|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
5.61e-161 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 453.90 E-value: 5.61e-161
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 1 MNPQANLIFITSLLLGTTITISSNHWVMAWAGLEINTLAILPLISKSHHPRAIEAATKYFLTQAAASALVLFSSMTNAWY 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 81 TGQWDITQLTHPTSCLILTSAIAMKLGLVPFHFWFPEVLQGSPLLTGLLLSTLMKFPPITLLYMTSPSLNPTLLTTLAIL 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 161 STALGGWMGLNQTQIRKILAFSSISHLGWMAAIIIYDPKLTLLNFYLYTMMTATVFITLNTTKVLKLSTLMTAWAKTPSL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 241 NAMLLLTLLSLAGLPPLTGFLPKWIIIQELTKQDMAPTATLISLLSLLSLFFYLRLAYCTAITLPPHTTNHMKQWRTNKS 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 219882441 321 TNITVAILTTMSIMLLPLSPMILTII 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
8.73e-19 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 85.06 E-value: 8.73e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 23 SNHWVMAWAGLEINTLAILPLI-SKSHHPRAIEAATKYFLTQAAASALVLFSSMTNAWYTGQWDITQL-----------T 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 91 HPTSCLILTSAIAMKLGLVPFHFWFPEVLQGSPLLTGLLLSTLMKFPPITLLYMTSPSLNPT------LLTTLAILSTAL 164
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSspfiqqILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 165 GGWMGLNQTQIRKILAFSSISHLGWM----AAIIIYDPKLTLLNFYLYTMMTATVF-----ITLNTTKVLKLSTLMTAWA 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMlialGAGTIYGIQAAIFHLLTHGLFSAGLFlcagsVIYRRVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 219882441 236 KTPSLNAMLLLTLLSLAGLPPLTGFLPKWIIIQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
14-298 |
1.56e-17 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 83.24 E-value: 1.56e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 14 LLGTTITISSNHWVMAWAGLEINTLAILPLIS-KSHHPRAIEAATKYFLTQAAASALVLF-SSMTNAwYTGQWDITQLTH 91
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYG-ATGSLNLAGIAA 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 92 PTS------------CLILTSAIAMKLGLVPFHFWFPEVLQGSPlltglllstlmkfPPIT-----------------LL 142
Cdd:COG1007 191 ALAagganspllllgLVLVLAGLAFKLSAVPFHMWTPDVYEGAP-------------TPVTaflatapkiaafaallrLL 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 143 YMTSPSLNP---TLLTTLAILSTALGGWMGLNQTQIRKILAFSSISHLGWM-AAIIIYDPK-LTLLNFYL--YTMMTATV 215
Cdd:COG1007 258 VEAFPGLAAdwqLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLlLGLAAGTPLgVSAALFYLlaYLFMNLGA 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 216 FITL-----NTTKVLKLSTLMTAWAKTPSLNAMLLLTLLSLAGLPPLTGFLPKWIIIQELTKQDMAPTATLISLLSLLSL 290
Cdd:COG1007 338 FAVIlllsrKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISA 417
|
....*...
