|
Name |
Accession |
Description |
Interval |
E-value |
| PRK15029 |
PRK15029 |
arginine decarboxylase; Provisional |
1-755 |
0e+00 |
|
arginine decarboxylase; Provisional
Pssm-ID: 184989 [Multi-domain] Cd Length: 755 Bit Score: 1648.04 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 1 MKVLIVESEFLHQDTWVGNAVERLADALSQQNVTVIKSTSFDDGFAILSSNEAIDCLMFSYQMEHPDEHQNVRQLIGKLH 80
Cdd:PRK15029 1 MKVLIVESEFLHQDTWVGNAVERLADALSQQNVTVIKSTSFDDGFAILSSNEAIDCLMFSYQMEHPDEHQNVRQLIGKLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 81 ERQQNVPVFLLGDREKALAAMDRDLLELVDEFAWILEDTADFIAGRAVAAMTRYRQQLLPPLFSALMKYSDIHEYSWAAP 160
Cdd:PRK15029 81 ERQQNVPVFLLGDREKALAAMDRDLLELVDEFAWILEDTADFIAGRAVAAMTRYRQQLLPPLFSALMKYSDIHEYSWAAP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 161 GHQGGVGFTKTPAGRFYHDYYGENLFRTDMGIERTSLGSLLDHTGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQA 240
Cdd:PRK15029 161 GHQGGVGFTKTPAGRFYHDYYGENLFRTDMGIERTSLGSLLDHTGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQA 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 241 CMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTN 320
Cdd:PRK15029 241 CMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTN 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 321 CTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVR 400
Cdd:PRK15029 321 CTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVR 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 401 EGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWN 480
Cdd:PRK15029 401 EGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWN 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 481 KEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVT 560
Cdd:PRK15029 481 KEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDLPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVT 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 561 AWLGRHGIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLCSFKRHYDANTPLAQVMPELVEQYPDTYANMGIHDLGDTMFA 640
Cdd:PRK15029 561 AWLGRHGIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLCSFKRHYDANTPLAQVMPELVEQYPDTYANMGIHDLGDTMFA 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 641 WLKENNPGARLNEAYSGLPVAEVTPREAYNAIVDNNVELVSIENLPGRIAANSVIPYPPGIPMLLSGENFGDKNSPQVSY 720
Cdd:PRK15029 641 WLKENNPGARLNEAYSGLPVAEITPREAYNAIVDNNVELVSIENLPGRIAANSVIPYPPGIPMLLSGENFGDKNSPQVSY 720
|
730 740 750
....*....|....*....|....*....|....*
gi 1314862422 721 LRSLQSWDHHFPGFEHETEGTEIIDGIYHVMCVKA 755
Cdd:PRK15029 721 LRSLQSWDHHFPGFEHETEGTEIIDGIYHVMCVKA 755
|
|
| OKR_DC_1 |
pfam01276 |
Orn/Lys/Arg decarboxylase, major domain; |
140-590 |
0e+00 |
|
Orn/Lys/Arg decarboxylase, major domain;
Pssm-ID: 396025 [Multi-domain] Cd Length: 417 Bit Score: 681.15 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 140 PPLFSALMKYSDIHEYSWAAPGHQGGVGFTKTPAGRFYHDYYGENLFRTDMGIERTSLGSLLDHTGAFGESEKYAARVFG 219
Cdd:pfam01276 1 PPLYKALFKYVRRGNYTFHCPGHQGGAGFQKHPAGRFFYDFFGENLLRIDVCIEDVELGDLLDHEGAIKEAQKYAARVFG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 220 ADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKI 299
Cdd:pfam01276 81 ADKSYFVVNGTSGSNKTVGMAVCTPGDTILIDRNCHKSIHHALMLSGATPVYLEPSRNAYGIIGGIPLHEFQEETLKEAI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 300 SESPLTKDkagqkPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEpgDHNGPTVF 379
Cdd:pfam01276 161 AEVPDAKG-----PRLAVITNPTYDGVLYNAKEIVDTLHHLSDPILFDSAWVGYEQFIPIYADASPMGGE--NENGPGIF 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 380 ATHSTHKLLNALSQASYIHVREGRGaINFSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQ 459
Cdd:pfam01276 234 VTQSVHKLLAALSQASYIHKKEGHI-VNHDRFNEAFMMHATTSPSYPIFASLDVAAKMLEGNSGRRLWNECVERAIEFRK 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 460 AMArlykefTADGSWFFKPWNKEVVTDPQtgktydfadaptkllttvqdCWVMHPGESWHGFKDIPDNWSMLDPIKVSIL 539
