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Conserved domains on  [gi|240271166|gb|ACS53448|]
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serpin 18 non-inhibitory serine protease inhibitor, partial [Anopheles gambiae]

Protein Classification

serpin family protein( domain architecture ID 1562504)

serpin family protein belonging to the functionally diverse SERine Proteinase INhibitor (serpin) family, which is characterized by conformational polymorphism

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
serpin super family cl38926
SERine Proteinase INhibitors (serpin) family; SERine Proteinase INhibitors (serpins) exhibit ...
1-272 9.66e-137

SERine Proteinase INhibitors (serpin) family; SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


The actual alignment was detected with superfamily member cd19599:

Pssm-ID: 476815 [Multi-domain]  Cd Length: 354  Bit Score: 389.49  E-value: 9.66e-137
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166   1 AAIEQQQRLAQQLHDGQHLKALSFVLVEETLrLDSEFERLFHRTFQTTVEPVDLTDDIPSALAVNSFYQRANTEIEDFIG 80
Cdd:cd19599   58 KAIDDLRRFLQSTNKQSHLKMLSKVYHSDEE-LNPEFLPLFQDTFGTEVETADFTDKQKVADSVNSWVDRATNGLIPDFI 136
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  81 EGDvfSLPPCHKLMLFSGVSVLTPLAIRFNPADTALELFQFINa*TQRVSTMHTTAFVRRCLHNELRCKVVDMPFDA*SG 160
Cdd:cd19599  137 EAS--SLRPDTDLMLLNAVALNARWEIPFNPEETESELFTFHN-VNGDVEVMHMTEFVRVSYHNEHDCKAVELPYEEATD 213
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 161 LSMLVLLPYDGTELRQIVNSI*PAHLAQIDERLQSCWTDLKLPKFFVREKTDPKQTLGKLGYGGVFEIDDLHVFHDSgRT 240
Cdd:cd19599  214 LSMVVILPKKKGSLQDLVNSLTPALYAKINERLKSVRGNVELPKFTIRSKIDAKQVLEKMGLGSVFENDDLDVFARS-KS 292
                        250       260       270
                 ....*....|....*....|....*....|..
gi 240271166 241 RLNGFIQHCYLAVSESGSGIPAPPDTPSEFEF 272
Cdd:cd19599  293 RLSEIRQTAVIKVDEKGTEAAAVTETQAVFRS 324
 
Name Accession Description Interval E-value
serpin18-like_insects cd19599
insect serpins similar to Anopheles gambiae Serpin 18; Serpins in insects function within ...
1-272 9.66e-137

insect serpins similar to Anopheles gambiae Serpin 18; Serpins in insects function within development, wound healing and immunity. A. gambiae serpin 18 is categorized as non-inhibitory based on the sequence of its reactive-center loop. It is expressed throughout all life stages in multiple tissues and the hemolymph, and is predicted to be secreted based on the presence of a signal peptide. Insect serpins from mosquitoes are included in this subfamily. SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381063 [Multi-domain]  Cd Length: 354  Bit Score: 389.49  E-value: 9.66e-137
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166   1 AAIEQQQRLAQQLHDGQHLKALSFVLVEETLrLDSEFERLFHRTFQTTVEPVDLTDDIPSALAVNSFYQRANTEIEDFIG 80
Cdd:cd19599   58 KAIDDLRRFLQSTNKQSHLKMLSKVYHSDEE-LNPEFLPLFQDTFGTEVETADFTDKQKVADSVNSWVDRATNGLIPDFI 136
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  81 EGDvfSLPPCHKLMLFSGVSVLTPLAIRFNPADTALELFQFINa*TQRVSTMHTTAFVRRCLHNELRCKVVDMPFDA*SG 160
Cdd:cd19599  137 EAS--SLRPDTDLMLLNAVALNARWEIPFNPEETESELFTFHN-VNGDVEVMHMTEFVRVSYHNEHDCKAVELPYEEATD 213
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 161 LSMLVLLPYDGTELRQIVNSI*PAHLAQIDERLQSCWTDLKLPKFFVREKTDPKQTLGKLGYGGVFEIDDLHVFHDSgRT 240
Cdd:cd19599  214 LSMVVILPKKKGSLQDLVNSLTPALYAKINERLKSVRGNVELPKFTIRSKIDAKQVLEKMGLGSVFENDDLDVFARS-KS 292
                        250       260       270
                 ....*....|....*....|....*....|..
gi 240271166 241 RLNGFIQHCYLAVSESGSGIPAPPDTPSEFEF 272
Cdd:cd19599  293 RLSEIRQTAVIKVDEKGTEAAAVTETQAVFRS 324
Serpin pfam00079
Serpin (serine protease inhibitor); Structure is a multi-domain fold containing a bundle of ...
4-272 3.21e-47

Serpin (serine protease inhibitor); Structure is a multi-domain fold containing a bundle of helices and a beta sandwich.


Pssm-ID: 459662 [Multi-domain]  Cd Length: 368  Bit Score: 161.26  E-value: 3.21e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166    4 EQQQRLAQQLH---DGQHLKALSFVLVEETLRLDSEFERLFHRTFQTTVEPVDLTDDIPSALAVNSFYQRA-NTEIEDFI 79
Cdd:pfam00079  65 QGFQKLLQSLNkpdKGYELKLANALFVEKGLKLKPDFLQLAKKYYGAEVESVDFSDPSEARKKINSWVEKKtNGKIKDLL 144
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166   80 GEGdvfsLPPCHKLMLFSGVSVLTPLAIRFNPADTALELFQFINA*TQRVSTMHTTAFVRRCLHNELRCKVVDMPFDa*S 159
Cdd:pfam00079 145 PEG----LDSDTRLVLVNAIYFKGKWKTPFDPENTREEPFHVNEGTTVKVPMMSQEGQFRYAEDEELGFKVLELPYK--G 218
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  160 GLSMLVLLPYDGTELRQIVNSI*PAHLAQIDERLQSCWTD-LKLPKFFVREKTDPKQTLGKLGYGGVFEID-DLHVFHDS 237
Cdd:pfam00079 219 NLSMLIILPDEIGGLEELEKSLTAETLLEWTSSLKMRKVReLSLPKFKIEYSYDLKDVLKKLGITDAFSEEaDFSGISDD 298
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 240271166  238 GRTRLNGFIQHCYLAVSESGS--------GIPAPPDTPSEFEF 272
Cdd:pfam00079 299 EPLYVSEVVHKAFIEVNEEGTeaaaatgvVVVLLSAPPSPPEF 341
SERPIN smart00093
SERine Proteinase INhibitors;
27-272 1.74e-18

SERine Proteinase INhibitors;


Pssm-ID: 214513 [Multi-domain]  Cd Length: 359  Bit Score: 83.77  E-value: 1.74e-18
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166    27 VEETLRLDSEFERLFHRTFQTTVEPVDLTDDIPSAL-AVNSFYQRA-NTEIEDFIGEgdvfsLPPCHKLML-----FSGV 99
Cdd:smart00093  86 VDKSLKLKDSFLEDIKKLYGAEVQSVDFSDKAEEAKkQINDWVEKKtQGKIKDLLSD-----LDSDTRLVLvnaiyFKGK 160
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166   100 svltpLAIRFNPADTALELFQFINA*TQRVSTMHTTAFVRRCLH-NELRCKVVDMPFda*SGLSMLVLLPYDGtELRQIV 178
Cdd:smart00093 161 -----WKTPFDPELTREEDFHVDETTTVKVPMMSQTGRTFNYGHdEELNCQVLELPY--KGNASMLIILPDEG-GLEKLE 232
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166   179 NSI*PAHLAQIDERLQSCWTDLKLPKFFVREKTDPKQTLGKLGYGGVFEID-DLhvfhdSGRT-----RLNGFIQHCYLA 252
Cdd:smart00093 233 KALTPETLKKWMKSLTKRSVELYLPKFKIEGTYDLKDVLEKLGITDLFSNKaDL-----SGISedkdlKVSKVLHKAVLE 307
                          250       260
                   ....*....|....*....|....*..
gi 240271166   253 VSESG-------SGIPAPPDTPSEFEF 272
Cdd:smart00093 308 VNEEGteaaaatGVIAVPRSLPPEFKA 334
SERPIN COG4826
Serine protease inhibitor [Posttranslational modification, protein turnover, chaperones];
27-270 6.34e-14

Serine protease inhibitor [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443854 [Multi-domain]  Cd Length: 411  Bit Score: 71.08  E-value: 6.34e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  27 VEETLRLDSEFERLFHRTFQTTVEPVDLTDDIPSALAVNSFYQRaNTE--IEDFIGEgdvfSLPPCHKLML-----FSGv 99
Cdd:COG4826  135 AREGFTFKPDFLDTLADYYGAGVTSLDFSNDEAARDTINKWVSE-KTNgkIKDLLPP----AIDPDTRLVLtnaiyFKG- 208
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 100 svltPLAIRFNPADTALELFQFINA*TQRVSTMHTTAFVRRCLHNELrcKVVDMPFdA*SGLSMLVLLPYDGTELRQIVN 179
Cdd:COG4826  209 ----AWATPFDKSDTEDAPFTLADGSTVQVPMMHQTGTFPYAEGDGF--QAVELPY-GGGELSMVVILPKEGGSLEDFEA 281
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 180 SI*PAHLAQIDERLQSCWTDLKLPKFFVREKTDPKQTLGKLGYGGVFEID-DLHVFHDSGRTRLNGFIQHCYLAVSESGS 258
Cdd:COG4826  282 SLTAENLAEILSSLSSQEVDLSLPKFKFEYEFELKDALKALGMPDAFTDAaDFSGMTDGENLYISDVIHKAFIEVDEEGT 361
                        250       260
                 ....*....|....*....|..
gi 240271166 259 ----------GIPAPPDTPSEF 270
Cdd:COG4826  362 eaaaatavgmELTSAPPEPVEF 383
 
Name Accession Description Interval E-value
serpin18-like_insects cd19599
insect serpins similar to Anopheles gambiae Serpin 18; Serpins in insects function within ...
1-272 9.66e-137

insect serpins similar to Anopheles gambiae Serpin 18; Serpins in insects function within development, wound healing and immunity. A. gambiae serpin 18 is categorized as non-inhibitory based on the sequence of its reactive-center loop. It is expressed throughout all life stages in multiple tissues and the hemolymph, and is predicted to be secreted based on the presence of a signal peptide. Insect serpins from mosquitoes are included in this subfamily. SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381063 [Multi-domain]  Cd Length: 354  Bit Score: 389.49  E-value: 9.66e-137
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166   1 AAIEQQQRLAQQLHDGQHLKALSFVLVEETLrLDSEFERLFHRTFQTTVEPVDLTDDIPSALAVNSFYQRANTEIEDFIG 80
Cdd:cd19599   58 KAIDDLRRFLQSTNKQSHLKMLSKVYHSDEE-LNPEFLPLFQDTFGTEVETADFTDKQKVADSVNSWVDRATNGLIPDFI 136
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  81 EGDvfSLPPCHKLMLFSGVSVLTPLAIRFNPADTALELFQFINa*TQRVSTMHTTAFVRRCLHNELRCKVVDMPFDA*SG 160
Cdd:cd19599  137 EAS--SLRPDTDLMLLNAVALNARWEIPFNPEETESELFTFHN-VNGDVEVMHMTEFVRVSYHNEHDCKAVELPYEEATD 213
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 161 LSMLVLLPYDGTELRQIVNSI*PAHLAQIDERLQSCWTDLKLPKFFVREKTDPKQTLGKLGYGGVFEIDDLHVFHDSgRT 240
Cdd:cd19599  214 LSMVVILPKKKGSLQDLVNSLTPALYAKINERLKSVRGNVELPKFTIRSKIDAKQVLEKMGLGSVFENDDLDVFARS-KS 292
                        250       260       270
                 ....*....|....*....|....*....|..
gi 240271166 241 RLNGFIQHCYLAVSESGSGIPAPPDTPSEFEF 272
Cdd:cd19599  293 RLSEIRQTAVIKVDEKGTEAAAVTETQAVFRS 324
Serpin pfam00079
Serpin (serine protease inhibitor); Structure is a multi-domain fold containing a bundle of ...
4-272 3.21e-47

Serpin (serine protease inhibitor); Structure is a multi-domain fold containing a bundle of helices and a beta sandwich.


Pssm-ID: 459662 [Multi-domain]  Cd Length: 368  Bit Score: 161.26  E-value: 3.21e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166    4 EQQQRLAQQLH---DGQHLKALSFVLVEETLRLDSEFERLFHRTFQTTVEPVDLTDDIPSALAVNSFYQRA-NTEIEDFI 79
Cdd:pfam00079  65 QGFQKLLQSLNkpdKGYELKLANALFVEKGLKLKPDFLQLAKKYYGAEVESVDFSDPSEARKKINSWVEKKtNGKIKDLL 144
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166   80 GEGdvfsLPPCHKLMLFSGVSVLTPLAIRFNPADTALELFQFINA*TQRVSTMHTTAFVRRCLHNELRCKVVDMPFDa*S 159
Cdd:pfam00079 145 PEG----LDSDTRLVLVNAIYFKGKWKTPFDPENTREEPFHVNEGTTVKVPMMSQEGQFRYAEDEELGFKVLELPYK--G 218
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  160 GLSMLVLLPYDGTELRQIVNSI*PAHLAQIDERLQSCWTD-LKLPKFFVREKTDPKQTLGKLGYGGVFEID-DLHVFHDS 237
Cdd:pfam00079 219 NLSMLIILPDEIGGLEELEKSLTAETLLEWTSSLKMRKVReLSLPKFKIEYSYDLKDVLKKLGITDAFSEEaDFSGISDD 298
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 240271166  238 GRTRLNGFIQHCYLAVSESGS--------GIPAPPDTPSEFEF 272
Cdd:pfam00079 299 EPLYVSEVVHKAFIEVNEEGTeaaaatgvVVVLLSAPPSPPEF 341
serpin cd00172
SERine Proteinase INhibitors (serpin) family; SERine Proteinase INhibitors (serpins) exhibit ...
4-258 7.89e-41

