|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
1-637 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 870.06 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 1 MVIAPSLIISSLNLGILMILLGSIFFFSksyfsksniNSPLIKTTSACLSTNNDSEETIEYNSGPFAMAILKALALLSVL 80
Cdd:MTH00208 1 MVINPSMIISSINLSIFIILLISIFFSS---------NLPNISTSNASLGGNNNNNSIINYNNSNFSISLLKTLAFLSLI 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 81 SLLVTINAGFTEINITLSLWLSNTPLNISLNFIYDQYFLVFLSVALIVTWSIMEFSFYYMAEDPNSNAFFRLLTIFLLNM 160
Cdd:MTH00208 72 NLLIWILLGCPNINISLSNWLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIFLLNM 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 161 LILTCSNSLFLIFLGWEGVGFLSFLLISWWTTRNDASSSALEAVIYNRIGDIGLITFMALSALSFNSWNLTEILSSNNDL 240
Cdd:MTH00208 152 LILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSWNLNEILSLNNSN 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 241 TPLLPFLLFGLVLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFILVRTSDLFSLSPHAQSLVLILGGTTA 320
Cdd:MTH00208 232 SFLINILLFGILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLSLCLILGSLTA 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 321 LFAASTAIAQHDIKKIIAYSTTSQLGLMVTAIGIGQPALAFFHICTHAFFKAMLFLCSGSVIHSLSDEQDLRKMGGLSKL 400
Cdd:MTH00208 312 LFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMGGLSFL 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 401 LPVTSACLILGSLALMGTPFLAGFYSKDLILEATGASVLNLLGVVLSLVATMLTAVYSFRIIFFCFSLSPSIAPLSPIGE 480
Cdd:MTH00208 392 LPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPLSPISE 471
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 481 ENSNLNSALLRLAMGTIASGWFFSNFVFAPPSFTVTSVTKGMPLIVTIIGIAALFVSLIFFTSNYINSNTHSTTTLQWFF 560
Cdd:MTH00208 472 ENPNLTNPLLRLAIGTIISGWFFSNFVFNLPPLTLPLILKSLPLIVTIIGAAFSFSFLLSLSSNPINSNFFSFLSNQWFF 551
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1476010405 561 VDIAHSIITLFSFISSLFISSRTLDRGWQEEMGPQGIAQASTTLSKISQAGQIGLIKRYILSSMTSVLLIITVSFLI 637
Cdd:MTH00208 552 VNISHSIIISFSFFTSLFGSTRTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYIKQYLLSSTLLFLLILTLSLII 628
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
91-638 |
0e+00 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 617.56 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 91 TEINITLSLWLSNTPLNISLNFIYDQYFLVFLSVALIVTWSIMEFSFYYMAEDPNSNAFFRLLTIFLLNMLILTCSNSLF 170
Cdd:MTH00004 59 TESITTNWPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPHITKFFKYLLIFLIAMLILITANNMF 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 171 LIFLGWEGVGFLSFLLISWWTTRNDASSSALEAVIYNRIGDIGLITFMALSALSFNSWNLTEILSSNNdltpLLPFLLFG 250
Cdd:MTH00004 139 QLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSMAWLAMTLNTWEIQQLFSPTQ----TPTLPLLG 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 251 LVLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFILVRTSDLFSLSPHAQSLVLILGGTTALFAASTAIAQ 330
Cdd:MTH00004 215 LILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQ 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 331 HDIKKIIAYSTTSQLGLMVTAIGIGQPALAFFHICTHAFFKAMLFLCSGSVIHSLSDEQDLRKMGGLSKLLPVTSACLIL 410
Cdd:MTH00004 295 NDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTI 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 411 GSLALMGTPFLAGFYSKDLILEATGASVLNLLGVVLSLVATMLTAVYSFRIIFFCFSLSPSIAPLSPIGEENSNLNSALL 490
Cdd:MTH00004 375 GNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTPPTTPINENTPTIINPIT 454
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 491 RLAMGTIASGWFFSNFV--FAPPSFTVTSVTKGMPLIVTIIGIaALFVSLIFFTSNYI---NSNTHSTTTLQWFFVDIAH 565
Cdd:MTH00004 455 RLALGSILAGLLISSTIlpTKTPPMTMPTTTKLAALIVTILGI-LLALELSNMTTTLTppkQNTLHNFSNQLAFFNPLTH 533
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1476010405 566 SIITLFSFISSLFISSRTLDRGWQEEMGPQGIAQASTTLSKISQAGQIGLIKRYilssMTSVLLIITVSFLIL 638
Cdd:MTH00004 534 RLLPMTLLKSSQKIATHLIDLSWLEKMGPKGLANLQLTASKTLTTLQKGLIKNY----LTSFALTILLLLLLT 602
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
91-636 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 565.73 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 91 TEINITLSLWLSNTPLNISLNFIYDQYFLVFLSVALIVTWSIMEFSFYYMAEDPNSNAFFRLLTIFLLNMLILTCSNSLF 170
Cdd:MTH00211 54 LETILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNINRFFKYLLLFLIFMLILVSANNLF 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 171 LIFLGWEGVGFLSFLLISWWTTRNDASSSALEAVIYNRIGDIGLITFMALSALSFNSWNLTEILSSNNDLTPLLPFLLFg 250
Cdd:MTH00211 134 QLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIGLLLSMVWLLLNLNSWEISQLFILNLDLTLFLLGLLL- 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 251 lvlAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFILVRTSDLFSLSPHAQSLVLILGGTTALFAASTAIAQ 330
Cdd:MTH00211 213 ---AAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQ 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 331 HDIKKIIAYSTTSQLGLMVTAIGIGQPALAFFHICTHAFFKAMLFLCSGSVIHSLSDEQDLRKMGGLSKLLPVTSACLIL 410
Cdd:MTH00211 290 NDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFL 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 411 GSLALMGTPFLAGFYSKDLILEATGASVLNLLGVVLSLVATMLTAVYSFRIIFFCFSLSPSIAPLSPIGEENSNLNSALL 490
Cdd:MTH00211 370 GSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSPINENYKLLKNPLK 449
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 491 RLAMGTIASGWFFSNFVF--APPSFTVTSVTKGMPLIVTIIG-IAALFVSliFFTSNYINSNTHSTTTLQWFFVDIAHSI 567
Cdd:MTH00211 450 RLALGSILAGFIITSNLPpeKPEILSLPFLLKLMPLLVTIVGlLLGLELV--NLTHKQLKTSTLSFSNMLGYYPPIIHRL 527
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1476010405 568 ITLFSFISSLFISSRTLDRGWQEEMGPQGIAQASTTLSKISQAGQIGLIKRYILSSMTSVLLIITVSFL 636
Cdd:MTH00211 528 LPKLSLKWGQTLSTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSYLALLLLSLLLILLLFLL 596
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
100-633 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 565.63 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 100 WLSNTPLNISLNFIYDQYFLVFLSVALIVTWSIMEFSFYYMAEDPNSNAFFRLLTIFLLNMLILTCSNSLFLIFLGWEGV 179
Cdd:MTH00108 68 WMTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGV 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 180 GFLSFLLISWWTTRNDASSSALEAVIYNRIGDIGLITFMALSALSFNSWNLTEILSSNNDLTPLLPFLLFGlvlAAAGKS 259
Cdd:MTH00108 148 GIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIFMLNPNNSNLPLMGLLL---AATGKS 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 260 AQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFILVRTSDLFSLSPHAQSLVLILGGTTALFAASTAIAQHDIKKIIAY 339
Cdd:MTH00108 225 AQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAF 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 340 STTSQLGLMVTAIGIGQPALAFFHICTHAFFKAMLFLCSGSVIHSLSDEQDLRKMGGLSKLLPVTSACLILGSLALMGTP 419
Cdd:MTH00108 305 STSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMP 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 420 FLAGFYSKDLILEATGASVLNLLGVVLSLVATMLTAVYSFRIIFFCFSLSPSIAPLSPIGEENSNLNSALLRLAMGTIAS 499
Cdd:MTH00108 385 FLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFA 464
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 500 GWFFSNFV--FAPPSFTVTSVTKGMPLIVTIIGIaALFVSLIFFTSN---YINSNTHSTTTLQWFFVDIAHSIITLFSFI 574
Cdd:MTH00108 465 GFLISNNIppTTIPQMTMPLYLKLTALAVTILGF-ILALELNLLTNNlkfKYPSNTFKFSNMLGYFPTIMHRLPPYMNLT 543
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 1476010405 575 SSLFISSRTLDRGWQEEMGPQGIAQASTTLSkISQAGQIGLIKRYILSSMTSVLLIITV 633
Cdd:MTH00108 544 MSQKLASMLLDLIWLEKILPKTISLIQMKAS-TTISNQKGLIKLYFLSFLITLTLSLLL 601
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
91-632 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 565.23 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 91 TEINITLSLWLSNTPLNISLNFIYDQYFLVFLSVALIVTWSIMEFSFYYMAEDPNSNAFFRLLTIFLLNMLILTCSNSLF 170
Cdd:MTH00137 63 AETIITNWNWMNTLTFDINISFKFDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLIFLIAMIILVTANNMF 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 171 LIFLGWEGVGFLSFLLISWWTTRNDASSSALEAVIYNRIGDIGLITFMALSALSFNSWNLTEILSSNNDLTPLLPFLLFG 250
Cdd:MTH00137 143 QLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGLILAMAWMATNLNSWEIQQIFALSKDFDLTLPLLGLI 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 251 LvlAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFILVRTSDLFSLSPHAQSLVLILGGTTALFAASTAIAQ 330
Cdd:MTH00137 223 L--AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQ 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 331 HDIKKIIAYSTTSQLGLMVTAIGIGQPALAFFHICTHAFFKAMLFLCSGSVIHSLSDEQDLRKMGGLSKLLPVTSACLIL 410
Cdd:MTH00137 301 NDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTI 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 411 GSLALMGTPFLAGFYSKDLILEATGASVLNLLGVVLSLVATMLTAVYSFRIIFFCFSLSPSIAPLSPIGEENSNLNSALL 490
Cdd:MTH00137 381 GSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVVFFVSMGHPRFNPLSPINENNPAVINPIK 460
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 491 RLAMGTIASGWF-FSNFV-FAPPSFTVTSVTKGMPLIVTIIG-IAALfvSLIFFTSNYI----NSNTHSTTTLQWFFVDI 563
Cdd:MTH00137 461 RLAWGSIIAGLLiTSNILpLKTPVMTMPPLLKLAALIVTILGlLIAL--ELASLTNKQFkptpTLPPHHFSNMLGFFPAI 538
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1476010405 564 AHSIITLFSFISSLFISSRTLDRGWQEEMGPQGIAQASTTLSKISQAGQIGLIKRY----ILSSMTSVLLIIT 632
Cdd:MTH00137 539 IHRLTPKLNLTLGQTIATQMVDQTWLEKTGPKGIASLQLPLITTTSNIQQGMIKTYltlfLLTLALATLLLLL 611
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
86-633 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 558.76 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 86 INAGFTEINITLSlWLSNTPLNISLNFIYDQYFLVFLSVALIVTWSIMEFSFYYMAEDPNSNAFFRLLTIFLLNMLILTC 165
Cdd:MTH00066 53 INQGLESITTSFH-WMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDPKINRFFKYLLIFLIAMMILVT 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 166 SNSLFLIFLGWEGVGFLSFLLISWWTTRNDASSSALEAVIYNRIGDIGLITFMALSALSFNSWNLTEILSSNNDLTPLLP 245
Cdd:MTH00066 132 ANNLFQLFIGWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIFLLNDNSTLPLL 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 246 FLLFglvlAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFILVRTSDLFSLSPHAQSLVLILGGTTALFAAS 325
Cdd:MTH00066 212 GLIL----AAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAA 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 326 TAIAQHDIKKIIAYSTTSQLGLMVTAIGIGQPALAFFHICTHAFFKAMLFLCSGSVIHSLSDEQDLRKMGGLSKLLPVTS 405
Cdd:MTH00066 288 CALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITT 367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 406 ACLILGSLALMGTPFLAGFYSKDLILEATGASVLNLLGVVLSLVATMLTAVYSFRIIFFCFSLSPSIAPLSPIGEENSNL 485
Cdd:MTH00066 368 SCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINENNPLI 447
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 486 NSALLRLAMGTIASGW--FFSNFVFAPPSFTVTSVTKGMPLIVTIIGIAALFVSLIFFTSNYINSNTHSTTTLQWFFVDI 563
Cdd:MTH00066 448 INPIKRLAWGSIIAGLliIFNILPMKPQILTMPTFMKLAALLVTLLGLLIALDLAKITSKTTPKTKMHSFSNLLAFFPTI 527
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 564 AHSIITLFSFISSLFISSRTLDRGWQEEMGPQGIAQASTTLSKISQAGQIGLIKRYILSSMTSVLLIITV 633
Cdd:MTH00066 528 IHRLSPKTNLNSGQNIATHLTDMTWYEKSGPKGLTNQQLPPIKTITNIQTGLIKTYLTLFLITLLLMLIL 597
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
100-633 |
2.11e-128 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 391.44 E-value: 2.11e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 100 WLSNTPLNISLNFIYDQYFLVFLSVALIVTWSIMEFSFYYMAEDPNSNAFFRLLTIFLLNMLILTCSNSLFLIFLGWEGV 179
Cdd:COG1009 64 WIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNLLLLFVFWELV 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 180 GFLSFLLISWWTTRNDASSSALEAVIYNRIGDIGLITFMALSALSFNSWNLTEILSSNNDLTPLLPFLLFGLV--LAAAG 257