Cdd:pfam01276 313 AID------TLNNCEFFRPWNPEIVDGKE--------------------CWPFHPGETWHGFEGYADNQYFLDPCKLTIL 366
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 1314862422 540 APGMGEDGELEETGVPAALVTAWLGRHGIVPTRTTDFQIMFLFSMGVTRGK 590
Cdd:pfam01276 367 TPGMDEDGEYSEFGVPATIVAKWLRENGIVPEKTDLNNILFLFTPGEDRTK 417
|
|
| LdcC |
COG1982 |
Arginine/lysine/ornithine decarboxylase [Amino acid transport and metabolism]; |
134-754 |
0e+00 |
|
Arginine/lysine/ornithine decarboxylase [Amino acid transport and metabolism];
Pssm-ID: 441585 [Multi-domain] Cd Length: 486 Bit Score: 556.65 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 134 YRQQLLPPLFSALMKYSDIHEYSWAAPGHQGGVGFtktpaGRFYHDYYGENLFRTDMgIERTSLGSLLDHTGAFGESEKY 213
Cdd:COG1982 1 YMDQLLTPLFDALKKYAERGPVSFHVPGHKGGRGF-----GREFYDFFGENVFRLDL-TELPGLDDLHDPEGVIKEAQEL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 214 AARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPS-RNRYGIIGPIYpqemqP 292
Cdd:COG1982 75 AAEAFGADRTFFLVNGTSSGNKAMILAVCGPGDKVLVPRNCHKSVIHGLILSGAIPVYLNPEiDNELGIIGGIT-----P 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 293 ETLQKKISESPltkdkagqKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYAdHYAMRgepgd 372
Cdd:COG1982 150 EAVEEALIEHP--------DAKAVLITNPTYYGVCYDLKAIAELAHEHGIPVLVDEAHGAHFGFHPDLP-RSAME----- 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 373 hnGPTVFATHSTHKLLNALSQASYIHVREGRgaINFSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNsGLSLTQEVID 452
Cdd:COG1982 216 --AGADLVVQSTHKTLGALTQSSMLHVKGGR--VDHERVNEALMLLQSTSPSYLLMASLDVARRQMAGE-GEELLDEALE 290
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 453 EAVDFRQAMARLykeftadgsWFFKPWNKEVVTDPqtgktydfadaptkllttvqdcwvmhpgeswhgfkdipdNWSMLD 532
Cdd:COG1982 291 LAIEARKEINKI---------PGLYVFGPEDLGAP---------------------------------------GVYDLD 322
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 533 PIKVSILAPGMgedgeleetGVPAALVTAWLG-RHGIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLCSFKRHYDANTPL 611
Cdd:COG1982 323 PTKLTIDVPGL---------GISGYEVAEYLReEYGIQVELADLYNILFLLSLGDTKEDIERLVAALKELKRLYDKNAPL 393
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 612 AQVMPelveqypdtyanmgihdlgdtmfawlkennpgarlnEAYSGLPVAEVTPREAYNAivdnNVELVSIENLPGRIAA 691
Cdd:COG1982 394 EEVLP------------------------------------LAFPPLPELVMSPREAFFA----ETELVPLEEAVGRIAA 433
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1314862422 692 NSVIPYPPGIPMLLSGENFGDKNspqVSYLRSLQSWDHHFPGFEHETegteiidgIYHVMCVK 754
Cdd:COG1982 434 EMVIPYPPGIPLLMPGERITEEV---IDYLRALEEAGGRFPGFEDPE--------LRTIRVVK 485
|
|
| Orn_deC_like |
cd00615 |
Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent ... |
141-463 |
6.60e-135 |
|
Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Pssm-ID: 99739 [Multi-domain] Cd Length: 294 Bit Score: 400.47 E-value: 6.60e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 141 PLFSALMKYSDIHEYSWAAPGHQGGVGFTKTpagrfYHDYYGENLFRTDMGiERTSLGSLLDHTGAFGESEKYAARVFGA 220
Cdd:cd00615 1 PLFEALKEYAKRGIISFHVPGHKGGRGFRKS-----FYEFYGENLFKADVT-ELTGLDDLLDPTGPIKEAQELAARAFGA 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 221 DRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRN-RYGIIGPIYPQEMQPETlqkki 299
Cdd:cd00615 75 KHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERNpYYGIAGGIPPETFKKAL----- 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 300 sespltkdKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGepgdhngpTVF 379
Cdd:cd00615 150 --------IEHPDAKAAVITNPTYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMAG--------ADI 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 380 ATHSTHKLLNALSQASYIHVREGRgaINFSRFNQAYMMHATTSPLYAICASNDVAVSMMdGNSGLSLTQEVIDEAVDFRQ 459
Cdd:cd00615 214 VVQSTHKTLPALTQGSMIHVKGDL--VNPDRVNEALNLHQSTSPSYLILASLDVARAMM-ALEGKELVEELIELALYARQ 290
|
....
