|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
6-569 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 564.77 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 6 YLYQKISFFLVNLMFIAGFTGVFLSSEGTSIFFEW-FLGGSSVNFSMIFLLDSMSCFFLAVVLCISGNVVWYSKSYMALD 84
Cdd:MTH00165 2 SMCLISFFFLFFLSLILFFLGLYFLLNDYSLFIEWeLFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGD 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 85 PNANRFILLVLGFVASMAILILSPNILSILLGWDGLGLISYGLVIYYPSKKSSSAGMITVLSNRVGDVCILLSIAWFVSV 164
Cdd:MTH00165 82 KNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYCLVIYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMNF 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 165 GDFNFSIW-AFYNNVEFSNWVPLLVLLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSFIL-GET 242
Cdd:MTH00165 162 GSWNFIFYlDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLfSSF 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 243 CSALLLFISIMTMFMSGVVAIFEYDLKKIIALSTLSQLGMMMFSISLGLYELAFFHLLTHALFKALLFLCAGILIHGAGN 322
Cdd:MTH00165 242 FSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSN 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 323 TQDIRSFGGLSLNFPLVTVCMNLANLSLCGVPFLAGFYSKDLIVELACQYSWGIFVLLMMFICLSLTVLYSVRLTYLSFV 402
Cdd:MTH00165 322 SQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMS 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 403 GPYGGGTSISVCESDYSLVGPVVILSFTSLVSGPILSWLNFPAPVLIFLPVFLKWGALFFVGVSLLV-----MLSLQGLT 477
Cdd:MTH00165 402 GDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPYMICLPFYLKLLTLFVILLGGWLgyelsLMSLSYNL 481
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 478 YSYKWGAVSKFSGLMWFLPWLTGQGFSMKTLKNADHLLKIYDQGWLEFYSSKGLEVVGGKVNTLNLKFQHSSLKLHFLIF 557
Cdd:MTH00165 482 KSLKNYKLSSFLGSMWFMPFLSTYGISYYPLNLGSLSLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLSF 561
|
570
....*....|..
gi 87083565 558 LLWLFLCFIYIL 569
Cdd:MTH00165 562 LLWMIILLLLFL 573
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
8-551 |
4.25e-174 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 504.56 E-value: 4.25e-174
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 8 YQKISFFLVNLMFIAGFTG-VFLSSEGTSIFFEW-FLGGSSVNFSMIFLLDSMSCFFLAVVLCISGNVVWYSKSYMALDP 85
Cdd:MTH00209 1 FKKMQMFSLMLLFLFSFLMfVIFMWFQKIVILEWeLLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 86 NANRFILLVLGFVASMAILILSPNILSILLGWDGLGLISYGLVIYYPSKKSSSAGMITVLSNRVGDVCILLSIAWFVSVG 165
Cdd:MTH00209 81 FKKRFILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSYLLVIYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 166 DFNFSIWAFynNVEFSNWVPLLVLLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSFILGET--C 243
Cdd:MTH00209 161 NWNIFYLNF--NSNLGSVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSpfF 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 244 SALLLFISIMTMFMSGVVAIFEYDLKKIIALSTLSQLGMMMFSISLGLYELAFFHLLTHALFKALLFLCAGILIHGAGNT 323
Cdd:MTH00209 239 SMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHS 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 324 QDIRSFGGLSLNFPLVTVCMNLANLSLCGVPFLAGFYSKDLIVELACQYSWGIFVLLMMFICLSLTVLYSVRLTYLSFVG 403
Cdd:MTH00209 319 QDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWG 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 404 PYGGGTSISVCESDYSLVGPVVILSFTSLVSGPILSWLNFPAPVLIFLPVFLKWGALFFVGVSLLVMLSLQGLTY-SYKW 482
Cdd:MTH00209 399 PNSSKSLNSSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKNFfLIKG 478
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 87083565 483 GAVSKFSGLMWFLPWLTGQGFSMKTLKNADHLLKIYDQGWLEFYSSKGLEVVGGKVNTLNLKFQHSSLK 551
Cdd:MTH00209 479 YKVNYFLSQMWFLPDLSSQPVNKFTMKLSKTMLKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLK 547
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
12-546 |
2.74e-169 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 492.05 E-value: 2.74e-169
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 12 SFFLVNLMFIAGFTGVFLSSEGTSIFFEWFLGG-SSVNFSMIFLLDSMSCFFLAVVLCISGNVVWYSKSYMALDPNANRF 90
Cdd:MTH00151 8 SFLLFSYSVFLFPLLGYFGLNGISLIFEWELLSvSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRF 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 91 ILLVLGFVASMAILILSPNILSILLGWDGLGLISYGLVIYYPSKKSSSAGMITVLSNRVGDVCILLSIAWFVSVGDFNF- 169
Cdd:MTH00151 88 MWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALVIYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLLGHWSIl 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 170 SIWAFYnnveFSNWVPLLVLLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSFILGETCSA--LL 247
Cdd:MTH00151 168 SMWDFK----LSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFssFL 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 248 LFISIMTMFMSGVVAIFEYDLKKIIALSTLSQLGMMMFSISLGLYELAFFHLLTHALFKALLFLCAGILIHGAGNTQDIR 327
Cdd:MTH00151 244 LFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIR 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 328 SFGGLSLNFPLVTVCMNLANLSLCGVPFLAGFYSKDLIVELACQYSWGIFVLLMMFICLSLTVLYSVRLTYLSFVGPYGG 407
Cdd:MTH00151 324 LLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKS 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 408 GTSISVCESDYSLVGPVVILSFTSLVSGPILSWLNFPAPVLIFLPVFLKWGALFFVGVSLLVMLSLQGLTYSYKWGAVSK 487
Cdd:MTH00151 404 SSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSFGFWDSGFSSSKMVKLS 483
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 488 -FSGLMWFLPWLTGQGFSMKTLKNADHLLKIYDQGWLEFYSSKGLEVVGGKVNTLNLKFQ 546
Cdd:MTH00151 484 fFFSSMWFLSPLSSQPLKSLSLKLSNSSMKSLDMGWLEILGGQGVFKANKSFSVLNESWP 543
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
7-550 |
2.36e-151 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 446.52 E-value: 2.36e-151
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 7 LYQKISFFLVNLMFIAGFTGVFLSSegtSIFFEWFL---GGSSVNFSMIFllDSMSCFFLAVVLCISGNVVWYSKSYMAL 83
Cdd:MTH00207 9 IASYLLWFMSILMFPLSLYLMMCNK---TILIEWEIftiSSSPINFTIIL--DPTGTLFSSTVLFISANVLLFAKTYMQE 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 84 DPNANRFILLVLGFVASMAILILSPNILSILLGWDGLGLISYGLVIYYPSKKSSSAGMITVLSNRVGDVCILLSIAWFVS 163
Cdd:MTH00207 84 DKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILVIYYQNPKSLGAGMITALTNRIGDVMLLLSIGWTLN 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 164 VGDFN-FSIWAfynnVEFSNWVPLLVLLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSFILGET 242
Cdd:MTH00207 164 QGHWSiTNMWQ----TDMNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSST 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 243 C--SALLLFISIMTMFMSGVVAIFEYDLKKIIALSTLSQLGMMMFSISLGLYELAFFHLLTHALFKALLFLCAGILIHGA 320
Cdd:MTH00207 240 YwfNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 321 GNTQDIRSFGGLSLNFPLVTVCMNLANLSLCGVPFLAGFYSKDLIVELACQYSWGIFVLLMMFICLSLTVLYSVRLTYLS 400
Cdd:MTH00207 320 HHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAV 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 401 FVGPYGGGTSISVCESDYSLVGPVVILSFTSLVSGPILSWLNFPAPVLIFLPVFLKWGALFFVGVSLLVMLSLQGLTYSY 480
Cdd:MTH00207 400 LWSPNSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEEPILPLQYKLLPLLVVTLGALLAWLFTTPNITK 479
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 87083565 481 KWGAVSK-----FSGLMWFLPWLTGQGFSMKTLKNADHLLKIYDQGWLEFYSSKGLEVVGGKVNTLNLKFQHSSL 550
Cdd:MTH00207 480 TPLLINNplshfASCLMWFLVPLSSQFIMSTPMNLSHNYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIP 554
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
6-551 |
4.29e-121 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 369.67 E-value: 4.29e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 6 YLYQKISFFLvnlMFIAGFTGVFLSSEGTSIFFEWFLGGSSvNFSMIFLLDSMSCFFLAVVLCISGNVVWYSKSYMALDP 85
Cdd:MTH00211 32 KKAVKLSFFI---SLIPLLIFLDQGLETILTNWSWINLGLF-SLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEP 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 86 NANRFILLVLGFVASMAILILSPNILSILLGWDGLGLISYGLVIYYPSKKSSSAGMIT-VLSNRVGDVCILLSIAWFVSV 164
Cdd:MTH00211 108 NINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQaVIYNRIGDIGLLLSMVWLLLN 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 165 GDfNFSIWAFYNNVEFSNWVPLLVLLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSFILGE--T 242
Cdd:MTH00211 188 LN-SWEISQLFILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNnqL 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 243 CSALLLFISIMTMFMSGVVAIFEYDLKKIIALSTLSQLGMMMFSISLGLYELAFFHLLTHALFKALLFLCAGILIHGAGN 322
Cdd:MTH00211 267 ILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNN 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 323 TQDIRSFGGLSLNFPLVTVCMNLANLSLCGVPFLAGFYSKDLIVELACQYSWGIFVLLMMFICLSLTVLYSVRLTYLSFV 402
Cdd:MTH00211 347 EQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLG 426
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 403 GPYGGGTSISVCESDYSLVGPVVILSFTSLVSGPILSWLNFPAPVLIF-LPVFLKWGALFFVGVSLLVMLSLQGLTYSYK 481
Cdd:MTH00211 427 GYPRFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEKPEILsLPFLLKLMPLLVTIVGLLLGLELVNLTHKQL 506
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 87083565 482 WGAVSKFSGLMWFLPWLTGQGFSMKTLKNADHL-LKIYDQGWLEFYSSKGLEVVGGKVNTLNLKFQHSSLK 551
Cdd:MTH00211 507 KTSTLSFSNMLGYYPPIIHRLLPKLSLKWGQTLsTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIK 577
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
11-471 |
1.91e-104 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 327.11 E-value: 1.91e-104
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 11 ISFFLVNLMFIAgftgvFLSSEGTSIFFEWF-LGGSSVNFSmiFLLDSMSCFFLAVVLCISGNVVWYSKSYMALDPNANR 89
Cdd:COG1009 40 AAFVLSLLLFPA-----VLGGEVVVELYTWIpVGSLGLDFG--FRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLAR 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 90 FILLVLGFVASMAILILSPNILSILLGWDGLGLISYGLVIYYPSKKSSS-AGMITVLSNRVGDVCILLSIAW-FVSVGDF 167
Cdd:COG1009 113 FFAYLLLFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARrAARKAFLVTRVGDLGLLLGILLlGAIAGTL 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 168 NFS-IWAFYNNVEFSNWVP---LLVLLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSFILGETC 243
Cdd:COG1009 193 NFSeLLAAAPTILSSPLLTlilLLLLLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSP 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 244 SALLLFISI--MTMFMSGVVAIFEYDLKKIIALSTLSQLGMMMFSISLGLYELAFFHLLTHALFKALLFLCAGILIHGAG 321
Cdd:COG1009 273 VWLTVVAIIgaITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATG 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 322 nTQDIRSFGGLSLNFPLVTVCMNLANLSLCGVPFLAGFYSKDLIVELACQY-SWGIFVLLMMFICLSLTVLYSVRLTYLS 400
Cdd:COG1009 353 -TRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAgGLGPLLLAVALLGAFLTAFYSFRLFFLV 431
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 87083565 401 FVGPYGGGTSISVCESDYSLVGPVVILSFTSLVSGPILSWL--NFPAPVLIFLPVFLKWGALFFVGVSLLVML 471
Cdd:COG1009 432 FFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLleGLLAPAAVLGGELHLAHGLLLNALPLLLSL 504
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
32-531 |
3.88e-98 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 310.17 E-value: 3.88e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 32 EGTSIFFEWFLGgSSVNFSMIFLLDSMSCFFLAVVLCISGNVVWYSKSYMALDPNANRFILLVLGFVASMAILILSPNIL 111
Cdd:MTH00004 60 ESITTNWPWIFT-TTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMF 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 112 SILLGWDGLGLISYGLVIYYPSK-KSSSAGMITVLSNRVGDVCILLSIAWFVSvgdfNFSIW----AFYNNVefSNWVPL 186
Cdd:MTH00004 139 QLFIGWEGVGIMSFLLIGWWSGRaEANTAALQAIIYNRIGDIGLILSMAWLAM----TLNTWeiqqLFSPTQ--TPTLPL 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 187 LVL-LAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSFILGETCSAL---LLFISIMTMFMSgVVA 262
Cdd:MTH00004 213 LGLiLAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALticLCLGALTTLFAA-TCA 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 263 IFEYDLKKIIALSTLSQLGMMMFSISLGLYELAFFHLLTHALFKALLFLCAGILIHGAGNTQDIRSFGGLSLNFPLVTVC 342
Cdd:MTH00004 292 LTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSC 371
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 343 MNLANLSLCGVPFLAGFYSKDLIVE-LACQY--SWgifVLLMMFICLSLTVLYSVRLTYLSFVGPYGGGTSISVCESDYS 419
Cdd:MTH00004 372 LTIGNLALMGTPFLSGFYSKDTIIEtLNTSYlnAW---ALLLTLLATSFTAAYSLRMILLVQTGFPRTPPTTPINENTPT 448
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 420 LVGPVVILSFTSLVSGPILSWLNFPA-PVLIFLPVFLKWGALFFVGVSLLVMLSLQGLTYSY---KWGAVSKFSGLMWFL 495
Cdd:MTH00004 449 IINPITRLALGSILAGLLISSTILPTkTPPMTMPTTTKLAALIVTILGILLALELSNMTTTLtppKQNTLHNFSNQLAFF 528
|
490 500 510 520
....*....|....*....|....*....|....*....|
gi 87083565 496 PWLTGQGFSMKTLKN----ADHLLkiyDQGWLEFYSSKGL 531
Cdd:MTH00004 529 NPLTHRLLPMTLLKSsqkiATHLI---DLSWLEKMGPKGL 565
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
10-531 |
5.65e-93 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 296.82 E-value: 5.65e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 10 KISFF--LVNLM-FIAgftgvfLSSEGTSIFFEWFLGGSSvNFSMIFLLDSMSCFFLAVVLCISGNVVWYSKSYMALDPN 86
Cdd:MTH00066 39 KTAFFisLIPLMiFIN------QGLESITTSFHWMNIFNF-NINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPK 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 87 ANRFILLVLGFVASMAILILSPNILSILLGWDGLGLISYGLVIYYPSK-KSSSAGMITVLSNRVGDVCILLSIAWFVSVG 165