Cdd:COG1009 144 GLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTILSSPLLTLILLLllLGAFG 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 258 KSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFILVRTSDLFSLSPHAQSLVLILGGTTALFAASTAIAQHDIKKII 337
Cdd:COG1009 224 KSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVL 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 338 AYSTTSQLGLMVTAIGIGQPALAFFHICTHAFFKAMLFLCSGSVIHSLSdEQDLRKMGGLSKLLPVTSACLILGSLALMG 417
Cdd:COG1009 304 AYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHATG-TRDIRKMGGLRKKMPITAITFLIGALSLAG 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 418 TPFLAGFYSKDLILEAT-GASVLNLLGVVLSLVATMLTAVYSFRIIFFCFSLSPSIAPLSPIGEENSNLNSALLRLAMGT 496
Cdd:COG1009 383 IPPFAGFFSKEAILEAAlEAGGLGPLLLAVALLGAFLTAFYSFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLS 462
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 497 IASGWFFSNFV---FAPPSFTVTSVT-------KGMPLIVTIIGIAalfVSLIFFTSNYINSNTHSTTTLQ------WFF 560
Cdd:COG1009 463 LVLGLLLPGLLeglLAPAAVLGGELHlahglllNALPLLLSLLGIA---LGYLLYLKRPLPALAERLKPLYrllankWYF 539
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1476010405 561 VDIAHSIITLFSFISSLFISsrtLDRGWQEEMgPQGIAQASTTLSKISQAGQIGLIKRYILSSMTSVLLIITV 633
Cdd:COG1009 540 DELYDALFVKPVRALARFLW---FDRYVIDGI-VNGLARLTLFSGRLLRRLQTGYLQFYALTILLGVVVLLLL 608
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
93-532 |
5.04e-128 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 390.67 E-value: 5.04e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 93 INITLSLWLSNTPLNISLNFIYDQYFLVFLSVALIVTWSIMEFSFYYMAEDPNSNAFFRLLTIFLLNMLILTCSNSLFLI 172
Cdd:PRK06590 61 FSQTLWTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDNLLQL 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 173 FLGWEGVGFLSFLLISWWTTRNDASSSALEAVIYNRIGDIGLITFMALSALSFNSWNLTEILSSNNDLTPLLPFLLFGLV 252
Cdd:PRK06590 141 FFGWEGVGLCSYLLIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYDEVFAAAPQFFGLGWSALTLIC 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 253 L----AAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFILVRTSDLFSLSPHAQSLVLILGGTTALFAASTAI 328
Cdd:PRK06590 221 LllfiGAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGL 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 329 AQHDIKKIIAYSTTSQLGLMVTAIGIGQPALAFFHICTHAFFKAMLFLCSGSVIHSLSDEQDLRKMGGLSKLLPVTSACL 408
Cdd:PRK06590 301 VQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATF 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 409 ILGSLALMGTPFLAGFYSKDLILEATGASVLNLLGVVLsLVATMLTAVYSFRIIFFCF-------SLSPSIAPLSpigee 481
Cdd:PRK06590 381 LIGTLALIGIPPFAGFFSKDEILEAAFANGHINLFVAG-LVGAFLTAFYSFRLIFLVFhgkekekIHHPHESPAV----- 454
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1476010405 482 nsnLNSALLRLAMGTIASGWF----FSNFVFAPPS-------FTVTSVTKGMPLIVTIIGIA 532
Cdd:PRK06590 455 ---MTLPLIVLAVLSVFAGALivppFLGVLPLTTElahgeaeHHLPVWVALLPLVVALAGIA 513
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
93-532 |
1.25e-122 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 376.62 E-value: 1.25e-122
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 93 INITLSLWLSNTPLNISLNFIYDQYFLVFLSVALIVTWSIMEFSFYYMAEDPNSNAFFRLLTIFLLNMLILTCSNSLFLI 172
Cdd:TIGR01974 60 FTQSLFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQL 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 173 FLGWEGVGFLSFLLISWWTTRNDASSSALEAVIYNRIGDIGLITFMALSALSFNSWNLTEILS-SNNDLTPLLPFLLFGL 251
Cdd:TIGR01974 140 FFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLNFQEVFAlAPGAFFSALTLICLLL 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 252 VLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFILVRTSDLFSLSPHAQSLVLILGGTTALFAASTAIAQH 331
Cdd:TIGR01974 220 FIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAATVALVQN 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 332 DIKKIIAYSTTSQLGLMVTAIGIGQPALAFFHICTHAFFKAMLFLCSGSVIHSLSDEQDLRKMGGLSKLLPVTSACLILG 411
Cdd:TIGR01974 300 DIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIG 379
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 412 SLALMGTPFLAGFYSKDLILEATGASVLNLLGVVLSLVATMLTAVYSFRIIFFCFSLSPSIAPLSPIGEENSNLNSALLR 491
Cdd:TIGR01974 380 SLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKERHEADAHPHESPLVMLLPLIV 459
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 1476010405 492 LAMGTIASGWFFSNFV--FAPPSFTVTS----------VTKGMPLIVTIIGIA 532
Cdd:TIGR01974 460 LAVGSVFAGFFIVPLFefLKGVLPTSAEpalehhhvpaLEIWSPTAVAILGIL 512
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
86-636 |
8.78e-117 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 361.32 E-value: 8.78e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 86 INAGFTEINITLSLWLSNTPLNISLNFIYDQYFLVFLSVALIVTWSIMEFSFYYMAEDPNSNAFFRLLTIFLLNMLILTC 165
Cdd:MTH00020 50 ILFNSSTTYIKLWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVT 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 166 SNSLFLIFLGWEGVGFLSFLLISWWTTRNDASSSALEAVIYNRIGDIGLITFMAL-----SALSFNS-WNLTEILSSNNd 239
Cdd:MTH00020 130 SDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLlwdrfGSLDFSSvFNMVVSAPSSD- 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 240 ltplLPFLLFGLVLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFILVRTSDLFSLSPHAQSLVLILGGTT 319
Cdd:MTH00020 209 ----ITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLT 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 320 ALFAASTAIAQHDIKKIIAYSTTSQLGLMVTAIGIGQPALAFFHICTHAFFKAMLFLCSGSVIHSLSDEQDLRKMGGLSK 399
Cdd:MTH00020 285 VFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLIS 364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 400 LLPVTSACLILGSLALMGTPFLAGFYSKDLILEATGASVLNLLGVVLSLVATMLTAVYSFRIIFFCFSLSP--SIAPLSP 477
Cdd:MTH00020 365 FLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTnlKKAVFFH 444
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 478 IGEENSNLNSALLRLAMGTIASGWFFSNFVFAP---PSFTVTSVTKGMPLIVTIIGIAALFVslIFFTSNYINSNTHSTT 554
Cdd:MTH00020 445 LHEGDWNLLLPLGILALGSIFVGYLAKEMIWSFqitLPPIVPLSIKLLPVFLSLGGIGLVII--LYFYSSKTFRVPFSFI 522
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 555 TLQ--------WFFVDIAHSIITLFSFISSLFISSRTLDRGWQEEMGPQGIAQASTTLSKISQAGQIGLIKRYILssmts 626
Cdd:MTH00020 523 GRNsytflgsaWQFNYILNYFLIKKIWKGGHLISYRTIDKGVLELVGPKGISNFLIILTQGLSSLQSGLVFNYAL----- 597
|
570
....*....|
gi 1476010405 627 VLLIITVSFL 636
Cdd:MTH00020 598 VILIGVAIFI 607
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
106-634 |
1.10e-109 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 341.44 E-value: 1.10e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 106 LNISLNFIYDQYFLVFLSVALIVTWSIMEFSFYYMAEDPNSNAFFRLLTIFLLNMLILTCSNSLFLIFLGWEGVGFLSFL 185
Cdd:MTH00151 44 CSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFA 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 186 LISWWTTrNDASSSALEAVIYNRIGDIGLITFMALSALSfNSWNLTEILSSNndltpLLPFLLFGLVLAAAGKSAQFGLH 265
Cdd:MTH00151 124 LVIYYQN-KKSLSAGMLTALTNRIGDVLILLSIALLVLL-GHWSILSMWDFK-----LSGWLGLLLVLAAMTKSAQIPFS 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 266 PWLPAAMEGPTPVSALLHSSTMVVAGVFILVRTSDLFSLSPHAQSLVLILGGTTALFAASTAIAQHDIKKIIAYSTTSQL 345
Cdd:MTH00151 197 SWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQL 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 346 GLMVTAIGIGQPALAFFHICTHAFFKAMLFLCSGSVIHSLSDEQDLRKMGGLSKLLPVTSACLILGSLALMGTPFLAGFY 425
Cdd:MTH00151 277 GVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFY 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 426 SKDLILEATGASVLNLLGVVLSLVATMLTAVYSFRIIFFCFSLSPSIAPLSPIGEENSNLNSALLRLAMGTIASGWFFSN 505
Cdd:MTH00151 357 SKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSSSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQS 436
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 506 -FVFAPPSFTVTSVTKGMPLIVTIIGiaaLFVSLIFFTSNYINSNTHSTTTL--QWFFVDIAHSIITLFSFISSLFISSR 582
Cdd:MTH00151 437 lFEGFSEEFFLPSYLKLLIGFVILLG---LFLSFGFWDSGFSSSKMVKLSFFfsSMWFLSPLSSQPLKSLSLKLSNSSMK 513
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|..
gi 1476010405 583 TLDRGWQEEMGPQGIAQASTTLSKISQAGQIGLIKRYILSSMTSVLLIITVS 634
Cdd:MTH00151 514 SLDMGWLEILGGQGVFKANKSFSVLNESWPVKWFNFFIGLILLLVLFLVVIS 565
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
95-634 |
4.55e-108 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 338.91 E-value: 4.55e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 95 ITLSLWLSNTPLNISLNFIYDQYFLVFLSVALIVTWSIMEFSFYYMAEDPNSNAFFRLLTIFLLNMLILTCSNSLFLIFL 174
Cdd:MTH00210 59 IKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFI 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 175 GWEGVGFLSFLLISWWTTRNDASSSALEAVIYNRIGDIGLITFMALSALSFNSWNLTEI--LSSNNDLTPLLPFLLFGLV 252
Cdd:MTH00210 139 GWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTIssLLVTNINKESLTIICLLLF 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 253 LAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFILVRTSDLFSLSPHAQSLVLILGGTTALFAASTAIAQHD 332
Cdd:MTH00210 219 IGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFAATVGVVQND 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 333 IKKIIAYSTTSQLGLMVTAIGIGQPALAFFHICTHAFFKAMLFLCSGSVIHSLSDEQDLRKMGGLSKLLPVTSACLILGS 412
Cdd:MTH00210 299 LKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGS 378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 413 LALMGTPFLAGFYSKDLILEATGASVLNLLGVVLSLVATMLTAVYSFRIIFFCFSLSPSIAPLSPIGEENSNLN--SALL 490
Cdd:MTH00210 379 LSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEVFIGVHESSWNitFPLL 458
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 491 RLAMGTIASGW-----FFSNfVFAPpsfTVTSVTKGMPLIVTIIGIAALFVSLIFFTSNYINSNTHSTTTLQ-------- 557
Cdd:MTH00210 459 LLAFGSIFVGYlgkevVLSN-VIPP---IVPNSIKMIPLLFSLLGALLAFVIYNSMVFLIKISRRGVSIRLYhviytfln 534
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1476010405 558 --WFFVDIAHSIITLFSFISSLFISSRTLDRGWQEEMGPQGIAQASTTLSKISQAGQIGLIKRYILSSMTSVLLIITVS 634
Cdd:MTH00210 535 saWQFNYVINHFIVKNIWKFGHLITYRIIDRGLLEIIGPRGISKVLIKLTQKISNLQSGMVFNYALIMIIFTTLFISGA 613
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
106-635 |
1.30e-105 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 331.34 E-value: 1.30e-105
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 106 LNISLNFIYDQYFLVFLSVALIVTWSIMEFSFYYMAEDPNSNAFFRLLTIFLLNMLILTCSNSLFLIFLGWEGVGFLSFL 185
Cdd:MTH00165 44 SSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNINRFIYLVLLFVLSMMLLIISPNLISILLGWDGLGLVSYC 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 186 LISWWTTrNDASSSALEAVIYNRIGDIGLITFMALSaLSFNSWNLTEILSSNNDLTPLLPFLLFGLVlAAAGKSAQFGLH 265
Cdd:MTH00165 124 LVIYYQN-KKSYNAGMLTALSNRIGDVAILLSIAWM-MNFGSWNFIFYLDFMKNSFEMLLIGLLIML-AAMTKSAQIPFS 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 266 PWLPAAMEGPTPVSALLHSSTMVVAGVFILVRTSDLFSLSPhAQSLVLILGGTTALFAASTAIAQHDIKKIIAYSTTSQL 345
Cdd:MTH00165 201 SWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSSF-FSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQL 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 346 GLMVTAIGIGQPALAFFHICTHAFFKAMLFLCSGSVIHSLSDEQDLRKMGGLSKLLPVTSACLILGSLALMGTPFLAGFY 425
Cdd:MTH00165 280 GLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFY 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 426 SKDLILEATGASVLNLLGVVLSLVATMLTAVYSFRIIFFCFSLSPSIAPLSPIGEENSNLNSALLRLAMGTIASGWFFSN 505
Cdd:MTH00165 360 SKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSW 439
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 506 FVFAPPSFTVTSVT-KGMPLIVTIIGIaaLFVSLIFFTSNYINSNTHSTTTLQWF-----FVDIAHSIITLFSFISSLFI 579
Cdd:MTH00165 440 LIFPEPYMICLPFYlKLLTLFVILLGG--WLGYELSLMSLSYNLKSLKNYKLSSFlgsmwFMPFLSTYGISYYPLNLGSL 517
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*.
