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Conserved domains on  [gi|687814719|gb|AIQ81015|]
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ATP synthase subunit 6 (mitochondrion) [Scirtothrips dorsalis]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-211 9.53e-64

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 196.93  E-value: 9.53e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719   1 MSFLSSEMNWFILQFFLILMFLSFWIKPSRISISKTVLLKYFAEQFEIALKTKKDGPKLLFLSIFLLIVLSNISGLIPNS 80
Cdd:MTH00157  12 STSFNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFILFNNFLGLFPYI 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719  81 FTATSHLTTNLFLSVPMWVGFFIFGWVTFTNKMLAHLVPNGTPTALISFMVLIELISTSIRPFTLSIRLMANMVSGHLLL 160
Cdd:MTH00157  92 FTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLAANMIAGHLLL 171

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 687814719 161 TLLGNSMVNISMFLLVVMVSVQTLLALLETGVCLIQAYVFCMLLTLYSDES 211
Cdd:MTH00157 172 TLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEV 222
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-211 9.53e-64

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 196.93  E-value: 9.53e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719   1 MSFLSSEMNWFILQFFLILMFLSFWIKPSRISISKTVLLKYFAEQFEIALKTKKDGPKLLFLSIFLLIVLSNISGLIPNS 80
Cdd:MTH00157  12 STSFNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFILFNNFLGLFPYI 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719  81 FTATSHLTTNLFLSVPMWVGFFIFGWVTFTNKMLAHLVPNGTPTALISFMVLIELISTSIRPFTLSIRLMANMVSGHLLL 160
Cdd:MTH00157  92 FTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLAANMIAGHLLL 171

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 687814719 161 TLLGNSMVNISMFLLVVMVSVQTLLALLETGVCLIQAYVFCMLLTLYSDES 211
Cdd:MTH00157 172 TLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEV 222
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 1-211 4.15e-41

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 139.26  E-value: 4.15e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719    1 MSFLSSEMNWFILQFFLILMFLSF----WIKPSRISISKTVLLKYFAEQFEIALKTKKDGPKLLFLSIFLLIVLSNISGL 76
Cdd:TIGR01131  10 ITLFSLTLLSLILLLSLLIFLISSslsrWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFILISNLLGL 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719   77 IPNSFTATSHLTTNLFLSVPMWVGFFIFGWVTFTNKMLAHLVPNGTPTALISFMVLIELISTSIRPFTLSIRLMANMVSG 156
Cdd:TIGR01131  90 IPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVRLFANISAG 169

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 687814719  157 HLLLTLLGN-SMVNISMFLLVVMVSVQTLLALLETGVCLIQAYVFCMLLTLYSDES 211
Cdd:TIGR01131 170 HLLLTLLSGlLFSLMSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDA 225
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 70-207 5.78e-39

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 131.37  E-value: 5.78e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719  70 LSNISGLIPNSFTATSHLTTNLFLSVPMWVGFFIFGWVTFTNKMLAHLVPNGTPTALISFMVLIELISTSIRPFTLSIRL 149
Cdd:cd00310   17 FSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISELIRPLSLSVRL 96

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 687814719 150 MANMVSGHLLLTLLGNSMVNISMFLLVVMVSVQTLLALLETGVCLIQAYVFCMLLTLY 207
Cdd:cd00310   97 FANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVY 154
ATP-synt_A pfam00119
ATP synthase A chain;
70-207 7.02e-25

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 96.79  E-value: 7.02e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719   70 LSNISGLI---PNSFTATSHLTTNLFLSVPMWVGFFIFGWVTF-TNKMLAHLVPNGTPTALISFMVLIELISTSIRPFTL 145
Cdd:pfam00119  70 VSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSL 149

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 687814719  146 SIRLMANMVSGHLLLTL---LGNSMVNISMFLLVVMVSVQTLLALLETGVCLIQAYVFCMLLTLY 207
Cdd:pfam00119 150 SLRLFGNMLAGHLLLLLlagLIFALLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVY 214
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 70-207 8.28e-20

