|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 721.42 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 1 NDSFIDLPTPSSISAWWNFGSLLGICLALQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWVLRYLHANGASMFFICL 80
Cdd:MTH00100 15 NHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICL 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 81 YLHVGRGLYYGSYLYKETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKAT 160
Cdd:MTH00100 95 FLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKAT 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 161 LTRFFAFHFLLPFIISAMVMVHLLFLHETGSNNPTGIPSNADMIPFHPYYTIKDILGLFMMITILLALVLFAPDMLGDPD 240
Cdd:MTH00100 175 LTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGDPD 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 241 NYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVISILILIIIPLLHTSKQRSMTFRPISQCLFWLLAADLLT 320
Cdd:MTH00100 255 NYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLT 334
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 527468865 321 LTWIGGQPVEYPYVIIGQLASVLYFSIIIVFMPLVGLMENHLLKW 365
Cdd:MTH00100 335 LTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLLKW 379
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
2-359 |
3.11e-124 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 362.96 E-value: 3.11e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 2 DSFIDLPTPSSISAWWNFGSLLGICLALQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWVLRYLHANGASMFFICLY 81
Cdd:COG1290 25 REHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVY 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 82 LHVGRGLYYGSylYKE----TWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVD 157
Cdd:COG1290 105 LHMFRGFFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPG 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 158 KATLTRFFAFH-FLLPFIISAMVMVHLLFLHETGSNNPTGI----PSNADMIPFHPYYTIKDILGLFMMITILLALVLFA 232
Cdd:COG1290 183 DATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFF 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 233 PDmlGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALVISILILIIIPLLHTSKQRSMTFRPISQCL 310
Cdd:COG1290 263 PI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTAL 340
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 527468865 311 FWLLAADLLTLTWIGGQPVeyPYVIIGQLASVLYFSIIIVFMPLVGLME 359
Cdd:COG1290 341 GVAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
1-192 |
1.06e-95 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 283.10 E-value: 1.06e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 1 NDSFIDLPTPSSISAWWNFGSLLGICLALQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWVLRYLHANGASMFFICL 80
Cdd:cd00284 7 NNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLML 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 81 YLHVGRGLYYGSY--LYKETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDK 158
Cdd:cd00284 87 YLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDN 166
|
170 180 190
....*....|....*....|....*....|....
gi 527468865 159 ATLTRFFAFHFLLPFIISAMVMVHLLFLHETGSN 192
Cdd:cd00284 167 ATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
4-190 |
2.23e-87 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 261.55 E-value: 2.23e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 4 FIDLPTPSSISAWWNFGSLLGICLALQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWVLRYLHANGASMFFICLYLH 83
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 84 VGRGLYYG--SYLYKETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATL 161
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 527468865 162 TRFFAFHFLLPFIISAMVMVHLLFLHETG 190
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
215-277 |
5.49e-08 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 51.72 E-value: 5.49e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 527468865 215 ILGLFMMITillALVLFAPDMLGDPdnympANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGV 277
Cdd:TIGR01156 44 ILGTIACVV---GLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGV 98
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 721.42 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 1 NDSFIDLPTPSSISAWWNFGSLLGICLALQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWVLRYLHANGASMFFICL 80
Cdd:MTH00100 15 NHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICL 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 81 YLHVGRGLYYGSYLYKETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKAT 160
Cdd:MTH00100 95 FLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKAT 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 161 LTRFFAFHFLLPFIISAMVMVHLLFLHETGSNNPTGIPSNADMIPFHPYYTIKDILGLFMMITILLALVLFAPDMLGDPD 240
Cdd:MTH00100 175 LTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGDPD 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 241 NYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVISILILIIIPLLHTSKQRSMTFRPISQCLFWLLAADLLT 320
Cdd:MTH00100 255 NYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLT 334