gi 1476010405 580 SSRTLDRGWQEEMGPQGIAQASTTLSKISQAGQIGLIKRYILSSMTSVLLIITVSF 635
Cdd:MTH00165 518 SLKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLSFLLWMIILLLLFL 573
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
105-631 |
7.94e-101 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 318.51 E-value: 7.94e-101
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 105 PLNISLNFIYDQYFLVFLSVALIVTWSIMEFSFYYMAEDPNSNAFFRLLTIFLLNMLILTCSNSLFLIFLGWEGVGFLSF 184
Cdd:MTH00209 41 SMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFILSMNFLIFVPNLITLLLGWDGLGLVSY 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 185 LLISWWTTrNDASSSALEAVIYNRIGDIGLITFMAlSALSFNSWNLteilSSNNDLTPLLPFLLFGLVLAAAGKSAQFGL 264
Cdd:MTH00209 121 LLVIYYQN-SKSLSAGMLTALTNRVGDALLILSIA-WMLMHGNWNI----FYLNFNSNLGSVISVLIVLAAMTKSAQIPF 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 265 HPWLPAAMEGPTPVSALLHSSTMVVAGVFILVRTSDLFSLSPHAQSLVLILGGTTALFAASTAIAQHDIKKIIAYSTTSQ 344
Cdd:MTH00209 195 SAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQ 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 345 LGLMVTAIGIGQPALAFFHICTHAFFKAMLFLCSGSVIHSLSDEQDLRKMGGLSKLLPVTSACLILGSLALMGTPFLAGF 424
Cdd:MTH00209 275 LGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGF 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 425 YSKDLILEATGASVLNLLGVVLSLVATMLTAVYSFRIIFFCFSLSPSIAPLSPIGEENSNLNSALLRLAMGTIASGWFFS 504
Cdd:MTH00209 355 YSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNSSFDQNKLNLKPMLVLTLGSITGGSVMS 434
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 505 NFVFAPP-SFTVTSVTKGMPLIVTIIGIAALFVSLIFFTSNYINSNTHSTTTLQWFFVDIAHSIItLFSFISSLFISSRT 583
Cdd:MTH00209 435 WVMVPSVnSVVLPWFLKLLPIMLILFGVLLMYMVLKKNFFLIKGYKVNYFLSQMWFLPDLSSQPV-NKFTMKLSKTMLKL 513
|
490 500 510 520
....*....|....*....|....*....|....*....|....*...
gi 1476010405 584 LDRGWQEEMGPQGIAQASTTLSKISQAGQIGLIKRYILSSMTSVLLII 631
Cdd:MTH00209 514 LDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMMLILLGVI 561
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
101-633 |
7.11e-98 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 310.93 E-value: 7.11e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 101 LSNTPLNISLnfIYDQYFLVFLSVALIVTWSIMEFSFYYMAEDPNSNAFFRLLTIFLLNMLILTCSNSLFLIFLGWEGVG 180
Cdd:MTH00207 44 ISSSPINFTI--ILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLG 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 181 FLSFLLISWWTTRNDASSSALEAVIyNRIGDIGLITFMALSaLSFNSWNLTEILSSNndltpLLPFLLFGLVLAAAGKSA 260
Cdd:MTH00207 122 LVSFILVIYYQNPKSLGAGMITALT-NRIGDVMLLLSIGWT-LNQGHWSITNMWQTD-----MNNYIALSIMIAAMTKSA 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 261 QFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFILVRTSDLFSLSPHAQSLVLILGGTTALFAASTAIAQHDIKKIIAYS 340
Cdd:MTH00207 195 QMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALS 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 341 TTSQLGLMVTAIGIGQPALAFFHICTHAFFKAMLFLCSGSVIHSLSDEQDLRKMGGLSKLLPVTSACLILGSLALMGTPF 420
Cdd:MTH00207 275 TLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPF 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 421 LAGFYSKDLILEATGASVLNLLGVVLSLVATMLTAVYSFRIIFFCFSLSPSIAPLSPIGEENSNLNSALLRLAMGTIASG 500
Cdd:MTH00207 355 LSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNSSSPYHHLEDEDKSLTTPMLLLTLGAITSG 434
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 501 WFFSNFVFAPPS-FTVTSVTKGMPLIVTIIGIAALFVSLIFFTSN---YINSN-THSTTTLQWFFVDIAhSIITLFSFIS 575
Cdd:MTH00207 435 SALNWWLPTPQEePILPLQYKLLPLLVVTLGALLAWLFTTPNITKtplLINNPlSHFASCLMWFLVPLS-SQFIMSTPMN 513
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*...
gi 1476010405 576 SLFISSRTLDRGWQEEMGPQGIAQASTTLSKISQAGQIGLIKRYILSSMTSVLLIITV 633
Cdd:MTH00207 514 LSHNYLKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNNYLMMSFVLLTIIIIM 571
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
93-638 |
2.31e-91 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 296.87 E-value: 2.31e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 93 INITLSLWLSNTPLNISLNFIYDQYFLVFLSVALIVTWSIMEFSFYYMAEDPNSNAFFRLLTIFLLNMLILTCSNSLFLI 172
Cdd:MTH00032 57 VHIELYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQL 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 173 FLGWEGVGFLSFLLISWWTTRNDASSSALEAVIYNRIGDIGLITFMAL-----SALSFNSWNLTEILS-----------S 236
Cdd:MTH00032 137 FIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLiyktiGSLDFLTFNGGSVGSgimdrgyygggA 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 237 NNDLTPLLPFLLFGLVLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFILVRTSDLFSLSPHAQSLVLILG 316
Cdd:MTH00032 217 YESPLAPFAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFG 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 317 GTTALFAASTAIAQHDIKKIIAYSTTSQLGLMVTAIGI-GQPALAFFHICTHAFFKAMLFLCSGSVIHSLS-DEQDLRKM 394
Cdd:MTH00032 297 ALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIeGSHNVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKM 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 395 GGLSKLLPVTSACLILGSLALMGTPFLAGFYSKDLILEAT----------GASVLNLLGVV------------------- 445
Cdd:MTH00032 377 GGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILELTysgrnmgipfGSSLLKIQGDIgikkddrgsiggpegypsr 456
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 446 -------LSLVATMLTAVYSFRIIFFCFSLSPSIAPLSPIGEE----NSNLNSALLRLAMGTIASGWFFSNFVFAPPSF- 513
Cdd:MTH00032 457 gsafafwLGTVAALLTAFYSIRLVYITFIISPNSPKESLISSHinivDKRVLTVLSLLCFGAIFVGYLIQDILIGDIEHp 536
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 514 TVTSVTKGMPLIVTIIGIA-------ALFVSLIFFTSNYINS----NTHSTTTLQWFFVDIAHSIITLFSFISSLFISSR 582
Cdd:MTH00032 537 IVPPLIKVMPTLMGLFGMGlclwaqkGTREGELYWGFDPIGPsfllSIYSFLGGAWQGDHLINKLVAIPLFSFGHWGIYK 616
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*.
gi 1476010405 583 TLDRGWQEEMGPQGIAQASTTLSKISQAGQIGLIKRYILssmtsVLLIITVSFLIL 638
Cdd:MTH00032 617 TLDRGWLELFGPQGISTIALRVSQFISNLQSGVISRYAL-----VLLSFTIIFLAL 667
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
100-466 |
4.02e-90 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 293.47 E-value: 4.02e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 100 WLSNTPLNISLNFIYDQYFLVFLSVALIVTWSIMEFSFYYMAEDPNSNAFFRLLTIFLLNMLILTCSNSLFLIFLGWEGV 179
Cdd:PRK07376 75 WASAGDFHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELV 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 180 GFLSFLLISWWTTRNDASSSALEAVIYNRIGDIGLI-----TFMALSALSFNSW--NLTEILSSNNDLTPLLPFLLFGLV 252
Cdd:PRK07376 155 GMCSYLLVGFWYDRKGAADAAQKAFVVNRVGDFGLLlgilgLFWATGSFDFDGIadRLSELVSSGAVSGWLALLLCILVF 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 253 LAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFILVRTSDLFSLSPHAQSLVLILGGTTALFAASTAIAQHD 332
Cdd:PRK07376 235 LGPMAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQND 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 333 IKKIIAYSTTSQLGLMVTAIGIGQPALAFFHICTHAFFKAMLFLCSGSVIHSLSD--------EQDLRKMGGLSKLLPVT 404
Cdd:PRK07376 315 IKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQDMRLMGGLRKYMPIT 394
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1476010405 405 SACLILGSLALMGTPFLAGFYSKDLILEATGASVLnLLGVVLSLVATMlTAVYSFRIIFFCF 466
Cdd:PRK07376 395 AITFLIGCLAISGIPPFAGFWSKDEILGAAFEANP-ALWFVGFLTAGM-TAFYMFRMYFLTF 454
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
123-466 |
2.51e-65 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 228.62 E-value: 2.51e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 123 SVALIVtwsiMEFSFYYMAEDPNSNAFFRLLTIFLLNMLILTCSNSLFLIFLGWEGVGFLSFLLISWWTTRNDASSSALE 202
Cdd:CHL00025 102 TVGILV----LIYSDNYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQK 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 203 AVIYNRIGDIGLItfmaLSAL-------SFNSWNLTEIL----SSNNDLTPLLPFLLFGLVLAAAGKSAQFGLHPWLPAA 271
Cdd:CHL00025 178 AFVTNRVGDFGLL----LGILgfywitgSFEFRDLFEIFnnliYNNEVNLLFATLCAFLLFLGPVAKSAQFPLHVWLPDA 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 272 MEGPTPVSALLHSSTMVVAGVFILVRTSDLFSLSPHAQSLVLILGGTTALFAASTAIAQHDIKKIIAYSTTSQLGLMVTA 351
Cdd:CHL00025 254 MEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLA 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 352 IGIGQPALAFFHICTHAFFKAMLFLCSGSVIHSL--------SDEQDLRKMGGLSKLLPVTSACLILGSLALMGTPFLAG 423
Cdd:CHL00025 334 LGIGSYRAALFHLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLAC 413
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1476010405 424 FYSKDLILEATGASVLnLLGVVLSLVATmLTAVYSFRIIFFCF 466
Cdd:CHL00025 414 FWSKDEILNDSWLYSP-IFAIIAWSTAG-LTAFYMFRIYLLTF 454
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
108-466 |
7.61e-57 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 207.20 E-value: 7.61e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 108 ISLNFIYDQYFLVFLSVALIVTWSIMEFSFYYMAEDPNSNAFFRLLTIFLLNMLILTCSNSLFLIFLGWEGVGFLSFLLI 187
Cdd:PRK12650 71 VNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLI 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 188 SwwTTRNDASSSALEAVIYNRIGDIGLITFMALSALSFNSWNLTEILSSN--NDLTPLLPFLLFGLVLAAAGKSAQFGLH 265
Cdd:PRK12650 151 A--RSGSGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGILHSDvwAEKPGLTTVVAVLIAVAAFTKSAQFPFH 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 266 PWLPAAMEGPTPVSALLHSSTMVVAGVFILVRTSDLFSLSPHAQSLVLILGGTTALFAASTAIAQHDIKKIIAYSTTSQL 345
Cdd:PRK12650 229 FWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQL 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 346 GLMVTAIGIGQP---ALAFFHICTHAFFKAMLFLCSGSVIHSlSDEQDLRKMGGLSKLLPVTSACLILGSLALMGTPFLA 422
Cdd:PRK12650 309 GWIVATIGVGTPfalTAAVVHTLAHALFKSSLFMLIGVVDHQ-AGTRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLF 387
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 1476010405 423 GFYSKDLILEATGASVLNLLGVVLSLVATMLTAV----YSFRIIFFCF 466
Cdd:PRK12650 388 GFVSKEGMLTAFLEAPGGNAGVVLLLVGAALGAVftfaYSARLVLGAF 435
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
96-462 |
4.28e-52 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 185.35 E-value: 4.28e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 96 TLSLWLSNTPLNISLNFIYDQYFLVFLSVALIVTWSIMEFSFYYMAEDPNSNAFFRLLTIFLLNMLILTCSNSLFLIFLG 175
Cdd:COG0651 56 PLVYALGGWPAPFGIVLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVF 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 176 WEGVGFLSFLLISWWTTRnDASSSALEAVIYNRIGDIGLITFMALSALSFNSWNLTEILSSNNDLTPLLPFLLFGLVLAA 255
Cdd:COG0651 136 FEVMLLASYGLVALGGTK-EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLLAAFALLLVG 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 256 AG-KSAQFGLHPWLPAAM-EGPTPVSALLhSSTMVVAGVFILVRTSDLF---SLSPHAQSLVLILGGTTALFAASTAIAQ 330
Cdd:COG0651 215 FGiKAALFPLHFWLPDAYpAAPSPVSALL-SGLLTKVGVYAILRVLTLLfgaDPALFLGTLLLVLGLLTMLVGALGALAQ 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 331 HDIKKIIAYSTTSQLGLMVTAIGIGQPAL---AFFHICTHAFFKAMLFLCSGSVIHSLsDEQDLRKMGGLSKLLPVTSAC 407
Cdd:COG0651 294 RDLKRLLAYSSVSQIGYILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERAT-GTRDLDKLGGLGKRMPLTAAA 372
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 1476010405 408 LILGSLALMGTPFLAGFYSKDLILEAtGASVLNLLGVVLSLVATMLTAVYSFRII 462
Cdd:COG0651 373 FLIGALALAGLPPLSGFVSKWLLLQA-ALEAGAWLLAAVLLLSSLLTLAYFVRIF 426
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
138-480 |
6.99e-52 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 192.83 E-value: 6.99e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 138 YYMAEDPNSNAFFRLLTIFLLNMLILTCSNSLFLIFLGWEGVGFLSFLLISWWTTRNDASSSALEAVIYNRIGDIGLITF 217
Cdd:PRK12644 97 YFDDDEPRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVG 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 218 MALSALSFNSWNLTEILSsNNDLTPLLPFLLFGLVLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFILVR 297
Cdd:PRK12644 177 IIILGQAAGTYRLSELLA-DPPTGPAVSVAVVLILVGALSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVAR 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 298 TSDLFSLSPHAQSLVLILGGTTALFAASTAIAQHDIKKIIAYSTTSQLGLMVTAIGIGQPALAF---FHICTHAFFKAML 374
Cdd:PRK12644 256 LAPGFADVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALaglAMLLAHALFKAAL 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 375 FLCSGSVIHSlSDEQDLRKMGGLSKLLPVTSACLILGSLALMGTPFLAGFYSKDLILEA-------TGASVLNLLGVVLs 447
Cdd:PRK12644 336 FLVVGIIDHS-TGTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALEAvlhdgalGPAGPVVLAGIVL- 413
|
330 340 350
....*....|....*....|....*....|...