Cdd:MTH00066 112 INRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHARaDANTAALQAVLYNRVGDIGLILSMAWLAMNT 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 166 ---DFNFsIWAFYNNvefsNWVPLLVL-LAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSFILGE 241
Cdd:MTH00066 192 nswELQQ-IFLLNDN----STLPLLGLiLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLEN 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 242 TCSAL--LLFISIMTMFMSGVVAIFEYDLKKIIALSTLSQLGMMMFSISLGLYELAFFHLLTHALFKALLFLCAGILIHG 319
Cdd:MTH00066 267 NQTALtiCLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHS 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 320 AGNTQDIRSFGGLSLNFPLVTVCMNLANLSLCGVPFLAGFYSKDLIVELACQYSWGIFVLLMMFICLSLTVLYSVRLTYL 399
Cdd:MTH00066 347 LNDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYF 426
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 400 SFVGPYGGGTSISVCESDYSLVGPVVILSFTSLVSGPILSWLNFPA-PVLIFLPVFLKWGALFFVGVSLLVMLSLQGLT- 477
Cdd:MTH00066 427 SSMKFPRSLPLSPINENNPLIINPIKRLAWGSIIAGLLIIFNILPMkPQILTMPTFMKLAALLVTLLGLLIALDLAKITs 506
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*
gi 87083565 478 YSYKWGAVSKFSGLMWFLPWLTGQGFSMKTLKNADHLLK-IYDQGWLEFYSSKGL 531
Cdd:MTH00066 507 KTTPKTKMHSFSNLLAFFPTIIHRLSPKTNLNSGQNIAThLTDMTWYEKSGPKGL 561
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
5-530 |
9.29e-90 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 289.18 E-value: 9.29e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 5 KYLYQKISFFLVNLMFIAGFTG----VFLSSEGTSI---FFEWFlGGSSVNFSMIFLLDSMSCFFLAVVLCISGNVVWYS 77
Cdd:MTH00208 49 IINYNNSNFSISLLKTLAFLSLinllIWILLGCPNInisLSNWL-SNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFS 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 78 KSYMALDPNANRFILLVLGFVASMAILILSPNILSILLGWDGLGLISYGLVIYYPSKKS-SSAGMITVLSNRVGDVCILL 156
Cdd:MTH00208 128 HYYMSNDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDaNSSALQAVIYNRIGDIGIIL 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 157 siawFVSVGDFNFSIWA----FYNNVEFSNWVPLL---VLLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGV 229
Cdd:MTH00208 208 ----FLSLSLINFNSWNlneiLSLNNSNSFLINILlfgILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGV 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 230 YLLIRFSFILG--ETCSALLLFISIMTMFMSGVVAIFEYDLKKIIALSTLSQLGMMMFSISLGLYELAFFHLLTHALFKA 307
Cdd:MTH00208 284 FLLIRTSPLISnsPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKA 363
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 308 LLFLCAGILIHGAGNTQDIRSFGGLSLNFPLVTVCMNLANLSLCGVPFLAGFYSKDLIVELACQYSWGIFVLLMMFICLS 387
Cdd:MTH00208 364 MLFLCSGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATL 443
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 388 LTVLYSVRLTYLSFVGPYGGGTSISVCESDYSLVGPVVILSFTSLVSGPILSWLNFPAPVlIFLPVFLKWGALF------ 461
Cdd:MTH00208 444 LTAVYSFRIIFFCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNLPP-LTLPLILKSLPLIvtiiga 522
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 462 FVGVSLLVMLSLQGLTYSYKWgavskFSGLMWFLPWLTGQGFSMKTLKNADHL-LKIYDQGWLEFYSSKG 530
Cdd:MTH00208 523 AFSFSFLLSLSSNPINSNFFS-----FLSNQWFFVNISHSIIISFSFFTSLFGsTRTLDRGWSENIGPQG 587
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
14-435 |
2.53e-89 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 287.64 E-value: 2.53e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 14 FLVNLMFIAGFTGVFLSSEGTSIFFEWF-LGGSSVNFSmiFLLDSMSCFFLAVVLCISGNVVWYSKSYMALDPNANRFIL 92
Cdd:TIGR01974 41 AALSAFVFVDFFLNGEGEAFTQSLFPWIsVGGFQVDFG--LRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFA 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 93 LVLGFVASMAILILSPNILSILLGWDGLGLISYGLVIYYPSKKS-SSAGMITVLSNRVGDVCILLSIAW-FVSVGDFNFS 170
Cdd:TIGR01974 119 YLNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSaNNAAIKAFVVNRVGDFGLLLGIFLiFWYFGTLNFQ 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 171 -IWAFYNNVEFS--NWVPLLVLLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSFI--LGETCSA 245
Cdd:TIGR01974 199 eVFALAPGAFFSalTLICLLLFIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLfeLSPTALY 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 246 LLLFISIMTMFMSGVVAIFEYDLKKIIALSTLSQLGMMMFSISLGLYELAFFHLLTHALFKALLFLCAGILIHGAGNTQD 325
Cdd:TIGR01974 279 LVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQD 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 326 IRSFGGLSLNFPLVTVCMNLANLSLCGVPFLAGFYSKDLIVELACQYSWGIFVLLMMFICLSLTVLYSVRLTYLSFVGPY 405
Cdd:TIGR01974 359 IRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKE 438
|
410 420 430
....*....|....*....|....*....|
gi 87083565 406 GGGTSISVCESDYSLVGPVVILSFTSLVSG 435
Cdd:TIGR01974 439 RHEADAHPHESPLVMLLPLIVLAVGSVFAG 468
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
28-471 |
4.25e-84 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 274.34 E-value: 4.25e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 28 FLSSEGTSI---FFEWF-LGGSSVNFSmiFLLDSMSCFFLAVVLCISGNVVWYSKSYMALDPNANRFILLVLGFVASMAI 103
Cdd:PRK06590 53 FLLGGGRAFsqtLWTWIsVGDFDVDFG--LRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLM 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 104 LILSPNILSILLGWDGLGLISYGLVIYYPSKKSSS-AGMITVLSNRVGDVCILLSIAW-FVSVGDFNFS------IWAFY 175
Cdd:PRK06590 131 LVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPSAGaAAMKAFIVNRVGDVGLALGIFLlFAEFGSLNYDevfaaaPQFFG 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 176 NNVEFSNWVPLLVLLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFS--FILGETCSALLLFISIM 253
Cdd:PRK06590 211 LGWSALTLICLLLFIGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSplFELSPEALLFVAIVGAV 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 254 TMFMSGVVAIFEYDLKKIIALSTLSQLGMMMFSISLGLYELAFFHLLTHALFKALLFLCAGILIHGAGNTQDIRSFGGLS 333
Cdd:PRK06590 291 TALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLR 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 334 LNFPLVTVCMNLANLSLCGVPFLAGFYSKDLIVELAcqYSWG-IFVLLMMFICLSLTVLYSVRLTYLSFVGPYGGGTSiS 412
Cdd:PRK06590 371 KKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEAA--FANGhINLFVAGLVGAFLTAFYSFRLIFLVFHGKEKEKIH-H 447
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 87083565 413 VCESDYSLVGPVVILSFTSLVSG-----PILSWLNFPAPVLIFLPVFlkWGALFFVGVSLLVML 471
Cdd:PRK06590 448 PHESPAVMTLPLIVLAVLSVFAGalivpPFLGVLPLTTELAHGEAEH--HLPVWVALLPLVVAL 509
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
46-524 |
1.83e-83 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 272.11 E-value: 1.83e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 46 SVNFSMIFLLDSMSCFFLAVVLCISGNVVWYSKSYMALDPNANRFILLVLGFVASMAILILSPNILSILLGWDGLGLISY 125
Cdd:MTH00108 73 TLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSF 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 126 gLVI--YYPSKKSSSAGMITVLSNRVGDVCILLSIAWFVsvgdFNFSIW----AFYNNVEFSNwVPLL-VLLAAMTKSAQ 198
Cdd:MTH00108 153 -LLIgwWYGRTDANTAALQAILYNRIGDIGFILAMAWFL----LNLNSWdlqqIFMLNPNNSN-LPLMgLLLAATGKSAQ 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 199 IPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRF-------SFILgetcSALLLFISIMTMFMSgVVAIFEYDLKKI 271
Cdd:MTH00108 227 FGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFhplmennKTIQ----TLTLCLGAITTLFTA-ICALTQNDIKKI 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 272 IALSTLSQLGMMMFSISLGLYELAFFHLLTHALFKALLFLCAGILIHGAGNTQDIRSFGGLSLNFPLVTVCMNLANLSLC 351
Cdd:MTH00108 302 VAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALT 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 352 GVPFLAGFYSKDLIVELACQYSWGIFVLLMMFICLSLTVLYSVRLTYLSFVGPYGGGTSISVCESDYSLVGPVVILSFTS 431
Cdd:MTH00108 382 GMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGS 461
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 432 LVSGPILSwLNFP--APVLIFLPVFLKWGALFFVGVSLLVMLSLQGLTYSYKWGAVS---KFSGLMWFLPWLTGQGFSMK 506
Cdd:MTH00108 462 IFAGFLIS-NNIPptTIPQMTMPLYLKLTALAVTILGFILALELNLLTNNLKFKYPSntfKFSNMLGYFPTIMHRLPPYM 540
|
490
....*....|....*....
gi 87083565 507 TLKNADHL-LKIYDQGWLE 524
Cdd:MTH00108 541 NLTMSQKLaSMLLDLIWLE 559
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
46-463 |
7.76e-78 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 257.31 E-value: 7.76e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 46 SVNFSMIFllDSMSCFFLAVVLCISGNVVWYSKSYMALDPNANRFILLVLGFVASMAILILSPNILSILLGWDGLGLISY 125
Cdd:MTH00020 71 TVYFGLQF--DGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSY 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 126 GLVIYYPSK-KSSSAGMITVLSNRVGDVCILLSIawfvsvgdfnFSIWAFYNNVEFSN--------------WVPLLVLL 190
Cdd:MTH00020 149 LLINFWLTRiEANKAAIKAMLVNRVGDIGLLLAM----------FLLWDRFGSLDFSSvfnmvvsapssditLICLFLFI 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 191 AAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSFILGETCSALLLFISI--MTMFMSGVVAIFEYDL 268
Cdd:MTH00020 219 GAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVgsLTVFFAATVGLVQNDL 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 269 KKIIALSTLSQLGMMMFSISLGLYELAFFHLLTHALFKALLFLCAGILIHGAGNTQDIRSFGGLSLNFPLVTVCMNLANL 348
Cdd:MTH00020 299 KKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSL 378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 349 SLCGVPFLAGFYSKDLIVELACQYSWGIFVLLMMFICLSLTVLYSVRLTYLSFVGPYGG--GTSISVCESDYSLVGPVVI 426
Cdd:MTH00020 379 SLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTNLkkAVFFHLHEGDWNLLLPLGI 458
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 87083565 427 LSFTSLVSGPILSWL------NFPAPVLIF---LPVFLKWGALFFV 463
Cdd:MTH00020 459 LALGSIFVGYLAKEMiwsfqiTLPPIVPLSiklLPVFLSLGGIGLV 504
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
47-477 |
2.71e-73 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 245.13 E-value: 2.71e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 47 VNFSMIFllDSMSCFFLAVVLCISGNVVWYSKSYMALDPNANRFILLVLGFVASMAILILSPNILSILLGWDGLGLISYg 126
Cdd:MTH00137 80 INISFKF--DHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSF- 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 127 LVI--YYPSKKSSSAGMITVLSNRVGDVCILLSIAWFVSvgdfNFSIWA----FYNNVEFSNWVPLLVL-LAAMTKSAQI 199
Cdd:MTH00137 157 LLIgwWYGRADANTAALQAVIYNRVGDIGLILAMAWMAT----NLNSWEiqqiFALSKDFDLTLPLLGLiLAATGKSAQF 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 200 PFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSFILGETCSAL--LLFISIMTMFMSGVVAIFEYDLKKIIALSTL 277
Cdd:MTH00137 233 GLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALttCLCLGALTTLFTATCALTQNDIKKIVAFSTS 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 278 SQLGMMMFSISLGLYELAFFHLLTHALFKALLFLCAGILIHGAGNTQDIRSFGGLSLNFPLVTVCMNLANLSLCGVPFLA 357
Cdd:MTH00137 313 SQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLA 392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 358 GFYSKDLIVE-LACQY--SWGifvLLMMFICLSLTVLYSVRLTYLSFVGPYGGGTSISVCESDYSLVGPVVILSFTSLVS 434
Cdd:MTH00137 393 GFFSKDAIIEaLNTSHlnAWA---LTLTLIATSFTAVYSLRVVFFVSMGHPRFNPLSPINENNPAVINPIKRLAWGSIIA 469
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 87083565 435 GPILSwLNFP---APVLIfLPVFLKWGALFFVGVSLLVMLSLQGLT 477
Cdd:MTH00137 470 GLLIT-SNILplkTPVMT-MPPLLKLAALIVTILGLLIALELASLT 513
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
56-493 |
7.38e-72 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 241.45 E-value: 7.38e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 56 DSMSCFFLAVVLCISGNVVWYSKSYMALDPNANRFILLVLGFVASMAILILSPNILSILLGWDGLGLISYGLVIYYPSK- 134
Cdd:MTH00210 79 DSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLINFWLTRi 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 135 KSSSAGMITVLSNRVGDvcILLSIAWFVSVGDFN-------FSIWAFYNNVEFSNWVPLLVLLAAMTKSAQIPFSAWLPA 207
Cdd:MTH00210 159 KANKAAIKAMLINRVGD--IGLVLAMIMILKEFGtlefstiSSLLVTNINKESLTIICLLLFIGAVGKSAQLGLHTWLPD 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 208 AMAAPTPVSALVHSSTLVTAGVYLLIRfSFILGETCSALLLFISI---MTMFMSGVVAIFEYDLKKIIALSTLSQLGMMM 284
Cdd:MTH00210 237 AMEGPTPVSALIHAATMVTAGVFLIIR-SGPLFEGSPLALTIVTIlgaLTAFFAATVGVVQNDLKKVIAYSTCSQLGYMV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 285 FSISLGLYELAFFHLLTHALFKALLFLCAGILIHGAGNTQDIRSFGGLSLNFPLVTVCMNLANLSLCGVPFLAGFYSKDL 364
Cdd:MTH00210 316 MVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDL 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 365 IVELAC-QYSWGIFVLLMMFICLsLTVLYSVRLTYLSFVGPYGG--GTSISVCESDYSLVGPVVILSFTSLVSGPILSWL 441
Cdd:MTH00210 396 ILELTYdKYYIAFAYWLGSFSAL-LTAFYSIRLIYLTFITNTNSkkEVFIGVHESSWNITFPLLLLAFGSIFVGYLGKEV 474
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 87083565 442 NFPAPVLIFLPVFLKWGALFFvgvSLLVMLsLQGLTYSYKWGAVSKFSGLMW 493
Cdd:MTH00210 475 VLSNVIPPIVPNSIKMIPLLF---SLLGAL-LAFVIYNSMVFLIKISRRGVS 522
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
13-403 |
7.86e-72 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 239.05 E-value: 7.86e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 13 FFLVNLMFIAGFTGVFLSSEGTSIFFewflgGSSVNFSMIFLLDSMSCFFLAVVLCISGNVVWYSKSYMALDPNANRFIL 92
Cdd:MTH00095 6 FLILFFFFFLLLFILFLPFMKLNLFF-----LEWDFLSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 93 LVLGFVASMAILILSPNILSILLGWDGLGLISYGLVIYYPSKKSSSAGMITVLSNRVGDVCILLSIAWFVSVGDFNFSIw 172
