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Conserved domains on  [gi|1382879137|gb|AWD29344|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Anopheles gambiae]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009588)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-115 6.98e-42

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 133.83  E-value: 6.98e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382879137   1 MLMLSTMTLIIFIITIVVMMLATLLSKKTLLDREKCSPFECGFDPMNSSRLPFSLRFFLIAIIFLIFDVEIALLLPMIMI 80
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1382879137  81 IKTSNLMNWTITSLFFIFILLIGLYHEWNQGALEW 115
Cdd:MTH00148   81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDW 115
 
Name Accession Description Interval E-value
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-115 6.98e-42

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 133.83  E-value: 6.98e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382879137   1 MLMLSTMTLIIFIITIVVMMLATLLSKKTLLDREKCSPFECGFDPMNSSRLPFSLRFFLIAIIFLIFDVEIALLLPMIMI 80
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1382879137  81 IKTSNLMNWTITSLFFIFILLIGLYHEWNQGALEW 115
Cdd:MTH00148   81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDW 115
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 1.85e-27

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 96.34  E-value: 1.85e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382879137  19 MMLATLLSKKTLlDREKCSPFECGFDPMNSSRLPFSLRFFLIAIIFLIFDVEIALLLPMIMIIKtSNLMNWTITSLFFIF 98
Cdd:pfam00507   1 LLLSRLLGPKRP-NPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR-ELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 1382879137  99 ILLIGLYHEWNQGALE 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 7-115 8.93e-23

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 85.17  E-value: 8.93e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382879137   7 MTLIIFIITIVVMMLATLLSKKTLlDREKCSPFECGFDPMNSSRLPFSLRFFLIAIIFLIFDVEIALLLPMIMIIKTSNL 86
Cdd:COG0838    11 FLLVALGLALAMLLLSRLLGPKRP-NPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGW 89

                          90       100
                  ....*....|....*....|....*....
gi 1382879137  87 MNWtITSLFFIFILLIGLYHEWNQGALEW 115
Cdd:COG0838    90 FGL-IEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-115 6.98e-42

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 133.83  E-value: 6.98e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382879137   1 MLMLSTMTLIIFIITIVVMMLATLLSKKTLLDREKCSPFECGFDPMNSSRLPFSLRFFLIAIIFLIFDVEIALLLPMIMI 80
Cdd:MTH00148    1 MLSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQS 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1382879137  81 IKTSNLMNWTITSLFFIFILLIGLYHEWNQGALEW 115
Cdd:MTH00148   81 LGSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDW 115
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 3-115 1.32e-41

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 132.98  E-value: 1.32e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382879137   3 MLSTMTLIIFIITIVVMMLATLLSKKTLLDREKCSPFECGFDPMNSSRLPFSLRFFLIAIIFLIFDVEIALLLPMIMIIK 82
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1382879137  83 TSNLMNWTITSLFFIFILLIGLYHEWNQGALEW 115
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-115 1.26e-34

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 115.47  E-value: 1.26e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382879137   1 MLMLSTMTLIIFIITIVVMMLATLLSKKTLLDREKCSPFECGFDPMNSSRLPFSLRFFLIAIIFLIFDVEIALLLPMIMI 80
Cdd:MTH00202    1 MLLILFMSILSILISSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLV 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1382879137  81 IKTSNLMNWTITSLFFIFILLIGLYHEWNQGALEW 115
Cdd:MTH00202   81 LKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDW 115
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 1-115 1.89e-31

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 107.64  E-value: 1.89e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382879137   1 MLMLSTMTLIIFIITIVVMMLATLLSKKTLLDREKCSPFECGFDPMNSSRLPFSLRFFLIAIIFLIFDVEIALLLPMIMI 80
Cdd:MTH00012    1 MSLMMIPMMISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTI 80

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1382879137  81 IKTSNLMNWTITSLFFIFILLIGLYHEWNQGALEW 115
Cdd:MTH00012   81 LMTSTSKTVVYTSILFLLILVIGLIHEWREGSLDW 115
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-117 4.99e-31