gi 1476010405 448 lvATMLTAVYSFRIIFFCFSLSPSIAPLSPIGE 480
Cdd:PRK12644 414 --GSILTVAYSLRFLWGAFARKPGAFPSVAVTE 444
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
135-466 |
7.42e-52 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 191.60 E-value: 7.42e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 135 FSFYYMAEDPNSNAFFRLLTIFLLNMLILTCSNSLFLIFLGWEGVGFLSFLLISWWTTRNDASSSALEAVIYNRIGDIGL 214
Cdd:TIGR00940 94 YSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRAHSRYGAQKSLTITVFGGLAM 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 215 ITFMALSALSFNSWNLTEILSSNNDLTP--LLPFLLFGLVLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGV 292
Cdd:TIGR00940 174 LGGLILLGKITGSFSIDAVIASADAIRNspLFGTAMVLVLLGAFTKSAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGL 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 293 FILVRTSDLFSLSPHAQSLVLILGGTTALFAASTAIAQHDIKKIIAYSTTSQLGLMVTAIGIGQPAL------------- 359
Cdd:TIGR00940 254 YLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGLGSPSYhyqgddskiyala 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 360 ---AFFHICTHAFFKAMLFLCSGSVIHSlSDEQDLRKMGGLSKLLPVTSACLILGSLALMGTPFLAGFYSKDLILEAT-G 435
Cdd:TIGR00940 334 avaAVFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAEAiT 412
|
330 340 350
....*....|....*....|....*....|....*....
gi 1476010405 436 ASVLNLLGV--------VLSLVATMLTAVYSFRIIFFCF 466
Cdd:TIGR00940 413 AHLVNPFDTvtlgylfpYVATVASVFTFVYSLRFIHGVF 451
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
106-459 |
1.10e-51 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 190.52 E-value: 1.10e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 106 LNISLNFIYDQYFLVFlsvALIVT---WSIMEFSFYYMAEDPNSNAFFRLLTIFLLNMLILTCSNSLFLIFLGWEGVGFL 182
Cdd:PRK12647 54 LGVNLSFLLDGLSLTF---ALLITgigTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSIT 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 183 SFLLISWWTTRNDASSSALEAVIYNRIGDIGLITFMALSALSFNSWNLTEILSSNN--DLTPLLPFLLFGLVLAAAGKSA 260
Cdd:PRK12647 131 SFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLASGDviREHPLYLAILLLVLGGAFTKSA 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 261 QFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFILVRTSDLFSLSPHAQSLVLILGGTTALFAASTAIAQHDIKKIIAYS 340
Cdd:PRK12647 211 QFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYS 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 341 TTSQLGLMVTAIGIGQPAL---AFFHICTHAFFKAMLFLCSGSVIHSlSDEQDLRKMGGLSKLLPVTSACLILGSLALMG 417
Cdd:PRK12647 291 TVSALGTLVMLLGLGSELAikaAVLFLVAHSLYKGALFMVAGIIDHE-TGTRDITKLGGLRRAMPITAAAALLAALSMAG 369
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 1476010405 418 TPFLAGFYSKDLILEAT-GASVLNLLGVVLSLVATMLTAVYSF 459
Cdd:PRK12647 370 LPPLFGFLAKELIYEALlEAPLWSLILTVAAVLGNALMVAVAF 412
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
166-447 |
3.46e-51 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 178.66 E-value: 3.46e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 166 SNSLFLIFLGWEGVGFLSFLLISWWTTRNDASSSALEAVIYNRIGDIGLITFMALSALSFNSWNLTEILS--SNNDLTPL 243
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKalTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 244 LPFLLFGLVLAAAGKSAQFGLHPWLPAA-MEGPTPVSALLhSSTMVVAGVFILVRTSDLFSL-SPHAQSLVLILGGTTAL 321
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPsSPFIQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 322 FAASTAIAQHDIKKIIAYSTTSQLGLMVTAIGIGQP---ALAFFHICTHAFFKAMLFLCSGSVIHSLSDEQDLRKMGGLS 398
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIygiQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1476010405 399 KLLPVTSACLILGSLALMGTPFLAGFYSKDLILEAT---GASVLNLLGVVLS 447
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAvaaSWIFLVLAGVVGS 291
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
138-464 |
1.03e-49 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 186.55 E-value: 1.03e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 138 YYMAEDPNSNAFFRLLTIFLLNMLILTCSNSLFLIFLGWEGVGFLSFLLISWWTTRNDASSSALEAVIYNRIGDIGLITF 217
Cdd:PRK12648 98 YYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHRADARRGARMALTVTGAGGLALLAG 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 218 MALSALSFNSWNLTEILSSNN--DLTPLLPFLLFGLVLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFIL 295
Cdd:PRK12648 178 VLLLGHIVGSYDLDVVLAAGDliRAHPLYPPALVLILLGAFTKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLL 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 296 VRTSDLFSLSPHAQSLVLILGGTTALFAASTAIAQHDIKKIIAYSTTSQLGLMVTAIGIGQP---ALAFFHICTHAFFKA 372
Cdd:PRK12648 258 ARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYSTISHLGLITLLLGLGSPlaaVAAIFHIINHATFKA 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 373 MLFLCSGSVIHSlSDEQDLRKMGGLSKLLPVTSACLILGSLALMGTPFLAGFYSKDLIL-EATGASVLNLLGVVLSLVAT 451
Cdd:PRK12648 338 SLFMAAGIIDHE-TGTRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLLNGFLSKEMFFaETLDTHLLGSLDWLLPVAAT 416
|
330
....*....|....*....
gi 1476010405 452 ---MLTAVYSFRII---FF 464
Cdd:PRK12648 417 lagAFSVAYSLRFIhdvFF 435
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
108-466 |
1.23e-47 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 175.49 E-value: 1.23e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 108 ISLNFIYDQYFLVFLSVALIVTWSIMEFSFYYMAEDPNSNAFFRLLTIFLLNMLILTCSNSLFLIFLGWEGVGFLSFLLI 187
Cdd:MTH00095 37 LSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLV 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 188 SWWTTRnDASSSALEAVIYNRIGDIGLITFMALSALSFNSWNLTEILSSnndltpllpFLLFGLVLAAAGKSAQFGLHPW 267
Cdd:MTH00095 117 LFYNNW-DSNSGAMNTALTNRIGDFFIFLFFSGFIFSSYYFFSFSFFSS---------SMILMLLLTSFTKSAQFPFSSW 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 268 LPAAMEGPTPVSALLHSSTMVVAGVFILVRTSDLFsLSPHAQSLVLILGGTTALFAASTAIAQHDIKKIIAYSTTSQLGL 347
Cdd:MTH00095 187 LPKAMSAPTPVSSLVHSSTLVTAGLILLMNFSYLI-LNMNVMKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGF 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 348 MVTAIGIGQPALAFFHICTHAFFKAMLFLCSGSVIHSLSDEQDLRKMGGLSKLLPVTSACLILGSLALMGTPFLAGFYSK 427
Cdd:MTH00095 266 SMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSK 345
|
330 340 350
....*....|....*....|....*....|....*....