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 527468865 321 LTWIGGQPVEYPYVIIGQLASVLYFSIIIVFMPLVGLMENHLLKW 365
Cdd:MTH00100 335 LTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLLKW 379
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 660.06 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 1 NDSFIDLPTPSSISAWWNFGSLLGICLALQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWVLRYLHANGASMFFICL 80
Cdd:MTH00119 16 NNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFICI 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 81 YLHVGRGLYYGSYLYKETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKAT 160
Cdd:MTH00119 96 YLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNPT 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 161 LTRFFAFHFLLPFIISAMVMVHLLFLHETGSNNPTGIPSNADMIPFHPYYTIKDILGLFMMITILLALVLFAPDMLGDPD 240
Cdd:MTH00119 176 LTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDPE 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 241 NYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVISILILIIIPLLHTSKQRSMTFRPISQCLFWLLAADLLT 320
Cdd:MTH00119 256 NFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVANLLI 335
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 527468865 321 LTWIGGQPVEYPYVIIGQLASVLYFSIIIVFMPLVGLMENHLLKW 365
Cdd:MTH00119 336 LTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGALENKMLNY 380
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 645.55 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 1 NDSFIDLPTPSSISAWWNFGSLLGICLALQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWVLRYLHANGASMFFICL 80
Cdd:MTH00131 15 NDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFFICI 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 81 YLHVGRGLYYGSYLYKETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKAT 160
Cdd:MTH00131 95 YLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNAT 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 161 LTRFFAFHFLLPFIISAMVMVHLLFLHETGSNNPTGIPSNADMIPFHPYYTIKDILGLFMMITILLALVLFAPDMLGDPD 240
Cdd:MTH00131 175 LTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSPNLLGDPD 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 241 NYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVISILILIIIPLLHTSKQRSMTFRPISQCLFWLLAADLLT 320
Cdd:MTH00131 255 NFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWTLVADVLI 334
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 527468865 321 LTWIGGQPVEYPYVIIGQLASVLYFSIIIVFMPLVGLMENHLLKW 365
Cdd:MTH00131 335 LTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLENKALEW 379
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-365 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 629.40 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 1 NDSFIDLPTPSSISAWWNFGSLLGICLALQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWVLRYLHANGASMFFICL 80
Cdd:MTH00074 16 NNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANGASFFFICI 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 81 YLHVGRGLYYGSYLYKETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKAT 160
Cdd:MTH00074 96 YLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGFSVDKAT 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 161 LTRFFAFHFLLPFIISAMVMVHLLFLHETGSNNPTGIPSNADMIPFHPYYTIKDILGLFMMITILLALVLFAPDMLGDPD 240
Cdd:MTH00074 176 LTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFSPNLLGDPD 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 241 NYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVISILILIIIPLLHTSKQRSMTFRPISQCLFWLLAADLLT 320
Cdd:MTH00074 256 NFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPLTQILFWLLVANTLI 335
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 527468865 321 LTWIGGQPVEYPYVIIGQLASVLYFSIIIVFMPLVGLMENHLLKW 365
Cdd:MTH00074 336 LTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLENKLLKW 380
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
1-354 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 600.75 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 1 NDSFIDLPTPSSISAWWNFGSLLGICLALQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWVLRYLHANGASMFFICL 80
Cdd:MTH00191 12 NGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANGASFFFICI 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 81 YLHVGRGLYYGSYLYKETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKAT 160
Cdd:MTH00191 92 YLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGGFSVDNAT 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 161 LTRFFAFHFLLPFIISAMVMVHLLFLHETGSNNPTGIPSNADMIPFHPYYTIKDILGLFMMITILLALVLFAPDMLGDPD 240
Cdd:MTH00191 172 LTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFSPNLLGDPE 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 241 NYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVISILILIIIPLLHTSKQRSMTFRPISQCLFWLLAADLLT 320
Cdd:MTH00191 252 NFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVVFWLWVANFIL 331
|
330 340 350
....*....|....*....|....*....|....