gi 219882441 291 FFYLRLAY 298
Cdd:COG1007 418 YYYLRVVK 425
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
14-297 |
3.51e-16 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 79.22 E-value: 3.51e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 14 LLGTTITISSNHWVMAWAGLEINTLAILPLIS-KSHHPRAIEAATKYFLTQAAASALVLFSSMTNAWYTGQWDITQLTHP 92
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 93 TSCLILT------------SAIAMKLGLVPFHFWFPEVLQGSPLLTGLLLSTLMK---FPPITLLYMTSPS----LNPTL 153
Cdd:TIGR01770 192 LSNGMLNisllllgivlilVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKiaiFAVFLRLFLYILFgfseAWQIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 154 LTTLAILSTALGGWMGLNQTQIRKILAFSSISHLGWMAAIIIYDPKLTLLN--FYL--YTMMTATVFITLNTTKVLKLS- 228
Cdd:TIGR01770 272 LAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAvlFYIfiYALMSLGAFGVLSLLRSYKDEw 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 219882441 229 ----TLMTAWAKT-PSLNAMLLLTLLSLAGLPPLTGFLPKWIIIQELTKQDMAPTATLISLLSLLSLFFYLRLA 297
Cdd:TIGR01770 352 ieyiSDFAGLFKTnPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
5.61e-161 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 453.90 E-value: 5.61e-161
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 1 MNPQANLIFITSLLLGTTITISSNHWVMAWAGLEINTLAILPLISKSHHPRAIEAATKYFLTQAAASALVLFSSMTNAWY 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 81 TGQWDITQLTHPTSCLILTSAIAMKLGLVPFHFWFPEVLQGSPLLTGLLLSTLMKFPPITLLYMTSPSLNPTLLTTLAIL 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 161 STALGGWMGLNQTQIRKILAFSSISHLGWMAAIIIYDPKLTLLNFYLYTMMTATVFITLNTTKVLKLSTLMTAWAKTPSL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 241 NAMLLLTLLSLAGLPPLTGFLPKWIIIQELTKQDMAPTATLISLLSLLSLFFYLRLAYCTAITLPPHTTNHMKQWRTNKS 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 219882441 321 TNITVAILTTMSIMLLPLSPMILTII 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.98e-130 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 376.45 E-value: 1.98e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 1 MNPQANLIFITSLLLGTTITISSNHWVMAWAGLEINTLAILPLISKSHHPRAIEAATKYFLTQAAASALVLFSSMTNAWY 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 81 TGQWDITQLTHPTSCLILTSAIAMKLGLVPFHFWFPEVLQGSPLLTGLLLSTLMKFPPITLLYMTSPSlNPTLLTTLAIL 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 161 STALGGWMGLNQTQIRKILAFSSISHLGWMAAIIIYDPKLTLLNFYLYTMMTATVFITLNTTKVLKLSTLMTAWAKTPSL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 241 NAMLLLTLLSLAGLPPLTGFLPKWIIIQELTKQDMAPTATLISLLSLLSLFFYLRLAYCTAITLPPHTTNHMKQWRT-NK 319
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLpST 319
|
330 340
....*....|....*....|....*..
gi 219882441 320 STNITVAILTTMSIMLLPLSPMILTII 346
Cdd:MTH00135 320 QLTLPLAISTTATLMLLPLTPAILALL 346
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
2.48e-128 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 370.79 E-value: 2.48e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 1 MNPQANLIFITSLLLGTTITISSNHWVMAWAGLEINTLAILPLISKSHHPRAIEAATKYFLTQAAASALVLFSSMTNAWY 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 81 TGQWDITQLTHPTSCLILTSAIAMKLGLVPFHFWFPEVLQGSPLLTGLLLSTLMKFPPITLLYMTSPSLNPTLLTTLAIL 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 161 STALGGWMGLNQTQIRKILAFSSISHLGWMAAIIIYDPKLTLLNFYLYTMMTATVFITLNTTKVLKLSTLMTAWAKTPSL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 241 NAMLLLTLLSLAGLPPLTGFLPKWIIIQELTKQDMAPTATLISLLSLLSLFFYLRLAYCTAITLPPHTTNHMKQWRTNKS 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*.
gi 219882441 321 TNITVAILTTMSIMLLPLSPMILTII 346
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILNLF 346
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
2.25e-113 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 332.97 E-value: 2.25e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 1 MNPQANLIFITSLLLGTTITISSNHWVMAWAGLEINTLAILPLISKSHHPRAIEAATKYFLTQAAASALVLFSSMTNAWY 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 81 TGQWDITQLTHPTSCLILTSAIAMKLGLVPFHFWFPEVLQGSPLLTGLLLSTLMKFPPITLLYMTSPSLNPTLLTTLAIL 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 161 STALGGWMGLNQTQIRKILAFSSISHLGWMAAIIIYDPKLTLLNFYLYTMMTATVFITLNTTKVLKLSTLMTAWAKTPSL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 241 NAMLLLTLLSLAGLPPLTGFLPKWIIIQELTKQDMAPTATLISLLSLLSLFFYLRLAYCTAITLPPhTTNHMK-QWR-TN 318
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFP-STNNMKmKWQfEN 319
|
330 340
....*....|....*....|....*..