gi 1476010405 428 DLILEATGASVLNLLGVVLSLVATMLTAVYSFRIIFFCF 466
Cdd:MTH00095 346 ELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFF 384
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
106-462 |
2.36e-46 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 175.71 E-value: 2.36e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 106 LNISLNFIYDQYFLVF-LSVALIVTWSIMEFSFYYMAEDPNSNAFFRLLTIFLLNMLILTCSNSLFLIFLGWEGVGFLSF 184
Cdd:PRK12646 68 LDINLDLRLDGLSLMFsLIISLIGIAVFFYATQYLSSRKDNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSF 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 185 LLISWWTTRNDASSSALEAVIYNRIGDIGLITFMALSALSFNSWNLTEILSSNNDLTP--LLPFLLFGLVLAAAGKSAQF 262
Cdd:PRK12646 148 LLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHIKNhgLFIPMIFMFLLGAFTKSAQF 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 263 GLHPWLPAAMEGPTPVSALLHSSTMVVAGVFILVRTSDLFSLSPHAQSLVLILGGTTALFAASTAIAQHDIKKIIAYSTT 342
Cdd:PRK12646 228 PFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTI 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 343 SQLGLMVTAIGIG-------QPALA----------FFHICTHAFFKAMLFLCSGSVIHSlSDEQDLRKMGGLSKLLPVTS 405
Cdd:PRK12646 308 SQLGMIMAMVGIGggyaqhqQDAIAsiyvfvlfaaLFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQLFPKMN 386
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1476010405 406 ACLILGSLALMGTPFLAGFYSKDLILEATGAS--------VLNLLGVVLSLVATMLTAVYSFRII 462
Cdd:PRK12646 387 LVMTIAALSMAGVPFLNGFLSKEMFLDALTQTgqlsqfslISMIIIVFIGVIASIFTFTYALYMV 451
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
125-466 |
1.41e-45 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 173.19 E-value: 1.41e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 125 ALIVTWSImefsFYYMAEDPNSNAFFRLLTIFLLNMLILTCSNSLFLIFLGWEGVGFLSFLLISWWTTRNDASSSALEAV 204
Cdd:PRK12645 92 SLVVLYSI----YYLSKKKEQLGNFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSM 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 205 IYNRIGDIGLITFMALSALSFNSWNLTEILSSNNDLTPLL--PFLLFGLVLAAAGKSAQFGLHPWLPAAMEGPTPVSALL 282
Cdd:PRK12645 168 LITVFGGLSMLGGFILLYIMTGSFSIREMIANADEIQNSPlfIPAMILILLGAFTKSAQFPFYIWLPDAMEAPTPVSAYL 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 283 HSSTMVVAGVFILVRTSDLFSLSPHAQSLVLILGGTTALFAASTAIAQHDIKKIIAYSTTSQLGLMVTAIGIGQPAL--- 359
Cdd:PRK12645 248 HSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIGAASLhyq 327
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 360 -------------AFFHICTHAFFKAMLFLCSGSVIHSlSDEQDLRKMGGLSKLLPVTSACLILGSLALMGTPFLAGFYS 426
Cdd:PRK12645 328 gddskiyaaaitaAIFHLINHATFKGSLFMIVGIVDHE-TGTRDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLS 406
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 1476010405 427 KDLILEAT------GASVLNLLGV---VLSLVATMLTAVYSFRIIFFCF 466
Cdd:PRK12645 407 KEMFFESMlnateaNLFSLDTWGVlfpVIAWVASVFTFVYSIIFIFKTF 455
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
100-463 |
2.25e-41 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 158.92 E-value: 2.25e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 100 WLSNTPLNISLNFIYDQYFLVFLSVALIVTWSIMEFSFYYMAEDPNSNAFFRLLTIFLLNMLILTCSNSLFLIFLGWEGV 179
Cdd:PRK07390 73 WLQVADLDLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALSDSLFFSYVLLEIL 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 180 GFLSFLLISWWTTRNDASSSALEAVIYNRIGDigLITFMALSALS--FNSWNLTE--ILSSNNDLTPLLPFLLFGLVLAA 255
Cdd:PRK07390 153 TLSTYLLVGFWYAQPLVVTAARDAFLTKRVGD--LLLLMGVVALSplAGTLNFSDlaAWAATANLDPLTATLLGLALIAG 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 256 -AGKSAQFGLHPWLPAAMEGPTPVSaLLHSSTMVVAGVFILVRTSDLFSLSPHAQSLVLILGGTTALFAASTAIAQHDIK 334
Cdd:PRK07390 231 pTGKCAQFPLHLWLDEAMEGPNPAS-ILRNSVVVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIK 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 335 KIIAYSTTSQLGLMVTAIGIGQPALAFFHICTHAFFKAMLFLCSGSVIHSLSDeQDLRKMGGLSKLLPVTSACLILGSLA 414
Cdd:PRK07390 310 RALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILTTIT-QDLTELGGLWSRMPATTLAFLVGSAG 388
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 1476010405 415 LMGTPFLAGFYSKDLILEATGASVLNLLGVVL---SLVATMLTAVysFRIIF 463
Cdd:PRK07390 389 LVALLPLGGFWALLRLADGLWAVSPWLVGVLLlvnALTAFNLTRV--FRLVF 438
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
132-462 |
1.72e-38 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 152.29 E-value: 1.72e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 132 IMEFSFYYMAEDPNSNAFFRLLTIFLLNMLILTCSNSLFLIFLGWEGVGFLSFLLISWWTTRNDASSSALEAVIYNRIGD 211
Cdd:PRK12649 96 IMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGG 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 212 -IGLITFMALSALSfNSWNLTEILSS-----NNDLTPLLPFLLFGLVLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSS 285
Cdd:PRK12649 176 lFMFAGFLLLHVIT-GTYDIATILQDselieNIKGHPLFLITLILIFIGAAAKSAQGPFYIWLPNAMEAPTPVSAFLHSA 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 286 TMVVAGVFILVRTSDLFSLSPHAQSLVLILGGTTALFAASTAIAQHDIKKIIAYSTTSQLGLMVTAIGIG---QPALAF- 361
Cdd:PRK12649 255 TMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTtyhEPGLGVa 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 362 ---FHICTHAFFKAMLFLCSGSVIHSLSdEQDLRKMGGLSKLLPVTSACLILGSLALMGTPFLAGFYSKDLILEAT---G 435
Cdd:PRK12649 335 aatFHLLNHATFKACLFLVAGIVAHEAA-TRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEMFYETSvemG 413
|
330 340 350
....*....|....*....|....*....|
gi 1476010405 436 ASVLNLLGVVLSLVATM---LTAVYSFRII 462
Cdd:PRK12649 414 ALIGGPFTIIIPAVAVLggvFTFAYSIKLI 443
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
145-459 |
3.02e-38 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 147.81 E-value: 3.02e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 145 NSNAFFRLLTIFLLNMLILTCSNSLFLIFLGWEGVGFLSFLLISWWTTRnDASSSALEAVIYNRIGDIGLITFMALSALS 224
Cdd:PRK06525 111 GTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQSP-KALRSALKALLITHIGSLGLYLAAATLFLQ 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 225 FNSWNLTEILSSNNDLTPLLPFLLFGlvlAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFILVRTSDLFSL 304
Cdd:PRK06525 190 TGTFALSALSGLHGSLKYLVFLGILF---AAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGP 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 305 SPHAQSLV-LILGGTTALFAASTAIAQHDIKKIIAYSTTSQLGLMVTAIGIG----QPAL--AFFHICTHAFFKAMLFLC 377
Cdd:PRK06525 267 IPHVIGYVgAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAilgsRLALegSIAYIFNHAFAKSLFFLV 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 378 SGSVIHSLSdEQDLRKMGGLSKLLPVTSACLILGSLALMGTPFLAGFYSKDLILEATGASVLNLLGVVLSLVATMLTAVY 457
Cdd:PRK06525 347 AGALSYSCG-TRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVLLLIESVA 425
|
..
gi 1476010405 458 SF 459
Cdd:PRK06525 426 SF 427
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
457-633 |
8.15e-34 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 127.28 E-value: 8.15e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 457 YSFRIIFFCFSLSPSIAPLSPIGEENSNLNSALLRLAMGTIASGWFFSNFVF-APPSFTVTSVTKGMPLIVTIIGIAALF 535
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFpKPPMMTMPLYLKLLALLVTILGLLLGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 536 V---SLIFFTSNYINSNTHSTTTLQWFFVDIAHSIITLFSFISSLFISSRtLDRGWQEEMGPQGIAQASTTLSKISQAGQ 612
Cdd:pfam06455 81 ElsnLSNKQLKKSLNFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQ-IDQGWSEKFGPQGIAKTLMTLSKIIQNSQ 159
|
170 180
....*....|....*....|.
gi 1476010405 613 IGLIKRYILSSMTSVLLIITV 633
Cdd:pfam06455 160 KGLIKIYLLSFLLWLLLLLLL 180
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
96-382 |
2.20e-32 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 131.36 E-value: 2.20e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 96 TLSLWLSNTPLNislnfiydqyfLVFLSVALIVTWSIMEFSFYYMAEDPNSNAFFRLLTIFLLNMLILTCSNSLFLIFLG 175
Cdd:PRK08168 60 PAAAWLEVSGLG-----------LVMAALVQLLGWVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAA 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 176 WEGVGFLSFLLISWWTTRNDASSSALEAVIYNRIGDIGLITFMALSALSFNSWNLTEILS--SNNDLTPLLPFLLFGLVL 253
Cdd:PRK08168 129 WAAISLALHRLLCFYPDRPFARLAAHKKFIADRLAELLLLAAAALAYLEVGSLSLSALWAhlAAQGASPSLQAAALLLVL 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 254 AAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGvFILVRTSDLFSLSPHAQSLVLILGGTTALFAASTAIAQHDI 333
Cdd:PRK08168 209 AVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVVNLGG-FVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISI 287
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 1476010405 334 KKIIAYSTTSQLGLMVTAIGIGQPALAFFHICTHAFFKAMLFLCSGSVI 382
Cdd:PRK08168 288 KVRLAWSTVAQMGFMLLECGLGLYELALLHLVAHSLYKAHAFLSASEAV 336
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
203-463 |
6.61e-32 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 130.09 E-value: 6.61e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 203 AVIYNRIGDIGlitfMALSALSFNSWNLTEILSSNNDLTPLLPFLLFGLVLAAAGKSAQFGLHPWLPAAM-EGPTPVSAL 281
Cdd:PRK12667 185 AFLYATFGTLN----MADLSAKIRGLSFPLTGGLAGNPPLALGVALALALWAFTIKAAIFPNHFWLPDAHpAAPSPVSAM 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 282 LhSSTMVVAGVFILVR--------TSDLFSLSPHAQSLVLILGGTTALFAASTAIAQHDIKKIIAYSTTSQLGLMVTAIG 353
Cdd:PRK12667 261 L-SGLVVNVGAYAIIRflytifgiSPSLIDFRAALSPILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIG 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 354 IGQP---ALAFFHICTHAFFKAMLFLCSGSVIHSlSDEQDLRKMGGLSKLLPVTSACLILGSLALMGTPFLAGFYSKDLI 430
Cdd:PRK12667 340 IGTQlglAAALFHIINHAIAKSLLFLASGVFIHA-AGTRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLL 418
|
250 260 270
....*....|....*....|....*....|...
gi 1476010405 431 LEATGASVLNLLGVVLsLVATMLTAVYSFRIIF 463
Cdd:PRK12667 419 FNALLESGFYLPALVL-LIASAISLVGYFRAWY 450
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
264-459 |
2.76e-30 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 126.54 E-value: 2.76e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 264 LHPWLPAAM-EGPTPVSALLhSSTMVVAGVFILVRTS-DLFslspHAQS-----LVLILGGTTALFAASTAIAQHDIKKI 336
Cdd:PRK06521 229 LHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVfDLL----GAPGwwwgvLVLALGAISAVLGVLYALAEHDLKRL 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 337 IAYSTTSQLGLMVTAIGI-------GQPALA-------FFHICTHAFFKAMLFLCSGSVIHSLSdEQDLRKMGGLSKLLP 402
Cdd:PRK06521 304 LAYSTIENIGIIFVGLGLamvfiayGMPLLAalaltaaLYHLLNHALFKSLLFLGAGAVLHATG-TRDMEKLGGLIRRMP 382
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1476010405 403 VTSACLILGSLALMGTPFLAGFYSKDLILEA------TGASVLNLL----GVVLSLVATMltAVYSF 459
Cdd:PRK06521 383 WTAWAFLIGCLAISALPPLNGFVSEWLLLQSllsspgLPQWGLKLAvpiaAAMLALTAAL--AAMCF 447
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
258-536 |
7.78e-30 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 123.14 E-value: 7.78e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 258 KSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFILVRTS-DLFSLSPhaqsLVLILGGTTALFAASTAIAQHDIKKI 336
Cdd:PRK07234 197 KGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCAlDVPGLDL----IVRIFGVGTALLGVLFALLEKDLKRM 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 337 IAYSTTSQLGLMVTAIGIGqpalAFFHIcTHAFFKAMLFLCSGsVIHSLSDEQDLRKMGGLSKLLPvtsacLILGSLALM 416
Cdd:PRK07234 273 LAFSTISQLGFILAAPLVG----GLYAL-AHGLVKSTLFLCAG-ALPSRNFTELISQMLGIGKWIP-----LTMASFSIA 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 417 GTPFLAGFYSKDLILEatgasvlNLLG--VVLSLVATMLTAVYSFRIIFFCFSLSPSIAPLSPigeenSNLNSALLRLAM 494
Cdd:PRK07234 342 GFPLLAGFVSKVLTLK-------NLLPwqAIALNLAAVGTAASFWKFIFLPFSADDEDKKPLP-----GFWNAIALLLGG 409
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 1476010405 495 GTIASGWFFsnfvfapPSFTVTSVTKgmPLIVTIIGIAALFV 536
Cdd:PRK07234 410 LFLANGVYT-------EAYTLGNILK--ALLTIGLGWLPYFL 442
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
254-518 |
9.73e-30 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 123.07 E-value: 9.73e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 254 AAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFILVRTSDL-----FSLSPHAQSLVLILGGTTALFAASTAI 328
Cdd:PRK08375 211 ALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTvfggdFRFALGLGWLLAVLALLSMLVGSLAAL 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 329 AQHDIKKIIAYSTTSQLGLMVTAIGIGQPAL---AFFHICTHAFFKAMLFLCSGSVIHSlSDEQDLRKMGGLSKLLPVTS 405
Cdd:PRK08375 291 GQDDVKRVLAYSTVSQMGYILLGLALLTPLAlaaGLLHLLHHALMKGALFLAAGAIEVT-YGTRRLSELSGLGRRMPLTA 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 406 ACLILGSLALMGTPFLAGFYSKDLILEATgASVLNLLGVVLSLVATMLTAVYSFRIIFFCFSLSPSIAPLSPIGEENSNL 485
Cdd:PRK08375 370 AAFAVASLSLIGVPPTSGFVSKWYLVVGA-VEAGQWLVLAVLLASSLLALLYFLRIWYRAFFGPPPPGSEAPKQEAPLGM 448
|
250 260 270
....*....|....*....|....*....|...