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 83.58  E-value: 8.28e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719  70 LSNISGLIPNSFTATSHLTTNLFLSVPMWV-----GFFIFGWVTFTNKMLAHLVPngtptALISFMVLIELISTSIRPFT 144
Cdd:COG0356   70 VSNLLGLIPGLFPPTADINVTLALALIVFVlvhyyGIKKKGLGGYLKHLFFPPFP-----WLAPLMLPIEIISELARPLS 144

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 687814719 145 LSIRLMANMVSGHLLLTLLGNSMVNISMFLLVVMVSVqtLLALLETGVCLIQAYVFCMLLTLY 207
Cdd:COG0356  145 LSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLLPV--AWTAFELLVGFLQAYIFTMLTAVY 205
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-211 9.53e-64

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 196.93  E-value: 9.53e-64
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719   1 MSFLSSEMNWFILQFFLILMFLSFWIKPSRISISKTVLLKYFAEQFEIALKTKKDGPKLLFLSIFLLIVLSNISGLIPNS 80
Cdd:MTH00157  12 STSFNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFILFNNFLGLFPYI 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719  81 FTATSHLTTNLFLSVPMWVGFFIFGWVTFTNKMLAHLVPNGTPTALISFMVLIELISTSIRPFTLSIRLMANMVSGHLLL 160
Cdd:MTH00157  92 FTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLAANMIAGHLLL 171

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 687814719 161 TLLGNSMVNISMFLLVVMVSVQTLLALLETGVCLIQAYVFCMLLTLYSDES 211
Cdd:MTH00157 172 TLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEV 222
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 1-211 4.15e-41

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 139.26  E-value: 4.15e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719    1 MSFLSSEMNWFILQFFLILMFLSF----WIKPSRISISKTVLLKYFAEQFEIALKTKKDGPKLLFLSIFLLIVLSNISGL 76
Cdd:TIGR01131  10 ITLFSLTLLSLILLLSLLIFLISSslsrWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFILISNLLGL 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719   77 IPNSFTATSHLTTNLFLSVPMWVGFFIFGWVTFTNKMLAHLVPNGTPTALISFMVLIELISTSIRPFTLSIRLMANMVSG 156
Cdd:TIGR01131  90 IPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVRLFANISAG 169

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 687814719  157 HLLLTLLGN-SMVNISMFLLVVMVSVQTLLALLETGVCLIQAYVFCMLLTLYSDES 211
Cdd:TIGR01131 170 HLLLTLLSGlLFSLMSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDA 225
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 70-207 5.78e-39

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 131.37  E-value: 5.78e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719  70 LSNISGLIPNSFTATSHLTTNLFLSVPMWVGFFIFGWVTFTNKMLAHLVPNGTPTALISFMVLIELISTSIRPFTLSIRL 149
Cdd:cd00310   17 FSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISELIRPLSLSVRL 96

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 687814719 150 MANMVSGHLLLTLLGNSMVNISMFLLVVMVSVQTLLALLETGVCLIQAYVFCMLLTLY 207
Cdd:cd00310   97 FANMFAGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVY 154
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 1-210 2.25e-38

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 132.55  E-value: 2.25e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719   1 MSFLSSEMNWFILQFFLILMFLSFWIKPSRISISKTVLLKYFAEQFEIALKTKKDGPKLLFLSIFLLIVLSNISGLIPNS 80
Cdd:MTH00005  17 FNNLSSTAFWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFGKHLKGFSSLISALFTMIILMNLSGLLPYV 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719  81 FTATSHLTTNLFLSVPMWVGFFIFGWVTFTNKMLAHLVPNGTPTALISFMVLIELISTSIRPFTLSIRLMANMVSGHLLL 160
Cdd:MTH00005  97 FSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPITLSFRLAANMSAGHIVL 176

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 687814719 161 TLLG---NSMVNISMFLLVVMVSVQTLLALLETGVCLIQAYVFCMLLTLYSDE 210
Cdd:MTH00005 177 SLIGiyaASALFSSISSTILLILTQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 9-210 4.60e-38

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 131.69  E-value: 4.60e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719   9 NWFILQFFLILMFLSFWIKPSRISISKTVLLKYFAEQFEIALKTKKDGPKLLFLSIFLLIVLSNISGLIPNSFTATSHLT 88
Cdd:MTH00176  23 SWITLLLFLLLMPSSVWFCPSKLQVFMLMFSTFLPEMILRSNGSYILGSASIIISLFILVMSLNLSGLIPYVFTSTSHLV 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719  89 TNLFLSVPMWVGFFIFGWVTFTNKMLAHLVPNGTPTALISFMVLIELISTSIRPFTLSIRLMANMVSGHLLLTLLGNSMV 168
Cdd:MTH00176 103 ITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTLAVRLAANLSAGHLLLGLLGAAMW 182

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 687814719 169 NISMFLLVVMVS---VQTLLALLETGVCLIQAYVFCMLLTLYSDE 210
Cdd:MTH00176 183 GLLPVSPLIGFLlliVQILYFMFEIAVCMIQAYVFTLLLSLYLDE 227
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 1-211 2.98e-34

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 121.90  E-value: 2.98e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719   1 MSFLSSEMNWFILQFFLILMFLSFWIKPSRISISKTVLLKYFAEQFEIALKTKKDGPKLLFLSIFLLIVLSNISGLIPNS 80
Cdd:MTH00173  15 SFSSLSFLMWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSGLNLGGFSLLLSSLFLFLISLNLSGLLPFV 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719  81 FTATSHLTTNLFLSVPMWVGFFIFGWVTFTNKMLAHLVPNGTPTALISFMVLIELISTSIRPFTLSIRLMANMVSGHLLL 160
Cdd:MTH00173  95 FSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLTVRLLANISAGHIVL 174

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 687814719 161 TLLGN----SMVNISMFLLVVMVSVQTLLALLETGVCLIQAYVFCMLLTLYSDES 211
Cdd:MTH00173 175 TLIGNylssSLFSSSVVSLLLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDEH 229
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 11-210 2.82e-32

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 116.59  E-value: 2.82e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719  11 FILQFFLILMFLSFWIKpSRISISKTVLLKYFAEQFEIALKTKKDGPKLLFLSIFLLIVLSNISGLIPNSFTATSHLTTN 90
Cdd:MTH00179  24 LLLPWLLFPSLTNRWLN-NRLSTLQSWFFGSFTFQLMQPINKKGHKWAVLFLSLMLFLLTLNLLGLLPYTFTPTTQLSLN 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719  91 LFLSVPMWVGFFIFGWVTFTNKMLAHLVPNGTPTALISFMVLIELISTSIRPFTLSIRLMANMVSGHLLLTLLGN---SM 167
Cdd:MTH00179 103 LGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGVRLTANITAGHLLMHLISSavfVL 182

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|...
gi 687814719 168 VNISMFLLVVMVSVQTLLALLETGVCLIQAYVFCMLLTLYSDE 210
Cdd:MTH00179 183 MNFMGMVALLTLLVLFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 70-210 1.33e-31

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 114.92  E-value: 1.33e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719  70 LSNISGLIPNSFTATSHLTTNLFLSVPMWVGFFIFGWVTFTNKMLAHLVPNGTPTALISFMVLIELISTSIRPFTLSIRL 149
Cdd:MTH00120  82 LINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALGVRL 161

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 687814719 150 MANMVSGHLLLTLLGN---SMVNISMFLLVVMVSVQTLLALLETGVCLIQAYVFCMLLTLYSDE 210
Cdd:MTH00120 162 TANLTAGHLLIQLISTatlNLLPTMPTLSLLTLIILLLLTILELAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 70-207 4.05e-31