gi 219882441 319 KSTNITVAILTTMSIMLLPLSPMILTI 345
Cdd:MTH00105 320 TKPMTLLPTLIILSTMLLPLTPMLSIL 346
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
4.60e-94 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 283.78 E-value: 4.60e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 1 MNPQANLIFITSLLLGTTITISSNHWVMAWAGLEINTLAILPLISKSHHPRAIEAATKYFLTQAAASALVLFSSMTNAWY 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 81 TGQWDITQLTHPTSCLILTSAIAMKLGLVPFHFWFPEVLQGSPLLTGLLLSTLMKFPPITLLYMTSPSLNPTLLTTLAIL 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 161 STALGGWMGLNQTQIRKILAFSSISHLGWMAAIIIYDPKLTLLNFYLYTMMTATVFITLNTTKVLKLSTLMTAWAKTPSL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 241 NAMLLLTLLSLAGLPPLTGFLPKWIIIQELTKQDMAPTATLISLLSLLSLFFYLRLAYCTAITLPPHTTNHMKQWRTNKS 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 219882441 321 TNITVAILTTMSIMLLPLSPMILTII 346
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-336 |
3.62e-74 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 232.90 E-value: 3.62e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 1 MNPQANLIFITSLLLGTTITISSNHWVMAWAGLEINTLAILPLISKSHHPRAIEAATKYFLTQAAASALVLFSSMTNAWY 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 81 TGQWDITQLTHPTSCLILTSAIAMKLGLVPFHFWFPEVLQGSPLLTGLLLSTLMKFPPITLLYMTSPSLNPTLLTTLAIL 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 161 STALGGWMGLNQTQIRKILAFSSISHLGWMAAIIIYDPKLTLLNFYLYTMMTATVFITLNTTKVLKLSTLMTAWAKTPSL 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 241 NAMLLLTLLSLAGLPPLTGFLPKWIIIQELTKQDMAPTATLISLLSLLSLFFYLRLAYCTAITLPPHTTNHMKQWRTNKS 320
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSWRNSGN 320
|
330
....*....|....*.
gi 219882441 321 TNITVAILTTMSIMLL 336
Cdd:MTH00041 321 ITVYGVILSILSSISI 336
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
1.78e-53 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 178.86 E-value: 1.78e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 1 MNPQANLIFITSLLLGTTITISSNHWVMAWAGLEINTLAILPLISKSHHPRAIEAATKYFLTQAAASALVLFSSMTNAWy 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 81 tgqwdITQLTHPTSCLILTSAIAMKLGLVPFHFWFPEVLQGSPLLTGLLLSTLMKFPPITLLYMTspsLNPTLLTTLAIL 160
Cdd:MTH00160 81 -----NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 161 STALGGWMGLNQTQIRKILAFSSISHLGWMAAIIIYDPKLTLLNFYLYTMMTATVFITLNTTKVLKLSTLMTAWAKTPSL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 241 NAMLLLTLLSLAGLPPLTGFLPKWIIIQELTKQDMAPTATLISLLSLLSLFFYLRLAYcTAITLPPHTTNHMKQWRTNKS 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISY-SSLMLNYNKNKWNLKKKKNKF 311
|
330 340
....*....|....*....|....*
gi 219882441 321 TNITVaILTTMSIMLLPLSPMILTI 345
Cdd:MTH00160 312 SLILN-FLSFISLFGLILSSLLFLL 335
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
5-298 |
1.28e-41 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 147.73 E-value: 1.28e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 5 ANLIFITSLLLGTTITISSNHWVMAWAGLEINTLAILPLISKSHHPRAIEAATKYFLTQAAASALVLFSSMTNAWYTGQW 84
Cdd:MTH00144 5 SNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 85 DITqlthptscLILTSAIAMKLGLVPFHFWFPEVLQGSPLLTGLLLSTLMKFPPITLLYMTSPSLNP-TLLTTLAILSTA 163
Cdd:MTH00144 85 FSM--------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLaYLLCVISVLSAL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 164 LGGWMGLNQTQIRKILAFSSISHLGWMAAIIIYDPKLTLLNFYLYTMMTATVFITLNTTKVLKLSTLmtAWAKTPSLNAM 243
Cdd:MTH00144 157 VGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDL--GSLKPSYKTGL 234
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 219882441 244 LLLTLLSLAG-LPPLTGFLPKWIIIQELTKQDMAPTATLISLLSLLSLFFYLRLAY 298
Cdd:MTH00144 235 SIISLLLSLGgLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFF 290
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
7-340 |
1.35e-41 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 147.62 E-value: 1.35e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 7 LIFITSLLLGTTITISSNHWVMAWAGLEINTLAILPLISKSHHPRAIEAATKYFLTQAAASALVLFSSmtnawyTGQWDI 86
Cdd:MTH00011 9 FLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------TMMWSF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 87 TQLTHPTSCLILTSAIAMKLGLVPFHFWFPEVLQGSPLLTGLLLSTLMKFPPITLLYMTSPSLNPTLLTTLAILSTALGG 166
Cdd:MTH00011 83 PSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 167 WMGLNQTQIRKILAFSSISHLGWMAAIIIYDPKLTLLNFYLYTMMTATVFITLNTTKVLKLSTLMTAWAKTPSLNAMLLL 246
Cdd:MTH00011 163 LGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFI 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 247 TLLSLAGLPPLTGFLPKWIIIQELTKQDMAPTATLISLLSLLSLFFYLRLAYcTAITLPPHTTNhmkqwRTNKSTNITVA 326
Cdd:MTH00011 243 MLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIF-NFMYLSPTFSS-----LKSAPYEPKTK 316
|
330
....*....|....