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 106.22  E-value: 4.99e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382879137   1 MLMLSTMTLIIFIITIVVMMLATLLSKKTLlDREKCSPFECGFDPMNSSRLPFSLRFFLIAIIFLIFDVEIALLLPMIMI 80
Cdd:MTH00042    1 MTNLIFFLLIILILTSLLLLAGHFLPSRSP-DLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPA 79

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1382879137  81 IKTSNLMNWTITSLFFIFILLIGLYHEWNQGALEWNE 117
Cdd:MTH00042   80 TLITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-117 8.90e-31

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 105.79  E-value: 8.90e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382879137   1 MLMLSTMTLIIFIITIVVMMLATLLSKKtlldrEKCSPFECGFDPMNSSRLPFSLRFFLIAIIFLIFDVEIALLLPMIMI 80
Cdd:MTH00106    4 MLTLLTNTLLASLLVLIAFWLPQLNIYS-----EKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWA 78

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1382879137  81 IKTSNLMNWTITSLFFIFILLIGLYHEWNQGALEWNE 117
Cdd:MTH00106   79 SQTNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 3-115 2.00e-29

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 102.27  E-value: 2.00e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382879137   3 MLSTMTLIIFIITIVVMMLATLLSKkTLLDREKCSPFECGFDPMNSSRLPFSLRFFLIAIIFLIFDVEIALLLPMIMIIK 82
Cdd:MTH00113    2 NLISMLTISLALSTILTTLNFWLTQ-TKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1382879137  83 TSNLMNWTITSLFFIFILLIGLYHEWNQGALEW 115
Cdd:MTH00113   81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEW 113
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-117 6.56e-28

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 98.45  E-value: 6.56e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382879137   1 MLMLSTMTLIIFIITIVVMMLATLLSKKTLlDREKCSPFECGFDPMNSSRLPFSLRFFLIAIIFLIFDVEIALLLPMIMI 80
Cdd:MTH00136    1 MNLITTILTITIALSLILAIVSFWLPQMTP-DHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWG 79

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1382879137  81 IKTSNLMNWTITSLFFIFILLIGLYHEWNQGALEWNE 117
Cdd:MTH00136   80 DQLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
19-114 1.85e-27

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 96.34  E-value: 1.85e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382879137  19 MMLATLLSKKTLlDREKCSPFECGFDPMNSSRLPFSLRFFLIAIIFLIFDVEIALLLPMIMIIKtSNLMNWTITSLFFIF 98
Cdd:pfam00507   1 LLLSRLLGPKRP-NPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR-ELGWFGFVEMLIFIA 78

                          90
                  ....*....|....*.
gi 1382879137  99 ILLIGLYHEWNQGALE 114
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 3-117 1.26e-26

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 95.06  E-value: 1.26e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382879137   3 MLSTMTLIIFIITIVVMMLATLLSKKTLlDREKCSPFECGFDPMNSSRLPFSLRFFLIAIIFLIFDVEIALLLPMIMIIK 82
Cdd:MTH00069    1 LIMLMLLISTILSLILITISFWLPLNNP-DSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQ 79

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1382879137  83 TSNLMNWTITSLFFIFILLIGLYHEWNQGALEWNE 117
Cdd:MTH00069   80 LNTPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 6-115 1.38e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 89.96  E-value: 1.38e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382879137   6 TMTLIIFIITIVVMMLATLLSK--KTLLDREKCSPFECGFDPMNSSRLPFSLRFFLIAIIFLIFDVEIALLLPMIMIIKT 83
Cdd:MTH00203    3 LIMLFFLIALLLSLILLFIAFWlpKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQL 82

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1382879137  84 SNlmNWTITSLFFIFILLIGLYHEWNQGALEW 115
Cdd:MTH00203   83 SS--LSLLLAFLFLILLTLGLIYEWLQGGLEW 112
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 7-115 8.93e-23