SERine Proteinase INhibitors (serpin) family; SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381000 [Multi-domain]  Cd Length: 365  Bit Score: 144.34  E-value: 7.89e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166   4 EQQQRLAQQLHD---GQHLKALSFVLVEETLRLDSEFERLFHRTFQTTVEPVDLTDDIPSALAVNSFYQRA-NTEIEDFI 79
Cdd:cd00172   64 SAFKELLSSLKSsneNYTLKLANRIFVDKGFELKEDFKDALKKYYGAEVESVDFSNPEEARKEINKWVEEKtNGKIKDLL 143
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  80 GEGdvfSLPPCHKLMLFSGVSVLTPLAIRFNPADTALELFQFINA*TQRVSTMHTTAFVRRCLHNELRCKVVDMPFDa*S 159
Cdd:cd00172  144 PPG---SIDPDTRLVLVNAIYFKGKWKKPFDPELTRKEPFYLSDGKTVKVPMMHQKGKFKYAEDEDLGAQVLELPYK-GD 219
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 160 GLSMLVLLPYDGTELRQIVNSI*PAHLAQIDERLQSCWTDLKLPKFFVREKTDPKQTLGKLGYGGVFEI--DDLHVFHDS 237
Cdd:cd00172  220 RLSMVIILPKEGDGLAELEKSLTPELLSKLLSSLKPTEVELTLPKFKLESSYDLKEVLKKLGITDAFSPgaADLSGISSN 299
                        250       260
                 ....*....|....*....|.
gi 240271166 238 GRTRLNGFIQHCYLAVSESGS 258
Cdd:cd00172  300 KPLYVSDVIHKAFIEVDEEGT 320
serpin42Dd-like_insects cd19954
insect serpins similar to Drosophila melanogaster Serpin 42Dd; Serpins in insects function ...
1-262 1.96e-24

insect serpins similar to Drosophila melanogaster Serpin 42Dd; Serpins in insects function within development, wound healing and immunity. Drosophila melanogaster Serpin 42Dd, also called serpin 1 (Spn1), regulates Toll-mediated immune responses, functioning as a repressor of Toll activation upon fungal infection. Insect serpins from house flies, fruit flies, and stable flies are included in this subfamily. SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381070 [Multi-domain]  Cd Length: 366  Bit Score: 100.36  E-value: 1.96e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166   1 AAIEQQQRLAQQLHD--GQHLKALSFVLVEETLRLDSEFERLFHRTFQTTVEPVDLTDDIPSALAVNSFY-QRANTEIED 77
Cdd:cd19954   62 EVAKKYKELLQKLEQreGATLKLANRLYVNERLKILPEYQKLAREYFNAEAEAVNFADPAKAADIINKWVaQQTNGKIKD 141
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  78 FIgegDVFSLPPCHKLMLFSGVSVLTPLAIRFNPADTALELFQFINA*TQRVSTMHTTAFVRRCLHNELRCKVVDMPFdA 157
Cdd:cd19954  142 LV---TPSDLDPDTKALLVNAIYFKGKWQKPFDPKDTKKRDFYVSPGRSVPVDMMYQDDNFRYGELPELDATAIELPY-A 217
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 158 *SGLSMLVLLPY--DGteLRQIVNSI*PAHLAQIDERLQSCWTDLKLPKFFVREKTDPKQTLGKLGYGGVF-EIDDLHVF 234
Cdd:cd19954  218 NSNLSMLIILPNevDG--LAKLEQKLKELDLNELTERLQMEEVTLKLPKFKIEFDLDLKEPLKKLGINEIFtDSADFSGL 295
                        250       260
                 ....*....|....*....|....*...
gi 240271166 235 HDSGRTRLNGFIQHCYLAVSESGSGIPA 262
Cdd:cd19954  296 LAKSGLKISKVLHKAFIEVNEAGTEAAA 323
serpin42Da-like cd19601
serpins similar to Drosophila melanogaster Serpin 42Da; This subfamily is composed mainly of ...
27-227 5.71e-21

serpins similar to Drosophila melanogaster Serpin 42Da; This subfamily is composed mainly of insect serpins, including Drosophila melanogaster serpin 42Da. Serpins in insects function within development, wound healing and immunity. Serpin 42Da, previously serpin 4, is a serine protease inhibitor that is capable of remarkable functional diversity through the alternative splicing of four different reactive center loop exons. Insect serpins from stink bug, alfalfa leafcutting bee, red flour beetle, house fly, and brown planthopper are also included in this subfamily. SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381065 [Multi-domain]  Cd Length: 361  Bit Score: 90.65  E-value: 5.71e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  27 VEETLRLDSEFERLFHRTFQTTVEPVDLTDDIPSALAVNSFYQR-ANTEIEDFIGEGDVFSLPpchKLMLFSGVSVLTPL 105
Cdd:cd19601   87 VAKGFELKPEFKSILTNYFRSEAENVDFSNSEEAAKTINSWVEEkTNNKIKDLISPDDLDEDT---RLVLVNAIYFKGEW 163
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 106 AIRFNPADTALELFQFINA*TQRVSTMHTTAFVRRCLHNELRCKVVDMPFDA*SGLSMLVLLPYDGTELRQIVNSI*PAH 185
Cdd:cd19601  164 KKKFDKKNTKERPFHVDETTTKKVPMMYKKGKFKYGELPDLDAKFIELPYKN-SDLSMVIILPNEIDGLKDLEENLKKLN 242
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 240271166 186 LAQIDERLQSCWTDLKLPKFFVREKTDPKQTLGKLGYGGVFE 227
Cdd:cd19601  243 LSDLLSSLRKREVELYLPKFKIESTIDLKDILKKLGMKDMFS 284
serpinJ_IRS-2-like cd19577
serpin family J, Ixodes ricinus serpin-2 (IRS-2); The serpin family J clade contains serpins ...
7-227 1.19e-18

serpin family J, Ixodes ricinus serpin-2 (IRS-2); The serpin family J clade contains serpins from the Chelicerates. This model includes serpins from the Japanese horseshoe crab, mites, ticks, and spiders. The Limulus intracellular coagulation inhibitor, designated LICI, was isolated from hemocytes of the Japanese horseshoe crab. It blocks the amidolytic activities of Limulus lipopolysaccharide-sensitive serine protease, factor C and also inhibits human alpha-thrombin, rat salivary kallikrein, bovine plasmin, and trypsin but not Limulus clotting enzyme, Limulus factor B, bovine factor Xa, human factor XIa, human tissue plasminogen activator, human urokinase, chymotrypsin, elastase, and papain. Glycosaminoglycans such as heparin and heparan sulfate had no effect on the inhibitory activity. The castor bean tick, Ixodes ricinus serpin-2 (IRS-2) whose structure has been solved, unlike that of the LICI, is found in the saliva of the tick and primarily targets 2 proinflammatory serine proteases: cathepsin G and mast cell chymase, and in higher molar excess, thrombin. It also blocks cathepsin G- and thrombin-induced platelet aggregation. Thus it has a dual role and can interfere with both inflammation and wound healing during tick feeding. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381043 [Multi-domain]  Cd Length: 372  Bit Score: 84.53  E-value: 1.19e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166   7 QRLAQQLHDGQHLKALSF---VLVEETLRLDSEFERLFHRTFQTTVEPVDLTDDIPSALA-VNSF-YQRANTEIEDFIGE 81
Cdd:cd19577   72 RQLLNLLNSTSGNYTLDIanaVLVQEGLSVLDSYKRELEEYFDAEVEEVDFANDGEKVVDeINEWvKEKTHGKIPKLLEE 151
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  82 gdvfSLPPCHKLMLFSGV----SVLTPlairFNPADTalELFQFINA*TQ--RVSTMHTTAFVRRCLHNELRCKVVDMPF 155
Cdd:cd19577  152 ----PLDPSTVLVLLNAVyfkgTWKTP----FDPKLT--RKGPFYNNGGTpkNVPMMHLRGRFPYAYDPDLNVDALELPY 221
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 240271166 156 da*SGL--SMLVLLPYDGTELRQIVNSI*PAHLAQIDERLQSCWTDLKLPKFFVREKTDPKQTLGKLGYGGVFE 227
Cdd:cd19577  222 ---KGDdiSMVILLPRSRNGLPALEQSLTSDKLDDILSQLRERKVKVTLPKFKLEYSYDLKEPLKALGLKSAFS 292
SERPIN smart00093
SERine Proteinase INhibitors;
27-272 1.74e-18

SERine Proteinase INhibitors;


Pssm-ID: 214513 [Multi-domain]  Cd Length: 359  Bit Score: 83.77  E-value: 1.74e-18
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166    27 VEETLRLDSEFERLFHRTFQTTVEPVDLTDDIPSAL-AVNSFYQRA-NTEIEDFIGEgdvfsLPPCHKLML-----FSGV 99
Cdd:smart00093  86 VDKSLKLKDSFLEDIKKLYGAEVQSVDFSDKAEEAKkQINDWVEKKtQGKIKDLLSD-----LDSDTRLVLvnaiyFKGK 160
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166   100 svltpLAIRFNPADTALELFQFINA*TQRVSTMHTTAFVRRCLH-NELRCKVVDMPFda*SGLSMLVLLPYDGtELRQIV 178
Cdd:smart00093 161 -----WKTPFDPELTREEDFHVDETTTVKVPMMSQTGRTFNYGHdEELNCQVLELPY--KGNASMLIILPDEG-GLEKLE 232
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166   179 NSI*PAHLAQIDERLQSCWTDLKLPKFFVREKTDPKQTLGKLGYGGVFEID-DLhvfhdSGRT-----RLNGFIQHCYLA 252
Cdd:smart00093 233 KALTPETLKKWMKSLTKRSVELYLPKFKIEGTYDLKDVLEKLGITDLFSNKaDL-----SGISedkdlKVSKVLHKAVLE 307
                          250       260
                   ....*....|....*....|....*..
gi 240271166   253 VSESG-------SGIPAPPDTPSEFEF 272
Cdd:smart00093 308 VNEEGteaaaatGVIAVPRSLPPEFKA 334
serpinI2_pancpin cd19576
serpin family I member 2, pancpin; Pancpin (also called proteinase inhibitor 14/PI14 or ...
24-262 6.25e-16

serpin family I member 2, pancpin; Pancpin (also called proteinase inhibitor 14/PI14 or myoepithelium-derived serine protease inhibitor/MEPI ) is an inhibitory member of the serpin superfamily. It is downregulated in pancreatic and breast cancer, and is associated with acinar cell apoptosis and pancreatic insufficiency when absent in mice. Pancpin was found to inhibit pancreatic chymotrypsin and elastase. It is thought that pancpin protects pancreatic cells from the consequences of premature activation of their respective zymogens. This subgroup belongs to clade I of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381042 [Multi-domain]  Cd Length: 371  Bit Score: 76.43  E-value: 6.25e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  24 FVLVEETLRLDSEFerlfhrtFQTTVEPVDLTDDIPSALAVNSFYQR-ANTEIEDFIGEGDvfsLPPCHKLMLFSGVSVL 102
Cdd:cd19576   96 FQVKEQYLHSNKEF-------FNSAIKLVDFQDSKASAEAISTWVERqTDGKIKNMFSSQD---FNPLTRMVLVNAIYFK 165
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 103 TPLAIRFNPADTALELFQFINA*TQRVSTMHTTAFVRRCLHNE--LRCKVVDMPFDA*SgLSMLVLLPYDGTELRQIVNS 180
Cdd:cd19576  166 GTWKQKFRKEDTHLMEFTKKDGSTVKVPMMKAQVRTKYGYFSAssLSYQVLELPYKGDE-FSLILILPAEGTDIEEVEKL 244
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 181 I*PAHLAQIDERLQSCWTDLKLPKFFVREKTDPKQTLGKLGYGGVFEID-DLHVFHDSGRTRLNGFIQHCYLAVSESGSG 259
Cdd:cd19576  245 VTAQLIKTWLSEMSEEDVEISLPRFKVEQKLDLKESLYSLNITEIFSGGcDLSGITDSSELYISQVFQKVFIEINEEGSE 324

                 ...
gi 240271166 260 IPA 262
Cdd:cd19576  325 AAA 327
serpin77Ba-like_insects cd19598
insect serpins similar to Drosophila melanogaster Serpin 77Ba; Serpins in insects function ...
19-257 2.18e-15

insect serpins similar to Drosophila melanogaster Serpin 77Ba; Serpins in insects function within development, wound healing and immunity. Drosophila melanogaster Serpin 77Ba plays an essential role in regulating the tracheal melanization immune response to bacterial and fungal infection. Insect serpins from pine beetle, diamondback moth, red flour beetle, mosquito, silkworm, and fruit fly are included in this subfamily. SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381062 [Multi-domain]  Cd Length: 376  Bit Score: 74.89  E-value: 2.18e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  19 LKALSFVLVEETLRLDSEFERLFHRTFQTTVEPVDLTDDIPSALAVNSFYQRA-NTEIEDFIGEGDVFSLppchKLMLfs 97
Cdd:cd19598   85 LESLNAIFTDKNFPVKPDFRSVVQKTYDVKVVPVDFSNSTKTANIINEYISNAtHGRIKNAVKPDDLENA----RMLL-- 158
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  98 gVSVL-------TPlairFNPADTALElfQFINA*TQ---RVSTMHTTA---FVRRclhNELRCKVVDMPFDA*SGLSML 164
Cdd:cd19598  159 -LSALyfkgkwkFP----FNKSDTKVE--PFYDENGNvigEVNMMYQKGpfpYSNI---KELKAHVLELPYGKDNRLSML 228
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 165 VLLPYDGTELRQIVNSI*PAHLAQIDERLQS-------CWTDLKLPKFFVREKTDPKQTLGKLGYGGVFeiddlhvfhDS 237
Cdd:cd19598  229 VILPYKGVKLNTVLNNLKTIGLRSIFDELERskeefsdDEVEVYLPRFKISSDLNLNEPLIDMGIRDIF---------DP 299
                        250       260       270
                 ....*....|....*....|....*....|
gi 240271166 238 GRTRLNG----------FIQHCYLAVSESG 257
Cdd:cd19598  300 SKANLPGisdyplyvssVIQKAEIEVTEEG 329
serpinF1_PEDF cd02052
serpin family F member 1, Pigment epithelium-derived factor (PEDF); Pigment epithelium-derived ...
9-272 8.29e-15

serpin family F member 1, Pigment epithelium-derived factor (PEDF); Pigment epithelium-derived factor (PEDF, also called capsin or EPC-1) is an extracellular component of the retinal interphotoreceptor matrix, vitreous humor, and aqueous humor of the adult eye. PEDF is non-inhibitory member of the serpin superfamily. It exhibits neurotrophic, neuroprotective and antiangiogenic properties and is widely expressed in the developing and adult nervous systems. This subgroup corresponds to clade F1 of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381008 [Multi-domain]  Cd Length: 373  Bit Score: 73.20  E-value: 8.29e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166   9 LAQQLHDGQHLKALSFVLVEETLRLDSEFERLFHRTFQTtvEPVDLTDDIPSALA-VNSFY-QRANTEIEDFIGEgdvfs 86
Cdd:cd02052   86 LASLTAPRKSLKSASRIYLEKKLRIKSDFLNQVEKSYGA--RPRILTGNPRLDLQeINNWVqQQTEGKIARFVKE----- 158
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  87 LPPCHKLMLFSGVSVLTPLAIRFNPADTALELFQFINA*TQRVSTMHTTAF-VRRCLHNELRCKVVDMPFda*SGLSMLV 165
Cdd:cd02052  159 LPEEVSLLLLGAAYFKGQWLTKFDPRETSLKDFHLDESRTVQVPMMSDPNYpLRYGLDSDLNCKIAQLPL--TGGVSLLF 236
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 166 LLPYDGTE-LRQIVNSI*PAHLAQIDERLQSCWTDLKLPKFFVREKTDPKQTLGKLGYGGVFEIDDLhvfhdSGRT---- 240
Cdd:cd02052  237 FLPDEVTQnLTLIEESLTSEFIHDLVRELQTVKAVLTLPKLKLSYEGELKQSLQEMRLQSLFTSPDL-----SKITskpl 311
                        250       260       270
                 ....*....|....*....|....*....|...
gi 240271166 241 RLNGFIQHCYLAVSESGSGI-PAPPDTPSEFEF 272
Cdd:cd02052  312 KLSQVQHRATLELNEEGAKTtPATGSAPRQLTF 344
serpin_miropin-like cd19588
serpin miropin and similar proteins; Miropin, the serpin from Tannerella forsythia, is thought ...
108-272 1.33e-14