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 113.51  E-value: 4.05e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719  70 LSNISGLIPNSFTATSHLTTNLFLSVPMWVGFFIFGWVTFTNKMLAHLVPNGTPTALISFMVLIELISTSIRPFTLSIRL 149
Cdd:MTH00101  81 STNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVRL 160

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 687814719 150 MANMVSGHLLLTLLGNS---MVNISMFLLVVMVSVQTLLALLETGVCLIQAYVFCMLLTLY 207
Cdd:MTH00101 161 TANITAGHLLIHLIGGAtlaLMSISTTTALITFIILILLTILEFAVALIQAYVFTLLVSLY 221
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 72-211 2.73e-28

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 106.11  E-value: 2.73e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719  72 NISGLIPNSFTATSHLTTNLFLSVPMWVGFFIFGWVTFTNKMLAHLVPNGTPTALISFMVLIELISTSIRPFTLSIRLMA 151
Cdd:MTH00132  84 NMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLFIRPLALGVRLTA 163

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 687814719 152 NMVSGHLLLTLLgnSMVNISMFLLVVMVSVQT-----LLALLETGVCLIQAYVFCMLLTLYSDES 211
Cdd:MTH00132 164 NLTAGHLLIQLI--ATAAFVLLPLMPTVAILTatllfLLTLLEVAVAMIQAYVFVLLLSLYLQEN 226
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 29-210 6.45e-27

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 102.74  E-value: 6.45e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719  29 SRISISKTVLLKYFAEQFEIALKTKKDGPKLLFLSIFLLIVLSNISGLIPNSFTATSHLTTNLFLSVPMWVGFFIFGWVT 108
Cdd:MTH00073  41 NRLSTLQIWFLQNFTKQLMLPLNTPGHKWALILTSLMVFLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRN 120

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719 109 FTNKMLAHLVPNGTPTALISFMVLIELISTSIRPFTLSIRLMANMVSGHLLLTLLgnSMVNISMFLLVVMVSVQT----- 183
Cdd:MTH00073 121 QPTASLGHLLPEGTPTLLIPILIIIETISLFIRPLALGVRLTANLTAGHLLIQLI--STATLVLLPLMPTVSILTmivlf 198

                        170       180
                 ....*....|....*....|....*..
gi 687814719 184 LLALLETGVCLIQAYVFCMLLTLYSDE 210
Cdd:MTH00073 199 LLTLLEIAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 72-210 1.71e-26

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 101.59  E-value: 1.71e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719  72 NISGLIPNSFTATSHLTTNLFLSVPMWVGFFIFGWVTFTNKMLAHLVPNGTPTALISFMVLIELISTSIRPFTLSIRLMA 151
Cdd:MTH00035  87 NVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIALGLRLAA 166

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 687814719 152 NMVSGHLLLTLLGNSMVNISMFLLV--VMVSVQTLLALLETGVCLIQAYVFCMLLTLYSDE 210
Cdd:MTH00035 167 NLTAGHLLIFLLSTAIWELSNSPLIsiITLIIFFLLFILEIGVACIQAYVFTALVHFYLEQ 227
ATP-synt_A pfam00119
ATP synthase A chain;
70-207 7.02e-25

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 96.79  E-value: 7.02e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719   70 LSNISGLI---PNSFTATSHLTTNLFLSVPMWVGFFIFGWVTF-TNKMLAHLVPNGTPTALISFMVLIELISTSIRPFTL 145
Cdd:pfam00119  70 VSNLLGLIpksPGGFTVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSL 149

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 687814719  146 SIRLMANMVSGHLLLTL---LGNSMVNISMFLLVVMVSVQTLLALLETGVCLIQAYVFCMLLTLY 207
Cdd:pfam00119 150 SLRLFGNMLAGHLLLLLlagLIFALLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVY 214
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 72-207 1.97e-20

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 85.48  E-value: 1.97e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719  72 NISGLIPNSFTATSHLTTNLFLSVPMWVGFFIFGWVTFTNKMLAHLVPNGTPTALISFMVLIELISTSIRPFTLSIRLMA 151
Cdd:MTH00172  86 NLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAA 165