gi 1314862422 460 AMAR 463
Cdd:cd00615 291 EINK 294
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK15029 |
PRK15029 |
arginine decarboxylase; Provisional |
1-755 |
0e+00 |
|
arginine decarboxylase; Provisional
Pssm-ID: 184989 [Multi-domain] Cd Length: 755 Bit Score: 1648.04 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 1 MKVLIVESEFLHQDTWVGNAVERLADALSQQNVTVIKSTSFDDGFAILSSNEAIDCLMFSYQMEHPDEHQNVRQLIGKLH 80
Cdd:PRK15029 1 MKVLIVESEFLHQDTWVGNAVERLADALSQQNVTVIKSTSFDDGFAILSSNEAIDCLMFSYQMEHPDEHQNVRQLIGKLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 81 ERQQNVPVFLLGDREKALAAMDRDLLELVDEFAWILEDTADFIAGRAVAAMTRYRQQLLPPLFSALMKYSDIHEYSWAAP 160
Cdd:PRK15029 81 ERQQNVPVFLLGDREKALAAMDRDLLELVDEFAWILEDTADFIAGRAVAAMTRYRQQLLPPLFSALMKYSDIHEYSWAAP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 161 GHQGGVGFTKTPAGRFYHDYYGENLFRTDMGIERTSLGSLLDHTGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQA 240
Cdd:PRK15029 161 GHQGGVGFTKTPAGRFYHDYYGENLFRTDMGIERTSLGSLLDHTGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQA 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 241 CMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTN 320
Cdd:PRK15029 241 CMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTN 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 321 CTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVR 400
Cdd:PRK15029 321 CTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVR 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 401 EGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWN 480
Cdd:PRK15029 401 EGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWN 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 481 KEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVT 560
Cdd:PRK15029 481 KEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDLPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVT 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 561 AWLGRHGIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLCSFKRHYDANTPLAQVMPELVEQYPDTYANMGIHDLGDTMFA 640
Cdd:PRK15029 561 AWLGRHGIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLCSFKRHYDANTPLAQVMPELVEQYPDTYANMGIHDLGDTMFA 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 641 WLKENNPGARLNEAYSGLPVAEVTPREAYNAIVDNNVELVSIENLPGRIAANSVIPYPPGIPMLLSGENFGDKNSPQVSY 720
Cdd:PRK15029 641 WLKENNPGARLNEAYSGLPVAEITPREAYNAIVDNNVELVSIENLPGRIAANSVIPYPPGIPMLLSGENFGDKNSPQVSY 720
|
730 740 750
....*....|....*....|....*....|....*
gi 1314862422 721 LRSLQSWDHHFPGFEHETEGTEIIDGIYHVMCVKA 755
Cdd:PRK15029 721 LRSLQSWDHHFPGFEHETEGTEIIDGIYHVMCVKA 755
|
|
| OKR_DC_1 |
pfam01276 |
Orn/Lys/Arg decarboxylase, major domain; |
140-590 |
0e+00 |
|
Orn/Lys/Arg decarboxylase, major domain;
Pssm-ID: 396025 [Multi-domain] Cd Length: 417 Bit Score: 681.15 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 140 PPLFSALMKYSDIHEYSWAAPGHQGGVGFTKTPAGRFYHDYYGENLFRTDMGIERTSLGSLLDHTGAFGESEKYAARVFG 219
Cdd:pfam01276 1 PPLYKALFKYVRRGNYTFHCPGHQGGAGFQKHPAGRFFYDFFGENLLRIDVCIEDVELGDLLDHEGAIKEAQKYAARVFG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 220 ADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKI 299
Cdd:pfam01276 81 ADKSYFVVNGTSGSNKTVGMAVCTPGDTILIDRNCHKSIHHALMLSGATPVYLEPSRNAYGIIGGIPLHEFQEETLKEAI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 300 SESPLTKDkagqkPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEpgDHNGPTVF 379