Cdd:MTH00095 81 VLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLVLFYNNWDSNSGAMNTALTNRIGDFFIFLFFSGFIFSSYYFFSF- 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 173 afynnVEFSNWVPLLVLLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSF-ILGETCSALLLFIS 251
Cdd:MTH00095 160 -----SFFSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYlILNMNVMKIMLLIG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 252 IMTMFMSGVVAIFEYDLKKIIALSTLSQLGMMMFSISLGLYELAFFHLLTHALFKALLFLCAGILIHGAGNTQDIRSFGG 331
Cdd:MTH00095 235 LFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSN 314
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 87083565 332 LSLNFPLVTVCMNLANLSLCGVPFLAGFYSKDLIVELACQYSWGIFVLLMMFICLSLTVLYSVRLTYLSFVG 403
Cdd:MTH00095 315 NGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFLS 386
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
38-407 |
5.39e-64 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 221.82 E-value: 5.39e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 38 FEWFLGGSsVNFSMIFLLDSMSCFFLAVVLCISGNVVWYSKSYMALDPNANRFILLVLGFVASMAILILSPNILSILLGW 117
Cdd:PRK07376 73 FEWASAGD-FHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFW 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 118 DGLGLISYGLV-IYYPSKKSSSAGMITVLSNRVGDVCILLSI-AWFVSVGDFNFSIWA-----FYNNVEFSNWVPL---- 186
Cdd:PRK07376 152 ELVGMCSYLLVgFWYDRKGAADAAQKAFVVNRVGDFGLLLGIlGLFWATGSFDFDGIAdrlseLVSSGAVSGWLALllci 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 187 LVLLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFsFILGETCSALLLFISI---MTMFMSGVVAI 263
Cdd:PRK07376 232 LVFLGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARM-YPVFEQFPAVMTVIAWtgaITAFLGASIAL 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 264 FEYDLKKIIALSTLSQLGMMMFSISLGLYELAFFHLLTHALFKALLFLCAGILIHGAGNT--------QDIRSFGGLSLN 335
Cdd:PRK07376 311 TQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEVvghdpvlaQDMRLMGGLRKY 390
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 87083565 336 FPLVTVCMNLANLSLCGVPFLAGFYSKDLIVELACQYS---WGIfvllmMFICLSLTVLYSVRLTYLSFVGPYGG 407
Cdd:PRK07376 391 MPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANpalWFV-----GFLTAGMTAFYMFRMYFLTFEGEFRG 460
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
53-368 |
7.93e-56 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 199.41 E-value: 7.93e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 53 FLLDSMSCFFLAVVLCISGNVVWYSKSYMALDPNANRFILLVLGFVASMAILILSPNILSILLGWDGLGLISYGLVIYYP 132
Cdd:MTH00032 76 LLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWT 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 133 SK-KSSSAGMITVLSNRVGDVCILLSIAW-FVSVGDFNFSIW-------------AFYNNVEFSNWVP-----LLVLLAA 192
Cdd:MTH00032 156 TRiQANKAAIKAIVVNRVGDVGVILGMVLiYKTIGSLDFLTFnggsvgsgimdrgYYGGGAYESPLAPfaiigILLLIGC 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 193 MTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRfSFILGETCSALLLFISI---MTMFMSGVVAIFEYDLK 269
Cdd:MTH00032 236 IGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIR-SFPLFEKAPLTLLIITIfgaLTAFFAATVGLVQNDLK 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 270 KIIALSTLSQLGMMMFSISL-GLYELAFFHLLTHALFKALLFLCAGILIHGAG-NTQDIRSFGGLSLNFPLVTVCMNLAN 347
Cdd:MTH00032 315 KVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGS 394
|
330 340
....*....|....*....|.
gi 87083565 348 LSLCGVPFLAGFYSKDLIVEL 368
Cdd:MTH00032 395 FSIMGLPYLTGFYSKDLILEL 415
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
42-445 |
1.77e-54 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 198.73 E-value: 1.77e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 42 LGGSSVNFSMIFLLDSMSCFFLAVVLCISGNVVWYSKSYMALDPNANRFILLVLGFVASMAILILSPNILSILLGWDGLG 121
Cdd:PRK12650 64 LLGNGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVS 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 122 LISYGLVIYypSKKSSSAGMI-TVLSNRVGDVCILLSIAWFVSV-GDFNFS------IWAfyNNVEFSNWVPLLVLLAAM 193
Cdd:PRK12650 144 LASFFLIAR--SGSGGEAGSIrTLILTFFGGLTLLAAVAIAATQtGTTSLSgilhsdVWA--EKPGLTTVVAVLIAVAAF 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 194 TKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSFILGE--TCSALLLFISIMTMFMSGVVAIFEYDLKKI 271
Cdd:PRK12650 220 TKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDvaVWNWLLIIVGMITALMGAVFAVQKTDLKKL 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 272 IALSTLSQLGMMMFSISLGL-YEL--AFFHLLTHALFKALLFLCAGILIHGAGnTQDIRSFGGLSLNFPLVTVCMNLANL 348
Cdd:PRK12650 300 TAYSTVSQLGWIVATIGVGTpFALtaAVVHTLAHALFKSSLFMLIGVVDHQAG-TRDIRRLGSLWRRMPFTFVSVTIAAL 378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 349 SLCGVPFLAGFYSKDLIVELACQY---SWGIFVLLM-MFICLSLTVLYSVRLTYLSFV-GPYGGGTsisVCESDYSLVGP 423
Cdd:PRK12650 379 SMAAVPPLFGFVSKEGMLTAFLEApggNAGVVLLLVgAALGAVFTFAYSARLVLGAFVdGPRDMSH---VKEAPVSLWLP 455
|
410 420
....*....|....*....|..
gi 87083565 424 VVILSFTSLVSGPILSWLNFPA 445
Cdd:PRK12650 456 AALPGALSLPLGLVPGLLDAPV 477
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
19-404 |
2.43e-52 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 190.90 E-value: 2.43e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 19 MFIAGFTGVFLSSEGTSIFFEWFlggSSVNFSMIFLLDSMSCFFlavVLCISG---NVVWYSKSYMALDPNANRFILLVL 95
Cdd:PRK12647 29 LYFLSFIPEIAAGETVRGGYAWV---PSLGVNLSFLLDGLSLTF---ALLITGigtLIVLYAGGYLKGHPDLGRFYSYIL 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 96 GFVASMAILILSPNILSILLGWDGLGLISYGLVIY-YPSKKSSSAGMITVLSNRVGDVCIL--LSIAWFVSvGDFNFS-I 171
Cdd:PRK12647 103 LFMASMLGLVLSDNLITLFVFWELTSITSFLLIGFnHEREAARRAALQALLVTGGGGLALLagLILLGNVT-GTYSLSeL 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 172 WAFYNNVEFSNWVP---LLVLLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSFILGETC--SAL 246
Cdd:PRK12647 182 LASGDVIREHPLYLailLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPlwQTI 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 247 LLFISIMTMFMSGVVAIFEYDLKKIIALSTLSQLGMMMFSISLGL---YELAFFHLLTHALFKALLFLCAGILIHGAGnT 323
Cdd:PRK12647 262 LPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGSelaIKAAVLFLVAHSLYKGALFMVAGIIDHETG-T 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 324 QDIRSFGGLSLNFPLVTVCMNLANLSLCGVPFLAGFYSKDLIVELACQY-SWGIFVLLMMFICLSLTVLYSVRLTYLSFV 402
Cdd:PRK12647 341 RDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEALLEApLWSLILTVAAVLGNALMVAVAFLVGIKPFL 420
|
..
gi 87083565 403 GP 404
Cdd:PRK12647 421 GK 422
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
42-396 |
9.86e-52 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 183.04 E-value: 9.86e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 42 LGGSSVNFSMIFLLDSMSCFFLAVVLCISGNVVWYSKSYMALDPNANRFILLVLGFVASMAILILSPNILSILLGWDGLG 121
Cdd:COG0651 61 LGGWPAPFGIVLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVML 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 122 LISYGLVIYYPSKKSSSAGMITVLSNRVGDVCILLSIAW-FVSVGDFNFSIWAFYNNVEFSNWVP---LLVLLAAMTKSA 197
Cdd:COG0651 141 LASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLlYGATGTLNMADLAARLAELDPGLLLaafALLLVGFGIKAA 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 198 QIPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSFIL-----GETCSALLLFISIMTMFMSGVVAIFEYDLKKI 271
Cdd:COG0651 221 LFPLHFWLPDAYPaAPSPVSALL-SGLLTKVGVYAILRVLTLLfgadpALFLGTLLLVLGLLTMLVGALGALAQRDLKRL 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 272 IALSTLSQLGMMMFSISLGLYEL---AFFHLLTHALFKALLFLCAGILIHGAGnTQDIRSFGGLSLNFPLVTVCMNLANL 348
Cdd:COG0651 300 LAYSSVSQIGYILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERATG-TRDLDKLGGLGKRMPLTAAAFLIGAL 378
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 87083565 349 SLCGVPFLAGFYSKDLIVELACQYSWGIFVLLMMFICLsLTVLYSVRL 396
Cdd:COG0651 379 ALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSL-LTLAYFVRI 425
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
107-383 |
3.09e-50 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 174.81 E-value: 3.09e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 107 SPNILSILLGWDGLGLISYGLVIYYP-SKKSSSAGMITVLSNRVGDVCILLSIAW-FVSVGDFNFSIWAFYNNVEFSNW- 183
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGkSPRSSEAGMKYFLLTLLGSSILLFGISLmYNYTGTLSFDELSKALTGGLNSSg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 184 ---VPLLVLLAAMTKSAQIPFSAWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSFIL---GETCSALLLFISIMTMF 256
Cdd:pfam00361 81 lllLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYlpsSPFIQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 257 MSGVVAIFEYDLKKIIALSTLSQLGMMMFSISLGL---YELAFFHLLTHALFKALLFLCAGILIHGAGNTQDIRSFGGLS 333
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTiygIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 87083565 334 LNFPLVTVCMNLANLSLCGVPFLAGFYSKDLIVELACQYSWGIFVLLMMF 383
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVV 289
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
41-396 |
8.03e-50 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 180.07 E-value: 8.03e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 41 FLGGSSVNFSMIFLLDSMSCFFLAVVLCISGNVVWYSKSYMALDPNANRFILLVLGFVASMAILILSPNILSILLGWDGL 120
Cdd:MTH00063 29 FLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKLIVLFVLVMGILVLTGDFLSTLIFWEYL 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 121 GLISYGLVIYYPSKKSSSAGMITVLSNRVGDVCILLSIAWFVSVGDFNFsiwafynnvefsnWVPLLVLLAAMTKSAQIP 200
Cdd:MTH00063 109 GVVSFFLILFYDNFLSLRASVVTLVSSRFGDVCLFLLIGLSCWGGSGSF-------------LCCLFFFLIVFTKSASFP 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 201 FSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSFILGETCSALLLFI-SIMTMFMSGVVAIFEYDLKKIIALSTLSQ 279
Cdd:MTH00063 176 FISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIFFSVlLLLTIFITGVSSLFFSDLKKIVALSTCNN 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 280 LGMMMFSISLGLYELAFFHLLTHALFKALLFLCAGILIHGAGNTQDIR-----SFGGLSLNFPLVTVCmnlanLSLCGVP 354
Cdd:MTH00063 256 ISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNcvyssILYGSWNLFYLFLLV-----LGLSGVP 330
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 87083565 355 FLAGFYSKDLIVELACQYSWGIFVLLMMFICLSLTVLYSVRL 396
Cdd:MTH00063 331 FIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRL 372
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
45-405 |
1.94e-49 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 183.03 E-value: 1.94e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 45 SSVNFSMIFLLDSMSCFFLAVVLCISGNVVWYSKSYMALD-PNANRFILLVLGFVASMAILILSPNILSILLGWDGLGLI 123
Cdd:PRK12646 66 KTLDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLSSRkDNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVS 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 124 SYGLVIYYPSKKSSSAG-----MITVLsnrvGDVCILLSIAWFVSVGDFN--FSIWAFYNNVEFSNWVP---LLVLLAAM 193
Cdd:PRK12646 146 SFLLISYWYNNGDSQFGaiqsfMITVF----GGLALLVGFIMLYIMTGTNniTEILGQADHIKNHGLFIpmiFMFLLGAF 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 194 TKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSFILGETCSAL--LLFISIMTMFMSGVVAIFEYDLKKI 271
Cdd:PRK12646 222 TKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIyiVTFVGLITMLFGSITALKQWDLKGI 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 272 IALSTLSQLGMMMFSISLG-------------LYEL----AFFHLLTHALFKALLFLCAGILIHGAGnTQDIRSFGGLSL 334
Cdd:PRK12646 302 LAYSTISQLGMIMAMVGIGggyaqhqqdaiasIYVFvlfaALFHLMNHAIFKCALFMGVGIIDHEAG-TRDIRILSGMRQ 380
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 87083565 335 NFPLVTVCMNLANLSLCGVPFLAGFYSKDLIVE-LACQYSWGIFVLLMMFICLS-------LTVLYSVRLTYLSFVGPY 405
Cdd:PRK12646 381 LFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDaLTQTGQLSQFSLISMIIIVFigviasiFTFTYALYMVKEVFWGKY 459
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
53-442 |
2.92e-48 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 180.51 E-value: 2.92e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 53 FLLDSMSCFFLAVVLCISGNVVWYSKSYMALD-PNANRFILLVLGFVASMAILILSPNILSILLGWDGLGLISYGLVIYY 131
Cdd:PRK12644 70 FRLDALAALMSLLVLGVGALVLLYCARYFDDDePRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIGHY 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 132 PSKKSS-----SAGMITV---LSNRVGdvCILLSiawfVSVGDFNFS-IWAFYNNVEFSNWVPLLVLLAAMTKSAQIPFS 202
Cdd:PRK12644 150 AERAASrraalQALLVTTaggLAMLVG--IIILG----QAAGTYRLSeLLADPPTGPAVSVAVVLILVGALSKSAIVPFH 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 203 AWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSFILGETCS--ALLLFISIMTMFMSGVVAIFEYDLKKIIALSTLSQL 280
Cdd:PRK12644 224 FWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVwrPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQL 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 281 GMMMFSISLGLYELAFFHL---LTHALFKALLFLCAGILIHGAGnTQDIRSFGGLSLNFPLVTVCMNLANLSLCGVPFLA 357
Cdd:PRK12644 304 GFLTVLVGIGTRDAALAGLamlLAHALFKAALFLVVGIIDHSTG-TRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLL 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 358 GFYSKDL----IVELACQYSWGIFVLLMMFICLSLTVLYSVRLTYLSFVGPYGGGTSISVCESD---YSLVGPVVILSFT 430
Cdd:PRK12644 383 GFVAKEAaleaVLHDGALGPAGPVVLAGIVLGSILTVAYSLRFLWGAFARKPGAFPSVAVTEMHrpsPLFLAPPAVLAVL 462
|
410
....*....|..