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 687814719 152 NMVSGHLLLTLL---GNSMVNISMFLLVVMVSVQTLLALLETGVCLIQAYVFCMLLTLY 207
Cdd:MTH00172 166 NLSAGHLLFAILagfGFNMLCASGFLSLFPLLIMVFITLLEIAVAVIQAYVFCLLTTIY 224
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 69-207 2.65e-20

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 85.44  E-value: 2.65e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719  69 VLSNISGLIPNSFTATSHLTTNLFLSVPMWVGFFIFGWVTFTNKMLAHLVPNGTPTALISFMVLIELISTSIRPFTLSIR 148
Cdd:MTH00175  94 AILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIRAISLGVR 173

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 687814719 149 LMANMVSGHLLLTLLG----NSMVNISMFLLVVMVSVQTLLALLETGVCLIQAYVFCMLLTLY 207
Cdd:MTH00175 174 LAANISAGHLLFAILSgfafNMLSNGLIILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIY 236
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 70-207 8.28e-20

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 83.58  E-value: 8.28e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719  70 LSNISGLIPNSFTATSHLTTNLFLSVPMWV-----GFFIFGWVTFTNKMLAHLVPngtptALISFMVLIELISTSIRPFT 144
Cdd:COG0356   70 VSNLLGLIPGLFPPTADINVTLALALIVFVlvhyyGIKKKGLGGYLKHLFFPPFP-----WLAPLMLPIEIISELARPLS 144

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 687814719 145 LSIRLMANMVSGHLLLTLLGNSMVNISMFLLVVMVSVqtLLALLETGVCLIQAYVFCMLLTLY 207
Cdd:COG0356  145 LSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLLPV--AWTAFELLVGFLQAYIFTMLTAVY 205
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 70-207 1.04e-16

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 75.60  E-value: 1.04e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719  70 LSNISGLIPN-SFTATSHLTTNLFLSVPMWVGFFIFG-WVTFTNKMLAHLVPNGTPtalisFMVLIELISTSIRPFTLSI 147
Cdd:PRK05815  85 LMNLLGLIPYlLFPPTADINVTLALALIVFVLVIYYGiKKKGLGGYLKEFYLQPHP-----LLLPIEIISEFSRPISLSL 159

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719 148 RLMANMVSGHLLLTLLGnSMVNISMFLLVVMVSVQTLLALLETGVCLIQAYVFCMLLTLY 207
Cdd:PRK05815 160 RLFGNMLAGELILALIA-LLGGAGLLLALAPLILPVAWTIFEIFVGTLQAYIFMMLTIVY 218
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 70-207 4.58e-15

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 72.47  E-value: 4.58e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719  70 LSNISGLIPNSFTATSHLTTNLFLSVpmwVGFFIFGWVTF----TNKMLAHLVpNGTPTALISFMVLIELISTSIRPFTL 145
Cdd:PRK13419 183 VCNLLGLVPYGATATGNINVTLTLAV---FTFFITQYAAIkahgIKGYLAHLT-GGTHWSLWIIMIPIEFIGLFTKPFAL 258

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 687814719 146 SIRLMANMVSGHL-LLTLLGNSMVNISMFLLVVM-VSVQTLLALLETGVCLIQAYVFCMLLTLY 207
Cdd:PRK13419 259 TVRLFANMTAGHIvILSLIFISFILKSYIVAVAVsVPFAIFIYLLELFVAFLQAYIFTMLSALF 322
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 9-207 3.63e-11

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 60.72  E-value: 3.63e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719   9 NWFILQFFLILMFLSFWIK-------PSRISISKTVLLKYFAEQFEIALKTKKDGPKLLFLSIFLLIVLSNISGLIPNSF 81
Cdd:MTH00174  35 NTFFMMSFAVFLFYTIGAKgnnntlvPNRILVGLELIYSHFYTVLKDNLGNKGGNYLAFVLSLFILILFGNGLGLFPYVF 114