gi 1476010405 486 NSALLRLAMGTIASGwffsnfVFAPPSFTVTSV 518
Cdd:PRK08375 449 LAPSLALALLSLLLG------IYAGPLLQLADA 475
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
124-466 |
1.37e-27 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 117.12 E-value: 1.37e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 124 VALIVTWSIMEFSFYYMAEDPNSNAFFRLLTIFLLNMLILTCSNSLFLIFLGWEGVGFLSFLLISWWTTRNDASSSALEA 203
Cdd:PRK08376 98 IATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKY 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 204 VIYNRIGDIGLITFMALSALSFNSWNLTEILSSNNDLTPLLPFLLFGLVLAA-AGKSAQFGLHPWLPAAM-EGPTPVSAL 281
Cdd:PRK08376 178 MFVGSLASSMVLLGIALLYGQYGTLNMAYLAVKMSENPTVVAKIALALFIAGlAMKSGAVPVHMWLPDAYpAAPSSISAM 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 282 LHSSTmvVAGVFILVRTsdLFSL-SPHAQS-----LVLILGGTTALFAASTAIAQHDIKKIIAYSTTSQLGLMVTAIGIG 355
Cdd:PRK08376 258 LLVIK--QAGLYALARV--LFSIyGPAINLatvgwVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMLLGLGVG 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 356 QPAL---------------AFFHICTHAFFKAMLFLCSGSVIHSLSdEQDLRKMGGLSKLLPVTSACLILGSLALMGTPF 420
Cdd:PRK08376 334 LAALgdpamasygeialagGIYHIVNHALYKALLFLTAGAVIYETG-TRNLNELGGLARTMPKTTIAFLIGAAAIVGLPP 412
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 1476010405 421 LAGFYSKDLILEATGAsvLNLLGVVLSLVATMLTAVYSFRIIFFCF 466
Cdd:PRK08376 413 FNGFASKWLIYESSAL--FNPILGVIAMIGSVLTLASFVKVFHTAF 456
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
100-471 |
9.71e-27 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 114.14 E-value: 9.71e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 100 WLSNTPLNISLNFIYDQYFLVFLSVALIVTWSIMEFSFYYMAE---DPNSNAFFRLLTIFLLNMLILTCSNsLFLIFLGW 176
Cdd:PRK06589 67 FELMDFGNYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAInniDSSSRFLFFFNLTILIGVLIALSSD-LFTMFVCY 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 177 EGVGFLSFLLISWwtTRNDASSSALEAVIyNRIGDIGLITFMALSALSFNSWNLTEILSSNNdLTPLLPFLLFGLVLAAA 256
Cdd:PRK06589 146 ELLTISTAFLIGH--TRNNISLSGGYKYL-KILMISALLLFLPAVILIYTKTGNLDFVSGGL-FSKNQSIILLLMFIYGI 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 257 GKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFILVRTSDLFSLSPHAQSLV------LILGGTTALFAASTAIAQ 330
Cdd:PRK06589 222 AKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFaefnwlIFIPIVSIFYSSLKALKT 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 331 HDIKKIIAYSTTSQLGLMVTAIGIGQP---ALAFFHICTHAFFKAMLFLCSGSvIHSLSDEQDLRKMGGLSKLLPVTSAC 407
Cdd:PRK06589 302 DNIKKILAYSTISQLSLALLSAFILTPkalGAAILHLVSHSFAKICLFYSMGS-IYSLKKEDQVDKLHGTSKSFPLISFI 380
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1476010405 408 LILGSLALMGTPFLAGFYSKDLILEATGASVLNLLGVVLSLV---ATMLTAVYSFRIIFFCFSLSPS 471
Cdd:PRK06589 381 ISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLVviaSSILSALYLLKILSSIYKPSLS 447
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
118-460 |
9.68e-26 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 110.94 E-value: 9.68e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 118 FLVFLsvALIVTWSIMEfsfyymaedPNSNAFFRLLTIFLLNMLILTCSNSLFLIFLGWEGVGFLSFLLISWWTTRNDaS 197
Cdd:COG1008 93 LLTPL--AILASWNEIK---------KRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGGERR-I 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 198 SSALEAVIYNRIGdiGLITFMALSALSFNSWNLT---EILSSNNDLTPLLPFLLFGLVLAAAGKSAQFGLHPWLP-AAME 273
Cdd:COG1008 161 YAAIKFFLYTLAG--SLLMLVAILALYFLAGALTfdiAELAAAPLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPdAHVE 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 274 GPTPVSALLhSSTMVVAGVFILVRtsdlFSL------SPHAQSLVLILGGTTALFAASTAIAQHDIKKIIAYSTTSQLGL 347
Cdd:COG1008 239 APTAGSVLL-AGVLLKMGGYGLLR----FALplfpeaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGF 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 348 MVTAIGIGQP-AL--AFFHICTHAFFKAMLFLCSGSVIHSLSDeQDLRKMGGLSKLLPVTSACLILGSLALMGTPFLAGF 424
Cdd:COG1008 314 VLLGIFALNPlGLqgAVLQMVSHGLITAALFLLVGVLYDRTHT-RDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGF 392
|
330 340 350
....*....|....*....|....*....|....*.
gi 1476010405 425 YSKDLILeaTGASVLNLLGVVLSLVATMLTAVYSFR 460
Cdd:COG1008 393 VGEFLVL--LGAFQVNPWLAILAALGLILTAAYLLW 426
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
261-462 |
4.39e-25 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 109.09 E-value: 4.39e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 261 QFGLHPWLPAAMEG-PTPVSALLhSSTMVVAGVFILVRTSDLFSLSPHAQS---LVLILGGTTALFAASTAIAQHDIKKI 336
Cdd:PRK08377 222 LFPLNAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNANGWSSvlkLVIIMATLTVFFAELSALRQKNVKRM 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 337 IAYSTTSQLGLMVTAIGIGQPA---LAFFHICTHAFFKAMLFLCSGSVIHSLSDEQdLRKMGGLSKLLPVTSACLILGSL 413
Cdd:PRK08377 301 IAYSSIGQVGMIALALALGTQAgvdAGVFHMINHAIVKALLFLAVGYVGITLGGTE-IEKFEGLGKRMPLTALALTIGAL 379
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1476010405 414 ALMGTPFLAGFYSKDLILEAtGASVLNLLGVVLSLVATMLTAVYSFRII 462
Cdd:PRK08377 380 STVGIPLFNVFWSKFRIILA-GLSAGYTWPVALVLGASVVEAVYYFRLI 427
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
101-472 |
2.06e-24 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 107.27 E-value: 2.06e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 101 LSNTPLNISLNFIYDQYFLVFLSVALIVTWSIMEFSFYYMAEDPNSNAFFRLLTIFLLNMLILTCSNSLFLIFLGWEGVG 180
Cdd:MTH00063 30 LSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNKLIVLFVLVMGILVLTGDFLSTLIFWEYLG 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 181 FLSFLLISWWTTrNDASSSALEAVIYNRIGDIGLITFMALSALSFNSWnlteilssnndltpllPFLLFGLVLAAAGKSA 260
Cdd:MTH00063 110 VVSFFLILFYDN-FLSLRASVVTLVSSRFGDVCLFLLIGLSCWGGSGS----------------FLCCLFFFLIVFTKSA 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 261 QFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFILVRTSDLFSLSPhAQSLVLILGGTTALFAASTAIAQHDIKKIIAYS 340
Cdd:MTH00063 173 SFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSW-LSIFFSVLLLLTIFITGVSSLFFSDLKKIVALS 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 341 TTSQLGLMVTAIGIGQPALAFFHICTHAFFKAMLFLCSGSVIHSLSDEQD-----LRKMGGLSklLPVTSACLILGslaL 415
Cdd:MTH00063 252 TCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSsncvySSILYGSW--NLFYLFLLVLG---L 326
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 1476010405 416 MGTPFLAGFYSKDLILEATGASVLNLLGVVLSLVATMLTAVYSFR--IIFFCFSLSPSI 472
Cdd:MTH00063 327 SGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRlcLILFGVKSSLSS 385
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
89-466 |
1.04e-23 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 105.85 E-value: 1.04e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 89 GFTEINITLSLWLsnTPLNISLNFIYDQYFLVFLSVALIVTWSIMEFSFYYMAEdpNSNAFFRLLTIFLLNMLILTCSNS 168
Cdd:PRK08668 44 FTLKVGTGEKLTL--FFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTK--NDAYFNMFALMSLAGVLGVFLAND 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 169 LFLIFLGWEGVGFLSFLLISWWTTRNDAsssalEAVIYNRIGDIGliTFMALSAL-----SFNSWNLTEILSSNNDLTPL 243
Cdd:PRK08668 120 LLTLYIFWEIMTFSSFMMVPMGKKESRK-----ASLKYFVLSAIG--AYAMLYAIfliyaKTGTFDFADISQGLINDTST 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 244 LPFLLFGLVLAAAG--KSAQFGLHPWLPAAM-EGPTPVSALLhSSTMVVAGVFIL------VRTSDLFSLSPHAQSLVLI 314
Cdd:PRK08668 193 GFALIVFLFLLAFGvaKAGIFPLHVWAPDAYsEAPQSFSAVL-SGQLSKLGAYGFllvlyvLPGTKLFSEFGTYRGVPLF 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 315 ------LGGTTALFAASTAIAQHDIKKIIAYSTTSQLGLMVTAIGIGQP---ALAFFHICTHAFFKAMLFLCSGSVIHSl 385
Cdd:PRK08668 272 nyilawLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSlgfAGGLFHVFNHALFKGLFFLIFAAVIYR- 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 386 SDEQDLRKMGGLSKLLPVTSACLILGSLALMGTPFLAGFYSKDLILEATGASVLNLLGvVLSLVATMLTAVYSFRIIFFC 465
Cdd:PRK08668 351 TGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITA-FMAFFGSIGSFLYVFRPLAGV 429
|
.
gi 1476010405 466 F 466
Cdd:PRK08668 430 F 430
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
152-450 |
1.87e-23 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 105.20 E-value: 1.87e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 152 LLTIFLLNMLILTCSNSLFLIFLGWEGVGFLSFLLIswwTTRNDASSSALEAVIYNRIGDIGLItFMALSALSFNSWNLT 231
Cdd:PRK08667 116 LTALFILSMLGVVASANTFSFLFFWEIMALSSFFLV---MNDYQEEETQRAGIFYFVMTQLSTV-FLMLGIIVLFIQTGS 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 232 EILSSNNDLTPLLPFLLFGLVLAAAGKSAQFGLHPWLPAAMEG-PTPVSALLhSSTMVVAGVFILVR-TSDLFSLSPHAQ 309
Cdd:PRK08667 192 FELSPLGASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPAsPSNVSALM-SGVMLKVAVYGLVRfLMDVLSPELWWG 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 310 SLVLILGGTTALFAASTAIAQHDIKKIIAYSTTSQLGLMVTAIGI-------GQPALAF-------FHICTHAFFKAMLF 375
Cdd:PRK08667 271 VLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLyvifgvyGLDTLALlalggalFHSLNHALFKSLLF 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 376 LCSGSVIHSLSDeQDLRKMGGLSKLLPVTSACLILGSLALMGTPFLAGFYSKDLILEA-------TGASVLNLLGVVLSL 448
Cdd:PRK08667 351 LTAGSVVHATGT-RNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESffqsfsvADPLIKILLFSVLAI 429
|
..
gi 1476010405 449 VA 450
Cdd:PRK08667 430 FA 431
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
85-453 |
2.18e-23 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 103.86 E-value: 2.18e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 85 TINAGFTEINITLSLWLSNTPLNISLNFIYDQYFLV------FLSVALIVTWSIMEFSFYYMAED--------PNSNAFF 150
Cdd:PRK06458 32 TLNVLGITLTLILALWLVFTVPDAGEIFAAGLWFFIddlnvfFLALIGVVGFLTSLYSIGYMRHEvehgelspVTLRLYY 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 151 RLLTIFLLNMLILTCSNSLFLIFLGWEGVGFLSFLLISWWTTRndassSALEAVI-YNRIGDIGL--------ITFMALS 221
Cdd:PRK06458 112 GMYQLFLFTMLLALTSNNLGLMWVAIEATTLSSALLVGIYRTR-----ASLEAAWkYIIICSVGVafalfgtiLVYANAA 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 222 ALSFNSWN---LTEILSSNNDLTPLLPFLLFGLVLAAAG-KSAQFGLHPWLP-AAMEGPTPVSALLHSSTMVVAgVFILV 296
Cdd:PRK06458 187 TVMGDGEMailWTELLKHASLLDPTLMKLAFVFLLIGFGtKVGLFPMHAWLPdAHSEAPSPVSALLSGVLLNVA-LYAVL 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 297 RTSDLFSLSPHA---QSLVLILGGTTALFAASTAIAQHDIKKIIAYSTTSQLGLMVTAIGIGQPaLAFF----HICTHAF 369
Cdd:PRK06458 266 RYYILIDAAIGSdfpGRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGP-LGIFaallHMLNHSL 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 370 FKAMLFLCSGSVIHSlSDEQDLRKMGGLSKLLPVTSACLILGSLALMGTPFLAGFYSKDLILEATGAS------VLNLLG 443
Cdd:PRK06458 345 TKSAIFFASGNVLQK-YGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGLARgplliaILLLLL 423
|
410
....*....|
gi 1476010405 444 VVLSLVATML 453
Cdd:PRK06458 424 LTLAFAALVR 433
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
117-459 |
1.04e-21 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 98.86 E-value: 1.04e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 117 YFLVFLSvALIVTWSIMefsFYYMAEDPNSNAFFRLLTIFLLNMLILTCSNSLFLIFLGWEGVGFLSFLLISWWTtRNDA 196
Cdd:TIGR01972 80 LLLVLLT-ALLTLLAIL---ASWESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWG-GPNR 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 197 SSSALEAVIYNRIGDI-GLITFMALSALSFNSWNLTEILSsNNDLTPLLPFLLFGLVLAAAGKSAQFGLHPWLPAAM-EG 274
Cdd:TIGR01972 155 IYAAMKFFLYTLAGSLlMLLAILGLYFLGGGTFDLLELLN-LPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHvEA 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 275 PTPVSALLHSSTMVVAGVFILVRTSDLF-SLSPHAQSLVLILGGTTALFAASTAIAQHDIKKIIAYSTTSQLGLMVTAIG 353
Cdd:TIGR01972 234 PTAGSVILAGVLLKMGTYGFLRFNLPLFpDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIF 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 354 IGQP---ALAFFHICTHAFFKAMLFLCSGsVIHSLSDEQDLRKMGGLSKLLPVTSACLILGSLALMGTPFLAGFYSKDLI 430
Cdd:TIGR01972 314 SFNElgiSGAVFQMISHGLITAALFLLVG-VLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLI 392
|
330 340
....*....|....*....|....*....