gi 87083565 431 SLVSGPILSWLN 442
Cdd:PRK12644 463 GLVLGLLPAPLD 474
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
27-384 |
1.89e-47 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 172.47 E-value: 1.89e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 27 VFLSSEGTSIFFEWFLGGSSVNFSmiFLLDSMSCFFLAVVLCISGNVVWYSKSYMA-------LDPNANRFILLVLGFVA 99
Cdd:PRK06525 47 AFYQAGKVAVTLTLVNLGDVALFG--LVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIG 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 100 SMAILILSPNILSILLGWDGLGLISYGLVIYYPSKKSSSAGMITVLSNRVGDVCILLSIAW-FVSVGDFNFSIWAFYNNv 178
Cdd:PRK06525 125 AMAGLVYSSTLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATlFLQTGTFALSALSGLHG- 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 179 EFSNWVPLLVLLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSFILGETCSALLLFISIM---TM 255
Cdd:PRK06525 204 SLKYLVFLGILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMaivTL 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 256 FMSGVVAIFEYDLKKIIALSTLSQLGMMMFSISLGLY------ELAFFHLLTHALFKALLFLCAGILIHGAGnTQDIRSF 329
Cdd:PRK06525 284 LYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAILgsrlalEGSIAYIFNHAFAKSLFFLVAGALSYSCG-TRLLPRL 362
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 87083565 330 GGLSLNFPLVTVCMNLANLSLCGVPFLAGFYSKDLIV----ELACQYSWGIFVLLMMFI 384
Cdd:PRK06525 363 RGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFaagfELSVEYWILLPAMVLLLI 421
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
47-404 |
5.00e-46 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 173.84 E-value: 5.00e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 47 VNFSmiFLLDSMSCFFLAVVLCISGNVVWYSKSYMALDPNANRFILLVLGFVASMAILILSPNILSILLGWDGLGLISYG 126
Cdd:PRK12648 68 LNLS--LRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 127 LVIYYPSKKSSSAG--M-ITVLSnrVGDVCIL---LSIAWFVsvGDFNFS-IWAFYNNVEFSNWVP---LLVLLAAMTKS 196
Cdd:PRK12648 146 LIGYWHHRADARRGarMaLTVTG--AGGLALLagvLLLGHIV--GSYDLDvVLAAGDLIRAHPLYPpalVLILLGAFTKS 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 197 AQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSFILGETCSALLL--FISIMTMFMSGVVAIFEYDLKKIIAL 274
Cdd:PRK12648 222 AQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIvgGAGLITLLLGAYFALFQHDLKGLLAY 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 275 STLSQLGM--MMFSISLGLYELA-FFHLLTHALFKALLFLCAGILIHGAGnTQDIRSFGGLSLNFPLVTVCMNLANLSLC 351
Cdd:PRK12648 302 STISHLGLitLLLGLGSPLAAVAaIFHIINHATFKASLFMAAGIIDHETG-TRDMRRLSGLRRLMPITATLAMVAAAAMA 380
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 87083565 352 GVPFLAGFYSKDLIVELACQYSWG----IFVLLMMFICLSLTVLYSVRLTYLSFVGP 404
Cdd:PRK12648 381 GVPLLNGFLSKEMFFAETLDTHLLgsldWLLPVAATLAGAFSVAYSLRFIHDVFFGP 437
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
55-405 |
4.93e-43 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 164.63 E-value: 4.93e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 55 LDSMSCFFLAVVLCISGNVVWYSKSYMALDPNANRFILLVLGFVASMAILILSPNILSILLGWDGLGLISYGLVIYYPSK 134
Cdd:TIGR00940 73 MDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHR 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 135 KSSSAGMITVLSNRVGDVCILLSIAWFVSVGDFNFSIWAFYN------NVEFSNWVPLLVLLAAMTKSAQIPFSAWLPAA 208
Cdd:TIGR00940 153 AHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIDAVIAsadairNSPLFGTAMVLVLLGAFTKSAQFPFHIWLPDA 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 209 MAAPTPVSALVHSSTLVTAGVYLLIRFSFILGETCS--ALLLFISIMTMFMSGVVAIFEYDLKKIIALSTLSQLGMMMFS 286
Cdd:TIGR00940 233 MEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAwfWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVL 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 287 ISLG------------LYELAF----FHLLTHALFKALLFLCAGILIHGAGnTQDIRSFGGLSLNFPLVTVCMNLANLSL 350
Cdd:TIGR00940 313 LGLGspsyhyqgddskIYALAAvaavFHLINHATFKGSLFMAAGIIDHETG-TRDIRKLGGLFHIMPITFTLAMIASAAM 391
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 87083565 351 CGVPFLAGFYSKDLIVELACQYS---------WGIFVLLMMFICLSLTVLYSVRLTYLSFVGPY 405
Cdd:TIGR00940 392 AGVPPFNGFLSKEMFFAEAITAHlvnpfdtvtLGYLFPYVATVASVFTFVYSLRFIHGVFFGRP 455
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
53-373 |
5.78e-42 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 160.83 E-value: 5.78e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 53 FLLDSMSCFFLAVVLCISGNVVWYSKSYMALDPNANRFILLVLGFVASMAILILSPNILSILLGWDGLGLISYGLVIYYP 132
Cdd:CHL00025 87 YLIDPLTSIMLILITTVGILVLIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWF 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 133 SKKS-SSAGMITVLSNRVGDVCILLSIAWFVSV-GDFNFSIWA--FYN-------NVEFSNWVPLLVLLAAMTKSAQIPF 201
Cdd:CHL00025 167 TRPIaANACQKAFVTNRVGDFGLLLGILGFYWItGSFEFRDLFeiFNNliynnevNLLFATLCAFLLFLGPVAKSAQFPL 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 202 SAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFsFILGETCSALLLFIS---IMTMFMSGVVAIFEYDLKKIIALSTLS 278
Cdd:CHL00025 247 HVWLPDAMEGPTPISALIHAATMVAAGIFLVARL-LPLFIVIPYIMNLISligIITALLGATLALAQKDIKRGLAYSTMS 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 279 QLGMMMFSISLGLYELAFFHLLTHALFKALLFLCAGILIHG--------AGNTQDIRSFGGLSLNFPLVTVCMNLANLSL 350
Cdd:CHL00025 326 QLGYMMLALGIGSYRAALFHLITHAYSKALLFLGSGSVIHSmepivgysPDKSQNMVLMGGLRKYMPITKTTFLLGTLSL 405
|
330 340
....*....|....*....|...
gi 87083565 351 CGVPFLAGFYSKDLIVELACQYS 373
Cdd:CHL00025 406 CGIPPLACFWSKDEILNDSWLYS 428
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
55-405 |
9.89e-41 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 157.78 E-value: 9.89e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 55 LDSMSCFFLAVVLCISGNVVWYSKSYMALDPNA-NRFILLVLGFVASMAILILSPNILSILLGWDGLGLISYGLVIYYPS 133
Cdd:PRK12645 76 VDGLSLLFALLITGIGSLVVLYSIYYLSKKKEQlGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYE 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 134 KKSSSAG-----MITVLsnrvGDVCILLSIAWFVSVGDfNFSIWAFYNNVE------FSNWVPLLVLLAAMTKSAQIPFS 202
Cdd:PRK12645 156 REASRYGaqksmLITVF----GGLSMLGGFILLYIMTG-SFSIREMIANADeiqnspLFIPAMILILLGAFTKSAQFPFY 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 203 AWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFS--FILGETCSALLLFISIMTMFMSGVVAIFEYDLKKIIALSTLSQL 280
Cdd:PRK12645 231 IWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTpiFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQL 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 281 GMMMFSISLG------------LYELAF----FHLLTHALFKALLFLCAGILIHGAGnTQDIRSFGGLSLNFPLVTVCMN 344
Cdd:PRK12645 311 GLIMSLLGIGaaslhyqgddskIYAAAItaaiFHLINHATFKGSLFMIVGIVDHETG-TRDIRKLGGLMTIMPITFTIAL 389
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 345 LANLSLCGVPFLAGFYSKDLIVELACQYS---------WGIFVLLMMFICLSLTVLYSVRLTYLSFVGPY 405
Cdd:PRK12645 390 IGALSMAGLPPFNGFLSKEMFFESMLNATeanlfsldtWGVLFPVIAWVASVFTFVYSIIFIFKTFFGKY 459
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
46-403 |
1.09e-37 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 148.82 E-value: 1.09e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 46 SVNFSMIFLLDSMSCFFLAVVLCISGNVVWYSKSYMALDPNANRFILLVLGFVASMAILILSPNILSILLGWDGLGLISY 125
Cdd:PRK12649 69 SAGVEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSF 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 126 GLVIYYPSKKSSSAGMITVLSNRVGDVCILLSIAWFVSVGDFNFSIWAFYNNVEFSNWVP---------LLVLLAAMTKS 196
Cdd:PRK12649 149 MLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIENIKghplflitlILIFIGAAAKS 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 197 AQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSFILGETCSALLLF--ISIMTMFMSGVVAIFEYDLKKIIAL 274
Cdd:PRK12649 229 AQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVsgTGMITMVLAGFLAFRQTDIKAILAY 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 275 STLSQLGMMMFSISLGLYE-------LAFFHLLTHALFKALLFLCAGILIHGAGnTQDIRSFGGLSLNFPLVTVCMNLAN 347
Cdd:PRK12649 309 STISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAHEAA-TRDIRKLGGLRKEMPITFIVASIAA 387
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 87083565 348 LSLCGVPFLAGFYSKDLIVELACQ------YSWGIFVLLMMFICLSLTVLYSVRLTYLSFVG 403
Cdd:PRK12649 388 LAMAGIPPLNGFLSKEMFYETSVEmgaligGPFTIIIPAVAVLGGVFTFAYSIKLIDGIFLG 449
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
11-449 |
8.77e-34 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 134.24 E-value: 8.77e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 11 ISFFLVNLMFIAGFTGVFLSSEGTSIFFEwfLGGSSVNFSMIFLLDSMSCFFLAVVLCISGNVVWYSKSYMalDPNANRF 90
Cdd:PRK08375 33 LALLVAALTFALAISLLPQVLDGGVIAYV--VGGWPPGIGIELRADSLSALFLLVTSILAIAALLYAIGYG--EHRQTRF 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 91 ILLVLGFVASMAILILSPNILSILLGWDGLGLISYGLVIYYPSKKSSSAGMITVLSNRVGDVCILLSIAW-FVSVGDFNF 169
Cdd:PRK08375 109 YALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLlYGVTGTLNM 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 170 SIWAfyNNVEFSNWVPL---LVLLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSFIL------- 239
Cdd:PRK08375 189 ADLA--GALAENPTVVTafgFVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVfggdfrf 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 240 GETCSALLLFISIMTMFMSGVVAIFEYDLKKIIALSTLSQLGMMMFSISL----GLYElAFFHLLTHALFKALLFLCAGI 315
Cdd:PRK08375 267 ALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALltplALAA-GLLHLLHHALMKGALFLAAGA 345
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 316 LIHGAGnTQDIRSFGGLSLNFPLVTVCMNLANLSLCGVPFLAGFYSKDLIVELACQYSWGIFVLLMMFICLsLTVLYSVR 395
Cdd:PRK08375 346 IEVTYG-TRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSL-LALLYFLR 423
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 87083565 396 LTYLSFVGPYGGGTSISVCESDYSLVGPVVILSFTSLVSG----PILSWLNFPAPVLI 449
Cdd:PRK08375 424 IWYRAFFGPPPPGSEAPKQEAPLGMLAPSLALALLSLLLGiyagPLLQLADAAAAGLL 481
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
63-314 |
3.73e-32 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 130.20 E-value: 3.73e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 63 LAVVLCISGNVVW-YSKSYMALDPNANRFILLVLGFVASMAILILSPNILSILLGWDGLGLISYGLVIYYPSKKSSS-AG 140
Cdd:PRK08168 74 MAALVQLLGWVIGrFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRPFARlAA 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 141 MITVLSNRVGDVCILLSIA-WFVSVGDFNFS-IWAFYNNVEFS---NWVPLLVLLAAMTKSAQIPFSAWLPAAMAAPTPV 215
Cdd:PRK08168 154 HKKFIADRLAELLLLAAAAlAYLEVGSLSLSaLWAHLAAQGASpslQAAALLLVLAVILKTAQLPVHGWLIQVMEAPTPV 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 216 SALVHSStLVTAGVYLLIRFSFILGETCSA--LLLFISIMTMFMSGVVAIFEYDLKKIIALSTLSQLGMMMFSISLGLYE 293
Cdd:PRK08168 234 SALLHAG-VVNLGGFVLIRFAPLLEQAPPArwLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLGLYE 312
|
250 260
....*....|....*....|.