gi 219882441 327 ILTTMSIMLLPLSP 340
Cdd:MTH00011 317 ILISMCTLSLGLIP 330
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
8-342 |
1.89e-33 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 125.94 E-value: 1.89e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 8 IFITSLLLGTTITISSNHWVMAWAGLEINTLAILPLISKSHHPRAIEAATKYFLTQAAASALVLFSSMTNAwytgqwdIT 87
Cdd:MTH00197 2 LFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSF-------SN 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 88 QLTHPTSCLILTSAIAMKLGLVPFHFWFPEVLQGSPLLTGLLLSTLMKFPPITLLymTSPSLNPTLLTTLAILSTALGGW 167
Cdd:MTH00197 75 LYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLIL--AFNSSSFMGLLICSVLSSLIGGI 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 168 MGLNQTQIRKILAFSSISHLGWMAAIIIYDPKLTLLNFYLYTMMTATVFITLNTTKVLKLSTlMTAWAKTPSLNAMLLLT 247
Cdd:MTH00197 153 GGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQ-QYSNPESMSSNLVFLGL 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 248 LLSLAG-LPPLTGFLPKWIIIQELTKQDMAPTATLISLLSLLSLFFYLRLAYCTAItlppHTTNHMKQWRTNKSTNITVA 326
Cdd:MTH00197 232 SFLSLGgLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLI----LSNWMINFLMKINLLYSGLF 307
|
330
....*....|....*.
gi 219882441 327 ILTTMSIMLLPLSPMI 342
Cdd:MTH00197 308 ILLMMMLPLLMIFTMI 323
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
8.73e-19 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 85.06 E-value: 8.73e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 23 SNHWVMAWAGLEINTLAILPLI-SKSHHPRAIEAATKYFLTQAAASALVLFSSMTNAWYTGQWDITQL-----------T 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltgglnssG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 91 HPTSCLILTSAIAMKLGLVPFHFWFPEVLQGSPLLTGLLLSTLMKFPPITLLYMTSPSLNPT------LLTTLAILSTAL 164
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSspfiqqILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 165 GGWMGLNQTQIRKILAFSSISHLGWM----AAIIIYDPKLTLLNFYLYTMMTATVF-----ITLNTTKVLKLSTLMTAWA 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMlialGAGTIYGIQAAIFHLLTHGLFSAGLFlcagsVIYRRVHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 219882441 236 KTPSLNAMLLLTLLSLAGLPPLTGFLPKWIIIQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
14-298 |
1.56e-17 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 83.24 E-value: 1.56e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 14 LLGTTITISSNHWVMAWAGLEINTLAILPLIS-KSHHPRAIEAATKYFLTQAAASALVLF-SSMTNAwYTGQWDITQLTH 91
Cdd:COG1007 112 TLGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgISLLYG-ATGSLNLAGIAA 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 92 PTS------------CLILTSAIAMKLGLVPFHFWFPEVLQGSPlltglllstlmkfPPIT-----------------LL 142
Cdd:COG1007 191 ALAagganspllllgLVLVLAGLAFKLSAVPFHMWTPDVYEGAP-------------TPVTaflatapkiaafaallrLL 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 143 YMTSPSLNP---TLLTTLAILSTALGGWMGLNQTQIRKILAFSSISHLGWM-AAIIIYDPK-LTLLNFYL--YTMMTATV 215
Cdd:COG1007 258 VEAFPGLAAdwqLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLlLGLAAGTPLgVSAALFYLlaYLFMNLGA 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 216 FITL-----NTTKVLKLSTLMTAWAKTPSLNAMLLLTLLSLAGLPPLTGFLPKWIIIQELTKQDMAPTATLISLLSLLSL 290
Cdd:COG1007 338 FAVIlllsrKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISA 417
|
....*...