gi 527468865 321 LTWIGGQPVEYPYVIIGQLASVLYFSIIIVFMPL 354
Cdd:MTH00191 332 LTWLGGQPVEDPFILLGQISSFLYFFLFLLLFPL 365
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
1-352 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 593.30 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 1 NDSFIDLPTPSSISAWWNFGSLLGICLALQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWVLRYLHANGASMFFICL 80
Cdd:MTH00156 5 NNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFFICI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 81 YLHVGRGLYYGSYLYKETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKAT 160
Cdd:MTH00156 85 YLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVDNAT 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 161 LTRFFAFHFLLPFIISAMVMVHLLFLHETGSNNPTGIPSNADMIPFHPYYTIKDILGLFMMITILLALVLFAPDMLGDPD 240
Cdd:MTH00156 165 LTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLGDPE 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 241 NYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVISILILIIIPLLHTSKQRSMTFRPISQCLFWLLAADLLT 320
Cdd:MTH00156 245 NFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVNIVIL 324
|
330 340 350
....*....|....*....|....*....|..
gi 527468865 321 LTWIGGQPVEYPYVIIGQLASVLYFSIIIVFM 352
Cdd:MTH00156 325 LTWIGARPVEEPYILTGQILTILYFLYFIINP 356
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
1-363 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 569.34 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 1 NDSFIDLPTPSSISAWWNFGSLLGICLALQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWVLRYLHANGASMFFICL 80
Cdd:MTH00034 15 NSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANGASLFFICL 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 81 YLHVGRGLYYGSYLYKETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKAT 160
Cdd:MTH00034 95 YFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGFSVDNAT 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 161 LTRFFAFHFLLPFIISAMVMVHLLFLHETGSNNPTGIPSNADMIPFHPYYTIKDILGLFMMITILLALVLFAPDMLGDPD 240
Cdd:MTH00034 175 LTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLFPTALNDPE 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 241 NYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVISILILIIIPLLHTSKQRSMTFRPISQCLFWLLAADLLT 320
Cdd:MTH00034 255 NFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQIAFWLLIATFFI 334
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 527468865 321 LTWIGGQPVEYPYVIIGQLASVLYFSIIIVFMPLVGLMENHLL 363
Cdd:MTH00034 335 LTWIGSQPVEYPFILLGQVASVLYFSLFLFFFPLISYLENKLI 377
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-363 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 558.37 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 1 NDSFIDLPTPSSISAWWNFGSLLGICLALQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWVLRYLHANGASMFFICL 80
Cdd:MTH00145 16 NGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANGASFFFICI 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 81 YLHVGRGLYYGSYLYKETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKAT 160
Cdd:MTH00145 96 YLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFSVGNAT 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 161 LTRFFAFHFLLPFIISAMVMVHLLFLHETGSNNPTGIPSNADMIPFHPYYTIKDILGLFMMITILLALVLFAPDMLGDPD 240
Cdd:MTH00145 176 LKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFFPNLLGDPE 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 241 NYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVISILILIIIPLLHTSKQRSMTFRPISQCLFWLLAADLLT 320
Cdd:MTH00145 256 NFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQVLFWIFVGNFFI 335
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 527468865 321 LTWIGGQPVEYPYVIIGQLASVLYFSIIIVfMPLVGLMENHLL 363
Cdd:MTH00145 336 LTWIGACPVEEPYETIGQVFTVLYFLFFLI-LPLVQKLWDNIL 377
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-364 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 540.42 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 1 NDSFIDLPTPSSISAWWNFGSLLGICLALQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWVLRYLHANGASMFFICL 80
Cdd:MTH00016 16 NGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHANGASFFFICL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 81 YLHVGRGLYYGSYLYKETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKAT 160
Cdd:MTH00016 96 YLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGFSVDNAT 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 161 LTRFFAFHFLLPFIISAMVMVHLLFLHETGSNNPTGIPSNADMIPFHPYYTIKDILGLFMMITILLALVLFAPDMLGDPD 240
Cdd:MTH00016 176 LTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLWPNILGDPE 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 241 NYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVISILILIIIPLLHTSKQRSMTFRPISQCLFWLLAADLLT 320
Cdd:MTH00016 256 NFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQILFWLLVSNFLL 335