gi 87083565 294 LAFFHLLTHALFKALLFLCAG 314
Cdd:PRK08168 313 LALLHLVAHSLYKAHAFLSAS 333
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
42-444 |
1.34e-29 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 122.39 E-value: 1.34e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 42 LGGSSVNFSMIFLLDSMSCFFLAVVLCISGNVVWYSKSYMALDPNANRFILLVLGFVASMAILILSPNILSILLGWDGLG 121
Cdd:PRK12667 67 FGGWPAPIGIVYEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLS 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 122 LISYGLVIYYPSKKSS-SAGMITVLSNRVGDVCILLSIAW-FVSVGDFNFSIWA-------FYNNVEFSNWVPLLVLLAA 192
Cdd:PRK12667 147 ISAYGLVAYYRDRGDAvEAAIKYALIGAVGTTLYFLALAFlYATFGTLNMADLSakirglsFPLTGGLAGNPPLALGVAL 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 193 -------MTKSAQIPFSAWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSF-ILGE---------TCSALLLFISIMT 254
Cdd:PRK12667 227 alalwafTIKAAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLYtIFGIspslidfraALSPILIILGAVS 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 255 MFMSGVVAIFEYDLKKIIALSTLSQLGMMMFSISLGL---YELAFFHLLTHALFKALLFLCAGILIHGAGnTQDIRSFGG 331
Cdd:PRK12667 306 AIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTqlgLAAALFHIINHAIAKSLLFLASGVFIHAAG-TRDIDELAG 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 332 LSLNFPLVTVCMNLANLSLCGVPFLAGFYSKDLIVELACQYSWGIFVlLMMFICLSLTVLYSVRLTYLSFVGPYGGGTSI 411
Cdd:PRK12667 385 LGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPA-LVLLIASAISLVGYFRAWYSLFFGKPKSGEEV 463
|
410 420 430
....*....|....*....|....*....|...
gi 87083565 412 SVCESdYSLVGPVVILSFTSLVSGPILSWLNFP 444
Cdd:PRK12667 464 EHKES-PSMSVVILVLALAVLILGILALFLPEI 495
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
51-365 |
3.43e-27 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 116.14 E-value: 3.43e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 51 MIFLLDSMSCFFLAVVLCISGNVVWYSKSYM--ALDPNANRFILLVLGFVASMAILILSPNILSILLGWDGLGLISYGLV 128
Cdd:PRK06521 74 FHLRLDALSAFFLLVISLLGAAASLYSLGYFreYEGKGPGAMGFFYNLFLASMVLVLLADDAFSFLVAWETMSLSSWFLV 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 129 IYYPSKKSS-SAGMITVLSNRVGDVCILLSIAWF-VSVGDFNFSIWAFYNNVEF-SNWVPLLVLLAAMTKSAQIPFSAWL 205
Cdd:PRK06521 154 IANHREAEIrRAGFLYLLMAHAGALAILLAFGLLaRESGSYDFAAMRAAHLSPFwASLVFLLALFGFGAKAGLVPLHVWL 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 206 PAAM-AAPTPVSALVhSSTLVTAGVYLLIRFSF-ILGETC---SALLLFISIMTMFMSGVVAIFEYDLKKIIALSTLSQL 280
Cdd:PRK06521 234 PRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFdLLGAPGwwwGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENI 312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 281 GMMMFSISLGLYELA--------------FFHLLTHALFKALLFLCAGILIHGAGnTQDIRSFGGLSLNFPLVTVCMNLA 346
Cdd:PRK06521 313 GIIFVGLGLAMVFIAygmpllaalaltaaLYHLLNHALFKSLLFLGAGAVLHATG-TRDMEKLGGLIRRMPWTAWAFLIG 391
|
330
....*....|....*....
gi 87083565 347 NLSLCGVPFLAGFYSKDLI 365
Cdd:PRK06521 392 CLAISALPPLNGFVSEWLL 410
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
18-406 |
1.95e-24 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 107.89 E-value: 1.95e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 18 LMFIAGFTGVFLSSEGTSIFFEWFLGgssvnFSMIFLLDSMSCFFLAVVLCISGNVVWYSKSYMA-LDPNANRFIL--LV 94
Cdd:PRK08667 43 LLLFAGSLQLFTGNPLDIPLWGIAPG-----LDITFHIDRLAAFFIILIGLVSLCVAIYSLGYNEhMSSNERANLLsaLT 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 95 LGFVASMAILILSPNILSILLGWDGLGLISYGLVIY-YPSKKSSSAGMIT-VLSNRVGDVCILLSIAWFVSVGDFNFSIw 172
Cdd:PRK08667 118 ALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNdYQEEETQRAGIFYfVMTQLSTVFLMLGIIVLFIQTGSFELSP- 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 173 AFYNNVEFSnWVPLLVLLAAMTKSAQIPFSAWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRF--SFILGETCSALLLF 249
Cdd:PRK08667 197 LGASAGILS-LVFLLLFLGFGIKAGIIPFHKWLPYAHpASPSNVSALM-SGVMLKVAVYGLVRFlmDVLSPELWWGVLIL 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 250 ISIMTMFMSGVV-AIFEYDLKKIIALSTLSQLGMMMFSISL----GLYEL----------AFFHLLTHALFKALLFLCAG 314
Cdd:PRK08667 275 LAGSISALLGVIyALKEHDLKGLLAYSSIENIGIILMGIGLyvifGVYGLdtlallalggALFHSLNHALFKSLLFLTAG 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 315 ILIHGAGnTQDIRSFGGLSLNFPLVTVCMNLANLSLCGVPFLAGFYSKDLIVELACQYSWGIFVLL--MMFICLSLTVLY 392
Cdd:PRK08667 355 SVVHATG-TRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFFQSFSVADPLIkiLLFSVLAIFALT 433
|
410
....*....|....
gi 87083565 393 SVrLTYLSFVGPYG 406
Cdd:PRK08667 434 SA-LAAACFVKAFG 446
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
48-407 |
6.04e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 105.03 E-value: 6.04e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 48 NFSMIFLLDSMSCFFLavvlcISGNVVWYSKSYMALDPNANRFI-LLVLGFVASMAILILSPNILSILLGWDGLGLISYG 126
Cdd:PRK07234 58 NFGVTLRADALSGYFI-----LTNALVTLAVIFYCWESAKTRFFyAQLLILHGSVNAAFVCADLISLYVALEVLSIATFL 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 127 LVIYYPSKKSSSAGMITVLSNRVGDVCILLSIAW-FVSVGDFNFSIWAFYNNVEFSnwvplLVLLAAMTKSAQIPFSAWL 205
Cdd:PRK07234 133 LVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLvYQANGTFAFSGLATADPEAFA-----LIALGLLVKGGIFVSGLWL 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 206 PAAMAAPTPVSALVHSSTLVTAGVYLLIRFSFILGETCSALLLFiSIMTMFMSGVVAIFEYDLKKIIALSTLSQLGMMMF 285
Cdd:PRK07234 208 PLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRIF-GVGTALLGVLFALLEKDLKRMLAFSTISQLGFILA 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 286 SISLGlyelAFFHlLTHALFKALLFLCAGILiHGAGNTQDIRSFGGLSLNFPLVtvcmnLANLSLCGVPFLAGFYSKDLI 365
Cdd:PRK07234 287 APLVG----GLYA-LAHGLVKSTLFLCAGAL-PSRNFTELISQMLGIGKWIPLT-----MASFSIAGFPLLAGFVSKVLT 355
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 87083565 366 VElacqYSWGIFVLLMMFICLsLTVLYSVRLTYLSFVGPYGG 407
Cdd:PRK07234 356 LK----NLLPWQAIALNLAAV-GTAASFWKFIFLPFSADDED 392
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
43-404 |
9.12e-23 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 102.10 E-value: 9.12e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 43 GGSSVNFSMIFLLDSMSCFFLAVVLCISGNVVWYSKSYMALDPNANRFILLVLGFVASMAILILSPNILSILLGWDGLGL 122
Cdd:PRK08376 76 GSGGFPIRIIWEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSI 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 123 ISYGLVIYYPSK-KSSSAGMITVLSNRVGDVCILLSIA-WFVSVGDFNFSIWA--FYNNVEFSNWVPLLVLLAAMT-KSA 197
Cdd:PRK08376 156 ASYALVAFRNDTwEAIEAGIKYMFVGSLASSMVLLGIAlLYGQYGTLNMAYLAvkMSENPTVVAKIALALFIAGLAmKSG 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 198 QIPFSAWLPAAM-AAPTPVSALVHSSTLvtAGVYLLIRFSF-ILGETCSA-----LLLFISIMTMFMSGVVAIFEYDLKK 270
Cdd:PRK08376 236 AVPVHMWLPDAYpAAPSSISAMLLVIKQ--AGLYALARVLFsIYGPAINLatvgwVIIILGCLTMFVGVAMAVVQKDVKR 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 271 IIALSTLSQLGMMMFSISLGLYEL---------------AFFHLLTHALFKALLFLCAGILIHGAGnTQDIRSFGGLSLN 335
Cdd:PRK08376 314 LLAYHSVSQIGYMLLGLGVGLAALgdpamasygeialagGIYHIVNHALYKALLFLTAGAVIYETG-TRNLNELGGLART 392
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 87083565 336 FPLVTVCMNLANLSLCGVPFLAGFYSKDLIVELACQYSWGIFVLLMmfICLSLTVLYSVRLTYLSFVGP 404
Cdd:PRK08376 393 MPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAM--IGSVLTLASFVKVFHTAFFGP 459
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
48-401 |
1.06e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 101.43 E-value: 1.06e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 48 NFSMIFLLDSMSCFFLAVVLCISGNVVWYSKSYMALD--PNANRFILLVLGFVASMAILILSPNILSILLGWDGLGLISY 125
Cdd:PRK06589 74 NYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINniDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTA 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 126 GLVIYYPSKKSSSAG-------MITVLSNRVGDVCILLSIAW---FVSVGDFNFSiwafynnvefSNWVPLLVLLAAMTK 195
Cdd:PRK06589 154 FLIGHTRNNISLSGGykylkilMISALLLFLPAVILIYTKTGnldFVSGGLFSKN----------QSIILLLMFIYGIAK 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 196 SAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSF----------ILGEtcSALLLFISIMTMFMSGVVAIFE 265
Cdd:PRK06589 224 TAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLyifglsylqrIFAE--FNWLIFIPIVSIFYSSLKALKT 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 266 YDLKKIIALSTLSQLGMMMFSISL---GLYELAFFHLLTHALFKALLFLCAGILIHGAGnTQDIRSFGGLSLNFPLVTVC 342
Cdd:PRK06589 302 DNIKKILAYSTISQLSLALLSAFIltpKALGAAILHLVSHSFAKICLFYSMGSIYSLKK-EDQVDKLHGTSKSFPLISFI 380
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 87083565 343 MNLANLSLCGVPFLAGFYSKDLIVELAC---QYSWGIFVLLMMFICLSLTVLYSVRLTYLSF 401
Cdd:PRK06589 381 ISISSLSLIGIPIFSGFISKFLILLAASeqnQPWLSIIVMLVVIASSILSALYLLKILSSIY 442
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
83-380 |
1.50e-21 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 97.91 E-value: 1.50e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 83 LDPNANRFILLVLGFVAsmaiLILSPNILSILLGWDGLGLISYGLVIYYPSKKSSSAGMITVLSNRVGDVCILLSIAW-F 161
Cdd:PRK08377 107 IDKYAMLFLLLMLGATG----MIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALiY 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 162 VSVGDFNFS-IWAFYNNVE-FSNWVPL-LVLLAAMTKSAQIPFSAWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIRFSF 237
Cdd:PRK08377 183 GATGTLNMAhIAQLAGTIDpTVAQVGLaLLIFGLAVEAELFPLNAWAPDAyQAAPHPITVMF-SAFVVKAGLYAMARILY 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 238 IL--GETCSALLLFISIM---TMFMSGVVAIFEYDLKKIIALSTLSQLGMMMFSISLGL---YELAFFHLLTHALFKALL 309
Cdd:PRK08377 262 LMqnANGWSSVLKLVIIMatlTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTqagVDAGVFHMINHAIVKALL 341
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 87083565 310 FLCAGILIHGAGNTQdIRSFGGLSLNFPLVTVCMNLANLSLCGVPFLAGFYSKDLIVELACQ--YSWGIFVLL 380
Cdd:PRK08377 342 FLAVGYVGITLGGTE-IEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSagYTWPVALVL 413
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
11-403 |
1.90e-20 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 95.06 E-value: 1.90e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 11 ISFFLVNLMFIAGFTGVFLSSEGTSIFFEWFLGGSSVNFSMI-------FLLDSMSCFFLAVVLCISGNVVWYSKSYMAL 83
Cdd:PRK08668 16 LAYLLKKINEKIGVIGNALPLLFLIKLYFTLKVGTGEKLTLFfggfkltFTLTHLSWFFAMISLLVIFSVAFFMVSEKTK 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 84 DPNAnrFILLVLGFVASMAILILSPNILSILLGWDGLGLISYgLVIYYPSKKSSSAGMITVLSNRVGDVCILLSIAWFVS 163
Cdd:PRK08668 96 NDAY--FNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSF-MMVPMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYA 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 164 -VGDFNFS--IWAFYNN--VEFSNWVPLLVLLAAMTKSAQIPFSAWLPAAMA-APTPVSAlVHSSTLVTAGVYLLIRFSF 237
Cdd:PRK08668 173 kTGTFDFAdiSQGLINDtsTGFALIVFLFLLAFGVAKAGIFPLHVWAPDAYSeAPQSFSA-VLSGQLSKLGAYGFLLVLY 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 238 ILGET--------------CSALLLFISIMTMFMSGVVAIFEYDLKKIIALSTLSQLGMMMFSISLGL---YELAFFHLL 300
Cdd:PRK08668 252 VLPGTklfsefgtyrgvplFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTslgFAGGLFHVF 331
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 301 THALFKALLFLCAGILIHGAGNTQdIRSFGGLSLNFPLVTVCMNLANLSLCGVPFLAGFYSKDLIVELACqySWGIFVLL 380
Cdd:PRK08668 332 NHALFKGLFFLIFAAVIYRTGTTK-ISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALI--SKGMPITA 408
|
410 420
....*....|....*....|....