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 85.17  E-value: 8.93e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382879137   7 MTLIIFIITIVVMMLATLLSKKTLlDREKCSPFECGFDPMNSSRLPFSLRFFLIAIIFLIFDVEIALLLPMIMIIKTSNL 86
Cdd:COG0838    11 FLLVALGLALAMLLLSRLLGPKRP-NPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFRELGW 89

                          90       100
                  ....*....|....*....|....*....
gi 1382879137  87 MNWtITSLFFIFILLIGLYHEWNQGALEW 115
Cdd:COG0838    90 FGL-IEMLVFIAILLVGLIYAWKKGALEW 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 9-115 9.50e-23

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 85.30  E-value: 9.50e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382879137   9 LIIFIITIVVMMLATLLSKKTLLDREKCSPFECGFDPMNSSRLPFSLRFFLIAIIFLIFDVEIALLLPMIMIIKTSNLMN 88
Cdd:PRK06602   15 LIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSFREIGWLG 94

                          90       100
                  ....*....|....*....|....*..
gi 1382879137  89 WtITSLFFIFILLIGLYHEWNQGALEW 115
Cdd:PRK06602   95 F-VEAMIFILVLLVGLVYLWRKGALDW 120
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 9-115 4.03e-20

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 78.60  E-value: 4.03e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382879137   9 LIIFIITIVVMMLATLLSKKTLL------DREKCSPFECGFDPMNSSRLPFSLRFFLIAIIFLIFDVEIALLLPMIMIIK 82
Cdd:MTH00055    6 LGIFILLLFSIGLSTVISGASYIvgvkqpDSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYN 85

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1382879137  83 TSNLMNWTITSLFFIfILLIGLYHEWNQGALEW 115
Cdd:MTH00055   86 QIGLFGFWVMYLFLI-ILTIGLIYEWVKGGLEW 117
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 9-115 5.35e-20

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 78.18  E-value: 5.35e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382879137   9 LIIFIITIVVMMLATLLSKKTLlDREKCSPFECGFDPMNSSRLPFSLRFFLIAIIFLIFDVEIALLLPMIMIIKTSNLMN 88
Cdd:MTH00018    8 IFSVVLSALFSGASYFLGVKQP-DREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYNQIAPFG 86

                          90       100
                  ....*....|....*....|....*..
gi 1382879137  89 WTITSLFFiFILLIGLYHEWNQGALEW 115
Cdd:MTH00018   87 FWTMVGFL-FILTLGLIYEWIKGGLEW 112
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 10-116 5.71e-16

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 68.04  E-value: 5.71e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382879137  10 IIFIITIVVMMLATLLSKKTLLDREKCSPFECGFDPMNSSRLPFSLRFFLIAIIFLIFDVEIALLLPMIMIIKTSNLMNW 89
Cdd:MTH00030   18 IILLLVSISFTLGNSRIGLTKPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQLNLFSF 97

                          90       100
                  ....*....|....*....|....*..
gi 1382879137  90 TITSLFFIfILLIGLYHEWNQGALEWN 116
Cdd:MTH00030   98 WIVYTFLI-VLAIGLAYEWIKGGLEWD 123
ndhC CHL00022
NADH dehydrogenase subunit 3
 9-115 4.34e-14

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 63.08  E-value: 4.34e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382879137   9 LIIFIITIVVMMLATLLSK---KTLLDREKCSPFECGFDPMNSSRLPFSLRFFLIAIIFLIFDVEIALLLPMIMIIKTSN 85
Cdd:CHL00022   11 WAFLIISSLIPILAFLISGllaPISKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLG 90

                          90       100       110
                  ....*....|....*....|....*....|
gi 1382879137  86 LMNWtITSLFFIFILLIGLYHEWNQGALEW 115
Cdd:CHL00022   91 VSAF-IEALIFVLILIVGLVYAWRKGALEW 119
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
5-116 2.90e-10