serpin miropin and similar proteins; Miropin, the serpin from Tannerella forsythia, is thought to contribute to the virulence of periodontal pathogens by inhibiting neutrophil serine proteases. Miropin broadly inhibits serine endopeptidases (SEPs) including trypsin, neutrophil elastase, pancreatic elastase, subtilisin, and cathepsin G and cysteine endopeptidases (CEPs) including papain, calpain-like peptidase Tpr, and gingipain K through various reactive-site bonds. This is achieved by offering several target bonds of the RCL for cleavage within a bait region, instead of a single RSB as found in canonical serpins. In addition, promiscuous inhibition is facilitated by the capacity to insert strands deviating from the canonical length into the central sheet A, while keeping the prey peptidase bound and inactivated. The structural adaptation of miropin to provide a relaxed inhibitory specificity, which allows for formation of inhibitory complexes using different sites, is unique among serpins. SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381054 [Multi-domain]  Cd Length: 365  Bit Score: 72.52  E-value: 1.33e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 108 RFNPADTALELFQFINA*TQRVSTMHTTAFVRrCLHNELrCKVVDMPFdA*SGLSMLVLLPYDGTELRQIVNSI*PAHLA 187
Cdd:cd19588  172 PFDKENTKEEPFTLADGSTKQVPMMHQTGTFP-YLENED-FQAVRLPY-GNGRFSMTVFLPKEGKSLDDLLEQLDAENWN 248
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 188 QIDERLQSCWTDLKLPKFFVREKTDPKQTLGKLGYGGVFeiDDLHVFhDSGRTRLNGFI----QHCYLAVSESGS----- 258
Cdd:cd19588  249 EWLESFEEQEVTLKLPRFKLEYETELNDALKALGMGIAF--DPGAAD-FSIISDGPLYIsevkHKTFIEVNEEGTeaaav 325
                        170
                 ....*....|....*....
gi 240271166 259 -----GIPAPPDTPSEFEF 272
Cdd:cd19588  326 tsvgmGTTSAPPEPFEFIV 344
serpinB5_maspin cd02057
serpin family B member 5, mammary serine proteinase inhibitor; Mammary serine proteinase ...
19-264 4.92e-14

serpin family B member 5, mammary serine proteinase inhibitor; Mammary serine proteinase inhibitor (maspin, also known as proteinase inhibitor 5/PI5), a member of the serpin superfamily, is related to the ov-serpins, with a multitude of effects on cells and tissues at an assortment of developmental stages. Maspin has tumor suppressing activity against breast and prostate cancer. All true inhibitory serpins rely on an exposed reactive center loop (RCL) to inhibit their target proteinase, in which the proteinase cleaves the RCL and becomes incorporated into a serpin-proteinase complex. Maspin differs from other serpins in that its RCL is necessary for activity, but it is not cleaved or rearranged. The ovalbumin family of serpins (ov-serpins) is a family of closely related proteins, whose members can be secreted (ovalbumin), cytosolic (leukocyte elastase inhibitor, LEI), or targeted to both compartments (plasminogen activator inhibitor 2, PAI-2). It also characterized by N- and C-terminal extensions, the absence of a signal peptide, and a Ser rather than an Asn residue at the penultimate position. The ov-serpins corresponds to clade B of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants can cause blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381013 [Multi-domain]  Cd Length: 375  Bit Score: 71.03  E-value: 4.92e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  19 LKALSFVLVEETLRLDSEFERLFHRTFQTTVEPVDLTDDIPSALAV--NSFYQRANTEIEDFIGEGdvfSLPPCHKLMLF 96
Cdd:cd02057   86 LKLIKRLYVDKSLNLSTEFISSTKRPYAKELETVDFKDKLEETKGQinSSIKDLTDGHFENILAEN---SVNDQTKILVV 162
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  97 SGVSVLTPLAIRFNPADTALELFQFINA*TQRVSTMHTTAfvRRCLHN--ELRCKVVDMPFDA*SgLSMLVLLPYD---- 170
Cdd:cd02057  163 NAAYFVGKWMKKFNESETKECPFRINKTDTKPVQMMNLEA--TFSMGNidEINCKIIELPFQNKH-LSMLILLPKDvede 239
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 171 GTELRQIVNSI*PAHLAQiderlqscWTD----------LKLPKFFVREKTDPKQTLGKLGYGGVF--EIDDLHVFHDSG 238
Cdd:cd02057  240 STGLEKIEKQLNSESLAQ--------WTNpstmanakvkLSLPKFKVEKMIDPKASLESLGLKDAFneETSDFSGMSETK 311
                        250       260
                 ....*....|....*....|....*.
gi 240271166 239 RTRLNGFIQHCYLAVSESGSGIPAPP 264
Cdd:cd02057  312 GVSLSNVIHKVCLEITEDGGESIEVP 337
serpin11-like_insects cd19600
insect serpins similar to Bombyx mori Serpin-11; Serpins in insects function within ...
4-257 5.54e-14

insect serpins similar to Bombyx mori Serpin-11; Serpins in insects function within development, wound healing and immunity. The specific function of Bombyx mori serpin-11 (SPN19) is unknown. Insect serpins from sawfly, mealworm, riceborer, moth, silkworm, bollworm are included in this subfamily. SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381064 [Multi-domain]  Cd Length: 366  Bit Score: 70.77  E-value: 5.54e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166   4 EQQQRLAQQLHD---GQHLKALSFVLVEETLRLDSEFERLFHRTFQTTVEPVDLTDDIPSALAVNSFY-QRANTEIEDFI 79
Cdd:cd19600   64 EQLSRYLASLKVntsGTELENANRLFVSKKLAVKKEYEDALRRYYGTEIQKVDFGNPVNAANTINDWVrQATHGLIPSIV 143
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  80 GEGdvfSLPPCHKLML-----FSGvSVLTPlairFNPADTALELFQFINA*TQRVSTMHTTAFVRRCLHNELRCKVVDMP 154
Cdd:cd19600  144 EPG---SISPDTQLLLtnalyFKG-RWLKS----FDPKATRLRCFYVPGRGCQNVSMMELVSKYRYAYVDSLRAHAVELP 215
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 155 FdA*SGLSMLVLLPYDGTELRQIVNSI*PAHLAQIDERLQSCWTDLKLPKFFVREKTDPKQTLGKLGYGGVFEID-DLHV 233
Cdd:cd19600  216 Y-SDGRYSMLILLPNDREGLQTLSRDLPYVSLSQILDLLEETEVLLSIPKFSIEYKLDLVPALKSLGIQDLFSSNaNLTG 294
                        250       260
                 ....*....|....*....|....
gi 240271166 234 FHDSGRTRLNGFIQHCYLAVSESG 257
Cdd:cd19600  295 IFSGESARVNSILHKVKIEVDEEG 318
SERPIN COG4826
Serine protease inhibitor [Posttranslational modification, protein turnover, chaperones];
27-270 6.34e-14

Serine protease inhibitor [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443854 [Multi-domain]  Cd Length: 411  Bit Score: 71.08  E-value: 6.34e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  27 VEETLRLDSEFERLFHRTFQTTVEPVDLTDDIPSALAVNSFYQRaNTE--IEDFIGEgdvfSLPPCHKLML-----FSGv 99
Cdd:COG4826  135 AREGFTFKPDFLDTLADYYGAGVTSLDFSNDEAARDTINKWVSE-KTNgkIKDLLPP----AIDPDTRLVLtnaiyFKG- 208
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 100 svltPLAIRFNPADTALELFQFINA*TQRVSTMHTTAFVRRCLHNELrcKVVDMPFdA*SGLSMLVLLPYDGTELRQIVN 179
Cdd:COG4826  209 ----AWATPFDKSDTEDAPFTLADGSTVQVPMMHQTGTFPYAEGDGF--QAVELPY-GGGELSMVVILPKEGGSLEDFEA 281
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 180 SI*PAHLAQIDERLQSCWTDLKLPKFFVREKTDPKQTLGKLGYGGVFEID-DLHVFHDSGRTRLNGFIQHCYLAVSESGS 258
Cdd:COG4826  282 SLTAENLAEILSSLSSQEVDLSLPKFKFEYEFELKDALKALGMPDAFTDAaDFSGMTDGENLYISDVIHKAFIEVDEEGT 361
                        250       260
                 ....*....|....*....|..
gi 240271166 259 ----------GIPAPPDTPSEF 270
Cdd:COG4826  362 eaaaatavgmELTSAPPEPVEF 383
serpinB3_B4_SCCA1_2 cd19563
serpin family B members 3 and 4, squamous cell carcinoma antigens 1 and 2; Squamous cell ...
4-270 8.63e-14

serpin family B members 3 and 4, squamous cell carcinoma antigens 1 and 2; Squamous cell carcinoma antigen 1 (SCCA1, also called HsT1196 or protein T4-A) and squamous cell carcinoma antigen 2 (SCCA2, also called PI11 or leupin), which are encoded by the SERPINB3 and SERPINB4 genes, respectively, are members of the serpin family of serine protease inhibitors. SCCA1 is a so called cross-class serpin, inhibiting cysteine proteinases such as cathepsin S, K, L, and papain. SCCA2 inhibits chymotrypsin-like serine proteases including chymase, cathepsin G, and Der p1. Elevated levels of SCCA1 and SCCA2 have been detected in chronic inflammatory conditions involving the skin, especially atopic dermatitis (AD)and psoriasis, as well as in respiratory inflammatory diseases such as asthma, chronic obstructive pulmonary disease (COPD), and tuberculosis. They are both normally co-expressed in squamous epithelial cells of tongue, esophagus, tonsils, epidermal hair follicles, lung and uterus, and become highly up-regulated in squamous carcinomas of these organs. Diseases associated with SERPINB3 include anal cancer and cervical squamous cell carcinoma, whereas SERPINB4 include squamous cell carcinoma and chromosome 18Q deletion syndrome. The ovalbumin family of serpins (ov-serpins) is a family of closely related proteins, whose members can be secreted (ovalbumin), cytosolic (leukocyte elastase inhibitor, LEI), or targeted to both compartments (plasminogen activator inhibitor 2, PAI-2). It also characterized by N- and C-terminal extensions, the absence of a signal peptide, and a Ser rather than an Asn residue at the penultimate position. The ov-serpins corresponds to clade B of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants can cause blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381030 [Multi-domain]  Cd Length: 390  Bit Score: 70.45  E-value: 8.63e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166   4 EQQQRLAQQLH---DGQHLKALSFVLVEETLRLDSEFERLFHRTFQTTVEPVDLTDDI-PSALAVNSFYQR-ANTEIEDF 78
Cdd:cd19563   83 HQFQKLLTEFNkstDAYELKIANKLFGEKTYLFLQEYLDAIKKFYQTSVESVDFANAPeESRKKINSWVESqTNEKIKNL 162
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  79 IGEGDVFSlppCHKLMLFSGVSVLTPLAIRFNPADTALELFqFINA*TQRVSTM--HTTAFVRRCLHNeLRCKVVDMPFD 156
Cdd:cd19563  163 IPEGNIGS---NTTLVLVNAIYFKGQWEKKFNKEDTKEEKF-WPNKNTYKSIQMmrQYTSFHFASLED-VQAKVLEIPYK 237
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 157 A*SgLSMLVLLPYDGTELRQIVNSI*PAHLAQID--ERLQSCWTDLKLPKFFVREKTDPKQTLGKLGYGGVFEID-DLHV 233
Cdd:cd19563  238 GKD-LSMIVLLPNEIDGLQKLEEKLTAEKLMEWTslQNMRETRVDLHLPRFKVEESYDLKDTLRTMGMVDIFNGDaDLSG 316
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 240271166 234 FHDSGRTRLNGFIQHCYLAVSESGSGIPA----------PPDTPSEF 270
Cdd:cd19563  317 MTGSRGLVLSGVLHKAFVEVTEEGAEAAAatavvgfgssPTSTNEEF 363
serpin_crustaceans_chelicerates_insects cd19594
serpin family proteins from crustaceans, chelicerates, and insects; This group includes a ...
27-258 2.74e-13

serpin family proteins from crustaceans, chelicerates, and insects; This group includes a variety of serpins from crustaceans (sea louse, Chinese mitten crab, signal crayfish, red king crab, Asian tiger shrimp), chelicerates (Atlantic horseshoe crab, common house spider), and insects (Asian tiger mosquito, caddisfly, pea aphid, bed bug, fruit fly, Australian sheep blowfly, tobacco hornworm, alfalfa leafcutting bee). SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381059 [Multi-domain]  Cd Length: 374  Bit Score: 68.74  E-value: 2.74e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  27 VEETLRLDSEFERLFHrtfqTTVEPVDLTDDiP--SALAVNSFYQRA-NTEIEDFIGEGdvfSLPPCHKLML-----FSG 98
Cdd:cd19594   97 FSKTLKLRECMLDLFK----DELEKVDFRSD-PeeARKEINDWVSNQtKGHIKDLLPPG---SITEDTKLVLanaayFKG 168
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  99 VsvltpLAIRFNPADTALELFqFINA*TQR-VSTMHTTAFVRRCLHNELRCKVVDMPFDA*SgLSMLVLLPYD-GTELRQ 176
Cdd:cd19594  169 L-----WLSQFDPENTKKEPF-YTSPSEQTfVDMMKQKGTFNYGVSEELGAHVLELPYKGDD-ISMFILLPPFsGNGLDN 241
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 177 IVNSI*PAHLAQIDERLQSCWTDLKLPKFFVREKTDPKQTLGKLGYGGVFE--IDDLHVFHDSGRTRLNGFIQHCYLAVS 254
Cdd:cd19594  242 LLSRLNPNTLQNALEEMYPREVEVSLPKFKLEQELELVPALQKMGVGDLFDpsAADLSLFSDEPGLHLDDAIHKAKIEVD 321