gi 1476010405 431 LeaTGASVLNLLGVVLSLVATMLTAVYSF 459
Cdd:TIGR01972 393 L--LGSFKVNPVVAFLAALGIVLAAAYML 419
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
172-450 |
1.60e-21 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 98.81 E-value: 1.60e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 172 IFLGWEGVGFLSFLLIswWTTRNDASSSA-LEAVIYNRIGDIGLITFMALSALSFNSWNLTEILSSNNdltpllpfllFG 250
Cdd:PRK12668 118 LFVFWELMAFTSTFLV--WARGTKAAVRAgFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIAGLGG----------TA 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 251 LVLAAAG---KSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFILVRTsdlfslspHAQSLVLI-LGGTTALFAAST 326
Cdd:PRK12668 186 AWLILIGfgvNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARA--------FPGTELLIyIGAAMAVYGVFF 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 327 AIAQHDIKKIIAYSTTSQLGLMVTAIGIGQP-AL--AFFHICTHAFFKAMLFLCSGSVIHSLSdEQDLRKMGGLSKLLPV 403
Cdd:PRK12668 258 ALLENDLRRLLSYHIVSQVGYMVAGIGIGTAlAIngAVAHAFNHILYKGLLFMSAGAVLYRTG-TEKLTELGGLYRSMPL 336
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 1476010405 404 TSACLILGSLALMGTPFLAGFYSKDLILEATGASVLNLLGVVLSLVA 450
Cdd:PRK12668 337 TALFCLVGALSISAFPLFSGFVSKSMIISAAGEDHYVWVWLLLLLAS 383
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
95-462 |
3.19e-20 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 94.03 E-value: 3.19e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 95 ITLSLWLSNTPLNISLNFIYDQYFLVFLSVALIVTWSIMEFSFYYMAEDPNSNAFFRLLTIF-LLNMLILTCSNSLFLIF 173
Cdd:COG1007 49 LLLLALGGGTGTAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFaTLGMMLMASANDLLTLF 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 174 LGWEGVGFLSFLLISWwtTRNDASSSalEAVI-YNRIGDI--GLITF-MALSALSFNSWNLTEILSSNNDLTPLLPFLLF 249
Cdd:COG1007 129 LGLELLSLSLYVLVAF--RRDDRRSS--EAALkYFLLGALssGFLLYgISLLYGATGSLNLAGIAAALAAGGANSPLLLL 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 250 GLVLAAAG---KSAQFGLHPWLPAAMEG-PTPVSALLhSSTMVVAGVFILVR--TSDLFSLSPHAQSLVLILGGTTALFA 323
Cdd:COG1007 205 GLVLVLAGlafKLSAVPFHMWTPDVYEGaPTPVTAFL-ATAPKIAAFAALLRllVEAFPGLAADWQLLLAVLAVLSMTVG 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 324 ASTAIAQHDIKKIIAYSTTSQLGLMVTAIGIGQP---ALAFFHICTHAFFKAMLFLCSGSVIHSLSDEQDLRKMGGLSKL 400
Cdd:COG1007 284 NLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPlgvSAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARR 363
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1476010405 401 LPVTSACLILGSLALMGTPFLAGFYSKDLILEATGASVLNLLgVVLSLVATMLTAVYSFRII 462
Cdd:COG1007 364 SPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWL-AVIAVLNSVISAYYYLRVV 424
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
256-463 |
9.19e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 89.62 E-value: 9.19e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 256 AGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFILVRTSDLF--SLSPHAQSLVLILGGTTALFAASTAIAQHDI 333
Cdd:PRK07691 220 ATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFfsHDTSFTHYLILILALLTIIFGVIGAVAYFDI 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 334 KKIIAYSTTSQLGLMVTAIGIGQPAL---AFFHICTHAFFKAMLFLCSGSVIHsLSDEQDLRKMGGLSKLLPVTSACLIL 410
Cdd:PRK07691 300 KKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKRYPVLGWMFFI 378
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1476010405 411 GSLALMGTPFLAGFYSKDLILEATGASVLNLLGVVLSLVAtmLTAVYSFRIIF 463
Cdd:PRK07691 379 AALSLAGIPPLSGFYGKFFIVEGTFEAGFYVSGIIVLLSS--LLVLYSVIKIF 429
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
264-448 |
1.33e-16 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 83.34 E-value: 1.33e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 264 LHPWLPAAMEGPTPVSALLHSSTMVVAGVFILVRTSDLFSLSP-HAQSLVLILGGTTALFAASTAIAQHDIKKIIAYSTT 342
Cdd:PRK08042 199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSLLGGNAPlWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTL 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 343 SQLGLM-------VTAIGIGQPAL-------AFFHICTHAFFKAMLFLCSGSVIHSlSDEQDLRKMGGLSKLLPVTSACL 408
Cdd:PRK08042 279 ENIGIIllglgagVTGIALEQPALialglvgGLYHLLNHSLFKSVLFLGAGSVWFR-TGHRDIEKLGGIGKKMPVISIAM 357
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1476010405 409 ILGSLALMGTPFLAGF------YSKDLILEATGASVLNLLGVVLSL 448
Cdd:PRK08042 358 LVGLMAMAALPPLNGFagewviYQSFFKLSNSGAFVARLLGPLLAV 403
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
254-516 |
1.45e-16 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 82.69 E-value: 1.45e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 254 AAAGKSAQFGLHpWLPAAMEGPTPVSALLHSSTMVVAGVFILVR-TSDLFSLSPHAQSLVL-ILGGTTALFAASTAIAQH 331
Cdd:PRK12663 216 AFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRvFTLLFPQERELLHPLLaTMAAITMVIGALGALAYK 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 332 DIKKIIAYSTTSQLGLMVTAIGIGQPAL---AFFHICTHAFFKAMLFLCSGSVIHsLSDEQDLRKMGGLSKLLPVTSACL 408
Cdd:PRK12663 295 DIRRIAGYQVISSIGFILLGLALGTPAGingAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQYLGGLYRKEPLFGALF 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 409 ILGSLALMGTPFLAGFYSKDLILEA---TGASVLNLLGVVLSLVATmltavYSFRIIFFCFSLSPSIAPLSPIGEENSNL 485
Cdd:PRK12663 374 LILIFAIGGLPPFSGFWGKVLLVQGaldNGAYILLALMLITSLITM-----YSLFRIFFLAYWGDKDGEEVNFKPIPLYR 448
|
250 260 270
....*....|....*....|....*....|.
gi 1476010405 486 NSALLRLAMGTIASGwffsnfVFAPPSFTVT 516
Cdd:PRK12663 449 KLPLSILAVVVIAMG------IAAEPLLNLT 473
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
112-507 |
1.66e-16 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 82.56 E-value: 1.66e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 112 FIYDQYFLVFLSVALIVTWSIMEFSFYYMAEDPNSNaFFRLLTIFLLNMLILTCSNSLFLIFLGWEGVGFLSFLLISwwt 191
Cdd:PRK05777 69 LVVDGFALFLKGLILLASLLALLLARPYLEDRGRGE-FYLLVLFALLGMMVMVSANDLLTLFLGLELLSLPLYALAA--- 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 192 TRNDASSSALEAVIYNRIGDI--GLITF-MALSALSFNSWNLTEILSSNNDLTPLLPFLLFGLVLAAAG---KSAQFGLH 265
Cdd:PRK05777 145 LRRDRRRSLEAAIKYFVLGALasGFLLYgMSLLYGATGSLSFAGIAKALADGSGNSLLLLFGLVFLLVGlafKLSAVPFH 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 266 PWLPAAMEG-PTPVSALLHSSTMVVA-GVFILVRTSDLFSLSPHAQSLVLILGGTTALFAASTAIAQHDIKKIIAYSTTS 343
Cdd:PRK05777 225 MWTPDVYEGaPTPVTAFLATAPKIAAfAVLLRLLVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIA 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 344 QLGLMVTAIGIGQP---ALAFFHICTHAFFKAMLFLCSGSVIHSLSDEQDLRKMGGLSKLLPVTSACLILGSLALMGTPF 420
Cdd:PRK05777 305 HAGYLLVGLAAGTAegySAVLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPP 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 421 LAGFYSKDLILEAT---GASVLNLLGVVLSLVAtmltAVYSFRIIFFCFSLSPSIAPlsPIGEENSNLNSALLRLAMGTI 497
Cdd:PRK05777 385 TAGFWGKFYVFEAAveaGLWWLAVIGVLNSAIG----AFYYLRVIKLMYFDEPPRDA--PVNWPLSAGGAVLSVSALLVL 458
|
410
....*....|
gi 1476010405 498 ASGWFFSNFV 507
Cdd:PRK05777 459 VLGIFPQPLL 468
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
145-458 |
3.29e-16 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 81.79 E-value: 3.29e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 145 NSNAFFRLLTIFLLNMLILT-CSNSLFLIFLGWEGVGFLSFLLISWWTtRNDASSSALEAVIYNRIGD-IGLITFMALSA 222
Cdd:PRK05846 108 KRVKFYMAALLWLEGGVIGVfAALDLLLFYVFFEAMLIPMYFLIGVWG-GKNRIYAATKFFLYTLLGSlLMLVAIIYLVV 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 223 LSFN---SWNLTEILSSNNDLTPLLPFLLFGLVlAAAGKSAQFGLHPWLP-AAMEGPTPVSALLhSSTMVVAGVFILVRT 298
Cdd:PRK05846 187 VYYNatgTFDIADLLNLPLPPGVQYWLFLAFFI-AFAVKMPMFPLHTWLPdAHVQAPTAGSVLL-AGILLKMGAYGLLRF 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 299 S-DLFSLSPH-AQSLVLILGGTTALFAASTAIAQHDIKKIIAYSTTSQLGLMVTAIGIG-QPAL--AFFHICTHAFFKAM 373
Cdd:PRK05846 265 SlPLFPDASHeFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFAGnQLGIqgAIFQMISHGLSSAA 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 374 LFLCSGSVIHSLSDEqDLRKMGGLSKLLPVTSACLILGSLALMGTPFLAGFYSKDLILeaTGASVLNLLGVVLSLVATML 453
Cdd:PRK05846 345 LFLLVGVLYDRLHTR-DIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLIL--LGSFQVNPVIAFIATTGLIL 421
|
....*
gi 1476010405 454 TAVYS 458
Cdd:PRK05846 422 AAVYS 426
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
256-464 |
6.07e-16 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 80.95 E-value: 6.07e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 256 AGKSAQFGLHPWLPAA-MEGPTPVSALLhSSTMVVAGVFILVRTSDLFSLS---PHAQSLVLILGGTTALFAASTAIAQH 331
Cdd:PRK08676 217 LAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRQSgaaEQFSNVLIGLGIFSIAVAAFSMLSQR 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 332 DIKKIIAYSTTSQLGLMVTAIGIGQPALAF---FHICTHAFFKAMLFLCSGsVIHSLSDEQDLRKMGGLSKLLPVTSACL 408
Cdd:PRK08676 296 NLKKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFRLQPVAAWGV 374
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1476010405 409 ILGSLALMGTPFLAGFYSKDLILEATGASVLNLLGVVLSLVATMLTAVYSFRIIFF 464
Cdd:PRK08676 375 ILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSFAIFLLKAF 430
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
126-382 |
5.50e-14 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 74.69 E-value: 5.50e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 126 LIVTWSIMEFSFYYMAEDPNSNAFFRLLTIFLLNMLILTCSNSLFLIFLGWEGVGFLSFLLISWWTTRNDASSSALEAVI 205
Cdd:PRK08601 82 LTLGFIIQRFSVRYLLGDRSYRKYFALFTFTTGFASLAWLSGDLRLMALCWGATLLGLTLLIGLNKGWKVAREAAKISGM 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 206 YNRIGDIGLITFMALSALSFNSWNLTEILSSNNDLTPLL---PFLLFGLVLAAAGKSAQFGLHPWLPAAMEGPTPVSALL 282
Cdd:PRK08601 162 LFLISWLALALAIVWLFIATGEWQLTSVLSNENLAQLGTwekTGINLLLILAVMIPAAQWPFQRWLIESAVAPTPVSAIM 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 283 HSStMVVAGVFILVRTSDLFSlSPHAQSLVLILGGTTALFAASTAIAQHDIKKIIAYSTTSQLGLMVTAIGIGQPALAFF 362
Cdd:PRK08601 242 HAG-LVNAGGIMLTRFSPLFH-DDIAQILLLIFASISVLIGTGISLVQVDYKRQLVGSTMAQMGFMLVQCALGAYSAAII 319
|
250 260
....*....|....*....|
gi 1476010405 363 HICTHAFFKAMLFLCSGSVI 382
Cdd:PRK08601 320 HLILHGLFKATLFLQSGSAV 339
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
278-463 |
6.81e-14 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 74.30 E-value: 6.81e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 278 VSALLH--SSTMVVAGVFILVRTSDLFSLSPHAQSLVLILGGTTALFAASTAIAQHDIKKIIAYSTTSQLGLMVTAIGIG 355
Cdd:PRK06277 233 GSALLQtfSKFVLVALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALG 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 356 QP---ALAFFHICTHAFFKAMLFLCSGSVIHsLSDEQDLRKMGGLSKLLPVTSACLILGSLALMGTPFLAGFYSKDLILE 432
Cdd:PRK06277 313 TPlgiVAGIFHAINHVIYKSALFLGAGIVSY-RTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQ 391
|
170 180 190
....*....|....*....|....*....|...