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 53.59  E-value: 2.90e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382879137   5 STMTLIIFIITIVVMMLATLLSKKTLL----DREKCSPFECGFDPMNSSRLPFSLRFFLIAIIFLIFDVEIALLLPMIMI 80
Cdd:PRK07756    8 SYMIVLIFLLLGILLPVVALTLGRMLRpnkpSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVA 87

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1382879137  81 IKTSNLMNwTITSLFFIFILLIGLYHEWNQGALEWN 116
Cdd:PRK07756   88 YDKLGLFA-LIEMLIFVVMLLVGLAYAWKKKVLQWL 122
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
7-115 3.40e-10

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 53.52  E-value: 3.40e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382879137   7 MTLIIFIITIVVMMLATLLSKK-TLLDRE--KCSPFECGFDPMNSSRlPFSLRFFLIAIIFLIFDVEIALLLPMIMIIKT 83
Cdd:PRK08489   16 LLVLTFVAFFLTTRLARFISRKlAQKNTEklKLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFMFPWAVDFKL 94

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1382879137  84 SNLMNWtITSLFFIFILLIGLYHEWNQGALEW 115
Cdd:PRK08489   95 LGLFGL-IEMLLFIVLLTIGFIYAWKKGALEW 125
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 17-116 2.75e-07

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 45.43  E-value: 2.75e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382879137  17 VVMMLATLLSKKTLLDREKCSPFECGFDPMNSSRLP--FSLRFFLIAIIFLIFDVEIALLLPMIMiikTSNLMNW--TIT 92
Cdd:PRK07928   19 VVSVVVASLVGPKRYNRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYPWAV---SFDALGVfgLVE 95

                          90       100
                  ....*....|....*....|....
gi 1382879137  93 SLFFIFILLIGLYHEWNQGALEWN 116
Cdd:PRK07928   96 MALFMLTVFVAYAYVWRRGGLEWD 119
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 1-115 5.53e-07

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 44.50  E-value: 5.53e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382879137   1 MLMLSTMTLIIFIITIVV--MMLATLLSKKTLLDREKCSPFECGFDPMNSSRLPFSLRFFLIAIIFLIFDVEIALLLPMI 78
Cdd:MTH00060    1 MLVLLFVFFVFFLLFLVIyfFHSGLWNNKIYSGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMP 80

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1382879137  79 MIIktsNLMNWTITSLFFIFILLIGLYHEWNQGALEW 115
Cdd:MTH00060   81 FQG---LLFYNFWYYYFFLLLLFLGFVVELFSGYVRW 114
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-116 3.15e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 39.88  E-value: 3.15e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382879137   1 MLMLSTMTLIIFIITIVVMMLATLLSKKTLlDREKCSPFECGFDPMNSSRLPFSLRFFLIAIIFLIFDVEIALLLPMIMI 80
Cdd:MTH00092    1 MLVLIFVFLFTLLLLMLLYLLNFFLSVKKF-DLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEIVMFLGLLVS 79

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1382879137  81 IKTSNLMNWtitsLFFIFILLiGLYHEWNQGALEWN 116
Cdd:MTH00092   80 DFSSLISFF----MLMIFIFF-GFYMEWWYGKLIWV 110
PRK06432 PRK06432
NADH dehydrogenase subunit A; Validated
 32-115 3.91e-03

NADH dehydrogenase subunit A; Validated


Pssm-ID: 102372  Cd Length: 144  Bit Score: 34.79  E-value: 3.91e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382879137  32 DREKCSPFECGFDPMNSSRLPFSLRFFLIAIIFLIFDVEIALLLPMIMIIKTSNLMNWtITSLFFIFILLIGLYHEWNQG 111
Cdd:PRK06432   60 DQSYLEPYESGEVAREIWGGPSINQYYIVVLLFVVFDVDMLLLFPWAFDFKRLGLIPF-IETLIFLAMPLFAVYYAFKMG 138


                  ....
gi 1382879137 112 ALEW 115
Cdd:PRK06432  139 YMRW 142
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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