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 527468865 321 LTWIGGQPVEYPYVIIGQLASVLYFSIIIvFMPLVGLMENHLLK 364
Cdd:MTH00016 336 LTWIGGRPVEPPYEFLGQIFTVFYFFYFM-INPLLMKLWDKLLK 378
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
1-364 |
5.13e-173 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 486.52 E-value: 5.13e-173
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 1 NDSFIDLPTPSSISAWWNFGSLLGICLALQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWVLRYLHANGASMFFICL 80
Cdd:MTH00022 14 NGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHANGASLFFLCL 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 81 YLHVGRGLYYGSYLYKETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKAT 160
Cdd:MTH00022 94 YIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGFSVSNAT 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 161 LTRFFAFHFLLPFIISAMVMVHLLFLHETGSNNPTGIPSNADMIPFHPYYTIKDILGLFMMITILLALVLFAPDMLGDPD 240
Cdd:MTH00022 174 LNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAPNLLGDPE 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 241 NYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVISILILIIIPLLHTSKQRSMTFRPISQCLFWLLAADLLT 320
Cdd:MTH00022 254 NFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRMAFWFLIVDFIL 333
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 527468865 321 LTWIGGQPVEYPYVIIGQLASVLYFSIIIVFMPLVGLMENHLLK 364
Cdd:MTH00022 334 LTWIGSQVVEEPFILIGQLLSFFYFFYFLVLIPLLGELENQLLF 377
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-364 |
8.64e-172 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 483.44 E-value: 8.64e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 1 NDSFIDLPTPSSISAWWNFGSLLGICLALQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWVLRYLHANGASMFFICL 80
Cdd:MTH00053 16 NSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHANGASMFFLCV 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 81 YLHVGRGLYYGSYLYKETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKAT 160
Cdd:MTH00053 96 YFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGFSVSNAT 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 161 LTRFFAFHFLLPFIISAMVMVHLLFLHETGSNNPTGIPSNADMIPFHPYYTIKDILGLFMMITILLALVLFAPDMLGDPD 240
Cdd:MTH00053 176 LNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLFPYSLGDAE 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 241 NYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVISILILIIIPLLHTSKQRSMTFRPISQCLFWLLAADLLT 320
Cdd:MTH00053 256 NFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKILFWFLVGDFFL 335
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 527468865 321 LTWIGGQPVEYPYVIIGQLASVLYFSIIIVFMPLVGLMENHLLK 364
Cdd:MTH00053 336 LTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLENKLLK 379
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-364 |
2.30e-165 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 467.09 E-value: 2.30e-165
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 1 NDSFIDLPTPSSISAWWNFGSLLGICLALQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWVLRYLHANGASMFFICL 80
Cdd:MTH00224 16 NGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHANGASMFFLFI 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 81 YLHVGRGLYYGSYLYKETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKAT 160
Cdd:MTH00224 96 YLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGFAVDNAT 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 161 LTRFFAFHFLLPFIISAMVMVHLLFLHETGSNNPTGIPSNADMIPFHPYYTIKDILGLFMMITILLALVLFAPDMLGDPD 240
Cdd:MTH00224 176 LNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFEPNLFTDPE 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 241 NYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVISILILIIIPLLHTSKQRSMTFRPISQCLFWLLAADLLT 320
Cdd:MTH00224 256 NFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQLLFWLLVTSWAI 335
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 527468865 321 LTWIGGQPVEYPYVIIGQLASVLYFSIIIVfMPLVGLMENHLLK 364
Cdd:MTH00224 336 LTWIGGRPVEDPFEGIGQVFTILYFSYFII-SPAISKLWDDLLN 378
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
2-360 |
9.15e-133 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 384.29 E-value: 9.15e-133
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 2 DSFIDLPTPSSISAWWNFGSLLGICLALQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWVLRYLHANGASMFFICLY 81
Cdd:MTH00033 13 NDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVY 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 82 LHVGRGLYYGSYLYKETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATL 161
Cdd:MTH00033 93 CHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTL 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 162 TRFFAFHFLLPFIISAMVMVHLLFLHETGSNNPTGIPSNADMIPFHPYYTIKDILGlFMMITILLALVLFAP---DMLGD 238