                 ....
gi 240271166 255 ESGS 258
Cdd:cd19594  322 EEGT 325
serpinE1_PAI-1 cd02051
serpin family E member 1, plasminogen activator inhibitor-1; Plasminogen activator inhibitor-1 ...
25-228 7.85e-13

serpin family E member 1, plasminogen activator inhibitor-1; Plasminogen activator inhibitor-1 (PAI-1/PLANH1, also called endothelial PAI) is the primary, fast-acting inhibitor of plasminogen activators. It is often bound to vitronectin, an abundant component of the extracellular matrix in many tissues. PAI1 deficiency is a rare bleeding disorder that causes excessive or prolonged bleeding due to blood clots being broken down too early. PAI-1 is a member of the serpin superfamily and belongs to clade E. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381007 [Multi-domain]  Cd Length: 374  Bit Score: 67.46  E-value: 7.85e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  25 VLVEETLRLDSEFERLFHRTFQTTVEPVDLTDDIPSALAVNSFYQrANTE--IEDFIGEGdvfSLPPCHKLMLFSGVSVL 102
Cdd:cd02051   92 VFVQRDLKLVKGFMPHFFRAFRSTVKQVDFSEPERARFIINDWVK-DHTKgmISDFLGSG---ALDQLTRLVLLNALHFN 167
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 103 TPLAIRFNPADTALELFQFINA*TQRVSTMHTTAfvrRCLHNELRCK------VVDMPFDA*SgLSMLVLLPYD-GTELR 175
Cdd:cd02051  168 GLWKTPFPEKSTHERLFHKSDGSTVSVPMMAQTN---KFNYGEFTTPdgvdydVIELPYEGET-LSMLIAAPFEkEVPLS 243
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 240271166 176 QIVNSI*PAHLAQIDERLQSCWTDLKLPKFFVREKTDPKQTLGKLGYGGVFEI 228
Cdd:cd02051  244 ALTNILSAQLISQWKQNMRRVTRLLVLPKFSLESEVDLKKPLENLGMTDMFRQ 296
serpinA cd19957
serpin family A; The clade A of the serpin superfamily includes the classical serine ...
7-255 9.21e-13

serpin family A; The clade A of the serpin superfamily includes the classical serine proteinase inhibitors, alpha-1-antitrypsin and alpha-1-antichymotrypsin, protein C inhibitor, kallistatin, and non-inhibitory serpins, like corticosteroid and thyroxin binding globulins. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381073 [Multi-domain]  Cd Length: 363  Bit Score: 67.24  E-value: 9.21e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166   7 QRLAQQLH---DGQHLKALSFVLVEETLRLDSEFERLFHRTFQTTVEPVDLTDDIPSALAVNSFY-QRANTEIEDFIGEg 82
Cdd:cd19957   69 QHLLQTLNqpkKELQLKIGNALFVDKQLKLLKKFLEDAKKLYNAEVFPTNFSDPEEAKKQINDYVkKKTHGKIVDLVKD- 147
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  83 dvfsLPPCHKLML-----FSGvSVLTPlairFNPADTALELFQFINA*TQRVSTMHTTAFVRRCLHNELRCKVVDMPF-- 155
Cdd:cd19957  148 ----LDPDTVMVLvnyifFKG-KWKKP----FDPEHTREEDFFVDDNTTVKVPMMSQKGQYAYLYDRELSCTVLQLPYkg 218
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 156 DA*sglSMLVLLPYDGtELRQIVNSI*PAHLAQIDERLQSCWTDLKLPKFFVREKTDPKQTLGKLGYGGVFeiddlhvfh 235
Cdd:cd19957  219 NA----SMLFILPDEG-KMEQVEEALSPETLERWNRSLRKSQVELYLPKFSISGSYKLEDILPQMGISDLF--------- 284
                        250       260
                 ....*....|....*....|
gi 240271166 236 dSGRTRLNGFIQHCYLAVSE 255
Cdd:cd19957  285 -TNQADLSGISEQSNLKVSK 303
serpin_thermopin-like cd19590
serpin thermopin and similar proteins; Thermopin, the serpin from Thermobifida fusca, ...
27-221 1.81e-12

serpin thermopin and similar proteins; Thermopin, the serpin from Thermobifida fusca, functions as an irreversible proteinase inhibitor with resistance to polymerization at high temperatures. The crystal structure of the cleaved thermopin was found to adopt the canonical serpin fold, supporting its inclusion as a classical inhibitory member of the serpin superfamily. A detailed structural comparison revealed unique features, including charge-stabilizing interactions, a deleted element of secondary structure (the G helix), and a C-terminal "tail" that interacts with the top of the A beta sheet and plays an important role in the folding/unfolding of the molecule. These unique features provide structural and biophysical evidence as to how this unusual serpin member has adapted to remain functional in an extreme environment. SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381056 [Multi-domain]  Cd Length: 366  Bit Score: 66.38  E-value: 1.81e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  27 VEETLRLDSEFERLFHRTFQTTVEPVDL-TDDIPSALAVNSF-YQRANTEIEDFIGEGDVFSLPpchklmlfsgVSVLTP 104
Cdd:cd19590   90 GQKGYPFLPEFLDTLAEYYGAGVRTVDFaGDPEGARKTINAWvAEQTNGKIKDLLPPGSIDPDT----------RLVLTN 159
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 105 lAI--------RFNPADTALELFQFINA*TQRVSTMHTTAFVRRCLHNELrcKVVDMPFdA*SGLSMLVLLPYDGTELrQ 176
Cdd:cd19590  160 -AIyfkaawatPFDPEATKDAPFTLLDGSTVTVPMMHQTGRFRYAEGDGW--QAVELPY-AGGELSMLVLLPDEGDGL-A 234
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 240271166 177 IVNSI*PAHLAQIDERLQSCWTDLKLPKFFVREKTDPKQTLGKLG 221
Cdd:cd19590  235 LEASLDAEKLAEWLAALREREVDLSLPKFKFESSFDLKETLKALG 279
serpinB13_headpin cd19572
serpin family B member 13, headpin; Headpin (also known as hurpin or proteinase inhibitor 13 ...
38-258 4.10e-11

serpin family B member 13, headpin; Headpin (also known as hurpin or proteinase inhibitor 13/P113) maps to chromosome 18q21.3 and is expressed in normal squamous epithelium of the oral mucosa, skin, and cervix. Inhibitory serpins are known to play an important role in tumor invasion, metastasis, tumor suppression and apoptosis. Headpin belongs to the ovalbumin family of serpins (ov-serpins), a family of closely related proteins, whose members can be secreted (ovalbumin), cytosolic (leukocyte elastase inhibitor, LEI), or targeted to both compartments (plasminogen activator inhibitor 2, PAI-2). It also characterized by N- and C-terminal extensions, the absence of a signal peptide, and a Ser rather than an Asn residue at the penultimate position. The ov-serpins corresponds to clade B of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants can cause blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381038 [Multi-domain]  Cd Length: 391  Bit Score: 62.43  E-value: 4.10e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  38 ERLFHrtfqTTVEPVDL---TDDipSALAVNSFYQR-ANTEIEDFIGEGdvfSLPPCHKLMLFSGVSVLTPLAIRFNPAD 113
Cdd:cd19572  125 EKYYH----ASLEPVDFvnaADE--SRKKINSWVESqTNEKIKDLFPDG---SLSSSTKLVLVNTVYFKGQWDREFKKEN 195
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 114 TALELFqFINA*TQRVSTM----HTTAFVRRclhNELRCKVVDMPFDa*SGLSMLVLLPYDGTELRQIVNSI*PAHL--- 186
Cdd:cd19572  196 TKEEEF-WLNKSTSKSVLMmtqcHSFSFTFL---EDLQAKILGIPYK-NNDLSMFVLLPNDIDGLEKIIDKISPEKLvew 270
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 240271166 187 ---AQIDERLqscwTDLKLPKFFVREKTDPKQTLGKLGYGGVFEIDDLHVFHDSGRTRLNG--FIQHCYLAVSESGS 258
Cdd:cd19572  271 tspGHMEERN----VSLHLPRFEVEDSYDLEDVLAALGLGDAFSECQADYSGMSARSGLHAqkFLHRSFVVVTEEGT 343
serpin1K-like cd19579
Manduca sexta Serpin 1K and similar proteins; Serpin 1K is a chymotrypsin inhibitor and is 1 ...
19-258 1.91e-09

Manduca sexta Serpin 1K and similar proteins; Serpin 1K is a chymotrypsin inhibitor and is 1 of 12 serpins found in the hemolymph of the hornworm moth Manduca sexta. Serpins may be involved in the immune response in insect hemolymph. All of these serpins are encoded by the same gene, and the message for each is produced by alternative splicing of the final exon. This exon encodes the RCL and two strands of sheet B. Serpin 1K has a canonical structure at the reactive center, as is observed in a1-antitrypsin, whereas hinge residues (P17-P13) adopt the position and conformation observed in ovalbumin. SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381045 [Multi-domain]  Cd Length: 368  Bit Score: 57.25  E-value: 1.91e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  19 LKALSFVLVEETLRLDSEFERLFHRTFQTTVEPVDLTDDIPSALAVNSFY-QRANTEIEDFIGEGDvfsLPPCHKLMLFS 97
Cdd:cd19579   84 LDLANKIYVSDGYELSDDFKKDSKDVFDSEVENIDFSKPQEAAKIINDWVeEQTNGRIKNLVSPDM---LSEDTRLVLVN 160
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  98 GV----SVLTPlairFNPADTALELFQFINA*TQRVSTMHTTAFVRRCLHNELRCKVVDMPFdA*SGLSMLVLLPYDGTE 173
Cdd:cd19579  161 AIyfkgNWKTP----FNPNDTKDKDFHVSKDKTVKVPMMYQKGSFKYAESPELDAKLLELPY-KGDNASMVIVLPNEVDG 235
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 174 LRQIVNSI*-PAHLAQIDERLQSCWTDLKLPKFFVREKTDPKQTLGKLGYGGVFeiddlhvfhDSGRTRLNGF------- 245
Cdd:cd19579  236 LPALLEKLKdPKLLNSALDKLSPTEVEVYLPKFKIESEIDLKDILKKLGVTKIF---------DPDASGLSGIlvknesl 306
                        250
                 ....*....|....*...
gi 240271166 246 -----IQHCYLAVSESGS 258
Cdd:cd19579  307 yvsaaIQKAFIEVNEEGT 324
serpinA10_PZI cd02055
serpin family A member 10, protein Z-dependent protease inhibitor; Protein Z-dependent ...
4-270 2.16e-09

serpin family A member 10, protein Z-dependent protease inhibitor; Protein Z-dependent protease inhibitor (ZPI) is a member of the serpin superfamily of proteinase inhibitors (clade A10). ZPI inhibits coagulation factor Xa, dependent on protein Z (PZ), a vitamin K-dependent plasma protein. ZPI also inhibits factor XIa in a process that does not require PZ. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381011 [Multi-domain]  Cd Length: 380  Bit Score: 57.26  E-value: 2.16e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166   4 EQQQRLAQQLH---------DGQHLKALSFVLVEETLRLDSEFERLFHRTFQTTVEPVDLTDDIPSALAVNS-FYQRANT 73
Cdd:cd02055   74 LDPDLLPDLFQqlrenitqnGELSLDQGSALFIHQDFEVKETFLNLSKKYFGAEVQSVDFSNTSQAKDTINQyIRKKTGG 153
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  74 EIEDFIGEGDvfslpPCHKLMLFSGVSV----LTPlairFNPADTALELFQFINA*TQRVSTMHTTAFVRRCLHNELRCK 149
Cdd:cd02055  154 KIPDLVDEID-----PQTKLMLVDYIFFkgkwLLP----FNPSFTEDERFYVDKYHIVQVPMMFRADKFALAYDKSLKCG 224
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 150 VVDMPFda*SGLSMLVLLPYDGTELRQIVNSI*PahlaqidERLQScW--------TDLKLPKFFVREKTDPKQTLGKLG 221
Cdd:cd02055  225 VLKLPY--RGGAAMLVVLPDEDVDYTALEDELTA-------ELIEG-WlrqlkktkLEVQLPKFKLEQSYSLHELLPQLG 294
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 240271166 222 YGGVFEID-DLHVFHDSGRTRLNGFIQHCYLAVSESGSGipAPPDTPSEF 270
Cdd:cd02055  295 ITQVFQDSaDLSGLSGERGLKVSEVLHKAVIEVDERGTE--AAAATGSEI 342
serpinB cd19956
serpin B family, ov-serpins; The clade B of the serpin superfamily corresponds to the ...
28-258 3.41e-09

serpin B family, ov-serpins; The clade B of the serpin superfamily corresponds to the ovalbumin family of serpins (ov-serpins), a family of closely related proteins, whose members can be secreted (ovalbumin), cytosolic (leukocyte elastase inhibitor, LEI), or targeted to both compartments (plasminogen activator inhibitor 2, PAI-2). Family members are also characterized by N- and C-terminal extensions, the absence of a signal peptide, and a Ser rather than an Asn residue at the penultimate position. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants can cause blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381072 [Multi-domain]  Cd Length: 376  Bit Score: 56.80  E-value: 3.41e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  28 EETLRLDSEFERLFHRTFQTTVEPVDLTDDIPSA-LAVNSF-YQRANTEIEDFIGEGdvfSLPPCHKLMLFSGVSVLTPL 105
Cdd:cd19956   99 EKTYPFLQQYLDCTKKLYQAELETVDFKNAPEEArKQINSWvESQTEGKIKNLLPPG---SIDSSTKLVLVNAIYFKGKW 175
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 106 AIRFNPADTALELFQFINA*TQRVSTMHT-----TAFVRrclhnELRCKVVDMPFdA*SGLSMLVLLPYDGTELRQIVNS 180
Cdd:cd19956  176 EKQFDKENTKEMPFRLNKNESKPVQMMYQkgkfkLGYIE-----ELNAQVLELPY-AGKELSMIILLPDDIEDLSKLEKE 249
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 181 I*PahlaqidERLQScWT----------DLKLPKFFVREKTDPKQTLGKLGYGGVFE--IDDLhvfhdSGRTRLNG---- 244
Cdd:cd19956  250 LTY-------EKLTE-WTspenmketevEVYLPRFKLEESYDLKSVLESLGMTDAFDegKADF-----SGMSSAGDlvls 316
                        250
                 ....*....|....*
gi 240271166 245 -FIQHCYLAVSESGS 258
Cdd:cd19956  317 kVVHKSFVEVNEEGT 331
serpin48-like_insects cd19955
insect serpins similar to Tenebrio molitor serpin 48; Serpins in insects function within ...
27-272 9.74e-09