Cdd:pfam01276 161 AEVPDAKG-----PRLAVITNPTYDGVLYNAKEIVDTLHHLSDPILFDSAWVGYEQFIPIYADASPMGGE--NENGPGIF 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 380 ATHSTHKLLNALSQASYIHVREGRGaINFSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQ 459
Cdd:pfam01276 234 VTQSVHKLLAALSQASYIHKKEGHI-VNHDRFNEAFMMHATTSPSYPIFASLDVAAKMLEGNSGRRLWNECVERAIEFRK 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 460 AMArlykefTADGSWFFKPWNKEVVTDPQtgktydfadaptkllttvqdCWVMHPGESWHGFKDIPDNWSMLDPIKVSIL 539
Cdd:pfam01276 313 AID------TLNNCEFFRPWNPEIVDGKE--------------------CWPFHPGETWHGFEGYADNQYFLDPCKLTIL 366
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 1314862422 540 APGMGEDGELEETGVPAALVTAWLGRHGIVPTRTTDFQIMFLFSMGVTRGK 590
Cdd:pfam01276 367 TPGMDEDGEYSEFGVPATIVAKWLRENGIVPEKTDLNNILFLFTPGEDRTK 417
|
|
| PRK15399 |
PRK15399 |
lysine decarboxylase; |
21-754 |
0e+00 |
|
lysine decarboxylase;
Pssm-ID: 185297 [Multi-domain] Cd Length: 713 Bit Score: 573.22 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 21 VERLADALSQQNVTVIKSTSFDDGFAILSSNEAIDCLMFSYqmehpDEHQNvrQLIGKLHERQQNVPVFLLGDREKALAA 100
Cdd:PRK15399 19 IKELESALQAQGFQTIWPQNSVDLLKFIEHNPRICGVIFDW-----DEYSL--DLCSDINQLNEYLPLYAFINTHSTMDV 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 101 MDRDL---LELVDEFAWILEDTADFIAgravAAMTRYRQQLLPPLFSALMKYSDIHEYSWAAPGHQGGVGFTKTPAGRFY 177
Cdd:PRK15399 92 SVQDMrmaLWFFEYALGAAEDIAIRIR----QYTNEYLDNITPPFTKALFTYVKEGKYTFCTPGHMGGTAYQKSPVGCLF 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 178 HDYYGENLFRTDMGIERTSLGSLLDHTGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKS 257
Cdd:PRK15399 168 YDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKS 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 258 IEQGLMLTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPltkdkAGQKPSYCVVTNCTYDGVCYNAKEAQDLL 337
Cdd:PRK15399 248 LAHLLMMSDVVPIWLKPTRNALGILGGIPRREFTRDSIEEKVAATT-----QAQWPVHAVITNSTYDGLLYNTDWIKQTL 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 338 EKTSdrLHFDEAWYGYARFNPIYADHYAMRGEPGDhnGPTVFATHSTHKLLNALSQASYIHVRegrGAINFSRFNQAYMM 417
Cdd:PRK15399 323 DVPS--IHFDSAWVPYTHFHPIYQGKSGMSGERVP--GKVIFETQSTHKMLAAFSQASLIHIK---GEYDEETFNEAFMM 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 418 HATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEftaDGSWFFKPWNKEVVTDPqtgktydfad 497
Cdd:PRK15399 396 HTSTSPSYPIVASVETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREE---SDGWFFDIWQPENVDEA---------- 462
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 498 aptkllttvqDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTTDFQ 577
Cdd:PRK15399 463 ----------ECWPVAPGEQWHGFKDADADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTGPYN 532
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 578 IMFLFSMGVTRGKWGTLVNTLCSFKRHYDANTPLAQVMPELVEQYPDTYANMGIHDLGDTMFAWLKENNPGARLNEAYSG 657
Cdd:PRK15399 533 LLFLFSIGIDKTKAMGLLRGLTEFKRAYDLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRKHDLPGLMLRAFDV 612
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 658 LPVAEVTPREAYNAIVDNNVELVSIENLPGRIAANSVIPYPPGIPMLLSGENFGDKNSPQVSYLRSLQSWDHHFPGFEHE 737
Cdd:PRK15399 613 LPEMIMTPHQAWQRQIKGEVETVALEQLVGRVSANMILPYPPGVPLLMPGEMITEESRAVLDFLLMLCSIGQHYPGFETD 692
|
730
....*....|....*...
