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Conserved domains on  [gi|187473877|gb|ACD11688|]
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cytochrome b, partial (mitochondrion) [Archaeolemur majori]

Protein Classification

cytochrome b( domain architecture ID 999999)

cytochrome b is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain; contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis

CATH:  1.20.810.10
Gene Ontology:  GO:0009055|GO:0046872|GO:0022904|GO:0005743|GO:0020037
PubMed:  2509716|8329437
SCOP:  4002208

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CYTB super family cl31797
cytochrome b; Provisional
 1-89 2.94e-60

cytochrome b; Provisional


The actual alignment was detected with superfamily member MTH00100:

Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 187.54  E-value: 2.94e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187473877   1 FGSLLGTCLILQIVTGLFLAMHYTADAVTAFSSVAHICRDVNYGWIIRYIHANGASMFFLCLFIHVGRGIYYGSFMFSKT 80
Cdd:MTH00100  33 FGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSYLFLET 112


                 ....*....
gi 187473877  81 WNTGIMLLL 89
Cdd:MTH00100 113 WNIGIILLF 121
 
Name Accession Description Interval E-value
CYTB MTH00100
cytochrome b; Provisional
 1-89 2.94e-60

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 187.54  E-value: 2.94e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187473877   1 FGSLLGTCLILQIVTGLFLAMHYTADAVTAFSSVAHICRDVNYGWIIRYIHANGASMFFLCLFIHVGRGIYYGSFMFSKT 80
Cdd:MTH00100  33 FGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSYLFLET 112


                 ....*....
gi 187473877  81 WNTGIMLLL 89
Cdd:MTH00100 113 WNIGIILLF 121
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 1-89 2.13e-34

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 116.31  E-value: 2.13e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187473877   1 FGSLLGTCLILQIVTGLFLAMHYTADAVTAFSSVAHICRDVNYGWIIRYIHANGASMFFLCLFIHVGRGIYYGSFM--FS 78
Cdd:cd00284   25 FGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLHIFRGLYYGSYKkpRE 104

                         90
                 ....*....|.
gi 187473877  79 KTWNTGIMLLL 89
Cdd:cd00284  105 LTWVIGVILLL 115
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
1-89 1.94e-31

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 108.24  E-value: 1.94e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187473877    1 FGSLLGTCLILQIVTGLFLAMHYTADAVTAFSSVAHICRDVNYGWIIRYIHANGASMFFLCLFIHVGRGIYYGSF--MFS 78
Cdd:pfam00033  16 FGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLHIFRGLYYGGFsyPRE 95

                          90
                  ....*....|.
gi 187473877   79 KTWNTGIMLLL 89
Cdd:pfam00033  96 LTWVIGVILLV 106
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
1-89 1.48e-29

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 107.95  E-value: 1.48e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187473877   1 FGSLLGTCLILQIVTGLFLAMHYTADAVTAFSSVAHICRDVNYGWIIRYIHANGASMFFLCLFIHVGRGIYYGSFmfsK- 79
Cdd:COG1290   42 FGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRGFFYGAY---Kk 118

                         90
                 ....*....|....
gi 187473877  80 ----TWNTGIMLLL 89
Cdd:COG1290  119 prelNWIIGVLLLL 132
 
Name Accession Description Interval E-value
CYTB MTH00100
cytochrome b; Provisional
 1-89 2.94e-60

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 187.54  E-value: 2.94e-60
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187473877   1 FGSLLGTCLILQIVTGLFLAMHYTADAVTAFSSVAHICRDVNYGWIIRYIHANGASMFFLCLFIHVGRGIYYGSFMFSKT 80
Cdd:MTH00100  33 FGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSYLFLET 112


                 ....*....
gi 187473877  81 WNTGIMLLL 89
Cdd:MTH00100 113 WNIGIILLF 121
CYTB MTH00119
cytochrome b; Provisional
 1-89 4.20e-54