insect serpins similar to Tenebrio molitor serpin 48; Serpins in insects function within development, wound healing and immunity. Tenebrio molitor serpin 48 (SPN48) is highly specific for Spatzle-processing enzyme, an essential component in insect innate immunity. SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381071 [Multi-domain]  Cd Length: 361  Bit Score: 55.36  E-value: 9.74e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  27 VEETLRLDSEFERLFHRTFQTTVEPVDLTDDIPSALAVNS-FYQRANTEIEDFIGEGDVFSLPpchKLML-----FSGVs 100
Cdd:cd19955   87 VKDKFKINPDFKKIAKDIYQADAENIDFTNKTEAAEKINKwVEEQTNNKIKNLISPEALNDRT---RLVLvnalyFKGK- 162
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 101 vltpLAIRFNPADTALELFQFINA*TQRVSTMHTTAFVRRCLHN-ELRCKVVDMPFDA*SGLSMLVLLPY--DG-TELRQ 176
Cdd:cd19955  163 ----WASPFPSYSTRKKNFYKTGKDQVEVDTMHLSEQYFNYYESkELNAKFLELPFEG-QDASMVIVLPNekDGlAQLEA 237
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 177 IVNSI*pahLAQIDERLQScwTDLKLPKFFVREKTDPKQTLGKLGYGGVF--EIDDLHVFH-DSGRTRLNGFIQHCYLAV 253
Cdd:cd19955  238 QIDQV----LRPHNFTPER--VNVSLPKFRIESTIDFKEILQKLGVKKAFndEEADLSGIAgKKGDLYISKVVQKTFINV 311
                        250       260
                 ....*....|....*....|....*....
gi 240271166 254 SESGS----------GIPAPPDTPSEFEF 272
Cdd:cd19955  312 TEDGVeaaaatavlvALPSSGPPSSPKEF 340
serpinK_insect_SRPN2-like cd19578
serpin family K, insect Serpin-2 and similar proteins; Serpin-2 (SRPN2) is a negative ...
47-221 1.24e-08

serpin family K, insect Serpin-2 and similar proteins; Serpin-2 (SRPN2) is a negative regulator of the melanization response in the malaria vector Anopheles gambiae. SRPN2 irreversibly inhibits clip domain serine proteinase 9 (CLIPB9), which functions in a serine proteinase cascade ending in the activation of prophenoloxidase and melanization. Silencing of SRPN2 results in spontaneous melanization and decreased life span of the mosquito and is a promising target for vector control. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381044 [Multi-domain]  Cd Length: 376  Bit Score: 54.90  E-value: 1.24e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  47 TTVEPVDLTDDIPSALAVNSFYQRA-NTEIEDFIGEGDVFSlppchKLML------FSGVSVltplaIRFNPADTALELF 119
Cdd:cd19578  116 TDIENVNFSDPTAAAATINSWVSEItNGRIKDLVTEDDVED-----SVMLlanaiyFKGLWR-----HQFPENETKTGPF 185
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 120 QFINA*TQRVSTMHTTA---FVRrclHNELRCKVVDMPFdA*SGLSMLVLLPYDGTELRQIVNSI*PAHLAQIDERLQSC 196
Cdd:cd19578  186 YVTPGTTVTVPFMEQTGqfyYAE---SPELDAKILRLPY-KGNKFSMYIILPNAKNGLDQLLKRINPDLLHRALWLMEET 261
                        170       180
                 ....*....|....*....|....*
gi 240271166 197 WTDLKLPKFFVREKTDPKQTLGKLG 221
Cdd:cd19578  262 EVDVTLPKFKFDFTTSLKEVLQELG 286
serpinA12_vaspin cd19558
serpin family A member 12, visceral adipose tissue-derived serpin; Vaspin, also called ...
25-227 8.13e-08

serpin family A member 12, visceral adipose tissue-derived serpin; Vaspin, also called visceral adipose tissue-derived serpin or serpinA12, was identified as an adipokine with insulin-sensitizing effects and has been shown to significantly reduce blood glucose concentrations in various mouse models. As such, vaspin may represent a novel treatment tool for diabetes intervention strategies. Human kallikrein 7 (hK7), which cleaves human insulin within A and B chain, was the first protease target of vaspin inhibited by classical serpin mechanism with high specificity in vitro. This family belongs to the clade A of the serpin superfamily, which includes the classical serine proteinase inhibitors, alpha-1-antitrypsin and alpha-1-antichymotrypsin, protein C inhibitor, kallistatin, and non-inhibitory serpins, like corticosteroid and thyroxin binding globulins. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381026 [Multi-domain]  Cd Length: 372  Bit Score: 52.47  E-value: 8.13e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  25 VLVEETLRLDSEFERLFHRTFQTTVEPVDLTDDIPSALAVNSFY-QRANTEIEDFIGegdvfSLPPCHKLMLFSGVSVLT 103
Cdd:cd19558   99 LFIDQRLRPQQKFLEDAKNFYSADTILTNFQDLEMAQKQINDYIsQKTHGKINNLVK-----NIDPGTVMLLANYIFFQA 173
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 104 PLAIRFNPADTALELFQFINA*TQRVSTMHTTAFVRRCLHNELRCKVVDMPFDA*sGLSMLVLLPyDGTELRQIVNSI*P 183
Cdd:cd19558  174 RWKHEFDPKQTKEEDFFLEKNKSVKVPMMFRRGIYQVGYDDQLSCTILEIPYKG--NITATFILP-DEGKLKHLEKGLQK 250
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....
gi 240271166 184 AHLAQIDERLQSCWTDLKLPKFFVREKTDPKQTLGKLGYGGVFE 227
Cdd:cd19558  251 DTFARWKTLLSRRVVDVSVPKLHISGTYDLKKTLSYLGVSKIFE 294
serpinM_ShSPI cd19582
serpin family M, Schistosoma haematobium serpin; ShSPI is a serpin from the trematode ...
25-255 2.78e-07

serpin family M, Schistosoma haematobium serpin; ShSPI is a serpin from the trematode Schistosoma haematobium. The protein is exposed on the surface of invading cercaria as well as of adult worms, suggesting its involvement in the parasite-host interaction. It has several distinctive features, mostly concerning the helical subdomain of the protein. It is proposed that these peculiarities are related to the unique biological properties of a small serpin subfamily which is conserved among pathogenic schistosomes. SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381048 [Multi-domain]  Cd Length: 388  Bit Score: 50.84  E-value: 2.78e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  25 VLVEETLRLDSEFERLFHRTFQTTVEPVDLTDDIPSALAVNSFY-QRANTEIEDFIGEGDvfSLPPCHKLMLFSGVSVLT 103
Cdd:cd19582  105 VFLKKGYKVEPEFNESIANFFEDKVKQVDFTNQSEAFEDINEWVnSKTNGLIPQFFKSKD--ELPPDTLLVLLNVFYFKD 182
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 104 PLAIRFNPADTALELFQFINA*TQRVSTMHTTAFVRRCLHNELRCKVVDMPFDA*SgLSMLVLLPYDGTELRQIVN---- 179
Cdd:cd19582  183 VWKKPFMPEYTTKEDFYLSKGRSIQVPMMHIEEQLVYGKFPLDGFEMVSKPFKNTR-FSFVIVLPTEKFNLNGIENvleg 261
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 240271166 180 SI*PAHLAQIDERLQscwTDLKLPKFFVREKTDPKQTLGKLGyggvfeIDDLhvfHDSGRTRLNGFIQHCYLAVSE 255
Cdd:cd19582  262 NDFLWHYVQKLESTQ---VSLKLPKFKLESTLDLIEILKSMG------IRDL---FDPIKADLTGITSHPNLYVNE 325
serpinB1_LEI cd19560
serpin family B member 1 (serpin B1), leukocyte elastase inhibitor (LEI); Leukocyte elastase ...
73-255 3.51e-07

serpin family B member 1 (serpin B1), leukocyte elastase inhibitor (LEI); Leukocyte elastase inhibitor (LEI , also known as proteinase inhibitor 2/PI2, monocyte neutrophil elastase inhibitor/MNEI, EI, or ELANH2) is a member of the clade B serpins or ov-serpins (ovalbumin related serpins) that in humans is encoded by the SERPINB1 gene. Human SERPINB1 is a potent intracellular inhibitor for granzyme H (GzmH) which is constitutively expressed in NK cells and induces target cell death. GzmH cleaves SERPINB1 at Phe343 in the RCL to mediate suicide inhibition. Equine leukocyte elastase inhibitor (HLEI) in contrast to other serpins contains no carbohydrate and has a blocked amino terminus. HLEI is a thymosin beta4-binding protein suggesting a physiological role for cytoplasmic elastase inhibitors in the thymosin B4-regulated rearrangement of the cytoskeleton of leukocytes. HLEI has been proposed to be involved with the control of intracellular protein turnover or the control of elastinolytic activity during inflammation. Ov-serpins are a family of closely related proteins, whose members can be secreted (ovalbumin), cytosolic (leukocyte elastase inhibitor, LEI), or targeted to both compartments (plasminogen activator inhibitor 2, PAI-2). It also characterized by N- and C-terminal extensions, the absence of a signal peptide, and a Ser rather than an Asn residue at the penultimate position. The ov-serpins corresponds to clade B of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants can cause blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381028 [Multi-domain]  Cd Length: 379  Bit Score: 50.82  E-value: 3.51e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  73 TE--IEDFIGEGDVFSLPpchKLMLFSGVSVLTPLAIRFNPADTALELFQFINA*TQRVSTMHTTAFVRRCLHNELRCKV 150
Cdd:cd19560  140 TEgkIPELLASGVVDSMT---KLVLVNAIYFKGSWAEKFMAEATKDAPFRLNKKETKTVKMMYQKKKFPFGYIPELKCRV 216
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 151 VDMPFDA*SgLSMLVLLPYD----GTELRQIVNSI---------*PAHLAQIDERlqscwtdLKLPKFFVREKTDPKQTL 217
Cdd:cd19560  217 LELPYVGKE-LSMVILLPDDiedeSTGLKKLEKQLtleklhewtKPENLMNIDVH-------VHLPRFKLEESYDLKSHL 288
                        170       180       190
                 ....*....|....*....|....*....|....*...
gi 240271166 218 GKLGYGGVFeiddlhvfhDSGRTRLNGFIQHCYLAVSE 255
Cdd:cd19560  289 ARLGMQDLF---------DSGKADLSGMSGARDLFVSK 317
serpin_mollusks cd19602
serpin family proteins from mollusks; This group includes a variety of serpins from mollusks ...
106-226 6.45e-07

serpin family proteins from mollusks; This group includes a variety of serpins from mollusks (freshwater snail, sea slug, and disk abalone). SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381066 [Multi-domain]  Cd Length: 374  Bit Score: 49.64  E-value: 6.45e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 106 AIRFNPADTALELFQFINA*TQRVSTMHTTAFVRRCLHNELRCKVVDMPFDA*SgLSMLVLLPYDGTELRQIVNSI-*PA 184
Cdd:cd19602  171 KTPFDRFETKKQDFTQSNSAVKTVDMMHDTGRYRYKRDPALGADVVELPFKGDR-FSMYIALPHAVSSLADLENLLaSPD 249
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 240271166 185 HLAQIDERLQSCWTDLKLPKFFVREKTDPKQTLGKLGYGGVF 226
Cdd:cd19602  250 KAETLLTGLETRRVKLKLPKFKIETSLSLKKALQELGMGKAF 291
serpinG1_C1-INH cd02050
serpin family G member 1, plasma proteinase C1 inhibitor; Plasma proteinase C1 inhibitor ...
86-231 8.34e-07

serpin family G member 1, plasma proteinase C1 inhibitor; Plasma proteinase C1 inhibitor (C1-INH/C1IN) is a protease inhibitor of the serpin family. It plays a pivotal role in regulating the activation of the classical complement pathway and of the contact system, via regulating bradykinin formation, inhibiting factor XII and kallikrein of the contact system, and via acting on factor XI in the coagulation cascade. This subgroup corresponds to clade G of the serpin superfamily. SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381006 [Multi-domain]  Cd Length: 362  Bit Score: 49.29  E-value: 8.34e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  86 SLPPCHKLMLFSGVSVLTPLAIRFNPADTALELFQFINA*TQRVSTMHTTAF-VRRCLHNELRCKVvdMPFDA*SGLSML 164
Cdd:cd02050  145 SLPSDTQLVLLNAVYFNGKWKTTFDPKKTKLEPFYKKNGDSIKVPMMYSKKYpVAHFYDPNLKAKV--GRLQLSHNLSLV 222
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 240271166 165 VLLP-YDGTELRQIVNSI*PAHLAQIDERLQSCW---TDLKLPKFFVREKTDPKQTLGKLGYGGVFEIDDL 231
Cdd:cd02050  223 ILLPqSLKHDLQDVEQKLTDSVFKAMMEKLEGSKpqpTEVTLPKIKLDSSQDMLSILEKLGLFDLFYDANL 293
serpin_tengpin-like cd19589
serpin tengpin and similar proteins; Tengpin is an unusual prokaryotic serpin from the ...
109-230 1.62e-06

serpin tengpin and similar proteins; Tengpin is an unusual prokaryotic serpin from the extremophile Thermoanaerobacter tengcongensis. In addition to the serpin domain, tengpin contains an N-terminal region that functions to trap the serpin domain in the native metastable state and prevent the spontaneous transition to the latent conformation. SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381055 [Multi-domain]  Cd Length: 367  Bit Score: 48.71  E-value: 1.62e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 109 FNPADTALELFQFINA*TQRVSTMHTTaFVRRCLHNElRCKVVDMPFdA*SGLSMLVLLPYDGTELRQIVNSI*PAHLAQ 188
Cdd:cd19589  168 FEKENTKEGTFTNADGTEVEVDMMNST-ESFSYLEDD-GATGFILPY-KGGRYSFVALLPDEGVSVSDYLASLTGEKLLK 244
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 240271166 189 IDERLQSCWTDLKLPKFFVREKTDPKQTLGKLGYGGVFEIDD 230
Cdd:cd19589  245 LLDSAESTKVNLSLPKFKYEYSLELNDALKAMGMEDAFDPGK 286
serpin_bacteria_crustaceans cd19593
serpin family proteins from bacteria and crustaceans; This group includes a variety of serpin ...
108-226 8.90e-06

serpin family proteins from bacteria and crustaceans; This group includes a variety of serpin family proteins from various bacteria and crustaceans including sea louse and salmon louse. SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381058 [Multi-domain]  Cd Length: 370  Bit Score: 46.19  E-value: 8.90e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 108 RFNPADTALELFQFINA*TQRVSTMHTTAfvRRCLHNELRCKVVDMPFdA*SGLSMLVLLPYDGTELRQIVNSI*PAHLA 187
Cdd:cd19593  169 KFDPSLTHDAPFHVSPDKQVQVPTMFAPI--EFASLEDLKFTIVALPY-KGERLSMYILLPDERFGLPELEAKLTSDTLD 245
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 240271166 188 QID---ERLQSCWTDLKLPKFFVREKTDPKQTLGKLGYGGVF 226
Cdd:cd19593  246 PLLlelDAAQSQKVELYLPKFKLETGHDLKEPFQSLGIKDAF 287
serpinA_A1AT-like cd19549
serpin family A member, alpha-1-antitrypsin and similar proteins; This group contains proteins ...
7-258 1.12e-05