gi 1314862422 738 TEGTEII-DGIYHVMCVK 754
Cdd:PRK15399 693 IHGAKRDeDGVYRVRVLK 710
|
|
| LdcC |
COG1982 |
Arginine/lysine/ornithine decarboxylase [Amino acid transport and metabolism]; |
134-754 |
0e+00 |
|
Arginine/lysine/ornithine decarboxylase [Amino acid transport and metabolism];
Pssm-ID: 441585 [Multi-domain] Cd Length: 486 Bit Score: 556.65 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 134 YRQQLLPPLFSALMKYSDIHEYSWAAPGHQGGVGFtktpaGRFYHDYYGENLFRTDMgIERTSLGSLLDHTGAFGESEKY 213
Cdd:COG1982 1 YMDQLLTPLFDALKKYAERGPVSFHVPGHKGGRGF-----GREFYDFFGENVFRLDL-TELPGLDDLHDPEGVIKEAQEL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 214 AARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPS-RNRYGIIGPIYpqemqP 292
Cdd:COG1982 75 AAEAFGADRTFFLVNGTSSGNKAMILAVCGPGDKVLVPRNCHKSVIHGLILSGAIPVYLNPEiDNELGIIGGIT-----P 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 293 ETLQKKISESPltkdkagqKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYAdHYAMRgepgd 372
Cdd:COG1982 150 EAVEEALIEHP--------DAKAVLITNPTYYGVCYDLKAIAELAHEHGIPVLVDEAHGAHFGFHPDLP-RSAME----- 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 373 hnGPTVFATHSTHKLLNALSQASYIHVREGRgaINFSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNsGLSLTQEVID 452
Cdd:COG1982 216 --AGADLVVQSTHKTLGALTQSSMLHVKGGR--VDHERVNEALMLLQSTSPSYLLMASLDVARRQMAGE-GEELLDEALE 290
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 453 EAVDFRQAMARLykeftadgsWFFKPWNKEVVTDPqtgktydfadaptkllttvqdcwvmhpgeswhgfkdipdNWSMLD 532
Cdd:COG1982 291 LAIEARKEINKI---------PGLYVFGPEDLGAP---------------------------------------GVYDLD 322
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 533 PIKVSILAPGMgedgeleetGVPAALVTAWLG-RHGIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLCSFKRHYDANTPL 611
Cdd:COG1982 323 PTKLTIDVPGL---------GISGYEVAEYLReEYGIQVELADLYNILFLLSLGDTKEDIERLVAALKELKRLYDKNAPL 393
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 612 AQVMPelveqypdtyanmgihdlgdtmfawlkennpgarlnEAYSGLPVAEVTPREAYNAivdnNVELVSIENLPGRIAA 691
Cdd:COG1982 394 EEVLP------------------------------------LAFPPLPELVMSPREAFFA----ETELVPLEEAVGRIAA 433
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1314862422 692 NSVIPYPPGIPMLLSGENFGDKNspqVSYLRSLQSWDHHFPGFEHETegteiidgIYHVMCVK 754
Cdd:COG1982 434 EMVIPYPPGIPLLMPGERITEEV---IDYLRALEEAGGRFPGFEDPE--------LRTIRVVK 485
|
|
| PRK15400 |
PRK15400 |
lysine decarboxylase; |
21-754 |
2.30e-177 |
|
lysine decarboxylase;
Pssm-ID: 185298 [Multi-domain] Cd Length: 714 Bit Score: 525.18 E-value: 2.30e-177
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 21 VERLADALSQQNVTVIKSTSFDDGFAILSSNEAIDCLMF---SYQMEhpdehqnvrqLIGKLHERQQNVPVFLLGDREKA 97
Cdd:PRK15400 19 IRELHRALERLNFQIVYPNDRDDLLKLIENNARLCGVIFdwdKYNLE----------LCEEISKMNENLPLYAFANTYST 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 98 LAAMDRDLLELVDEFAWILeDTADFIAGRAVAAMTRYRQQLLPPLFSALMKYSDIHEYSWAAPGHQGGVGFTKTPAGRFY 177
Cdd:PRK15400 89 LDVSLNDLRLQVSFFEYAL-GAADDIANKIKQTTDEYIDTILPPLTKALFKYVREGKYTFCTPGHMGGTAFQKSPVGSLF 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 178 HDYYGENLFRTDMGIERTSLGSLLDHTGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKS 257