Cdd:MTH00033 173 NRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILG-FLILFGVFVIIGIEPrieTLLQD 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 239 PDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVISILILIIIPLLHTSKQRSMTFRPISQCLFWLLAADL 318
Cdd:MTH00033 252 PENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDF 331
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 527468865 319 LTLTWIGGQPV-EYPYVIIGQLASVLYFSIIIVFMPLVGLMEN 360
Cdd:MTH00033 332 IILTWIGSAPAgADPYVLIGRIATIFYFGYFLVLVPLLGYLSN 374
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
2-359 |
3.11e-124 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 362.96 E-value: 3.11e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 2 DSFIDLPTPSSISAWWNFGSLLGICLALQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWVLRYLHANGASMFFICLY 81
Cdd:COG1290 25 REHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVY 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 82 LHVGRGLYYGSylYKE----TWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVD 157
Cdd:COG1290 105 LHMFRGFFYGA--YKKprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPG 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 158 KATLTRFFAFH-FLLPFIISAMVMVHLLFLHETGSNNPTGI----PSNADMIPFHPYYTIKDILGLFMMITILLALVLFA 232
Cdd:COG1290 183 DATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFF 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 233 PDmlGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALVISILILIIIPLLHTSKQRSMTFRPISQCL 310
Cdd:COG1290 263 PI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRPVRTAL 340
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 527468865 311 FWLLAADLLTLTWIGGQPVeyPYVIIGQLASVLYFSIIIVFMPLVGLME 359
Cdd:COG1290 341 GVAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
5-352 |
3.05e-115 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 338.84 E-value: 3.05e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 5 IDLPTPSSISAWWNFGSLLGICLALQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWVLRYLHANGASMFFICLYLHV 84
Cdd:MTH00086 8 VTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFLYLHI 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 85 GRGLYYGSYLYKETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRF 164
Cdd:MTH00086 88 FKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSATLKFF 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 165 FAFHFLLPFIISAMVMVHLLFLHETGSNNPTGIPSNADMIPFHPYYTIKDILGLFMMItILLALVLFAPDMLGDPDNYMP 244
Cdd:MTH00086 168 FVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNIIFWL-VFIIFSLFYPFNLGDPEMFIE 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 245 ANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVISILILIIIPLLHTSkqrSMTFRPISQCLFWLLAADLLTLTWI 324
Cdd:MTH00086 247 ADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNY---TSCLNKLNKFLVFSFIVVNVILSWL 323
|
330 340
....*....|....*....|....*...
gi 527468865 325 GGQPVEYPYVIIGQLASVLYFSIIIVFM 352
Cdd:MTH00086 324 GQCLVEYPFLFLSQIFSFIYFFLILLML 351
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
1-192 |
1.06e-95 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 283.10 E-value: 1.06e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 1 NDSFIDLPTPSSISAWWNFGSLLGICLALQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWVLRYLHANGASMFFICL 80
Cdd:cd00284 7 NNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLML 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 81 YLHVGRGLYYGSY--LYKETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDK 158
Cdd:cd00284 87 YLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDN 166
|
170 180 190
....*....|....*....|....*....|....
gi 527468865 159 ATLTRFFAFHFLLPFIISAMVMVHLLFLHETGSN 192
Cdd:cd00284 167 ATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
5-351 |
5.97e-91 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 276.86 E-value: 5.97e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 5 IDLPTPSSISAWWNFGSLLGICLALQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWVLRYLHANGASMFFICLYLHV 84
Cdd:MTH00046 10 IDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFILLFIHM 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 85 GRGLYYGSYLYKETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRF 164
Cdd:MTH00046 90 GRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGVTLVRV 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 165 FAFHFLLPFIISAMVMVHLLFLHETGSNNPTGIPSN-ADMIPFHPYYTIKDILGLFMMITILLALVLFAPDMLGDPDNYM 243
Cdd:MTH00046 170 FSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGySDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVLDIEAYL 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 244 PANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVISILILIIipllhTSKQRSMTFRPISQCLFWLLAADLLTLTW 323
Cdd:MTH00046 250 EADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGLVLVLSFLFFLWV-----PTFNGSSVYSVWRQVNFWLIVSLFFSLSY 324
|
330 340
....*....|....*....|....*...