gi 87083565 381 -MMFICLSLTVLYSVRLTYLSFVG 403
Cdd:PRK08668 409 fMAFFGSIGSFLYVFRPLAGVFLG 432
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
36-389 |
2.00e-20 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 94.98 E-value: 2.00e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 36 IFFEWfLGGSSVNFSMIFLLDSMSCFFLAVVLCISGNVVWYSKSYMALDPNANRFILLVLGFVASMAILILSPN------ 109
Cdd:PRK07390 69 LSFPW-LQVADLDLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSlffsyv 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 110 ILSILLgwdglgLISYGLV-IYYPSKKSSSAGMITVLSNRVGDVCILLS-IAWFVSVGDFNFS---IWAfyNNVEFSNWV 184
Cdd:PRK07390 148 LLEILT------LSTYLLVgFWYAQPLVVTAARDAFLTKRVGDLLLLMGvVALSPLAGTLNFSdlaAWA--ATANLDPLT 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 185 PLLVLLA----AMTKSAQIPFSAWLPAAMAAPTPVSALvHSSTLVTAGVYLLIRFS--FILGETCSALLLFISIMTMFMS 258
Cdd:PRK07390 220 ATLLGLAliagPTGKCAQFPLHLWLDEAMEGPNPASIL-RNSVVVATGAWVLIKLQpvLALSPVALTVLIVIGTVTAIGA 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 259 GVVAIFEYDLKKIIALSTLSQLGMMMFSISLGLYELAFFHLLTHALFKALLFLCAGILIHGAgNTQDIRSFGGLSLNFPL 338
Cdd:PRK07390 299 SLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILTT-ITQDLTELGGLWSRMPA 377
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 87083565 339 VTVCMNLANLSLCGVPFLAGFYS-KDLIVELACQYSW--GIFVLLMMFICLSLT 389
Cdd:PRK07390 378 TTLAFLVGSAGLVALLPLGGFWAlLRLADGLWAVSPWlvGVLLLVNALTAFNLT 431
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
20-362 |
2.45e-20 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 94.03 E-value: 2.45e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 20 FIAGFTGVFLSSEGTSIFFEWFlGGSSVNFSMIFLLDSMSCFFLAVVLCISGNVVWYSKSYMALDP-NANRFILLVLGFV 98
Cdd:COG1007 34 LLAGLALLGLLLALALLLLALG-GGTGTAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRGlLRGEFYALLLFAT 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 99 ASMAILILSPNILSILLGWDGLGLISYGLV-IYYPSKKSSSAGMITVLSNRVGDVCILLSIAW-FVSVGDFNFSIWAFYN 176
Cdd:COG1007 113 LGMMLMASANDLLTLFLGLELLSLSLYVLVaFRRDDRRSSEAALKYFLLGALSSGFLLYGISLlYGATGSLNLAGIAAAL 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 177 NvefSNWVPLLVLLAAMT--------KSAQIPFSAWLP-AAMAAPTPVSALVhsSTLV-TAGVYLLIRFSFI----LGET 242
Cdd:COG1007 193 A---AGGANSPLLLLGLVlvlaglafKLSAVPFHMWTPdVYEGAPTPVTAFL--ATAPkIAAFAALLRLLVEafpgLAAD 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 243 CSALLLFISIMTMFMSGVVAIFEYDLKKIIALSTLSQLGMMMFSISLGL---YELAFFHLLTHALFKALLFLCAGILIHG 319
Cdd:COG1007 268 WQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTplgVSAALFYLLAYLFMNLGAFAVILLLSRK 347
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 87083565 320 AGNTQDIRSFGGLSLNFPLVTVCMNLANLSLCGVPFLAGFYSK 362
Cdd:COG1007 348 GGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGK 390
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
392-551 |
5.79e-20 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 87.61 E-value: 5.79e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 392 YSVRLTYLSFVGPYGGGTSISVCESDYSLVGPVVILSFTSLVSGPILSWLNFPAPVLIFLPVFLKWGALFFVGVSLLVML 471
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 472 SLQGLTYSYK----WGAVSKFSGLMWFLPWLTGQGFSMKTLKNADHLLKIYDQGWLEFYSSKGLEVVGGKVNTLNLKFQH 547
Cdd:pfam06455 81 ELSNLSNKQLkkslNFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQIDQGWSEKFGPQGIAKTLMTLSKIIQNSQK 160
|
....
gi 87083565 548 SSLK 551
Cdd:pfam06455 161 GLIK 164
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
149-404 |
6.10e-20 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 92.84 E-value: 6.10e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 149 VGDVCILLSIAW-FVSVGDFNFSIWAFYNN---VEFSNWVPLLVLLAAMTKSAQIPFSAWLP-AAMAAPTPVSALvHSST 223
Cdd:COG1008 172 AGSLLMLVAILAlYFLAGALTFDIAELAAAplpLTAQLLLFLAFFIAFAVKVPMFPFHTWLPdAHVEAPTAGSVL-LAGV 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 224 LVTAGVYLLIRFSF-ILGETCSA---LLLFISIMTMFMSGVVAIFEYDLKKIIALSTLSQLGMMMfsisLGLYEL----- 294
Cdd:COG1008 251 LLKMGGYGLLRFALpLFPEASAYfapLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVL----LGIFALnplgl 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 295 --AFFHLLTHALFKALLFLCAGILIHGAGnTQDIRSFGGLSLNFPLVTVCMNLANLSLCGVPFLAGFYSKDLIVELACQY 372
Cdd:COG1008 327 qgAVLQMVSHGLITAALFLLVGVLYDRTH-TRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLGAFQV 405
|
250 260 270
....*....|....*....|....*....|..
gi 87083565 373 SWGIFVLLMmfICLSLTVLYSVRLTYLSFVGP 404
Cdd:COG1008 406 NPWLAILAA--LGLILTAAYLLWMYQRVFFGP 435
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
95-383 |
1.74e-19 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 91.88 E-value: 1.74e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 95 LGFVASMAILILSPNILSILLGWDGLGLISYGLVIYYPSKKSSSAGMITVLSNRVGDVCILLSIAWFVS-VGDFNFSiwA 173
Cdd:PRK12668 100 LLYVGSALGAVFAGDLLTLFVFWELMAFTSTFLVWARGTKAAVRAGFRYLLVHVLGGVLLLAGILLHYAeTGSFAFG--A 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 174 FYNNVEFSNWvplLVLLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRfSFILGEtcsaLLLFI-SI 252
Cdd:PRK12668 178 IAGLGGTAAW---LILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALAR-AFPGTE----LLIYIgAA 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 253 MTMFmsGVV-AIFEYDLKKIIALSTLSQLGMMMFSISLGLyEL----AFFHLLTHALFKALLFLCAGILIHGAGnTQDIR 327
Cdd:PRK12668 250 MAVY--GVFfALLENDLRRLLSYHIVSQVGYMVAGIGIGT-ALaingAVAHAFNHILYKGLLFMSAGAVLYRTG-TEKLT 325
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 87083565 328 SFGGLSLNFPLVTVCMNLANLSLCGVPFLAGFYSKDLIVELACQYSWGIFVLLMMF 383
Cdd:PRK12668 326 ELGGLYRSMPLTALFCLVGALSISAFPLFSGFVSKSMIISAAGEDHYVWVWLLLLL 381
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
53-314 |
5.62e-19 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 90.09 E-value: 5.62e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 53 FLLDSMSCFFLAVVLCISGNVVWYSKSYMALDPNANR-FILLVL-GFVASMAILilSPNILSILLGWdGLGLISYGLVIY 130
Cdd:PRK08601 68 WHLDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKyFALFTFtTGFASLAWL--SGDLRLMALCW-GATLLGLTLLIG 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 131 YPS--KKSSSAGMITVLSNRVGDVCILLSIAW-FVSVGDfnfsiWAFYNNVEFSNWVP----------LLVLLAAMTKSA 197
Cdd:PRK08601 145 LNKgwKVAREAAKISGMLFLISWLALALAIVWlFIATGE-----WQLTSVLSNENLAQlgtwektginLLLILAVMIPAA 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 198 QIPFSAWLPAAMAAPTPVSALVHSStLVTAGVYLLIRFSFILGETC--SALLLFISIMTMFMSGVvAIFEYDLKKIIALS 275
Cdd:PRK08601 220 QWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFHDDIaqILLLIFASISVLIGTGI-SLVQVDYKRQLVGS 297
|
250 260 270
....*....|....*....|....*....|....*....
gi 87083565 276 TLSQLGMMMFSISLGLYELAFFHLLTHALFKALLFLCAG 314
Cdd:PRK08601 298 TMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSG 336
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
184-394 |
7.50e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 89.62 E-value: 7.50e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 184 VPLLVLLAAMTKSAQIPFSAWLPAA-MAAPTPVSALVhSSTLVTAGVYLLIR-FSFILGETCS---ALLLFISIMTMFMS 258
Cdd:PRK07691 211 VAILFLFVFATKAGLFPLYFWLPGSyYAPPIAIAALF-GALLTKVGVYAIARtFTLFFSHDTSfthYLILILALLTIIFG 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 259 GVVAIFEYDLKKIIALSTLSQLGMMMFSISLGLYEL---AFFHLLTHALFKALLFLCAGILIHGAGnTQDIRSFGGLSLN 335
Cdd:PRK07691 290 VIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIKITG-TTDLKKMGGLIKR 368
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 87083565 336 FPLVTVCMNLANLSLCGVPFLAGFYSKDLIVELAcqYSWGIFVLLMMFICLSLTVLYSV 394
Cdd:PRK07691 369 YPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGT--FEAGFYVSGIIVLLSSLLVLYSV 425
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
35-362 |
5.53e-17 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 83.72 E-value: 5.53e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 35 SIFFEWFLGGSSVNFSMIFLLDSMSCFFLAVVLCISGNVVWYSKSYMAlDPNANRFILLVLGFVASMAILILSPNILSIL 114
Cdd:PRK05777 51 ALLFVLGAAGGGTAFGGMLVVDGFALFLKGLILLASLLALLLARPYLE-DRGRGEFYLLVLFALLGMMVMVSANDLLTLF 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 115 LGWDGLGLISYGLVIY-YPSKKSSSAGMITVLSNRVGDVCILLSIAWF-VSVGDFNFSIWAFYNNVEFSNWVPLLVLLAA 192
Cdd:PRK05777 130 LGLELLSLPLYALAALrRDRRRSLEAAIKYFVLGALASGFLLYGMSLLyGATGSLSFAGIAKALADGSGNSLLLLFGLVF 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 193 MT-----KSAQIPFSAWLPAAM-AAPTPVSALVHSSTLVtAGVYLLIRFSFI----LGETCSALLLFISIMTMFMSGVVA 262
Cdd:PRK05777 210 LLvglafKLSAVPFHMWTPDVYeGAPTPVTAFLATAPKI-AAFAVLLRLLVVafggLSEDWQQVLAIIAIASMLVGNLAA 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 263 IFEYDLKKIIALSTLSQLGMMMFSISLGL---YELAFFHLLTHALFKALLFLCAGILIHGAGNTQDIRSFGGLSLNFPLV 339
Cdd:PRK05777 289 LSQTNIKRLLAYSSIAHAGYLLVGLAAGTaegYSAVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLL 368
|
330 340
....*....|....*....|...
gi 87083565 340 TVCMNLANLSLCGVPFLAGFYSK 362
Cdd:PRK05777 369 AAVMTIFMLSLAGIPPTAGFWGK 391
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
184-404 |
7.27e-17 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 83.46 E-value: 7.27e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 184 VPLLVLLAAMTKSAQIPFSaWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSFIL----GETCSALLLFISIMTMFMSG 259
Cdd:PRK12663 209 IALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLfpqeRELLHPLLATMAAITMVIGA 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 260 VVAIFEYDLKKIIALSTLSQLGMMMFSISLGLY---ELAFFHLLTHALFKALLFLCAGILIHGAGNTQdIRSFGGLSLNF 336
Cdd:PRK12663 288 LGALAYKDIRRIAGYQVISSIGFILLGLALGTPagiNGAIFYLVHDMVVKTALFLIAGSLVRLTGYRS-LQYLGGLYRKE 366
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 87083565 337 PLVTVCMNLANLSLCGVPFLAGFYSKDLIVELACQYswGIFVLLMMFICLSLTVLYSV-RLTYLSFVGP 404
Cdd:PRK12663 367 PLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDN--GAYILLALMLITSLITMYSLfRIFFLAYWGD 433
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
79-365 |
1.87e-15 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 78.83 E-value: 1.87e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 79 SYMALDPNANRFILLVLGFVASMAILILSPNILSILLGWDGLGLISYGLVIYYPSKKSSSAGMITVLSNRVGDVCILLSI 158
Cdd:TIGR01972 97 SWESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGGPNRIYAAMKFFLYTLAGSLLMLLAI 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 159 AWFVSVGDFNFSIWAFYNNvEFSNWVPLLVLLAAM----TKSAQIPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLLI 233
Cdd:TIGR01972 177 LGLYFLGGGTFDLLELLNL-PLPFGVQTWLFLAFFiafaVKVPLFPLHTWLPDAHVeAPTAGSVIL-AGVLLKMGTYGFL 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 234 RFSFILGETCSA----LLLFISIMTMFMSGVVAIFEYDLKKIIALSTLSQLGMMM---FSISLGLYELAFFHLLTHALFK 306
Cdd:TIGR01972 255 RFNLPLFPDASLyfapVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLlgiFSFNELGISGAVFQMISHGLIT 334
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 87083565 307 ALLFLCAGILIHGAGnTQDIRSFGGLSLNFPLVTVCMNLANLSLCGVPFLAGFYSKDLI 365
Cdd:TIGR01972 335 AALFLLVGVLYERAH-TRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLI 392
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
199-359 |
7.29e-15 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 77.56 E-value: 7.29e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 199 IPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSFILGET---CSALLLFISIMTMFMSGVVAIFEYDLKKIIAL 274
Cdd:PRK08042 197 IPLHGWVPQAHAnASAPAAALF-STVVMKIGLLGILTLSLLGGNAplwWGVALLVLGMITAFVGGLYALMEHNIQRLLAY 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 275 STLSQLGMMMFSISLGLYELA--------------FFHLLTHALFKALLFLCAGILIHGAGNtQDIRSFGGLSLNFPLVT 340
Cdd:PRK08042 276 HTLENIGIILLGLGAGVTGIAleqpalialglvggLYHLLNHSLFKSVLFLGAGSVWFRTGH-RDIEKLGGIGKKMPVIS 354
|
170
....*....|....*....