Cdd:PRK15400 168 YDFFGPNTMKSDISISVSELGSLLDHSGPHKEAEEYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKS 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 258 IEQGLMLTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPltkdkAGQKPSYCVVTNCTYDGVCYNAkeaqDLL 337
Cdd:PRK15400 248 LTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETP-----NATWPVHAVITNSTYDGLLYNT----DFI 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 338 EKTSD--RLHFDEAWYGYARFNPIYADHYAMRGEPGDhnGPTVFATHSTHKLLNALSQASYIHVRegrGAINFSRFNQAY 415
Cdd:PRK15400 319 KKTLDvkSIHFDSAWVPYTNFSPIYEGKCGMSGGRVE--GKVIYETQSTHKLLAAFSQASMIHVK---GDVNEETFNEAY 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 416 MMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEftADGsWFFKPWNkevvtdpqtgktydf 495
Cdd:PRK15400 394 MMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTE--SDG-WFFDVWQ--------------- 455
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 496 adaPTKLLTTvqDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTTD 575
Cdd:PRK15400 456 ---PDHIDTT--ECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTGP 530
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 576 FQIMFLFSMGVTRGKWGTLVNTLCSFKRHYDANTPLAQVMPELVEQYPDTYANMGIHDLGDTMFAWLKENNPGARLNEAY 655
Cdd:PRK15400 531 YNLLFLFSIGIDKTKALSLLRALTDFKRAFDLNLRVKNMLPSLYREDPEFYENMRIQELAQNIHKLIVHHNLPDLMYRAF 610
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 656 SGLPVAEVTPREAYNAIVDNNVELVSIENLPGRIAANSVIPYPPGIPMLLSGENFGDKNSPQVSYLRSLQSWDHHFPGFE 735
Cdd:PRK15400 611 EVLPTMVMTPYAAFQKELHGMTEEVYLDEMVGRVNANMILPYPPGVPLVMPGEMITEESRPVLEFLQMLCEIGAHYPGFE 690
|
730 740
....*....|....*....|
gi 1314862422 736 HETEGT-EIIDGIYHVMCVK 754
Cdd:PRK15400 691 TDIHGAyRQADGRYTVKVLK 710
|
|
| Orn_deC_like |
cd00615 |
Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent ... |
141-463 |
6.60e-135 |
|
Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Pssm-ID: 99739 [Multi-domain] Cd Length: 294 Bit Score: 400.47 E-value: 6.60e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 141 PLFSALMKYSDIHEYSWAAPGHQGGVGFTKTpagrfYHDYYGENLFRTDMGiERTSLGSLLDHTGAFGESEKYAARVFGA 220
Cdd:cd00615 1 PLFEALKEYAKRGIISFHVPGHKGGRGFRKS-----FYEFYGENLFKADVT-ELTGLDDLLDPTGPIKEAQELAARAFGA 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 221 DRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRN-RYGIIGPIYPQEMQPETlqkki 299
Cdd:cd00615 75 KHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERNpYYGIAGGIPPETFKKAL----- 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 300 sespltkdKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGepgdhngpTVF 379
Cdd:cd00615 150 --------IEHPDAKAAVITNPTYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMAG--------ADI 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 380 ATHSTHKLLNALSQASYIHVREGRgaINFSRFNQAYMMHATTSPLYAICASNDVAVSMMdGNSGLSLTQEVIDEAVDFRQ 459
Cdd:cd00615 214 VVQSTHKTLPALTQGSMIHVKGDL--VNPDRVNEALNLHQSTSPSYLILASLDVARAMM-ALEGKELVEELIELALYARQ 290
|
....