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 171.62  E-value: 4.20e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187473877   1 FGSLLGTCLILQIVTGLFLAMHYTADAVTAFSSVAHICRDVNYGWIIRYIHANGASMFFLCLFIHVGRGIYYGSFMFSKT 80
Cdd:MTH00119  34 FGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFICIYLHIGRGLYYGSYLYKET 113


                 ....*....
gi 187473877  81 WNTGIMLLL 89
Cdd:MTH00119 114 WNTGVILLL 122
CYTB MTH00074
cytochrome b; Provisional
 1-89 2.68e-52

cytochrome b; Provisional


Pssm-ID: 177145 [Multi-domain]  Cd Length: 380  Bit Score: 167.17  E-value: 2.68e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187473877   1 FGSLLGTCLILQIVTGLFLAMHYTADAVTAFSSVAHICRDVNYGWIIRYIHANGASMFFLCLFIHVGRGIYYGSFMFSKT 80
Cdd:MTH00074  34 FGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANGASFFFICIYLHIGRGLYYGSYMYKET 113


                 ....*....
gi 187473877  81 WNTGIMLLL 89
Cdd:MTH00074 114 WNIGVILLF 122
CYTB MTH00131
cytochrome b; Provisional
 1-89 4.82e-52

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 166.37  E-value: 4.82e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187473877   1 FGSLLGTCLILQIVTGLFLAMHYTADAVTAFSSVAHICRDVNYGWIIRYIHANGASMFFLCLFIHVGRGIYYGSFMFSKT 80
Cdd:MTH00131  33 FGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFFICIYLHIGRGLYYGSYLYKET 112


                 ....*....
gi 187473877  81 WNTGIMLLL 89
Cdd:MTH00131 113 WNIGVVLLL 121
CYTB MTH00156
cytochrome b; Provisional
 1-89 5.11e-52

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 165.73  E-value: 5.11e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187473877   1 FGSLLGTCLILQIVTGLFLAMHYTADAVTAFSSVAHICRDVNYGWIIRYIHANGASMFFLCLFIHVGRGIYYGSFMFSKT 80
Cdd:MTH00156  23 FGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFFICIYLHIGRGIYYGSYKLKHT 102


                 ....*....
gi 187473877  81 WNTGIMLLL 89
Cdd:MTH00156 103 WMSGVIILF 111
CYTB MTH00191
cytochrome b; Provisional
 1-89 4.22e-51

cytochrome b; Provisional


Pssm-ID: 177239 [Multi-domain]  Cd Length: 365  Bit Score: 163.55  E-value: 4.22e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187473877   1 FGSLLGTCLILQIVTGLFLAMHYTADAVTAFSSVAHICRDVNYGWIIRYIHANGASMFFLCLFIHVGRGIYYGSFMFSKT 80
Cdd:MTH00191  30 FGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANGASFFFICIYLHIGRGLYYGSYLNKET 109


                 ....*....
gi 187473877  81 WNTGIMLLL 89
Cdd:MTH00191 110 WNVGVILLI 118
CYTB MTH00145
cytochrome b; Provisional
 1-89 1.42e-47

cytochrome b; Provisional


Pssm-ID: 177203 [Multi-domain]  Cd Length: 379  Bit Score: 155.06  E-value: 1.42e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187473877   1 FGSLLGTCLILQIVTGLFLAMHYTADAVTAFSSVAHICRDVNYGWIIRYIHANGASMFFLCLFIHVGRGIYYGSFMFSKT 80
Cdd:MTH00145  34 FGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANGASFFFICIYLHIGRGLYYGSYLMQHT 113


                 ....*....
gi 187473877  81 WNTGIMLLL 89
Cdd:MTH00145 114 WNIGVTLLL 122
CYTB MTH00034
cytochrome b; Validated
 1-89 1.83e-46

cytochrome b; Validated


Pssm-ID: 177109 [Multi-domain]  Cd Length: 379  Bit Score: 152.17  E-value: 1.83e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187473877   1 FGSLLGTCLILQIVTGLFLAMHYTADAVTAFSSVAHICRDVNYGWIIRYIHANGASMFFLCLFIHVGRGIYYGSFMFSKT 80
Cdd:MTH00034  33 FGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANGASLFFICLYFHIGRGLYYGSYVNIET 112


