGGGGGAGGSGGAGS 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 164 DSDTLNLAGFNVNGEGETANTAATLKDMVGLKLDNTGVTTAGVNRYIADKAVASSTDILNAVAGVDGSKVSTEADVGFGA 243
Cdd:COG3468 191 TGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAGSGGNTGGGVGGGGGSAGGTGGGGLTGGGAAGTGGGGGGTGT 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 244 AAPGTPVEYTYHKDTNTYTASASVDATQLAAFLNPEAGGTTAATVSIGNGTTAQEQKVIIAKDGSLTAADDGAALYLDDT 323
Cdd:COG3468 271 GSGGGGGGGANGGGSGGGGGASGTGGGGTASTGGGGGGGGGNGGGGGGGSNAGGGSGGGGGGGGGGGGGGTTLNGAGSAG 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 324 GNLSKTNAGTDTQAKLSDLMANNANAKTVITTDKGTFTANTTKFDGVDISVDASTFANAVKNETYTATVGVTLPAT--YT 401
Cdd:COG3468 351 GGTGAALAGTGGSGSGGGGGGGSGGGGGAGGGGANTGSDGVGTGLTTGGTGNNGGGGVGGGGGGGLTLTGGTLTVNgnYT 430
|
....*
gi 9211052 402 VNNGT 406
Cdd:COG3468 431 GNNGT 435
|
|
| PRK12687 |
PRK12687 |
flagellin; Reviewed |
7-143 |
3.84e-03 |
|
flagellin; Reviewed
Pssm-ID: 105853 [Multi-domain] Cd Length: 311 Bit Score: 39.65 E-value: 3.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 7 TNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGALSEI- 85
Cdd:PRK12687 6 TNTSAMTALQTLRNVSSSLATTQNRISTGYRVATASDNSAYWSIATTMRSDNEALSAVSDALGLGAATVDTMYTALTSVv 85
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 9211052 86 ---NNNLQRIRELTVQATTgtnSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLSKDGS 143
Cdd:PRK12687 86 gdsKSGLTALKAKLVAARE---PGIDRTKIQSEITAIQNDLKNTAGLAVFNGENWLSVDSS 143
|
|
| PRK12687 |
PRK12687 |
flagellin; Reviewed |
429-551 |
4.87e-03 |
|
flagellin; Reviewed
Pssm-ID: 105853 [Multi-domain] Cd Length: 311 Bit Score: 39.26 E-value: 4.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 9211052 429 DGTITSGENAATSKAIyvsaNGNLTTNTTSESEATTNPLAALDDAIASIDKFRSSLGAIQNRLDSAVTNLNNTTTNLSEA 508
Cdd:PRK12687 191 DKTVTVGTATASVSSI----DIHLLTDSATDLTKLDGYIGIVDQALGSVTQASADLGATKTRIDSNSNFVKSLRDAIDRG 266
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 9211052 509 QSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSL 551
Cdd:PRK12687 267 VGQLVDADMNAESTRLQALQTQQQLGIQALSIANQGSQSILSL 309
|
|
| flagella_HExxH |
NF033876 |
flagellinolysin; Flagellinolysin is a variant form of bacterial flagellin in with the normally ... |
112-143 |
8.61e-03 |
|
flagellinolysin; Flagellinolysin is a variant form of bacterial flagellin in with the normally hypervariable central region contains an M9 (MEROPS classification) family metalloprotease domain, with its signature HExxH motif. The founding member of the family, from the pathogen Clostridium haemolyticum, shows EDTA-sensitive metalloprotease activity. The large count of flagellin subunits in a complete flagellum means the capacity of flagellinolysin to perform as a protease may have implications for host-pathogen relationships.
Pssm-ID: 468217 Cd Length: 380 Bit Score: 38.79 E-value: 8.61e-03
10 20 30
....*....|....*....|....*....|..
gi 9211052 112 IQDEIKSRLDEIDRVSGQTQFNGVNVLSKDGS 143
Cdd:NF033876 1 LQKEINQLKQEIDRIAETTEFNGKKLFDQGAS 32
|
|
| |