serpin family A member, alpha-1-antitrypsin and similar proteins; This group contains proteins similar to alpha-1-antitrypsin (also called A1AT, A1A, AAT, alpha1-proteinase inhibitor/A1PI, alpha1-antiproteinase/A1AP, and serum trypsin inhibitor), a protease inhibitor that belongs to the serpin superfamily. It is encoded in humans by the SERPINA1 gene. When the blood contains inadequate amounts of A1AT or functionally defective A1AT (such as in alpha-1 antitrypsin deficiency), neutrophil elastase is excessively free to break down elastin, degrading the elasticity of the lungs, which results in respiratory complications, such as chronic obstructive pulmonary disease. Normally, A1AT leaves its site of origin, the liver, and joins the systemic circulation; defective A1AT can fail to do so, building up in the liver, which results in cirrhosis. This group belongs to the clade A of the serpin superfamily, which includes the classical serine proteinase inhibitors, alpha-1-antitrypsin and alpha-1-antichymotrypsin, protein C inhibitor, kallistatin, and non-inhibitory serpins, like corticosteroid and thyroxin binding globulins. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381017 [Multi-domain]  Cd Length: 367  Bit Score: 45.84  E-value: 1.12e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166   7 QRLAQQlhDGQHLKALSFVLVEETLRLDSEFERLFHRTFQTTVEPVDLTDDIPSALAVNSFYQR-ANTEIEDFIGEgdvf 85
Cdd:cd19549   75 HMLGHS--EELDLSAGNAVFIDDTFKPNPEFLKDLKHYYLSEGFTVDFTKTTEAADTINKYVAKkTHGKIDKLVKD---- 148
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  86 sLPPCHKLMLFSGVSVLTPLAIRFNPADTALELFQFINA*TQRVSTMHTTAFVRRCLHNELRCKVVDMPFDa*SGLSMLV 165
Cdd:cd19549  149 -LDPSTVMYLISYIYFKGKWEKPFDPKLTQEDDFHVDEDTTVPVQMMKRTDRFDIYYDQEISTTVLRLPYN--GSASMML 225
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 166 LLPYDGteLRQIVNSI*PAHLAQIDERLQSCWTDLKLPKFFVREKTDPKQTLGKLGYGGVFEID-DLHVFHDSGRTRLNG 244
Cdd:cd19549  226 LLPDKG--MATLEEVICPDHIKKWHKWMKRRSYDVSVPKFSVKTSYSLKDILSEMGMTDMFGDSaDLSGISEEVKLKVSE 303
                        250
                 ....*....|....
gi 240271166 245 FIQHCYLAVSESGS 258
Cdd:cd19549  304 VVHKATLDVDEAGA 317
serpinA9_centerin cd19556
serpin family A member 9, centerin; Centerin, also known as germinal center B-cell-expressed ...
14-270 1.14e-05

serpin family A member 9, centerin; Centerin, also known as germinal center B-cell-expressed transcript 1/GCET1, is a serpin whose expression is restricted to germinal center B-cells and lymphoid malignancies with germinal center B-cell maturation. Expression of centerin, together with bcl-6 and GCET2, constitutes a germinal center B-cell signature, which is associated with a good prognosis in diffuse large B-cell lymphomas. Centerin is thought to function in vivo in the germinal centre as an efficient inhibitor of a trypsin-like protease. It also inhibits the trypsin-like serine proteases trypsin, thrombin and plasmin and is able to bind heparin and DNA. The centerin gene maps to the A clade serpin cluster on chromosome 14q32.1, which also contains a1-antitrypsin and a1-antichymotrypsin together with seven other serpins. The clade A of the serpin superfamily includes the classical serine proteinase inhibitors, alpha-1-antitrypsin and alpha-1-antichymotrypsin, protein C inhibitor, kallistatin, and non-inhibitory serpins, like corticosteroid and thyroxin binding globulins. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381024 [Multi-domain]  Cd Length: 388  Bit Score: 46.18  E-value: 1.14e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  14 HDGQHLKALSFVLVEETLRLDSEFERLFHRTFQTTVEPVDLTDDIPSALAVNSFYQRANT-EIEDFIGEGDVFSlppchK 92
Cdd:cd19556   96 SKDLTLKMGSALFVKKELQLQANFLGNVKRLYEAEVFSTDFSNPSIAQARINSHVKKKTQgKVVDIIQGLDLLT-----A 170
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  93 LMLFSGVSVLTPLAIRFNPADTAlELFQFI--NA*TQRVSTMHTTAFVRRCLHNELRCKVVDMPF--DA*SglsmLVLLP 168
Cdd:cd19556  171 MVLVNHIFFKAKWEKPFHPEYTR-KNFPFLvgEQVTVHVPMMHQKEQFAFGVDTELNCFVLQMDYkgDAVA----FFVLP 245
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 169 YDGtELRQIVNSI*PAHLAQIDERLQSCWTDLKLPKFFVREKTDPKQTLGKLGYGGVFEID-DLHVFHDSGRTRLNGFIQ 247
Cdd:cd19556  246 SKG-KMRQLEQALSARTLRKWSHSLQKRWIEVFIPRFSISASYNLETILPKMGIQNAFDKNaDFSGIAKRDSLQVSKATH 324
                        250       260       270
                 ....*....|....*....|....*....|..
gi 240271166 248 HCYLAVSESGSGIPAPP---------DTPSEF 270
Cdd:cd19556  325 KAVLDVSEEGTEATAATttkfivrskDGPSYF 356
serpinA_A1AT-like cd19548
serpin family A member, alpha-1-antitrypsin and similar serpin proteins in birds and reptiles; ...
109-258 1.24e-05

serpin family A member, alpha-1-antitrypsin and similar serpin proteins in birds and reptiles; The alpha-1-antitrypsin family has a variety of different members of sauropsida belonging to the clade A of the serpin superfamily. This branch includes members from zebra finch, green anole, king cobra, gekko, crocodile, and central bearded dragon. Alpha-1-antitrypsin (also called A1AT, A1A, AAT, alpha1-proteinase inhibitor/A1PI, alpha1-antiproteinase/A1AP, and serum trypsin inhibitor) is a protease inhibitor. Clade A includes the classical serine proteinase inhibitors, alpha-1-antitrypsin and alpha-1-antichymotrypsin, protein C inhibitor, kallistatin, and non-inhibitory serpins, like corticosteroid and thyroxin binding globulins. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381016 [Multi-domain]  Cd Length: 370  Bit Score: 45.75  E-value: 1.24e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 109 FNPADTALELFqFINA*TQ-RVSTMHTTAFVRRCLHNELRCKVVDMPFDA*SglSMLVLLPYDGtELRQIVNSI*PAHLA 187
Cdd:cd19548  176 FDPESTRERDF-FVDANTTvKVPMMHRDGYYKYYFDEDLSCTVVQIPYKGDA--SALFILPDEG-KMKQVEAALSKETLS 251
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 240271166 188 QIDERLQSCWTDLKLPKFFVREKTDPKQTLGKLGYGGVFEID-DLHVFHDSGRTRLNGFIQHCYLAVSESGS 258
Cdd:cd19548  252 KWAKSLRRQRINLSIPKFSISTSYDLKDLLQKLGVTDVFTDNaDLSGITGERNLKVSKAVHKAVLDVHESGT 323
serpinB7_megsin cd19566
serpin family B member 7, megsin; Megsin is named as such due to its primary expression in the ...
45-258 1.93e-05

serpin family B member 7, megsin; Megsin is named as such due to its primary expression in the mesangium, a structure associated with the capillaries in the glomerulus of the kidney. Megsin is thought to play a role in the regulation of a wide variety of processes in mesangial cells, such as matrix metabolism, cell proliferation, and apoptosis. Identification of the exact biological functions and target proteases of megsin will lead to the development of novel therapeutic approaches to glomerular diseases. Expression of this gene is upregulated in IgA nephropathy and mutations have been found to cause palmoplantar keratoderma, Nagashima type. Megsin belongs to the ovalbumin family of serpins (ov-serpins), a family of closely related proteins, whose members can be secreted (ovalbumin), cytosolic (leukocyte elastase inhibitor, LEI), or targeted to both compartments (plasminogen activator inhibitor 2, PAI-2). It also characterized by N- and C-terminal extensions, the absence of a signal peptide, and a Ser rather than an Asn residue at the penultimate position. The ov-serpins corresponds to clade B of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants can cause blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381032 [Multi-domain]  Cd Length: 380  Bit Score: 45.37  E-value: 1.93e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  45 FQTTVEPVDLTDDIP-SALAVNSFYQ-RANTEIEDFIGEGdvfSLPPCHKLMLFSGVSVLTPLAIRFNPADTALELFQFI 122
Cdd:cd19566  122 YNAKVERVDFTNHVEdTRRKINKWIEnETHGKIKKVIGES---SLSSSAVMVLVNAVYFKGKWKSAFTKSETLNCRFRSP 198
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 123 NA*TQRVSTMHTTAFVRRCLHNELRCKVVDMPFDA*sGLSMLVLLPYDGteLRQIVNSI*PAHLAQIDER--LQSCWTDL 200
Cdd:cd19566  199 KCSGKAVAMMHQERKFNLSTIQDPPMQVLELQYHG--GINMYIMLPEND--LSEIENKLTFQNLMEWTNRrrMKSQYVEV 274
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 201 KLPKFFVREKTDPKQTLGKLGYGGVFEID--DLHVFHDSGRTRLNGFIQHCYLAVSESGS 258
Cdd:cd19566  275 FLPQFKIEKNYEMKHHLKSLGLKDIFDESkaDLSGIASGGRLYVSKLMHKSFIEVTEEGT 334
serpinD1_HCF2 cd02047
serpin family D member 1, Heparin cofactor II; Heparin cofactor II (HCF2/HC-II, also called ...
107-258 3.45e-05

serpin family D member 1, Heparin cofactor II; Heparin cofactor II (HCF2/HC-II, also called protease inhibitor leuserpin-2/hLS2) is a protein encoded by the SERPIND1 gene that inhibits thrombin, the final protease of the coagulation cascade. HCII is allosterically activated by binding to cell surface glycosaminoglycans (GAGs). The specificity of HCII for thrombin is conferred by a highly acidic hirudin-like N-terminal tail, which becomes available after GAG binding for interaction with the anion-binding exosite I of thrombin. HCII deficiency can lead to increased thrombin generation and a hypercoagulable state. This subgroup corresponds to clade D of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381004 [Multi-domain]  Cd Length: 449  Bit Score: 44.71  E-value: 3.45e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 107 IRFNPADTALELFQFINA*TQRVSTMHTTAFVRRCLHNELRCKVVDMPFDA*sGLSMLVLLPYDGTELRQIVNSI*Pahl 186
Cdd:cd02047  251 NKFPVEMTHNRNFRLNEKEVVKVPMMQTKGNFLAAADHELDCDILQLPYVG--NISMLIVVPHKLSGMKTLEAQLTP--- 325
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 240271166 187 aQIDERLQSCWT----DLKLPKFFVREKTDPKQTLGKLGYGGVFEIDDLHVFHDSGRTRLNGFIQHCYLAVSESGS 258
Cdd:cd02047  326 -QVVEKWQKSMTnrtrEVLLPKFKLEKNYDLIEVLKEMGVTDLFTANGDFSGISDKDIIIDLFKHQGTITVNEEGT 400
serpinB11_epipin cd19570
serpin family B member 11, epipin; Epipin/SERPINB11 has no serine protease inhibitory activity, ...
108-258 3.86e-05

serpin family B member 11, epipin; Epipin/SERPINB11 has no serine protease inhibitory activity, probably due to mutations in the scaffold, impairing conformational changes, and may have evolved a non-inhibitory function. The ovalbumin family of serpins (ov-serpins) is a family of closely related proteins, whose members can be secreted (ovalbumin), cytosolic (leukocyte elastase inhibitor, LEI), or targeted to both compartments (plasminogen activator inhibitor 2, PAI-2). It also characterized by N- and C-terminal extensions, the absence of a signal peptide, and a Ser rather than an Asn residue at the penultimate position. The ov-serpins corresponds to clade B of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants can cause blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381036 [Multi-domain]  Cd Length: 392  Bit Score: 44.39  E-value: 3.86e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 108 RFNPADTALELFQFINA*TQRVSTMHTTAFVRRCLHNELRCKVVDMPFdA*SGLSMLVLLPYDGTELRQIVNsi*pahla 187
Cdd:cd19570  191 KFQERETVKTPFQLSEGKSVPVEMMYQSGTFKLASIKEPQMQVLELPY-VNNKLSMIILLPVGTANLEQIEK-------- 261
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 188 QIDERLQSCWT----------DLKLPKFFVREKTDPKQTLGKLGYGGVFEID--DLHVFHDSGRTRLNGFIQHCYLAVSE 255
Cdd:cd19570  262 QLNVKTFKEWTsssnmverevEVHIPRFKLEIKYELNSLLKSLGMTDIFDQAkaDLSGMSPDKGLYLSKVIHKSYVDVNE 341

                 ...
gi 240271166 256 SGS 258
Cdd:cd19570  342 EGT 344
serpinN_SPI-1_SPI-2 cd19583
serpin family N, viral serpin-1 and serpin-2; This group of viral serpins are from the ...
109-255 8.93e-05

serpin family N, viral serpin-1 and serpin-2; This group of viral serpins are from the Orthopoxvirus branch (cowpox, ectromelia, vaccinia, variola, and rabbitpox) and corresponding to clade N which contains viral serpin-1 (SPI-1-like) and viral serpin-2 (SPI-2-like) serpins. The other is clade O which contains the viral serpin-3 (SPI-3-like) serpins. SPI-2, also called cytokine response modifier A (crmA), acts to inhibit inflammation and apoptosis. SPI-1, a serpin that is approximately 45% identical to SPI-2, has also been implicated in the inhibition of apoptosis, since certain cells infected with RPV SPI-1 mutants undergo apoptotic cell death. SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381049 [Multi-domain]  Cd Length: 347  Bit Score: 43.32  E-value: 8.93e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 109 FNPADTALELFQFINA*TQRVSTMHTTAFVRRCLH-NEL--RCKVVDMPFDA*SglSMLVLLPYDGTELRQIVNSI*PAH 185
Cdd:cd19583  152 FSKHLTYTDKFYISKTIVVSVDMMVGTENDFQYVHiNELfgGFSIIDIPYEGNT--SMVVILPDDIDGLYNIEKNLTDEN 229
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 240271166 186 LAQIDERLQSCWTDLKLPKFFVR-EKTDPKQTLGKLGYGGVF-EIDDLHVFHDSGRTrLNGFIQHCYLAVSE 255
Cdd:cd19583  230 FKKWCNMLSTKSIDLYMPKFKVEtESYNLVPILEKLGLTDIFgYYADFSNMCNETIT-VEKFLHKTYIDVNE 300
serpinE2_GDN cd19573
serpin family E member 2, glia derived nexin (GDN); Serpin glia-derived nexin (GDN; also ...
45-227 9.35e-05