gi 1314862422 460 AMAR 463
Cdd:cd00615 291 EINK 294
|
|
| PRK13578 |
PRK13578 |
ornithine decarboxylase; Provisional |
20-752 |
1.38e-127 |
|
ornithine decarboxylase; Provisional
Pssm-ID: 237434 [Multi-domain] Cd Length: 720 Bit Score: 396.64 E-value: 1.38e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 20 AVERLADALS-QQNVTVIKSTSFDDGFAILSSNEAIDclmfsyqmehpdehqnvRQLIGKLHERQQNVPVFLLGDREKAL 98
Cdd:PRK13578 8 ASRELPSCFStHREVVALDQTDFTDVAAVVLSVADSR-----------------SGILALIKRTGFGIPVFVATEEEEEV 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 99 AAmdrDLLELVDEFAWILEDTADFIAGRAVAAMTRYRQQLLPPLFSALMKYSDIHEYSWAAPGHQGGVGFTKTPAGRFYH 178
Cdd:PRK13578 71 PA---EVLPRISGVFELCESNNEFYGRQLETAASKYEENLLPPFFDTLTDYVEMGNSTFDCPGHQGGQFFRKHPAGRQFY 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 179 DYYGENLFRTDMGIERTSLGSLLDHTGAFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSI 258
Cdd:PRK13578 148 DFFGENLFRADMCNADVKLGDLLIHEGAAKDAQKHAAKVFNADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSN 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 259 EQG-LMLTGAKPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISE-SPltkDKAGQKPSY--CVVTNCTYDGVCYNAKEAQ 334
Cdd:PRK13578 228 HHGaLIQAGATPVYLETARNPFGFIGGIDAHCFDEEYLREQIREvAP---ERADEARPFrlAVIQLGTYDGTIYNARQVV 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 335 DLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDhNGPTVFATHSTHKLLNALSQASYIHVREG--RGA---INFS 409
Cdd:PRK13578 305 DKIGHLCDYILFDSAWVGYEQFIPMMADCSPLLLELNE-NDPGIFVTQSVHKQQAGFSQTSQIHKKDNhiKGQaryCPHK 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 410 RFNQAYMMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAM---ARLYKEF---TADGswffKPWnkev 483
Cdd:PRK13578 384 RLNNAFMLHASTSPFYPLFAALDVNAKMHEGESGRRLWMECVKLGIEARKLIlarCKLIRPFippVVDG----KPW---- 455
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 484 vtdpqtgktydfADAPTKLLTTVQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGM-GEDGELEETGVPAALVTAW 562
Cdd:PRK13578 456 ------------QDYPTEQIASDLRFFSFEPGEKWHGFEGYAEDQYFVDPCKLLLTTPGIdAETGEYEDFGIPATILANY 523
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 563 LGRHGIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLCSFKRHYDANTPLAQVMPELVEQYPDTYANMGIHDLGDTMFAWL 642
Cdd:PRK13578 524 LRENGIVPEKCDLNSILFLLTPAEDMAKLQQLVAMLARFEKHIEDDAPLAEVLPSVYKKNPERYRGYTLRQLCQEMHDLY 603
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 643 KENNPGARLNEAY--SGLPVAEVTPREAYNAIVDNNVELVSIENLPGRIAANSVIPYPPGIPMLLSGENFGDknsPQVSY 720
Cdd:PRK13578 604 VSHDVKQLQKEMFrkASFPRVVMNPQDANIAYIRGEVELVRLSEAEGRIAAEGALPYPPGVLCVVPGEIWGG---AVQRY 680
|
730 740 750
....*....|....*....|....*....|....*
gi 1314862422 721 LRSLQSWDHHFPGFEHETEGTEI---IDGIYHVMC 752
Cdd:PRK13578 681 FLALEEGINLLPGFAPELQGVYLetdADGRKRAYG 715
|
|
| OKR_DC_1_C |
pfam03711 |
Orn/Lys/Arg decarboxylase, C-terminal domain; |
615-743 |
3.48e-60 |
|
Orn/Lys/Arg decarboxylase, C-terminal domain;
Pssm-ID: 461020 [Multi-domain] Cd Length: 132 Bit Score: 198.90 E-value: 3.48e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 615 MPELVEQYPDTYANMGIHDLGDTMFAWLKENNPGARLNEAYSGLPVAEVTPREAYNAIVDNNVELVSIENLPGRIAANSV 694
Cdd:pfam03711 1 LPELVAAYPERYEGMGLRDLCQEMHDFYRENNVARLQKEAFRSLPEPAMTPAEAYQELVRGEVELVPLDELEGRIAAVGV 80
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1314862422 695 IPYPPGIPMLLSGENFGDKNSPQVSYLRSLQSWDHHFPGFEHETEGTEI 743
Cdd:pfam03711 81 LPYPPGIPLLMPGERFGEENRPILDYLLALEEFDNRFPGFETEIHGVYR 129
|
|
| OKR_DC_1_N |
pfam03709 |
Orn/Lys/Arg decarboxylase, N-terminal domain; This domain has a flavodoxin-like fold, and is ... |
18-134 |
2.46e-27 |
|
Orn/Lys/Arg decarboxylase, N-terminal domain; This domain has a flavodoxin-like fold, and is termed the "wing" domain because of its position in the overall 3D structure.