gi 527468865 324 IGGQPVEYPYVIIGQLASVLYFSIIIVF 351
Cdd:MTH00046 325 LGGCHPEYPYLLISQLFSVLMVLLLFIF 352
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
4-190 |
2.23e-87 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 261.55 E-value: 2.23e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 4 FIDLPTPSSISAWWNFGSLLGICLALQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWVLRYLHANGASMFFICLYLH 83
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 84 VGRGLYYG--SYLYKETWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATL 161
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 527468865 162 TRFFAFHFLLPFIISAMVMVHLLFLHETG 190
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
74-239 |
5.64e-48 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 160.10 E-value: 5.64e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 74 SMFFICLYLHVGRGLYYGSYLYKE--TWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIW 151
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 152 GGFSVDKATLTRFFAFHF-LLPFIISAMVMVHLLFLHETGSNNPTGIPSNADMIPFHPYYTIKDILGLFMMITILLALVL 230
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 527468865 231 FAPDMLGDP 239
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
193-340 |
8.55e-44 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 148.18 E-value: 8.55e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 193 NPTGIPSNADMIPFHPYYTIKDILGLFMMITILLALVLFAPDMLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPN 272
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 527468865 273 KLGGVLALVISILILIIIPLLHTSKQRSmTFRPISQCLFWLLAADLLTLTWIGGQPVEYPYVIIGQLA 340
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
19-194 |
7.96e-39 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 137.92 E-value: 7.96e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 19 FGSLLGICLALQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWVLRYLHANGASMFFICLYLHVGRGLYYGSYLYKE- 97
Cdd:PRK03735 44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 98 -TWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFH-FLLPFII 175
Cdd:PRK03735 124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203
|
170
....*....|....*....
gi 527468865 176 SAMVMVHLLFLHETGSNNP 194
Cdd:PRK03735 204 AVLMLAHFLMIRKQGISGP 222
|
|
| petB |
CHL00070 |
cytochrome b6 |
10-194 |
2.21e-32 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 120.60 E-value: 2.21e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 10 PSSISAWWNFGSLLGICLALQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWVLRYLHANGASMFFICLYLHVGRGLY 89
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 90 YGSYLYKE--TWNVGVILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAF 167
Cdd:CHL00070 107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170 180
....*....|....*....|....*...
gi 527468865 168 H-FLLPFIISAMVMVHLLFLHETGSNNP 194
Cdd:CHL00070 187 HtFVLPLLTAVFMLMHFLMIRKQGISGP 214
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
244-344 |
1.28e-31 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 114.88 E-value: 1.28e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 244 PANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVISILILIIIPLLHTSKQRSMTFRPISQCLFWLLAADLLTLTW 323
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 527468865 324 IGGQPVEYPYVIIGQLASVLY 344
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
194-277 |
1.91e-09 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 55.96 E-value: 1.91e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 527468865 194 PTGIPSNADMIPFHPyytiKDILGLFMM-----ITILLALVLFAPDMLGDPdnympANPLSTPPHIKPEWYFLFAYAILR 268
Cdd:COG5679 20 EKGMGHNYYGEPAWP----NDLLYIFPVvilgtIALCIGLAVLDPAMMGEP-----ADPFATPLEILPEWYLYPVFQILR 90
|
....*....
gi 527468865 269 SIPNKLGGV 277
Cdd:COG5679 91 VVPNKLLGI 99
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
215-277 |
3.24e-09 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 55.39 E-value: 3.24e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 527468865 215 ILGLFmmiTILLALVLFAPDMLGDPdnympANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGV 277
Cdd:CHL00058 44 ILGTI---ACNVGLAVLEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGV 98
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
215-277 |
5.49e-08 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 51.72 E-value: 5.49e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 527468865 215 ILGLFMMITillALVLFAPDMLGDPdnympANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGV 277
Cdd:TIGR01156 44 ILGTIACVV---GLAVLDPAMIGEP-----ANPFATPLEILPEWYFYPVFQILRTVPNKLLGV 98
|
|
| |