gi 219882441 291 FFYLRLAY 298
Cdd:COG1007 418 YYYLRVVK 425
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-267 |
2.82e-17 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 81.62 E-value: 2.82e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 13 LLLGTTITISSNHWVMAWAGLEINTLAILPLI-SKSHHPRAIEAATKYFLTQAAASALVLFS-------------SMTNA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 79 WYTGQWDITQLTHPTSCLILTSAIAMKLGLVPFHFWFPEVLQGSPLLTGLLLSTLMKFPPITLLYMTSPSLNptLLTTLA 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNVN--ILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 159 ILSTALGGWMGLNQTQIRKILAFSSISHLGWMAAII----IYDPKLTLLNFYLYTMMTATVFITLNTTKVLK--LSTLMT 232
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIeigsFESIQASLVYLFIYIIMSICVFSIILALNVYKnlIIEFSG 239
|
250 260 270
....*....|....*....|....*....|....*
gi 219882441 233 AWAKTPSLNAMLLLTLLSLAGLPPLTGFLPKWIII 267
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLIL 274
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-296 |
5.13e-17 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 81.79 E-value: 5.13e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 14 LLGTTITISSNHWVMAWAGLEINTLAILPLIS-KSHHPRAIEAATKYFLTQAAASALVLFSSMTNAWYTGQWDITQLTHP 92
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 93 TS------------CLILTSAIAMKLGLVPFHFWFPEVLQGSPLLTGLLLSTLMK---FPPIT-LLYMTSPSLNPT---L 153
Cdd:PRK05777 193 LAdgsgnsllllfgLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaaFAVLLrLLVVAFGGLSEDwqqV 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 154 LTTLAILSTALGGWMGLNQTQIRKILAFSSISHLGWMAAIIIYDPKLTL--LNFYL--YTMMTATVF--ITLNTTKVLKL 227
Cdd:PRK05777 273 LAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsaVLFYLlaYLFMTLGAFgvISLLRRKGGEA 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 219882441 228 STLmTAWA----KTPSLNAMLLLTLLSLAGLPPLTGFLPKWIIIQELTKQDMAPTATLISLLSLLSLFFYLRL 296
Cdd:PRK05777 353 ESI-SDFAglskRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRV 424
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
14-297 |
3.51e-16 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 79.22 E-value: 3.51e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 14 LLGTTITISSNHWVMAWAGLEINTLAILPLIS-KSHHPRAIEAATKYFLTQAAASALVLFSSMTNAWYTGQWDITQLTHP 92
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 93 TSCLILT------------SAIAMKLGLVPFHFWFPEVLQGSPLLTGLLLSTLMK---FPPITLLYMTSPS----LNPTL 153
Cdd:TIGR01770 192 LSNGMLNisllllgivlilVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKiaiFAVFLRLFLYILFgfseAWQIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 154 LTTLAILSTALGGWMGLNQTQIRKILAFSSISHLGWMAAIIIYDPKLTLLN--FYL--YTMMTATVFITLNTTKVLKLS- 228
Cdd:TIGR01770 272 LAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAvlFYIfiYALMSLGAFGVLSLLRSYKDEw 351
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 219882441 229 ----TLMTAWAKT-PSLNAMLLLTLLSLAGLPPLTGFLPKWIIIQELTKQDMAPTATLISLLSLLSLFFYLRLA 297
Cdd:TIGR01770 352 ieyiSDFAGLFKTnPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
8-267 |
9.91e-16 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 77.75 E-value: 9.91e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 8 IFITSLLLGTTITISSNHWVMAWAGLEINTLAILPLIS-KSHHPRAIEAATKYFLTQAAASALVLFSSMTNAWYTGQWDI 86
Cdd:MTH00199 101 ILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSI 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 87 ----TQLTHPTSCLILTSAIAMKLGLVPFHFWFPEVLQGSPLLTGLLLSTLMKFPPITLLYMTSPSLNPTLLTtlAILST 162
Cdd:MTH00199 181 qginSILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNVVLIC--AVLSI 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 163 ALGGWMGLNQTQIRKILAFSSISHLG---WMAAIIIYDP-KLTLLNFYLYTMMTATVF---ITLNTTKVLkLSTLMTAWA 235
Cdd:MTH00199 259 IYGAIGALNQTKIKRLLAYSGIGHMGfilFGVAIGSFESiQASLIYMIIYVIMSICSFsiiLSLKLTKGL-IVEVSGLSR 337
|
250 260 270
....*....|....*....|....*....|..