Pssm-ID: 427454 [Multi-domain] Cd Length: 111 Bit Score: 106.55 E-value: 2.46e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 18 GNAVERLADALSQQNVTVIKSTSFDDGFAILSSNEAIDCLMFSYQmehpdehQNVRQLIGKLHERQQNVPVFLLGDREkA 97
Cdd:pfam03709 3 IAASRELAEALERTGREVVDATSTDDLLAAIETFTDIAAVVLSWD-------DYAAGLLDEIRRRNFDLPVFLLGETH-T 74
|
90 100 110
....*....|....*....|....*....|....*..
gi 1314862422 98 LAAMDRDLLELVDEFAWILEDTADFIAGRAVAAMTRY 134
Cdd:pfam03709 75 SEDVPADVLRLIDGFIELAEDTPEFIARQIEAAAKKY 111
|
|
| AAT_I |
cd01494 |
Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP) ... |
209-400 |
4.90e-10 |
|
Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), and D-amino acid superfamily (fold type IV) and Glycogen phophorylase family (fold type V).
Pssm-ID: 99742 [Multi-domain] Cd Length: 170 Bit Score: 58.93 E-value: 4.90e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 209 ESEKYAARVFGADRSWSVVV-GTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQ-GLMLTGAKPVYMVPSRNRYGiigPIY 286
Cdd:cd01494 4 ELEEKLARLLQPGNDKAVFVpSGTGANEAALLALLGPGDEVIVDANGHGSRYWvAAELAGAKPVPVPVDDAGYG---GLD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 287 PQEMQPEtlqkkisespltkdKAGQKPSYCVVTNCTY-DGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYa 365
Cdd:cd01494 81 VAILEEL--------------KAKPNVALIVITPNTTsGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPE- 145
|
170 180 190
....*....|....*....|....*....|....*
gi 1314862422 366 mrgEPGDhngptvFATHSTHKLLNAlSQASYIHVR 400
Cdd:cd01494 146 ---GGAD------VVTFSLHKNLGG-EGGGVVIVK 170
|
|
| Pyridoxal_deC |
pfam00282 |
Pyridoxal-dependent decarboxylase conserved domain; |
238-423 |
2.99e-06 |
|
Pyridoxal-dependent decarboxylase conserved domain;
Pssm-ID: 395219 Cd Length: 373 Bit Score: 50.11 E-value: 2.99e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 238 MQACMTDNDVVVVDRNCHKSIEQGLMLTGAKpVYMVPSRNRYGIIGpiypqemqpETLQKKISESpltkDKAGQKPSYCV 317
Cdd:pfam00282 138 DSSGILAKLVAYTSDQAHSSIEKAALYGGVK-LREIPSDDNGKMRG---------MDLEKAIEED----KENGLIPFFVV 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1314862422 318 VT-----NCTYDgvcyNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYAdHYAMRGEPGDHngptvfATHSTHKLLNALS 392
Cdd:pfam00282 204 ATlgttgSGAFD----DLQELGDICAKHNLWLHVDAAYGGSAFICPEFR-HWLFGIERADS------ITFNPHKWMLVLL 272
|
170 180 190
....*....|....*....|....*....|.
gi 1314862422 393 QASYIHVREGRGAINFSRFNQAYMMHATTSP 423
Cdd:pfam00282 273 DCSAVWVKDKEALQQAFQFNPLYLGHTDSAY 303
|
|
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