serpin family E member 2, glia derived nexin (GDN); Serpin glia-derived nexin (GDN; also called peptidase inhibitor 7/PI-7 or protease nexin 1/PN-1) is a specific and extremely efficient inhibitor of thrombin. Unlike other thrombin inhibitors, it is not synthesized in the liver and does not circulate in the blood. It is instead expressed by multiple cell types and is located on the surface of these cells, bound to glycosaminoglycans. GDN plays a role in thrombosis and atherosclerosis and is a clade E serpin. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381039 [Multi-domain]  Cd Length: 375  Bit Score: 43.20  E-value: 9.35e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  45 FQTTVEPVDLTDDIPSALAVNsFYQRANTE--IEDFIGEGDVFSLPPchKLMLFSGVSVLTPLAIRFNPADTALELFQFI 122
Cdd:cd19573  114 FQCEVRSVDFEDPESAADSIN-QWVKNQTRgmIDNLVSPDLIDGALT--RLVLVNAVYFKGLWKSRFQPENTKKRTFYAA 190
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 123 NA*TQRVSTMHTTAFVRRCLH---NELRCKVVDMPFDA*SgLSMLVLLPYD-GTELRQIVNSI*PAhlaqideRLQScWT 198
Cdd:cd19573  191 DGKSYQVPMLAQLSVFRCGSTstpNGLWYNVIELPYHGES-ISMLIALPTEsSTPLSAIIPHISTK-------TIQS-WM 261
                        170       180       190
                 ....*....|....*....|....*....|....*..
gi 240271166 199 --------DLKLPKFFVREKTDPKQTLGKLGYGGVFE 227
Cdd:cd19573  262 ntmvpkrvQLILPKFTAEAETDLKEPLKALGITDMFD 298
serpinB8_CAP-2 cd19567
serpin family B member 8, cytoplasmic antiproteinase 2; Cytoplasmic antiproteinase 2 (CAP-2 or ...
19-258 9.48e-05

serpin family B member 8, cytoplasmic antiproteinase 2; Cytoplasmic antiproteinase 2 (CAP-2 or peptidase inhibitor 8/PI-8) is a member of the ovalbumin family of serpins (ov-serpins). Serpin B8 is produced by platelets and can bind to and inhibit the function of furin, a serine protease involved in platelet functions. In addition, this protein has been found to enhance the mechanical stability of cell-cell adhesion in the skin, and defects in this gene have been associated with an autosomal-recessive form of exfoliative ichthyosis. Diseases associated with SERPINB8 include Peeling Skin Syndrome 5 and Exfoliative Ichthyosis. Among its related pathways are Response to elevated platelet cytosolic Ca2+ and CFTR-dependent regulation of ion channels in Airway Epithelium (norm and CF). The ov-serpins are a family of closely related proteins, whose members can be secreted (ovalbumin), cytosolic (leukocyte elastase inhibitor, LEI), or targeted to both compartments (plasminogen activator inhibitor 2, PAI-2). It also characterized by N- and C-terminal extensions, the absence of a signal peptide, and a Ser rather than an Asn residue at the penultimate position. The ov-serpins corresponds to clade B of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants can cause blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381033 [Multi-domain]  Cd Length: 374  Bit Score: 43.08  E-value: 9.48e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  19 LKALSFVLVEETLRLDSEFERLFHRTFQTTVEPVDLTDDIPSALA-VNSFY-QRANTEIEDFIGEGDVfslPPCHKLMLF 96
Cdd:cd19567   86 LRTANRLFGEKTCDFLPTFKESCQKFYQAGLEELSFAEDTEECRKhINDWVsEKTEGKISEVLSAGTV---CPLTKLVLV 162
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  97 SGVSVLTPLAIRFNPADTALELFQfINA*TQRVSTMHTTAFVRRCLHNELRCKVVDMPFdA*SGLSMLVLLPYDGTELRQ 176
Cdd:cd19567  163 NAIYFKGKWNEQFDRKYTRGMPFK-TNQEKKTVQMMFKHAKFKMGHVDEVNMQVLELPY-VEEELSMVILLPDENTDLAV 240
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 177 IVNSI*PAHLAQI--DERLQSCWTDLKLPKFFVREKTDPKQTLGKLGYGGVFE--IDDLHVFHDSGRTRLNGFIQHCYLA 252
Cdd:cd19567  241 VEKALTYEKFRAWtnPEKLTESKVQVFLPRLKLEESYDLETFLRNLGMTDAFEeaKADFSGMSTKKNVPVSKVAHKCFVE 320

                 ....*.
gi 240271166 253 VSESGS 258
Cdd:cd19567  321 VNEEGT 326
serpinC1_AT3 cd02045
serpin family C member 1, antithrombin III; Antithrombin III (AT3/ATIII) is a non-vitamin ...
108-258 9.71e-05

serpin family C member 1, antithrombin III; Antithrombin III (AT3/ATIII) is a non-vitamin K-dependent serine protease that inhibits coagulation by neutralizing the enzymatic activity of thrombin (factors IIa, IXa, Xa). It is the most important anticoagulant molecule in mammalian circulation systems, controlled by its interaction with the cofactor, heparin, which accelerates its interaction with target proteases. This subgroup corresponds to clade C of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants can cause blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381002 [Multi-domain]  Cd Length: 395  Bit Score: 43.24  E-value: 9.71e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 108 RFNPADTALELFQFINA*TQRVSTMHTTAFVRRCLHNELRCKVVDMPFDA*SgLSMLVLLPYDGTELRQIVNSI*PAHLA 187
Cdd:cd02045  191 KFSPENTRKELFYKADGESCSVPMMYQEGKFRYRRVAEDGVQVLELPYKGDD-ITMVLILPKPEKSLAKVEKELTPEKLQ 269
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 240271166 188 QIDERLQSCWTDLKLPKFFVREKTDPKQTLGKLGYGGVF--EIDDLHVFHDSGRTRL---NGFiQHCYLAVSESGS 258
Cdd:cd02045  270 EWLDELEETMLVVHMPRFRIEDSFSLKEQLQDMGLVDLFspEKAKLPGIVAGGRDDLyvsDAF-HKAFLEVNEEGS 344
serpinE3 cd19574
serpin family E member 3; The function of serpin E3 is not known. It is a member of clade E, ...
108-226 1.84e-04

serpin family E member 3; The function of serpin E3 is not known. It is a member of clade E, which also includes nexin and plasminogen activator inhibitor type 1, of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381040 [Multi-domain]  Cd Length: 384  Bit Score: 42.31  E-value: 1.84e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 108 RFNPADTALELFQFINA*TQRVSTMHTTAFVRRC---LHNELRCKVVDMPFDA*SgLSMLVLLPYD-GTELRQIVNSI*P 183
Cdd:cd19574  183 QFSFTDTQNLPFTLADGSTLKVPMMYQTAEVNFGqfqTPSEQRYTVLELPYLGNS-LSLFLVLPSDrKTPLSLIEPHLTA 261
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 240271166 184 AHLAQIDERLQSCWTDLKLPKFFVREKTDPKQTLGKLGYGGVF 226
Cdd:cd19574  262 RTLALWTTSLRRTKMDIFLPRFKIQNKFNLKSVLPALGISDAF 304
serpinA5_PCI cd19553
serpin family A member 5, protein C inhibitor; Protein C inhibitor (PCI/PROCI, also called ...
7-258 2.24e-04

serpin family A member 5, protein C inhibitor; Protein C inhibitor (PCI/PROCI, also called PAI3, plasminogen activator inhibitor-3/PLANH3, plasma serine protease inhibitor) has many biological functions. It acts as a pro-coagulant in blood and in the seminal vesicles, it is required for spermatogenesis. It is a member of the clade A serpin family that includes the classical serine proteinase inhibitors, alpha-1-antitrypsin and alpha-1-antichymotrypsin, protein C inhibitor, kallistatin, and non-inhibitory serpins, like corticosteroid and thyroxin binding globulins. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381021 [Multi-domain]  Cd Length: 364  Bit Score: 42.06  E-value: 2.24e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166   7 QRLAQQL---HDGQHLKALSFVLVEETLRLDSEFERLFHRTFQTTVEPVDLTDDIPSALAVNSFYQRANT-EIEDFIGeg 82
Cdd:cd19553   69 QQLLQELnqpRDGFQLSLGNALFTDLVVDIQDTFLSAMKTLYLADTFPTNFEDPAGAKKQINDYVAKQTKgKIVDLIK-- 146
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  83 dvfSLPPCHKLMLFSGVSVLTPLAIRFNPADTALELFQFINA*TQRVSTMHTTAFVRRCLHNELRCKVVDMPFDA*sGLS 162
Cdd:cd19553  147 ---NLDSTTVMVMVNYIFFKAKWETSFNPKGTQEQDFYVTPETVVQVPMMNREDQYHYLLDRNLSCRVVGVPYQG--NAT 221
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 163 MLVLLPYDGtELRQIVNSI*PAHLAQIDERLQSCWTDLKLPKFFVREKTDPKQTLGKLGYGGVFEID-DLHVFHDSGRTR 241
Cdd:cd19553  222 ALFILPSEG-KMEQVENGLSEKTLRKWLKMFRKRQLNLYLPKFSIEGSYQLEKVLPKLGIRDVFTSHaDLSGISNHSNIQ 300
                        250
                 ....*....|....*..
gi 240271166 242 LNGFIQHCYLAVSESGS 258
Cdd:cd19553  301 VSEMVHKAVVEVDESGT 317
serpinB6_CAP cd19565
serpin family B member 6, cytoplasmic antiproteinase; Cytoplasmic antiproteinase (CAP, also ...
19-227 4.04e-04

serpin family B member 6, cytoplasmic antiproteinase; Cytoplasmic antiproteinase (CAP, also called proteinase inhibitor 6/PI6 or placental thrombin inhibitor/PTI) is thought to be involved in the regulation of serine proteinases present in the brain or extravasated from the blood. It may play an important role in the inner ear in the protection against leakage of lysosomal content during stress; loss of this protection results in cell death and sensorineural hearing loss. It is an inhibitor of cathepsin G, kallikrein-8 and thrombin. The ovalbumin family of serpins (ov-serpins) is a family of closely related proteins, whose members can be secreted (ovalbumin), cytosolic (leukocyte elastase inhibitor, LEI), or targeted to both compartments (plasminogen activator inhibitor 2, PAI-2). It also characterized by N- and C-terminal extensions, the absence of a signal peptide, and a Ser rather than an Asn residue at the penultimate position. The ov-serpins corresponds to clade B of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants can cause blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381031 [Multi-domain]  Cd Length: 378  Bit Score: 41.43  E-value: 4.04e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  19 LKALSFVLVEETLRLDSEFERLFHRTFQTTVEPVDLTDDIP-SALAVNSFYQRaNTE--IEDFIGEGDVFSLPpchKLML 95
Cdd:cd19565   89 LRTANRLFGEKTCDFLSSFKDSCQKFYQAEMEELDFISATEkSRKHINTWVAE-KTEgkIAELLSPGSVNPLT---RLVL 164
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  96 FSGVSVLTPLAIRFNPADTALELFQFINA*TQRVSTMHTTAFVRRCLHNELRCKVVDMPFdA*SGLSMLVLLPYDGTELR 175
Cdd:cd19565  165 VNAVYFKGNWDEQFNKENTEERPFKVSKNEEKPVQMMFKKSTFKKTYIGEIFTQILVLPY-VGKELNMIIMLPDETTDLR 243
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 240271166 176 QIVNS------I*PAHLAQIDERlqscWTDLKLPKFFVREKTDPKQTLGKLGYGGVFE 227
Cdd:cd19565  244 TVEKEltyekfVEWTRLDMMDEE----EVEVFLPRFKLEESYDMESVLYKLGMTDAFE 297
serpinB9_CAP-3 cd19568
serpin family B member 9, cytoplasmic antiproteinase 3; Cytoplasmic antiproteinase 3 (CAP-3; ...
122-262 6.70e-04

serpin family B member 9, cytoplasmic antiproteinase 3; Cytoplasmic antiproteinase 3 (CAP-3; peptidase inhibitor 9/PI-9, Spi6, or testicular tissue protein Li 180) is an intracellular inhibitor of granzyme B (grB) that protects cytotoxic lymphocytes from grB-mediated death. It is also thought to be expressed in accessory immune cells, including dendritic cells (DCs), although there is some debate about this. Overexpression of serpin B9 may prevent cytotoxic T-lymphocytes from eliminating certain tumor cells. A pseudogene of this gene is found on chromosome 6. Diseases associated with serpin B9 include chronic obstructive pulmonary disease (COPD) and oral squamous cell carcinoma (OSCC). The ovalbumin family of serpins (ov-serpins) is a family of closely related proteins, whose members can be secreted (ovalbumin), cytosolic (leukocyte elastase inhibitor, LEI), or targeted to both compartments (plasminogen activator inhibitor 2, PAI-2). It also characterized by N- and C-terminal extensions, the absence of a signal peptide, and a Ser rather than an Asn residue at the penultimate position. The ov-serpins corresponds to clade B of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants can cause blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381034 [Multi-domain]  Cd Length: 376  Bit Score: 40.62  E-value: 6.70e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 122 INA*TQRVSTMHTTAFVRRCLH-NELRCKVVDMPFdA*SGLSMLVLLPYDGTELRQIVNSI*PAHLA--QIDERLQSCWT 198
Cdd:cd19568  187 INQEEQRPVQMMFQEATFPLAHvGEVRAQVLELPY-AGQELSMLVLLPDDGVDLSTVEKSLTFEKFQawTSPECMKRTEV 265
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 240271166 199 DLKLPKFFVREKTDPKQTLGKLGYGGVFEID--DLHVFHDSGRTRLNGFIQHCYLAVSESGSGIPA 262
Cdd:cd19568  266 EVLLPKFKLQEDYDMVSVLQGLGIVDAFQQGkaDLSAMSADRDLCLSKFVHKSVVEVNEEGTEAAA 331
serpinA7_TBG cd19555
serpin family A member 7, thyroxine-binding globulin; Thyroxine-binding globulin (TBG, also ...
109-263 6.92e-04

serpin family A member 7, thyroxine-binding globulin; Thyroxine-binding globulin (TBG, also called T4-binding globulin) is a globulin that binds thyroid hormones in circulation. It is one of three transport proteins (along with transthyretin and serum albumin) responsible for carrying the thyroid hormones thyroxine (T4) and triiodothyronine (T3) in the bloodstream. TBG is synthesized primarily in the liver and is a serpin with no inhibitory function like many other members of this class of proteins. There are two forms of inherited thyroxine-binding globulin deficiency: the complete form (TBG-CD), which results in a total loss of thyroxine-binding globulin, and the partial form (TBG-PD), which reduces the amount of this protein or alters its structure. Neither of these conditions causes any problems with thyroid function, but it can be mistaken for more serious thyroid disorders, such as hypothyroidism. This family belongs to the clade A of the serpin superfamily, which includes the classical serine proteinase inhibitors, alpha-1-antitrypsin and alpha-1-antichymotrypsin, protein C inhibitor, kallistatin, and non-inhibitory serpins, like corticosteroid and thyroxin binding globulins. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381023 [Multi-domain]  Cd Length: 379  Bit Score: 40.75  E-value: 6.92e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 109 FNPADTAlELFQFI--NA*TQRVSTMHTTAFVRRCLHNELRCKVVDMPFdA*SGLSMLVLlPYDGtELRQIVNSI*PAHL 186
Cdd:cd19555  178 FDPSKTE-ESSSFLvdKTTTVQVPMMHQMEQYYHLVDMELNCTVLQMDY-SKNALALFVL-PKEG-QMEWVEAAMSSKTL 253
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 187 AQIDERLQSCWTDLKLPKFFVREKTDPKQTLGKLGYGGVF-EIDDLhvfhdSGRTRLNGF-----IQHCYLAVSESGS-G 259
Cdd:cd19555  254 KKWNRLLQKGWVDLFVPKFSISATYDLGATLLKMGIQDAFaENADF-----SGLTEDNGLklsnaAHKAVLHIGEKGTeA 328