                 ....*....
gi 187473877  81 WNTGIMLLL 89
Cdd:MTH00034 113 WNIGVILFL 121
CYTB MTH00016
cytochrome b; Validated
 1-89 9.70e-45

cytochrome b; Validated


Pssm-ID: 177102 [Multi-domain]  Cd Length: 378  Bit Score: 147.52  E-value: 9.70e-45
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187473877   1 FGSLLGTCLILQIVTGLFLAMHYTADAVTAFSSVAHICRDVNYGWIIRYIHANGASMFFLCLFIHVGRGIYYGSFMFSKT 80
Cdd:MTH00016  34 FGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHANGASFFFICLYLHIGRGIYYGSYFLMET 113


                 ....*....
gi 187473877  81 WNTGIMLLL 89
Cdd:MTH00016 114 WNIGVILLL 122
CYTB MTH00224
cytochrome b; Provisional
 1-89 1.31e-39

cytochrome b; Provisional


Pssm-ID: 164767 [Multi-domain]  Cd Length: 379  Bit Score: 134.28  E-value: 1.31e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187473877   1 FGSLLGTCLILQIVTGLFLAMHYTADAVTAFSSVAHICRDVNYGWIIRYIHANGASMFFLCLFIHVGRGIYYGSFMFSKT 80
Cdd:MTH00224  34 YGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHANGASMFFLFIYLHVGRGLYYGSFNLSET 113


                 ....*....
gi 187473877  81 WNTGIMLLL 89
Cdd:MTH00224 114 WNIGVILFI 122
CYTB MTH00053
cytochrome b; Provisional
 1-89 2.03e-39

cytochrome b; Provisional


Pssm-ID: 164624 [Multi-domain]  Cd Length: 381  Bit Score: 133.68  E-value: 2.03e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187473877   1 FGSLLGTCLILQIVTGLFLAMHYTADAVTAFSSVAHICRDVNYGWIIRYIHANGASMFFLCLFIHVGRGIYYGSFMFSKT 80
Cdd:MTH00053  34 FGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHANGASMFFLCVYFHIGRGIYYGSYTKIIV 113


                 ....*....
gi 187473877  81 WNTGIMLLL 89
Cdd:MTH00053 114 WNVGVLIFL 122
CYTB MTH00022
cytochrome b; Validated
 1-89 5.44e-39

cytochrome b; Validated


Pssm-ID: 164595 [Multi-domain]  Cd Length: 379  Bit Score: 132.52  E-value: 5.44e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187473877   1 FGSLLGTCLILQIVTGLFLAMHYTADAVTAFSSVAHICRDVNYGWIIRYIHANGASMFFLCLFIHVGRGIYYGSFMFSKT 80
Cdd:MTH00022  32 FGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHANGASLFFLCLYIHIGRGLYYGGYLKFHV 111


                 ....*....
gi 187473877  81 WNTGIMLLL 89
Cdd:MTH00022 112 WNVGVVIFL 120
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 1-89 2.13e-34

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 116.31  E-value: 2.13e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187473877   1 FGSLLGTCLILQIVTGLFLAMHYTADAVTAFSSVAHICRDVNYGWIIRYIHANGASMFFLCLFIHVGRGIYYGSFM--FS 78
Cdd:cd00284   25 FGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLHIFRGLYYGSYKkpRE 104

                         90
                 ....*....|.
gi 187473877  79 KTWNTGIMLLL 89
Cdd:cd00284  105 LTWVIGVILLL 115
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
1-89 1.94e-31

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 108.24  E-value: 1.94e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187473877    1 FGSLLGTCLILQIVTGLFLAMHYTADAVTAFSSVAHICRDVNYGWIIRYIHANGASMFFLCLFIHVGRGIYYGSF--MFS 78
Cdd:pfam00033  16 FGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLHIFRGLYYGGFsyPRE 95

                          90
                  ....*....|.
gi 187473877   79 KTWNTGIMLLL 89
Cdd:pfam00033  96 LTWVIGVILLV 106
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
1-89 1.48e-29

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 107.95  E-value: 1.48e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187473877   1 FGSLLGTCLILQIVTGLFLAMHYTADAVTAFSSVAHICRDVNYGWIIRYIHANGASMFFLCLFIHVGRGIYYGSFmfsK- 79
Cdd:COG1290   42 FGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRGFFYGAY---Kk 118

                         90
                 ....*....|....
gi 187473877  80 ----TWNTGIMLLL 89
Cdd:COG1290  119 prelNWIIGVLLLL 132
CYTB MTH00033
cytochrome b; Provisional
 1-89 1.55e-29

cytochrome b; Provisional


Pssm-ID: 133672 [Multi-domain]  Cd Length: 383  Bit Score: 107.72  E-value: 1.55e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187473877   1 FGSLLGTCLILQIVTGLFLAMHYTADAVTAFSSVAHICRDVNYGWIIRYIHANGASMFFLCLFIHVGRGIYYGSFMFSKT 80
Cdd:MTH00033  30 FGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVYCHIGRGLYYGGYSRVLT 109


                 ....*....
gi 187473877  81 WNTGIMLLL 89
Cdd:MTH00033 110 WIVGVLIFF 118
CYTB MTH00086
cytochrome b; Provisional
 1-89 3.30e-25

cytochrome b; Provisional


Pssm-ID: 177151 [Multi-domain]  Cd Length: 355  Bit Score: 95.78  E-value: 3.30e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187473877   1 FGSLLGTCLILQIVTGLFLAMHYTADAVTAFSSVAHICRDVNYGWIIRYIHANGASMFFLCLFIHVGRGIYYGSFMFSKT 80
Cdd:MTH00086  22 FGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFLYLHIFKGLFMMSYRLKKV 101


                 ....*....
gi 187473877  81 WNTGIMLLL 89
Cdd:MTH00086 102 WISGLTIYL 110
PRK03735 PRK03735
cytochrome b6; Provisional
 1-87 9.06e-18

cytochrome b6; Provisional


Pssm-ID: 179639  Cd Length: 223  Bit Score: 73.98  E-value: 9.06e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187473877   1 FGSLLGTCLILQIVTGLFLAMHYTADAVTAFSSVAHICRDVNYGWIIRYIHANGASMFFLCLFIHVGRGIYYGSFMFSK- 79
Cdd:PRK03735  44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123


                 ....*....
gi 187473877  80 -TWNTGIML 87
Cdd:PRK03735 124 lNWVVGVLI 132
petB CHL00070
cytochrome b6
 1-87 3.31e-15

cytochrome b6


Pssm-ID: 177009  Cd Length: 215  Bit Score: 67.05  E-value: 3.31e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187473877   1 FGSLLGTCLILQIVTGLFLAMHYTADAVTAFSSVAHICRDVNYGWIIRYIHANGASMFFLCLFIHVGRGIYYGSFMFSK- 79
Cdd:CHL00070  36 LGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRe 115


                 ....*....
gi 187473877  80 -TWNTGIML 87
Cdd:CHL00070 116 lTWVTGVVL 124
CYTB MTH00046
cytochrome b; Validated
 2-89 1.57e-14

cytochrome b; Validated


Pssm-ID: 177121 [Multi-domain]  Cd Length: 355  Bit Score: 66.54  E-value: 1.57e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 187473877   2 GSLLGTCLILQIVTGLFLAMHYTADAVTAFSSVAHICRDVNYGWIIRYIHANGASMFFLCLFIHVGRGIYYGSFMFSKTW 81
Cdd:MTH00046  25 GFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFILLFIHMGRALYYSSYSKKGVW 104


                 ....*...
gi 187473877  82 NTGIMLLL 89
Cdd:MTH00046 105 NVGFILYL 112
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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