gi 87083565 341 VCMNLANLSLCGVPFLAGF 359
Cdd:PRK08042 355 IAMLVGLMAMAALPPLNGF 373
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
186-394 |
1.43e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 76.55 E-value: 1.43e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 186 LLVLLAAMTKSAQIPFSAWLPAAM-AAPTPVSAlVHSSTLVTAGVYLLIRFSFIL--GETCSALLLFISIMTMFMSGVVA 262
Cdd:PRK12665 213 AVLLVAFGIKAAVFPLSFWLPDSYpTAPAPVTA-VFAGLLTKVGVYAIIRTHTLLfpGGGLDTLLMVVALLTMVVGILGA 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 263 IFEYDLKKIIALSTLSQLGMMMFSISLGL---YELAFFHLLTHALFKALLFLCAGiLIHGAGNTQDIRSFGGLSLNFPLV 339
Cdd:PRK12665 292 IAQSDIKRLLSFTLVSHIGYMVFGIALSTvagLSGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASPLL 370
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 87083565 340 TVCMNLANLSLCGVPFLAGFYSKDLIVELACQY-SWGIFVLLMMFICLSLTVLYSV 394
Cdd:PRK12665 371 AVLFFVPALNLGGIPPFSGFIGKVALLEAGAEDgTWLAWALVAGGVVTSLLTLYAV 426
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
186-392 |
1.48e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 73.25 E-value: 1.48e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 186 LLVLLAAMTKSAQIPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSFIL-----GETCSALLLFISIMTMFMSG 259
Cdd:PRK08676 210 LFIFIGFLAKSGLVPFHTWLPAAYAkAPSVVSALL-SGTVLNIGIYGILRLSALLrqsgaAEQFSNVLIGLGIFSIAVAA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 260 VVAIFEYDLKKIIALSTLSQLGMMMFSISLGLYELAF---FHLLTHALFKALLFLCAGILIHGAGNTQDIRSFGGLSLNf 336
Cdd:PRK08676 289 FSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQ- 367
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 87083565 337 PLVTVCMNLANLSLCGVPFLAGFYSK-DLIVELACQYSWGIFVLLMMFICLSLTVLY 392
Cdd:PRK08676 368 PVAAWGVILGSAAIIGMPPFPLFLSKfFILLQLGGISVWLVLAVLLLLLLAASSFAI 424
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
187-388 |
5.84e-13 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 71.11 E-value: 5.84e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 187 LVLLAAMTKSAQIPFSAWLPAAMA-APTPVSALVhSSTLVTAGVYLLIRFSFILGETCSALLL--FISIMTMFMSGVVAI 263
Cdd:PRK06458 219 FLLIGFGTKVGLFPMHAWLPDAHSeAPSPVSALL-SGVLLNVALYAVLRYYILIDAAIGSDFPgrLLLIFGLLSVLVAAF 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 264 FEY---DLKKIIALSTLSQLGMMMFSISLGlYELAFF----HLLTHALFKALLFLCAGILIHGAGnTQDIRSFGGLSLNF 336
Cdd:PRK06458 298 FLLrqrDIKRLFAYSSIEHMGLIAFALGIG-GPLGIFaallHMLNHSLTKSAIFFASGNVLQKYG-TRDINVIRGLLKVS 375
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 87083565 337 PLVTVCMNLANLSLCGVPFLAGFYSKDLIVELACQ-YSWGIFVLLMMFICLSL 388
Cdd:PRK06458 376 PLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLArGPLLIAILLLLLLTLAF 428
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
145-366 |
1.18e-11 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 67.15 E-value: 1.18e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 145 LSNRVGDVCILLSIAWFVSV-----GDFNFSIWAfynNVEFSNWVPLLVLLAAM----TKSAQIPFSAWLPAAMA-APTP 214
Cdd:PRK05846 168 LYTLLGSLLMLVAIIYLVVVyynatGTFDIADLL---NLPLPPGVQYWLFLAFFiafaVKMPMFPLHTWLPDAHVqAPTA 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 215 VSALvHSSTLVTAGVYLLIRFSFILGETCSA----LLLFISIMTMFMSGVVAIFEYDLKKIIALSTLSQLGMMMFSI--- 287
Cdd:PRK05846 245 GSVL-LAGILLKMGAYGLLRFSLPLFPDASHefapIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIfag 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 288 -SLGLyELAFFHLLTHALFKALLFLCAGILIHGAGnTQDIRSFGGLSLNFPLVTVCMNLANLSLCGVPFLAGFYSKDLIV 366
Cdd:PRK05846 324 nQLGI-QGAIFQMISHGLSSAALFLLVGVLYDRLH-TRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLIL 401
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
18-362 |
1.26e-11 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 66.95 E-value: 1.26e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 18 LMFIAgFTGVFLSSegTSIFFEW-------FLGGSSVN-FSMIFlldsMSCFFLAVVLCISGNVVWYSKSYMALdpnaNR 89
Cdd:CHL00049 44 LYFIS-STSLVMSI--TALLFQWreepmisFSGNFQTNnFNEIF----QFLILLCSTLCIPLSVEYIECTEMAI----TE 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 90 FILLVLGFVASMAILILSPNILSILLGWDGLGLISYGLVIYypSKK---SSSAGMITVLSNRVGDVCILLSIAWFVSVGD 166
Cdd:CHL00049 113 FLLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGY--TKKdvrSNEATMKYLLMGGASSSILVYGFSWLYGLSG 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 167 FNFSIWAFYNNVEFSN-------WVPLLVLLAAMT-KSAQIPFSAWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIR--- 234
Cdd:CHL00049 191 GEIELQEIVNGLINTQmynspgiSIALIFITVGIGfKLSLAPFHQWTPDVYeGSPTPVVAFL-SVTSKVAASALATRifd 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 235 --FSFILGETCSALLLfISIMTMFMSGVVAIFEYDLKKIIALSTLSQLGMMMFSISLGLYELAFFHLLTHALFKALL--- 309
Cdd:CHL00049 270 ipFYFSSNEWHLLLEI-LAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYIFMnlg 348
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 87083565 310 -FLCAgILIHGAGNTQDIRSFGGLSLNFPLVTVCMNLANLSLCGVPFLAGFYSK 362
Cdd:CHL00049 349 tFACI-VLFGLRTGTDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
79-435 |
1.94e-11 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 66.21 E-value: 1.94e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 79 SYMALDPNANRFILLVLGFVASMAILILSPNILSILLGWDGLGLISYGLVIYYPSKKSSSAGMITVLSNRVGDVCILLSI 158
Cdd:PRK06277 91 TGLGEKKSSGLYVFLMLMGLASVSAIVLADDIFNLYVFFEIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGI 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 159 AWFVSV-GDFNFSIWAFYNNVEFSNwvPLLVLLAAMT------KSAQIPFSAWLPAAMAAPTP-VSALVHSSTLVTAGVY 230
Cdd:PRK06277 171 GFLLAStGTLNITDIHNALLVNPTS--PVIYGGLLLLifgllyGSGLPPFHTIKSDIYAKAKPfGSALLQTFSKFVLVAL 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 231 LLIRFSFILGE----TCSALLLFISIMTMFMSGVVAIFEYDLKKIIALSTLSQLGMMMFSISLGL---YELAFFHLLTHA 303
Cdd:PRK06277 249 MLVIFKLFGGLsyfpSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTplgIVAGIFHAINHV 328
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 304 LFKALLFLCAGIlIHGAGNTQDIRSFGGLSLNFPLVTVCMNLANLSLCGVPFLAGFYSKDLIVELACQYSWGIFVLLMMF 383
Cdd:PRK06277 329 IYKSALFLGAGI-VSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMII 407
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 87083565 384 ICLSlTVLYSVRLTYLSFVGPYGGGTSISVCESDYSLVGPVVILSFTSLVSG 435
Cdd:PRK06277 408 VSIG-TFVSMMKAFYLIYLKPKPEELEYKNKKVPKYAVFSLAVLTILCIILG 458
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
186-362 |
4.57e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 62.06 E-value: 4.57e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 186 LLVLLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIR---------FSFILGETCSALLLFISIMTMF 256
Cdd:PRK12662 213 LFIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRivydvfkanFVFTTLPFNNVFMILAALAIVF 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 257 MSgVVAIFEYDLKKIIALSTLSQLGMMMFSISLGLYE---LAFFHLLTHALFKALLFLCAGILIHGAGNTqDIRSFGGLS 333
Cdd:PRK12662 293 GS-VLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISYHFGTT-KLEDCLNLW 370
|
170 180
....*....|....*....|....*....
gi 87083565 334 LNFPLVTVCMNLANLSLCGVPFLAGFYSK 362
Cdd:PRK12662 371 KSMPKITLAFVLLSLSLIGMPPTSGFVAK 399
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
195-362 |
6.69e-10 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 61.61 E-value: 6.69e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 195 KSAQIPFSAWLPAAM-AAPTPVSALVhSSTLVTAGVYLLIRF---SF-ILGETCSALLLFISIMTMFMSGVVAIFEYDLK 269
Cdd:PRK02504 223 KISAVPFHQWTPDVYeGSPTPVVAFL-SVGSKAAGFALAIRLlvtAFpSFDEQWKLLFTALAILSMVLGNVVALAQTSMK 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 270 KIIALSTLSQLGMMMFSISLGL---YELAFFHLLTHALFKALLFLCAgILIHGAGNTQDIRSFGGLSLNFPLVTVCMNLA 346
Cdd:PRK02504 302 RMLAYSSIGQAGFVMIGLVAGTeagYASMVFYLLAYLFMNLGAFACV-ILFSLRTGTDQISDYAGLYQKDPLLTLGLSLC 380
|
170
....*....|....*.
gi 87083565 347 NLSLCGVPFLAGFYSK 362
Cdd:PRK02504 381 LLSLGGIPPLAGFFGK 396
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
179-396 |
3.18e-08 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 56.21 E-value: 3.18e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 179 EFSNWVPLLVLLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSFIL----GETCSALLLFISIMT 254
Cdd:MTH00217 203 ELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLlpeaSEYFSPLIQTLSLLA 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 255 MFMSGVVAIFEYDLKKIIALSTLSQLGMM---MFSISLGLYELAFFHLLTHALFKALLFLcAGILIHGAGNTQDIRSFGG 331
Cdd:MTH00217 283 IIYGSLTTCRQVDLKRIIAYSSVAHMGLVtlgIFSHTIQGLVAAIFLMLAHGLVSSALFI-AVTFLYERHHTRLIKYYRG 361
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 87083565 332 LSLNFPLVTVCMNLANLSLCGVPFLAGFYSKDLIVELACQYSWGIFVLLMMFICLSLTvlYSVRL 396
Cdd:MTH00217 362 MVITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAG--YSIYL 424
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
75-314 |
4.22e-08 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 55.95 E-value: 4.22e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 75 WYSKSYmalDPNANRFILLVLGFVASMAILILSPNILSILLGWDGLGLISYglVIYYPSKKSSSAGMITVLSNRVGDVCI 154
Cdd:PRK06459 62 LYSIEY---DHYGKWLSSLYILTILGMAIVLTSDNYLLFLAGWEIMTIPSY--VAIALTKKNKRPAFVFMAFGELSTVLI 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 155 LLSIAW-FVSVGDFNFSIWAfynnvefSNWVPLLVLLAAMTKSAQIPF--SAWLPAAMA-APTPVSAlVHSSTLVTAGVY 230
Cdd:PRK06459 137 LAGFAWaFIISGTTNFSYLP-------SPVPLILASFGFIIKMGMMPFlvSEWLPIAHGnAPSNFSA-ILSATMTLMGVY 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 231 LLIRFSFiLGETCSALLLFISIM-----TMFMSGVVAIFEYDLKKIIALSTLSQLGMMMfsISLGLYELA---------- 295
Cdd:PRK06459 209 GILKMTI-LTQTIPIGYFGLTILaigafSILFGALYAYVSENVKGLLAFSTIENNGAIL--VALGLYMVTkqlitsiehf 285
|
250 260
....*....|....*....|....