gi 219882441 236 KTPSLNAMLLLTLLSLAGLPPLTGFLPKWIII 267
Cdd:MTH00199 338 KNPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
3-267 |
2.96e-12 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 67.58 E-value: 2.96e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 3 PQANLIFITSLLLGTTITISSNHWVMAWAGLEINTLAILPLISKSHHPRAI---------EAATKYFLTQAAASALVLFS 73
Cdd:MTH00198 187 PRSGFALVLIVGLGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFG 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 74 SMTNAWYTGQ----WDITQLTHPTS----------CLILTSAIAMKLGLVPFHFWFPEVLQGSPLLTGLLLSTLMKFPPI 139
Cdd:MTH00198 267 CALYFGFTGNegmlGTILSATLETTnielrqgslgYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVY 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 140 TLLymTSPSLNPTLLTTLAILSTALGGWMGLNQTQIRKILAFSSISHLGWMAAIIIYDPKLTLLNFYLY-------TMMT 212
Cdd:MTH00198 347 ILL--TSLVITSKLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYavtylvsALAS 424
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 219882441 213 ATVFITL------------------NTTKVLKLSTLMTAWAKTPSLNAMLLLTLLSLAGLPPLTGFLPKWIII 267
Cdd:MTH00198 425 FTVICTLeefgtrtptsrqrdgsfgNYNLVRRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFIL 497
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
13-268 |
2.66e-10 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 61.32 E-value: 2.66e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 13 LLLGTTITISSNHWVMAWAGLEINTLAILPLISKSHHPRAIEAATKYFLTQAAASALVLFSSMTNAWYTGQWDITQLTH- 91
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAr 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 92 ---------PTSCLILTSAIAMKLGLVPFHFWFPEVlqgsplltglllstlMKFPP----------------------IT 140
Cdd:COG0651 196 laeldpgllLAAFALLLVGFGIKAALFPLHFWLPDA---------------YPAAPspvsallsglltkvgvyailrvLT 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 141 LLYMTSPSLNP-TLLTTLAILSTALGGWMGLNQTQIRKILAFSSISHLGWM------------AAIIIYdpkltLLNfyl 207
Cdd:COG0651 261 LLFGADPALFLgTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYIllglglgtplglAGALFH-----LLN--- 332
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 219882441 208 YTMMTATVFIT----LNTTKVLKLSTLMTAWAKTPSLNAMLLLTLLSLAGLPPLTGFLPKWIIIQ 268
Cdd:COG0651 333 HALAKALLFLAagaiERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQ 397
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-340 |
9.93e-09 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 50.72 E-value: 9.93e-09
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 219882441 291 FFYLRLAYCTAITLPPHTTNHMKQWRTNKSTNIT-VAILTTMSIMLLPLSP 340
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTLlLPTLTTLSILLLPLTP 51
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
7-219 |
2.77e-08 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 55.01 E-value: 2.77e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 7 LIFITSLLLGTTITISSNHWVMAWAGLEINTLAILPLISKSHHP-RAIEAATKYFLTQAAASALVL--FSsmtnaWYTGQ 83
Cdd:CHL00049 114 LLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTKKDvRSNEATMKYLLMGGASSSILVygFS-----WLYGL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 84 -------WDI------TQLTHPTSCLI----LTSAIAMKLGLVPFHFWFPEVLQGSPLLTGLLLSTLMKFPPITL----L 142
Cdd:CHL00049 189 sggeielQEIvnglinTQMYNSPGISIalifITVGIGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAASALatriF 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 143 YMTSPSLNP---TLLTTLAILSTALGGWMGLNQTQIRKILAFSSISHLGW-MAAIIIYDPK------LTLLNFYLYTMMT 212
Cdd:CHL00049 269 DIPFYFSSNewhLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYvIIGIIVGDSNdgyasmITYMLFYIFMNLG 348
|
....*..