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719  82 TATSHLTTNLFLSVPMWVGFFIFGWVTFTNKMLAHLVPNGTPTALISFMVLIELISTSIRPFTLSIRLMANMVSGHLLLT 161
Cdd:MTH00174 115 TPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISRAISLGVRLAANISSGHLLFS 194

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 687814719 162 LLGN---SMVNISMFL-LVVMVSVQTLLALLETGVCLIQAYVFCMLLTLY 207
Cdd:MTH00174 195 IIASfawKMINTGILIgSFVPFAILIFVTILEMAVAIIQAYVFTLLTIVY 244
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 112-207 6.70e-09

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 54.90  E-value: 6.70e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719 112 KMLAHLVPNGTPTALISFMVLIELISTSI-RPFTLSIRLMANMVSGH-LLLTLLGNSMVNISMFLLVVMVSVQTLLALLE 189
Cdd:PRK13417 247 KFIWHSVPNGVPLLLYPIMWPLEFIVSPMaKTFALTVRLLANMTAGHvIILALMGFIFQFQSWGIVPVSVIGSGLIYVLE 326

                         90
                 ....*....|....*...
gi 687814719 190 TGVCLIQAYVFCMLLTLY 207
Cdd:PRK13417 327 IFVAFLQAYIFVLLTSLF 344
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 69-210 2.09e-06

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 46.51  E-value: 2.09e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719  69 VLSNISGLIPNSFTATSHLTTNLFLSVPMWVGFFIFgwVTFTNKMLAHLVPNGTPTALISF-MVLIELISTSIRPFTLSI 147
Cdd:MTH00087  63 LLFCFGGLFPYSFSPCGMVEFTFLYALVAWLSTFLS--FLSKSEKFSVYLSKGSDSFLKTFsMLFVEIVSELSRPLALTL 140

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 687814719 148 RLMANMVSGHLLLTLLgNSMVNISMFLLVVMVsvqtllaLLETGVCLIQAYVFCMLLTLYSDE 210
Cdd:MTH00087 141 RLTVNLMVGHLISSLL-NFLGEKYVWLSILAI-------MMECFVAFIQSYIFSRLIYLYLNE 195
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 70-207 3.18e-03

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 37.41  E-value: 3.18e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719  70 LSNISGLIPN------SFTATSHLTTNLFLSVPmWVGFFIFGWvtfTNKMLAHLVPNgtptaliSFMVLIELISTSIRPF 143
Cdd:PRK13420  87 VANLIGLIPGfhsptaDLSVTAALALLVFFSVH-WFGIRAEGL---REYLKHYLSPS-------PFLLPFHLISEITRTL 155

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 687814719 144 TLSIRLMANMVS---GHLLLTLLGNSMVNISMFLLVVMVSvqtllalletgvcLIQAYVFCMLLTLY 207
Cdd:PRK13420 156 ALAVRLFGNIMSlelAALLVLLVAGFLVPVPILMLHIIEA-------------LVQAYIFGMLALIY 209
PRK13421 PRK13421
F0F1 ATP synthase subunit A; Provisional
 69-203 4.70e-03

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237383  Cd Length: 223  Bit Score: 36.98  E-value: 4.70e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 687814719  69 VLSNISGLIPNSFTATSHLTTNLFLSVPMWVGFFIFGwvTFTNKMLAHLVPNGTPTALisfMVLIELISTSIRPFTLSIR 148
Cdd:PRK13421  89 LVANWSSLVPGVEPPTAHLETDAALALIVFLATIYYG--VRARGVRGYLATFAEPTWV---MIPLNLVEQLTRTFSLIVR 163

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 687814719 149 LMANMVSGHLLLTLLgnsmvnISMFLLVVMVSvqtLLAL-LETGvcLIQAYVFCML 203
Cdd:PRK13421 164 LFGNVMSGVFVIGIV------LSLAGLLVPIP---LMALdLLTG--AVQAYIFAVL 208
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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