                 ....
gi 240271166 260 IPAP 263
Cdd:cd19555  329 AAVP 332
serpin_poxvirus cd19585
serpin-like proteins found in poxviruses; These are viral serpins from poxviridae that are not ...
31-229 9.82e-04

serpin-like proteins found in poxviruses; These are viral serpins from poxviridae that are not in the Orthopoxvirus branch (cowpox, ectromelia, vaccinia, variola, and rabbitpox) that contains clade N serpins (viral serpin-1/SPI-1-like and viral serpin-2/SPI-2-like) and clade O serpins (viral serpin-3/SPI-3-like). The members here include fowlpox virus, canarypox virus, deerpox virus, tanapox virus, an cotia virus and belong to other poxviridae branches including Leporipoxvirus, Yatapoxvirus, and Avipoxvirus. These viruses have a variety of hosts including humans, birds, and mice. SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381051 [Multi-domain]  Cd Length: 345  Bit Score: 40.07  E-value: 9.82e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  31 LRLDSEFERLFHRTFQTTVEPVDLTDDIPSALavnsfYQRANTEIEDFIgegDVFSLPPCHKLMLFSGVSVLTPLAIRFN 110
Cdd:cd19585   81 IRNNKRINKSFKNYFNKTNKTVTFNNIINDYV-----YDKTNGLNFDVI---DIDSIRRDTKMLLLNAIYFNGLWKHPFP 152
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 111 PADTALELFQFINA*TQRVSTMHTTAFVRRC-LHNELRCKVVDMPFDa*SGLSMLVLLPYDGTELRQIVNSI*PAHLAQI 189
Cdd:cd19585  153 PEDTDDHIFYVDKYTTKTVPMMATKGMFGTFyCPEINKSSVIEIPYK-DNTISMLLVFPDDYKNFIYLESHT-PLILTLS 230
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|...
gi 240271166 190 DERLQSCWTD---LKLPKFFVREKTDPKQTLGKLGYGGVFEID 229
Cdd:cd19585  231 KFWKKNMKYDdiqVSIPKFSIESQHDLKSVLTKLGITDIFDKD 273
serpinB14_OVA cd02059
serpin family B member 14, ovalbumin; The chicken protein ovalbumin (OVA3), a storage protein ...
27-258 1.45e-03

serpin family B member 14, ovalbumin; The chicken protein ovalbumin (OVA3), a storage protein from egg white, lacking a loop insertion mechanism and therefore protease inhibitory activity, is a historical member of the serpin superfamily and the founding member of the subgroup known as ov-serpins (ovalbumin-related serpins). It has several modifications, including N-terminal acetylation, phosphorylation, and glycosylation. Ovalbumin is secreted from the cell, targeted by an internal signal sequence, rather than the N-terminal signal sequence commonly found in other secreted proteins. The ovalbumin family of serpins (ov-serpins) is a family of closely related proteins, whose members can be secreted (ovalbumin), cytosolic (leukocyte elastase inhibitor, LEI), or targeted to both compartments (plasminogen activator inhibitor 2, PAI-2). It also characterized by N- and C-terminal extensions, the absence of a signal peptide, and a Ser rather than an Asn residue at the penultimate position. The ov-serpins corresponds to clade B of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants can cause blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381015 [Multi-domain]  Cd Length: 385  Bit Score: 39.47  E-value: 1.45e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  27 VEETLRLDSEFERLFHRTFQTTVEPVDLTDDIPSALA-VNSFYQ-RANTEIEDFIGEGdvfSLPPCHKLMLFSGVSVLTP 104
Cdd:cd02059  107 AEETYPILPEYLQCVKELYRGGLEPVNFQTAADQARElINSWVEsQTNGIIRNVLQPS---SVDSQTAMVLVNAIYFKGL 183
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 105 LAIRFNPADTALELFQFINA*TQRVSTMHTTAFVRRCLHNELRCKVVDMPFdA*SGLSMLVLLPYDGTELRQIVNSI*PA 184
Cdd:cd02059  184 WEKAFKDEDTQEMPFRVTEQESKPVQMMYQIGSFKVASMASEKMKILELPF-ASGTMSMLVLLPDEVSGLEQLESTISFE 262
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 185 HLAQiderlqscWTD----------LKLPKFFVREKTDPKQTLGKLGYGGVFEID-DLHVFHDSGRTRLNGFIQHCYLAV 253
Cdd:cd02059  263 KLTE--------WTSsnvmeerkikVYLPRMKMEEKYNLTSVLMAMGITDLFSSSaNLSGISSAESLKISQAVHAAHAEI 334

                 ....*
gi 240271166 254 SESGS 258
Cdd:cd02059  335 NEAGR 339
serpinA4_KST cd19552
serpin family A member 4, kallistatin; Kallistatin (KST, also called proteinase inhibitor 4 ...
39-226 1.87e-03

serpin family A member 4, kallistatin; Kallistatin (KST, also called proteinase inhibitor 4/PI4, or kallikrein inhibitor/KAL) is a protein that in humans is encoded by the SERPINA4 gene. Kallistatin inhibits human amidolytic and kininogenase activities of tissue kallikrein. Heparin blocks kallistatin's complex formation with tissue kallikrein and abolishes its inhibitory effect on tissue kallikrein's activity. Kallistatin was found to be expressed in human liver, stomach, pancreas, kidney, aorta, testes, prostate, artery, atrium, ventricle, lung, renal proximal tubular cell, and a colonic carcinoma cell line T84. This family belongs to the clade A of the serpin superfamily, which includes the classical serine proteinase inhibitors, alpha-1-antitrypsin and alpha-1-antichymotrypsin, protein C inhibitor, kallistatin, and non-inhibitory serpins, like corticosteroid and thyroxin binding globulins. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381020 [Multi-domain]  Cd Length: 383  Bit Score: 39.41  E-value: 1.87e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  39 RLFHRTFQTTVEPVDLTDDipsalavnsfYQRANT--EIEDFIGEgdvfsLPPCHKLMLFSGVSVLTPLAIRFNPADTAL 116
Cdd:cd19552  123 KVFHTNFQDAVGAERLIND----------HVREETrgKISDLVSD-----LSRDVKMVLVNYIYFKALWEKPFPPSRTAP 187
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 117 ELFQFINA*TQRVSTMHTTAFVRRCLHNE-LRCKVVDMpfDA*SGLSMLVLLPYDGtELRQIVNSI*PAHLAQIDERLQS 195
Cdd:cd19552  188 SDFHVDENTVVQVPMMLQDQEYHWYLHDRrLPCSVLRM--DYKGDATAFFILPDQG-KMREVEQVLSPGMLMRWDRLLQN 264
                        170       180       190
                 ....*....|....*....|....*....|....*
gi 240271166 196 CWTDLKL----PKFFVREKTDPKQTLGKLGYGGVF 226
Cdd:cd19552  265 RYFYRKLelhfPKFSISGSYELDQILPELGFQDLF 299
serpin28D-like_insects cd19597
insect serpins similar to Drosophila melanogaster Serpin-28D; Serpins in insects function ...
25-257 2.32e-03

insect serpins similar to Drosophila melanogaster Serpin-28D; Serpins in insects function within development, wound healing and immunity. Drosophila melanogaster Serpin-28D is required for pupal viability and plays an essential role in regulating melanization. Insect serpins from mosquitoes, Mediterranean fruit fly, fruit fly, and blowfly are included in this subfamily. SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381061 [Multi-domain]  Cd Length: 395  Bit Score: 38.81  E-value: 2.32e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  25 VLVEETLRLDSEFERLFHRTFQTTVEPVDLTDDIPSALA-VNSFYQRA-NTEIEDFIGEgdvfSLPPCHKLMLfsgVSVL 102
Cdd:cd19597  118 IFVQRGLPLNPRYRRVARELYGSEIQRLDFEGNPAAARAlINRWVNKStNGKIREIVSG----DIPPETRMIL---ASAL 190
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 103 -------TPlairFNPADTALELFqFINA*TQ---RVSTMHTTAfvrrCL--HN--ELRCKVVDMPFDA*SGlSMLVLLP 168
Cdd:cd19597  191 yfkafweTM----FIEQATRPRPF-YPDGEGEpsvKVQMMATGG----CFpyYEspELDARIIGLPYRGNTS-TMYIILP 260
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 169 YDG--TELRQIVNSI*PAHLAQIDERLQSCWTDLKLPKFFVREKTDPKQTLGKLGYGGVFEID------DLHVfhdsgrt 240
Cdd:cd19597  261 NNSsrQKLRQLQARLTAEKLEDMISQMKRRTAMVLFPKMHLTNSINLKDVLQRLGLRSIFNPSrsnlspKLFV------- 333
                        250
                 ....*....|....*..
gi 240271166 241 rlNGFIQHCYLAVSESG 257
Cdd:cd19597  334 --SEIVHKVDLDVNEQG 348
serpinB10_bomapin cd19569
serpin family B member 10, bomapin; Bomapin (also called proteinase inhibitor 10/PI10) is a ...
161-226 4.53e-03

serpin family B member 10, bomapin; Bomapin (also called proteinase inhibitor 10/PI10) is a hematopoietic- and myeloid leukaemia-specific protease inhibitor which is thought to augment proliferation or apoptosis of leukemia cells, depending on growth factor availability. Bomapin is expressed only in bone marrow, leukocytes of patients with myeloid leukaemia that correspond to myeloid progenitors, and promyelocytic leukaemia cell lines (HL60, THP1, and AML-193), but it is not present in terminally differentiated leukocytes. The ovalbumin family of serpins (ov-serpins) is a family of closely related proteins, whose members can be secreted (ovalbumin), cytosolic (leukocyte elastase inhibitor, LEI), or targeted to both compartments (plasminogen activator inhibitor 2, PAI-2). It also characterized by N- and C-terminal extensions, the absence of a signal peptide, and a Ser rather than an Asn residue at the penultimate position. The ov-serpins corresponds to clade B of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants can cause blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381035 [Multi-domain]  Cd Length: 397  Bit Score: 37.92  E-value: 4.53e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 240271166 161 LSMLVLLPYDGTELRQIVNSI*PAHLAQ--IDERLQSCWTDLKLPKFFVREKTDPKQTLGKLGYGGVF 226
Cdd:cd19569  248 LSLLILLPEDINGLEQLEKAITYEKLNEwtSADMMELYEVQLHLPKFKLEESYDLKSTLSSMGMSDAF 315
serpinA14_UTMP_UABP-2 cd19559
serpin family A member 14, uterine milk protein and uteroferrin-associated basic protein 2; ...
7-226 5.02e-03

serpin family A member 14, uterine milk protein and uteroferrin-associated basic protein 2; The uteroferrin(Uf)-associated basic proteins-2(UABP-2/UABP/UfAP) are a group of three (Mr = 42K, 48K, and 50K) antigenically related, basic glycoproteins secreted by the porcine uterus under the influence of progesterone (P4), which exist as heterodimers (Mr = 80,000) with the iron-binding acid phosphatase, Uf. This group also contains UTMP (uterine milk protein), encoded by SERPINA14. UTMP binds noncovalently to the iron-containing glycoprotein uteroferrin, which displays phosphatase activity and is thought to be involved with iron transport to the fetus. Synthesis of these serpins is induced by progesterone in the uterus. UTMP is also an activin-binding protein and has been implicated in regulation of uterine immune function. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381027 [Multi-domain]  Cd Length: 386  Bit Score: 37.81  E-value: 5.02e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166   7 QRLAQQLHD---GQHLKALSFVLVEETLRLDSEFERLFHRTFQTTVEPVDLTDDIPSALAVNSFY-QRANTEIEDFIGeg 82
Cdd:cd19559   86 QHLVQLLHElvrQKQLKHQDILFIDSNRKINQMFLHEIEKLYKVDIQMIDFRDKEKAKKQINHFVaEKMHKKIKELIT-- 163
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166  83 dvfSLPPCHKLMLFSGVSVLTPLAIRFNPADTALELFqFINA*TQ-RVSTMHTTAFVRRCLHNELRCKVVDMPFda*SGL 161
Cdd:cd19559  164 ---DLDPHTFLCLVNYIFFKGIWERAFQTNLTQKEDF-FVNEKTKvQVDMMRKTERMIYSRSEELFATMVKMPC--KGNV 237
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 240271166 162 SMLVLLPYDG---TELRQIVnsi*pahlAQIDERLQSC---WTDLKLPKFFVREKTDPKQTLGKLGYGGVF 226
Cdd:cd19559  238 SLVLVLPDAGqfdSALKEMA--------AKRARLQKSSdfrLVHLILPKFKISSKIDLKHLLPKIGIEDIF 300
serpinA3_A1AC cd19551
serpin family A member 3, alpha 1-antichymotrypsin; Alpha 1-antichymotrypsin (a1AC/A1AC/a1ACT ...
109-226 6.27e-03

serpin family A member 3, alpha 1-antichymotrypsin; Alpha 1-antichymotrypsin (a1AC/A1AC/a1ACT/AACT) is an alpha globulin glycoprotein that is a member of the serpin superfamily. In humans, it is encoded by the SERPINA3 gene. It inhibits the activity of proteases, such as cathepsin G that is found in neutrophils, and chymases found in mast cells, by cleaving them into a different shape or conformation. This activity protects some tissues, such as the lower respiratory tract, from damage caused by proteolytic enzymes. Deficiency of this protein has been associated with liver disease. Mutations have been identified in patients with Parkinson disease and chronic obstructive pulmonary disease. SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.


Pssm-ID: 381019 [Multi-domain]  Cd Length: 382  Bit Score: 37.63  E-value: 6.27e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 240271166 109 FNPADTALELFQFINA*TQRVSTMH----TTAFVRrclHNELRCKVVDMPFda*SGLSMLVLLPYDGtELRQIVNSI*PA 184
Cdd:cd19551  183 FDPDDTFQSEFYLDKKRSVKVPMMKienlTTPYFR---DEELSCTVVELKY--TGNASALFILPDQG-KMQQVEASLQPE 256
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 240271166 185 HLAQIDERLQSCWTD-LKLPKFFVREKTDPKQTLGKLGYGGVF 226
Cdd:cd19551  257 TLKRWRDSLRPRRIDeLYLPKFSISSDYNLEDILPELGIREVF 299
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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