gi 219882441 213 ATVFITL 219
Cdd:CHL00049 349 TFACIVL 355
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-188 |
5.54e-08 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 54.29 E-value: 5.54e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 50 PRAIEAATKYFLTQAAASALVLF-SSMTNAWYTGQwdiTQL--------THPTSCLILT-----SAIAMKLGLVPFHFWF 115
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYgSSLLYGLSGGS---TQLsaialaliTSPSLGLALAlvfviAGIAFKISAVPFHQWT 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 116 PEVLQGSPLLTGLLLSTLMKFP----PITLLYMTSPSLNP---TLLTTLAILSTALGGWMGLNQTQIRKILAFSSISHLG 188
Cdd:PRK02504 234 PDVYEGSPTPVVAFLSVGSKAAgfalAIRLLVTAFPSFDEqwkLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAG 313
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
1.09e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 47.01 E-value: 1.09e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 33 LEINTLAILPLIS-KSHHPRAIEAATKYFLTQAAASALVLFS---------SMTNAWYTGQWDITQLTHPTSCL-ILTSA 101
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGiallygqygTLNMAYLAVKMSENPTVVAKIALaLFIAG 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 102 IAMKLGLVPFHFWFPEVlQGSPLLTGLLLSTLMKFPPI-----TLLYMTSPSLNPT----LLTTLAILSTALGGWMGLNQ 172
Cdd:PRK08376 230 LAMKSGAVPVHMWLPDA-YPAAPSSISAMLLVIKQAGLyalarVLFSIYGPAINLAtvgwVIIILGCLTMFVGVAMAVVQ 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 173 TQIRKILAFSSISHLGWM-----AAIIIY-DPKLT----------LLNFYLYTMMTATVFIT-------LNTTKVLKLST 229
Cdd:PRK08376 309 KDVKRLLAYHSVSQIGYMllglgVGLAALgDPAMAsygeialaggIYHIVNHALYKALLFLTagaviyeTGTRNLNELGG 388
|
250 260 270
....*....|....*....|....*....|....*...
gi 219882441 230 LmtawAKT-PSLNAMLLLTLLSLAGLPPLTGFLPKWII 266
Cdd:PRK08376 389 L----ARTmPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
49-188 |
1.61e-05 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 46.61 E-value: 1.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 49 HPRAIEAATKYFLTQAAASALVLFSSMTNAWYTGQW--DITQLTH-----PTSCLILTS---AIAMKLGLVPFHFWFPEV 118
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAAaplplTAQLLLFLAffiAFAVKVPMFPFHTWLPDA 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 119 L-QGSPLLTGLLLSTLMK-------------FPPITLLYMTspslnptLLTTLAILSTALGGWMGLNQTQIRKILAFSSI 184
Cdd:COG1008 236 HvEAPTAGSVLLAGVLLKmggygllrfalplFPEASAYFAP-------LLAALGVIGIIYGALVALAQTDLKRLIAYSSV 308
|
....