gi 87083565 296 -----FFHLLTHALFKALLFLCAG 314
Cdd:PRK06459 286 slitvILYSFAHSVAKTGLFLSSG 309
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
91-396 |
3.70e-07 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 52.79 E-value: 3.70e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 91 ILLVLGFVASMailILSPNILSILLGWDgLGLISYGLVIY-YPSKKSSSAGMITVLSNRVGDVCIL---LSIAWFVSVGD 166
Cdd:PRK07363 113 ILLINGGIAGA---LLAQNLLLFFLFYE-LELIPFYLLIAiWGGEKRGYASIKFLIYTAVSGLLVLaafLGIVWLSGSTS 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 167 FNFSIwAFYNNVEFSNWVPLLV--LLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSFIL----G 240
Cdd:PRK07363 189 FDYDA-ISTQNLSLNTQLILLTglLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLfpqtW 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 241 ETCSALLLFISIMTMFMSGVVAIFEYDLKKIIALSTLSQLGMMMFSISLGLyELAFF----HLLTHALFKALLFLCAGIL 316
Cdd:PRK07363 268 SLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGT-QLSLLgavaQMISHGLILALLFHLVGIV 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 317 IHGAGnTQDIRSFGGLS---LNFPLVTVCMNLANLSLCGVPFLAGFYSKDLIVelacQYSWGIFVL--LMMFICLSLTVL 391
Cdd:PRK07363 347 ERKVG-TRDLDVLNGLMnpiRGLPLTSALLVLAGMASAGIPGLVGFVAEFIVF----QGSFSTFPIptLLCIVASGLTAV 421
|
....*
gi 87083565 392 YSVRL 396
Cdd:PRK07363 422 YFVIL 426
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
177-443 |
5.11e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 52.43 E-value: 5.11e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 177 NVEFSNWVPLLVLLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSstLVTAGVYLLIRFSFILGETcsaLLLFISIMTMF 256
Cdd:PRK12664 139 NGQYTGYCKLLFMLGLLINCACFPASSWVVDAYPAASNFGIIVLS--LFTTKVAALVLLLFFSGEE---ILLFLGIITAI 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 257 MSGVVAIFEYDLKKIIALSTLSQLGMMMFSISL-----GLYELAFFHLLTHALFKALLFLCAGILIHGAGnTQDIRSFGG 331
Cdd:PRK12664 214 YGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFsgssgVAIGILILQIVLSVVYQTLLFMVADSVINRTR-KFNLNRVGG 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 332 LsLNFPLVTVCMNLANLSLCGVPFLAGFYSKDLIVELACQYSWGIFVLLMMFICLSLTVLYSV--RLTYLSFVGPYGGGT 409
Cdd:PRK12664 293 L-FKMSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTLVLYKKLFLICSLLLFASVglKFFWYAFISKSKSKP 371
|
250 260 270
....*....|....*....|....*....|....
gi 87083565 410 SISvcESDYSLVGPVVILSFTSLVSGPILSWLNF 443
Cdd:PRK12664 372 EAE--KVYIGSKLSMIILVLICVVLGMFNSYLLF 403
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
183-388 |
6.51e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 51.99 E-value: 6.51e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 183 WVPLLVLLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSFIL----GETCSALLLFISIMTMFMS 258
Cdd:MTH00204 210 WLLVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLfpaaSEYFAPLIVMLSVIAVIYG 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 259 GVVAIFEYDLKKIIALSTLSQLGMM---MFSISLGLYELAFFHLLTHALFKALLFLCAGILiHGAGNTQDIRSFGGLSLN 335
Cdd:MTH00204 290 SLTTCRQVDFKRLIAYSSVAHMGLVplgLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFL-YERHHTRLIKYYRGLTLT 368
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 87083565 336 FPLVTVCMNLANLSLCGVPFLAGFYSKDLIVELACQYSWGIFVLLMMFICLSL 388
Cdd:MTH00204 369 MPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSA 421
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
184-365 |
4.38e-06 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 49.31 E-value: 4.38e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 184 VPLLVLLAamTKSAQIPFSAWLP-AAMAAPTPVSALVhSSTLVTAGVYLLIRFSFIL----GETCSALLLFISIMTMFMS 258
Cdd:PRK06473 209 APILVGFG--IKIPLVPFHTWLPdAHVEASTPVSVLL-AGVLLKLGTYGLLRFGVGLfpeaWVYLAPWLATWAVVSVLYG 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 259 GVVAIFEYDLKKIIALSTLSQLGMMMF----SISLGLYElAFFHLLTHALFKALLFLCAGILIHGAGnTQDIRSFGGLsL 334
Cdd:PRK06473 286 ASCAIAQKDMKKMVAYSSIGHMGYILLaaaaATPLSILA-AVFQMISHGLISALLFLLVGVVYKKTG-SRDVDVLRGL-L 362
|
170 180 190
....*....|....*....|....*....|....*
gi 87083565 335 N----FPLVTVCMNLANLSLCGVPFLAGFYSKDLI 365
Cdd:PRK06473 363 NpergLPITGSLMILGVMASAGIPGMVGFIAEFLV 397
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
183-398 |
5.88e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 49.15 E-value: 5.88e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 183 WVPLLVLLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSFIL----GETCSALLLFISIMTMFMS 258
Cdd:MTH00226 231 WIFLGIFLAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPIlplgAQNLAPAVIAMGIVGIVYG 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 259 GVVAIFEYDLKKIIALSTLSQLGMMmfSISLGLYEL-----AFFHLLTHALFKALLFLCAGILiHGAGNTQDIRSFGGLS 333
Cdd:MTH00226 311 SFATCRQIDVKRLVAYSSVAHMGLV--SITLVTHDIigltgSIFIMLAHGIVSSLLFILVTIL-YDRHHTRLIKYYRGLS 387
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 87083565 334 LNFPLVTVCMNLANLSLCGVPFLAGFYSKDLivELACQYSW----GIFVLLMMFICLSLTVLYSVRLTY 398
Cdd:MTH00226 388 ITMPIWGTIMIVTSLANVAVPPSGNFIGEYL--SILSSFNWnpiiGVFVCSGVILSAVYSFYFANRVTF 454
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
186-396 |
3.28e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 46.18 E-value: 3.28e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 186 LLVLLAAMTKSAQIPFSAWLPAAM-AAPTPVSALVhsSTLVTAGVYLLIrFSFILGETcsaLLLFISIMTMFMSGVVAIF 264
Cdd:MTH00196 99 LLIIVALLFKLSVAPFHMWAPDVYeGAPTKTTALL--AIVPKLGIFSIL-VSIGLNVN---ILLIGGLFSLFVGAIGALN 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 265 EYDLKKIIALSTLSQLGMMMFSISLGLYELAFFHLLTHALFKALLFLCAGILIHGAGNTQDIRSFGGLSLNFPLVTVCMN 344
Cdd:MTH00196 173 QTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVFSIILALNVYKNLIIEFSGLSRRLPILAITLA 252
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 87083565 345 LANLSLCGVPFLAGFYSKDLIVELACQYSWgIFVLLMMFICLSLTVLYSVRL 396
Cdd:MTH00196 253 LTFLSIAGIPPLVGFLGKWLILLSGVVYQY-YLIFLLAVFCSVIAGVYYVRI 303
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
186-400 |
4.61e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 45.58 E-value: 4.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 186 LLVLLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSFILGETcsaLLLFISIMTMFMSGVVAIFE 265
Cdd:MTH00112 96 TLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPT---LLLTLAILSTLIGGWGGLNQ 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 266 YDLKKIIALSTLSQLGMMM----FSISLGLYELAFFHLLTHALFKALLFLcagilihgagNTQDIRSFGGLSLNFPLVTV 341
Cdd:MTH00112 173 TQLRKIMAFSSIAHLGWMIaiitYSPKLTLLTFYIYILMTTPMFLTLNTT----------STKTLKDMMTSWTKSPTLNT 242
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 342 CMNLANLSLCGVPFLAGFYSKDLIV-ELACQYSWGIFVLLMMFICLSLtvLYSVRLTYLS 400
Cdd:MTH00112 243 TLMLTLLSLAGLPPLTGFMPKWLILqELTKQNMTPTATIMAMLSLLSL--FFYLRLTYIS 300
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
45-90 |
7.02e-05 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 40.49 E-value: 7.02e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*.
gi 87083565 45 SSVNFSMIFLLDSMSCFFLAVVLCISGNVVWYSKSYMALDPNANRF 90
Cdd:pfam00662 5 GDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARF 50
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
186-404 |
1.02e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 45.23 E-value: 1.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 186 LLVLLAAMTKSAQIPFSAWLPAAM-AAPTPVSALVhsSTLVTAGVYLLIRFSFIlgetCSALLLFISIMTMFMSGVVAIF 264
Cdd:MTH00198 303 LFITVAILFKLAAAPFHMWTPDVYeGAPTPTTALI--AIIPKFTVYILLTSLVI----TSKLLLSVAIISLVVGAFGALN 376
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 265 EYDLKKIIALSTLSQLGMMMFSISLGLYE---LAFFHLLTHALFKALLFLCAGILIHGA-------------GNTQDIR- 327
Cdd:MTH00198 377 QTRIKRLLAYSGIGHIGFILIGVSAGTYEslqASWTYAVTYLVSALASFTVICTLEEFGtrtptsrqrdgsfGNYNLVRr 456
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 328 --SFGGLSLNFPLVTVCMNLANLSLCGVPFLAGFYSKDLI----VELACQYSWGIFVLLMMF--ICLSLTVLYSVRLT-- 397
Cdd:MTH00198 457 lvDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFIlvgsIKIAFSSSLSIYYLVALFaiICTCISAFYYIRIVat 536
|
....*...
gi 87083565 398 -YLSFVGP 404
Cdd:MTH00198 537 iYFNFTRP 544
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
18-313 |
2.55e-04 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 43.58 E-value: 2.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 18 LMFIAGFTGVFLSSEGTSIFfewflggssvNFSMIFLLDSMSCFFLAVVLCISGNVVWYSKSYMALDPNANRFILLVLGF 97
Cdd:MTH00014 30 LLLLSLFTLLNLYPMSAPYS----------MFTESLSSDMLSAPLITLTLWITALMILASFKIFQNNKAPKTFMTNILIL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 98 VASMAILILSPNILSILLgWDGLGLISYGLVI----YYPSKksSSAGMITVLSNRVGDVCILLSIAWFVSVgdfNFSIWA 173
Cdd:MTH00014 100 NLILLLTFSASNLLMFYI-FFEASLIPTLFLIlgwgYQPER--LQASFYLMIYTVTASLPLLMSILLIFYT---NNSLSM 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 174 FYNNVEFSNWVP-----LLVLLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSFI---LGETCSA 245
Cdd:MTH00014 174 LMSSMEPPSIYLmnlwwLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRMSSLfmhINKSLSA 253
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 87083565 246 LLLFISIMTMFMSGVVAIFEYDLKKIIALSTLSQLGMM---MFSISLGLYELAFFHLLTHALFKALLFLCA 313
Cdd:MTH00014 254 PFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMtagIMSNTSWGWQGALAMMIAHGLCSSALFALA 324
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
181-392 |
2.86e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 40.15 E-value: 2.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 181 SNWVPLLVLLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIrfsFILGETCSALLLFISIMTMFMSGV 260
Cdd:MTH00011 87 KNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILF---FFTSHNILPMMTSMAAMSALAGGL 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 261 VAIFEYDLKKIIALSTLSQLGMMMFsISLGLYELAFFHLLTHALFKALLFLCAGILihgagNTQDIRSFGGLSLNFPLVT 340
Cdd:MTH00011 164 GGMNQTQLRPLLAYSSIGHMGWMTM-ISVFSPSMAILYFMTYIIITTPLMLLFAYL-----NAFSTKFNSKISSMSQTTS 237
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 87083565 341 VCMNLANLSLCGVPFLAGFYSKDLIVELACQYSwgIFVLLMMFICLSLTVLY 392
Cdd:MTH00011 238 MSLFIMLLSLGGLPPFTGFMPKLMAIETLTSNS--MILILLVLIVGSLMNLF 287
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
90-400 |
5.00e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 39.18 E-value: 5.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 90 FILLVLGFVASMAILILSPNILSILLGWDGLGLISYGLVIYYPSKKSSSAGMITVLSNRVGDVCILLSIAWFvSVGDFNF 169
Cdd:MTH00200 6 LPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLN-AWTSGQW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 170 SIWAFYNNVEFsnwvpLLVLLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSFILGetcSALLLF 249
Cdd:MTH00200 85 GISEMLGPLSE-----TLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALN---SNILLL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 250 ISIMTMFMSGVVAIFEYDLKKIIALSTLSQLG----MMMFSISLGLYELAFFHLLTHALFKALLFLcagilihgagNTQD 325
Cdd:MTH00200 157 LGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGwllsGLVYSPNLALLYLLLYVIITLTVFLLLNLL----------NSTK 226
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 87083565 326 IRSFGGLSLNFPLVTVCMNLANLSLCGVPFLAGFYSKDLIV-ELACQYSWGIFVLLMMFICLSLTvlYSVRLTYLS 400
Cdd:MTH00200 227 INSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILqELSKQGLFIYATILLLGSLLSLF--FYLRLSYLT 300
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
169-402 |
5.18e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 39.27 E-value: 5.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 169 FSIWAFYNNVEFSNWVPLLVLLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSFILGetcsaLLL 248
Cdd:MTH00197 66 MGGSLSFSNLYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSFM-----GLL 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 249 FISIMTMFMSGVVAIFEYDLKKIIALSTLSQLGMM----MFSISLGLYELAFFHLLTHALFkallflcagiLIHGAGNTQ 324
Cdd:MTH00197 141 ICSVLSSLIGGIGGMNQSNIRQLLAYSSIGHTGWMlmslVYSPSIFMLYYLIYFVIMFMLF----------LFLSKNNLS 210
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 87083565 325 DIRSFGGLSLNFPLVTVCMNLANLSLCGVPFLAGFYSKDLIVELACQY-SWGIFVLLMMFICLSLTVLYSVRLTYLSFV 402
Cdd:MTH00197 211 SLNQQYSNPESMSSNLVFLGLSFLSLGGLPPLSGFFLKWLILTSLLSSnISLITFMLILSTCFSLYYYLSLAYKSLILS 289
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
179-393 |
9.68e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 38.77 E-value: 9.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 179 EFSNWVPLLVLLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFSFILGE---TCSALLLFISIMTM 255
Cdd:MTH00206 186 WNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILILGPstkLSSYFFIILGLWGS 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 87083565 256 FMSGVVAIFEYDLKKIIALSTLSQLGMMMFSISLGL---YELAFFHLLTHALFKALLFlCAGILIHGAGNTQDIRSFGGL 332
Cdd:MTH00206 266 IMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSpwgFKGALLLMIAHGLVSSALF-CLANLLYERSHTRTILGNRGL 344
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 87083565 333 SLNFPLVTVCMNLANLSLCGVPFLAGFYSKDLIVELAcqYSWGIFVLLMMFICLSLTVLYS 393
Cdd:MTH00206 345 QMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSL--FSWSNFTLPLLGLGFLFTAIYS 403
|
|
| |