gi 219882441 185 SHLG 188
Cdd:COG1008 309 SHMG 312
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
7-190 |
4.17e-05 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 45.14 E-value: 4.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 7 LIFITSLLLgttITISSNHWVMaWAGLEINTLAILPLISKSHH-PRAIEAATKYFLTQAAASALVLFSSMTNAWYTGQWD 85
Cdd:COG1009 118 LLFMAAMLG---LVLSDNLLLL-FVFWELVGLCSYLLIGFWYEkPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLN 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 86 ITQL-----THPTSCLILTSAIAM------KLGLVPFHFWFPEvlqgsplltglllstLMKFP-PI-TLL---------- 142
Cdd:COG1009 194 FSELlaaapTILSSPLLTLILLLLllgafgKSAQFPLHFWLPD---------------AMEGPtPVsALLhaatmvkagv 258
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 219882441 143 YM---TSP--SLNPTLLTTLAI--LSTAL-GGWMGLNQTQIRKILAFSSISHLGWM 190
Cdd:COG1009 259 YLlarLSPlfALSPVWLTVVAIigAITALfAALIALAQTDIKRVLAYSTVSQLGYM 314
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
96-194 |
5.69e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 44.91 E-value: 5.69e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 96 LILTSAIAmKLGLVPFHFWFPEVLQGSPLLTGLLLSTLMKFPPITLL------YMTSPSLNPTLLtTLAILSTALGGWMG 169
Cdd:PRK12644 208 LILVGALS-KSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVarlapgFADVPVWRPTVL-VLGLATMLLGGWRA 285
|
90 100
....*....|....*....|....*
gi 219882441 170 LNQTQIRKILAFSSISHLGWMAAII 194
Cdd:PRK12644 286 LRQHDLKLILAYGTVSQLGFLTVLV 310
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-190 |
1.08e-04 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 43.77 E-value: 1.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 50 PRAIEAATKYFLTQAAASALVLFSSMTNAWYTGQW----DITQLTHPTSC-----LILTSAIAMKLGLVPFHFWFPEV-L 119
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTfdllELLNLPLPFGVqtwlfLAFFIAFAVKVPLFPLHTWLPDAhV 231
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 219882441 120 QGSPLLTGLLLSTLMKFPP-------ITLLYMTSPSLNPtLLTTLAILSTALGGWMGLNQTQIRKILAFSSISHLGWM 190
Cdd:TIGR01972 232 EAPTAGSVILAGVLLKMGTygflrfnLPLFPDASLYFAP-VLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFV 308
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
34-279 |
1.12e-04 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 43.83 E-value: 1.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 34 EINTLAILPLISKSHHpRAIEAATKYFLTQAAASALVLFSSMTNAWYTGQWDIT-------QLTHPTSCLI----LTSAI 102
Cdd:PRK08668 128 EIMTFSSFMMVPMGKK-ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFAdisqgliNDTSTGFALIvflfLLAFG 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 103 AMKLGLVPFHFWFPEV------------------LQGSPLLTGLLLSTLMKFPPITLLYMTSPSLNpTLLTTLAILSTAL 164
Cdd:PRK08668 207 VAKAGIFPLHVWAPDAyseapqsfsavlsgqlskLGAYGFLLVLYVLPGTKLFSEFGTYRGVPLFN-YILAWLGNISIIV 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 165 GGWMGLNQTQIRKILAFSSISHLGW-MAAIIIYDPKLTLLNFY----------LYTMMTATVFITLNTTKVLKLSTLmtA 233
Cdd:PRK08668 286 GTLMAILQEDIKKLIAYSSVANGGYiLVGLGLGTSLGFAGGLFhvfnhalfkgLFFLIFAAVIYRTGTTKISEMGGL--I 363
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 219882441 234 WaKTPSLNAMLLLTLLSLAGLPPLTGFLPKWIIIQELTKQDMAPTA 279
Cdd:PRK08668 364 E-KMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITA 408
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-190 |
1.10e-03 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 40.51 E-value: 1.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 13 LLLGTTITISSNHWVMAWAGLEINTLAILPLISKSHHPRAIEAATKYFLTQAAA------SALVLFSSMTNAWYTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 87 TQLTHPT----------SCLILTSAIAMKLGLVPFHFWFPEVLQGSPLLTGLLLSTLMKFPPITLLYMTSPSLNPT---- 152
Cdd:PRK08676 191 TELAAHAsllspsvlgaSFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSgaae 270
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 219882441 153 ----LLTTLAILSTALGGWMGLNQTQIRKILAFSSISHLGWM 190
Cdd:PRK08676 271 qfsnVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLM 312
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
8-191 |
2.67e-03 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 39.53 E-value: 2.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 8 IFITSLLLgttiTISSNHWVMAWAGLEINTLAILPLISKSHHPRAIEAATKYFLTQAAASALVLFSSMTnAWYTGQwdiT 87
Cdd:PRK06458 116 LFLFTMLL----ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIICSVGVAFALFGTIL-VYANAA---T 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 219882441 88 QLTHPTSCLILTSAIAM----------------------KLGLVPFHFWFPE-----------VLQGSPLLTGLLLSTLM 134
Cdd:PRK06458 188 VMGDGEMAILWTELLKHaslldptlmklafvflligfgtKVGLFPMHAWLPDahseapspvsaLLSGVLLNVALYAVLRY 267
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 219882441 135 KfppITLLYMTSPSLNPTLLTTLAILSTALGGWMGLNQTQIRKILAFSSISHLGWMA 191
Cdd:PRK06458 268 Y---ILIDAAIGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIA 321
|
|
| |