gi 1476010405 433 ATGASVLNLLGVVLSLV--ATMLTAVYSFRIIF 463
Cdd:PRK06277 392 AAMQANMPELAIIMIIVsiGTFVSMMKAFYLIY 424
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
169-457 |
6.86e-14 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 74.35 E-value: 6.86e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 169 LFLIFLGWEGVGFLSFLLISWW--TTRNDASSSALeavIYNRI-GDIGLITFMALSALSFNSWNLTEILSSNNDLTPLLP 245
Cdd:PRK06473 129 LLLFFLFYELELIPLYLLIAIWggQRRGYAATKFL---LYTAIsGILILVSFLGLVWLSGASSFDYEPLRSHTLPLSTQL 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 246 FLLFGLVLAAAGKSAQFGLHPWLP-AAMEGPTPVSALLhsstmvvAGVFILVRTSDLF----SLSPHAQSLV----LILG 316
Cdd:PRK06473 206 LLLAPILVGFGIKIPLVPFHTWLPdAHVEASTPVSVLL-------AGVLLKLGTYGLLrfgvGLFPEAWVYLapwlATWA 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 317 GTTALFAASTAIAQHDIKKIIAYSTTSQLGLMVTAIGIGQP---ALAFFHICTHAFFKAMLFLCSGsVIHSLSDEQDLRK 393
Cdd:PRK06473 279 VVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPlsiLAAVFQMISHGLISALLFLLVG-VVYKKTGSRDVDV 357
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1476010405 394 MGGL---SKLLPVTSACLILGSLALMGTPFLAGFYSKDLILEatGASVLNLLGVVLSLVATMLTAVY 457
Cdd:PRK06473 358 LRGLlnpERGLPITGSLMILGVMASAGIPGMVGFIAEFLVFR--GSFPIFPVQTLLCMIGTGLTAVY 422
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
169-457 |
1.21e-13 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 73.59 E-value: 1.21e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 169 LFLIFLGWEGVGFlsFLLISWWTTRNDASSSaLEAVIYNRI-GDIGLITFMALSALSFNSWNLTEILSSNNDLTPLLPFL 247
Cdd:PRK07363 131 LFFLFYELELIPF--YLLIAIWGGEKRGYAS-IKFLIYTAVsGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLNTQLIL 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 248 LFGLVLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFILVRTSdlFSLSPHAQSLV----LILGGTTALFA 323
Cdd:PRK07363 208 LTGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFG--LQLFPQTWSLVapglAIIGTISVIYG 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 324 ASTAIAQHDIKKIIAYSTTSQLGLMVTAIGIGQPAL---AFFHICTHAFFKAMLFLCSGsVIHSLSDEQDLRKMGGLS-- 398
Cdd:PRK07363 286 ALSAIAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSllgAVAQMISHGLILALLFHLVG-IVERKVGTRDLDVLNGLMnp 364
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 399 -KLLPVTSACLILGSLALMGTPFLAGFYSKDLILEATGASVlnLLGVVLSLVATMLTAVY 457
Cdd:PRK07363 365 iRGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQGSFSTF--PIPTLLCIVASGLTAVY 422
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
258-454 |
6.33e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 71.54 E-value: 6.33e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 258 KSAQFGLHPWLPAAM-EGPTPVSA----LLhssTMVvaGVFILVRTSDLFSLSPHAQSLVLILGGTTALFAASTAIAQHD 332
Cdd:PRK12665 222 KAAVFPLSFWLPDSYpTAPAPVTAvfagLL---TKV--GVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVGILGAIAQSD 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 333 IKKIIAYSTTSQLGLMVTAIGIGQP---ALAFFHICTHAFFKAMLFLCSGsVIHSLSDEQDLRKMGGLSKLLPVTSACLI 409
Cdd:PRK12665 297 IKRLLSFTLVSHIGYMVFGIALSTVaglSGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASPLLAVLFF 375
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1476010405 410 LGSLALMGTPFLAGFYSKDLILEATGA--SVLNLLGVVLSLVATMLT 454
Cdd:PRK12665 376 VPALNLGGIPPFSGFIGKVALLEAGAEdgTWLAWALVAGGVVTSLLT 422
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
258-462 |
1.51e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 70.15 E-value: 1.51e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 258 KSAQFGLHPWLPAAM-EGPTPVSALLH-SSTMVVAGVFIL----VRTSDLFSLSPHAQSLVLILGGTTALFAASTAIAQH 331
Cdd:PRK12662 222 KAALFPFHKWLIQAYsEAPSFISVFFSgTSTKVMIYLIIRivydVFKANFVFTTLPFNNVFMILAALAIVFGSVLAILSK 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 332 DIKKIIAYSTTSQLGLMVTAIGIGQP---ALAFFHICTHAFFKAMLFLCSGSVIHSLsDEQDLRKMGGLSKLLPVTSACL 408
Cdd:PRK12662 302 DIKRIFAYSSISHIGYIILAVSLNTYyglAAAVAYIVNHSIVKSALFMVSGSISYHF-GTTKLEDCLNLWKSMPKITLAF 380
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 1476010405 409 ILGSLALMGTPFLAGFYSKDLILEATGASVLnLLGVVLSLVATMLTAVYSFRII 462
Cdd:PRK12662 381 VLLSLSLIGMPPTSGFVAKWYILDAFIKSNA-WIGLVVLLVGSGLSVIYVWKIV 433
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
166-464 |
1.72e-12 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 70.06 E-value: 1.72e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 166 SNSLFLIFLGWEGVGFLSFLLISWWTTRNdASSSALEAVIYNRIGDIGLIT---FMALSALSFnSWNLTEiLSSNNDLTP 242
Cdd:PRK12561 106 AQDLLLFFLMWELELVPVYLLISIWGGQK-RLYAATKFILYTALASIFILVaglALALSGDTF-TFDLAE-LGAKSYPLA 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 243 LLPFLLFGLVLAAAGKSAQFGLHPWLPAAM-EGPTPVSallhsstMVVAGVFI------LVRTSdlFSLSPHAQ----SL 311
Cdd:PRK12561 183 LELLLYAGFLIAFGVKLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLkmggyaLIRFN--VQMLPDAHvyfaPA 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 312 VLILGGTTALFAASTAIAQHDIKKIIAYSTTSQLGLM------VTAIGIGQpalAFFHICTHAFFKAMLFLCSGSV---I 382
Cdd:PRK12561 254 LAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVllgiaaFTDLGISG---AMLQMISHGLIAAALFFLTGVTyerT 330
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 383 HSLSdeqdLRKMGGLSKLLPVTSACLILGSLALMGTPFLAGFYSKDLILEATG-----ASVLNLLGVVLSLVATMLTAVY 457
Cdd:PRK12561 331 HTLS----IPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSELTVFLGITssdvySSTFRTITILLAAVGLILTPIY 406
|
330
....*....|
gi 1476010405 458 ---SFRIIFF 464
Cdd:PRK12561 407 llsMLRRVFY 416
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
100-150 |
2.44e-09 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 53.20 E-value: 2.44e-09
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 1476010405 100 WLSNTPLNISLNFIYDQYFLVFLSVALIVTWSIMEFSFYYMAEDPNSNAFF 150
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
262-464 |
3.33e-08 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 56.64 E-value: 3.33e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 262 FGLHPWLPAAM-EGPTPVSALLhSSTMVVAGVFILVRTSDLFSLSPHAQ--SLVLILGGTTALFAASTAIAQHDIKKIIA 338
Cdd:PRK02546 230 VPLHTWLPDAHgEATAPVHMLL-AGILLKMGGYALLRMNAGMLPDAHAQfaPLLIVLGVVNIIYAALTSFAQRNLKRKIA 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 339 YSTTSQLGLMVTAIG----IGQPAlAFFHICTHAFFKAMLFLCSGSV---IHSLSdeqdLRKMGGLSKLLPVTSACLILG 411
Cdd:PRK02546 309 YSSISHMGFVLIGIGsftdLGTSG-AMLQMISHGLIGASLFFLVGATydrTHTLM----LDEMGGVGQKMRKMFAMWTAC 383
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1476010405 412 SLALMGTPFLAGFYSKDLILEATGAS-----VLNLLGVVLSLVATMLTAVY---SFRIIFF 464
Cdd:PRK02546 384 SLASLALPGMSGFVAELMVFVGFATSdaytlPFRVVVVFLAAVGVILTPIYllsMLREIFF 444
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
265-513 |
3.51e-08 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 55.81 E-value: 3.51e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 265 HPWLPAAMEG-PTPVSALLhsSTMVVAGVFILvrtsdLFSLSPHAQSLvLILGGTTALFAASTAIAQHDIKKIIAYSTTS 343
Cdd:MTH00196 115 HMWAPDVYEGaPTKTTALL--AIVPKLGIFSI-----LVSIGLNVNIL-LIGGLFSLFVGAIGALNQTKIKRLLAYSGIG 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 344 QLGLMVTAIGIG-----QPALAFFhicthaFFKAMLFLCSGSVIHSLSDEQDLR-KMGGLSKLLPVTSACLILGSLALMG 417
Cdd:MTH00196 187 HMGFVLWGIEIGsfesiQASLVYL------FIYIIMSICVFSIILALNVYKNLIiEFSGLSRRLPILAITLALTFLSIAG 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 418 TPFLAGFYSKDLILeATGASVLNLLGVVLSLVATMLTAVYSFR---IIFFCFSLSPSIAPLSPIGEENSNLNSALLrlam 494
Cdd:MTH00196 261 IPPLVGFLGKWLIL-LSGVVYQYYLIFLLAVFCSVIAGVYYVRivkILFFQANSFLLISTKILKKENKINLRKALL---- 335
|
250
....*....|....*....
gi 1476010405 495 gtIASGWFFSNFVFAPPSF 513
Cdd:MTH00196 336 --IGFSLYLILFTILSPNF 352
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
254-430 |
4.25e-08 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 56.11 E-value: 4.25e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 254 AAAGKSAQFGLHPWLPaamegPTPVSAllHSST-MVVAGVFI------LVRTSdlFSLSPHAQSL----VLILGGTTALF 322
Cdd:CHL00011 220 AYAVKLPIIPLHTWLP-----DTHGEA--HYSTcMLLAGILLkmgaygLIRIN--MELLPHAHSIfspwLVIVGAIQIIY 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 323 AASTAIAQHDIKKIIAYSTTSQLGLMVTAIG-IGQPAL--AFFHICTHAFFKAMLFLCSGSV---IHSLSdeqdLRKMGG 396
Cdd:CHL00011 291 AASTSLGQRNLKKRIAYSSVSHMGFIIIGIGsITDTGLngAILQIISHGFIGAALFFLAGTSydrIRLVY----LDEMGG 366
|
170 180 190
....*....|....*....|....*....|....
gi 1476010405 397 LSKLLPVTSACLILGSLALMGTPFLAGFYSKDLI 430
Cdd:CHL00011 367 IAIPMPKIFTMFSSFSMASLALPGMSGFVAELIV 400
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
161-427 |
4.66e-08 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 55.78 E-value: 4.66e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 161 LILTCSNSLFLIFLGWEGVGFLSFLLiSWWTTRNDASSSAleAVIYNRIG----DIGLITFMALSALSFNSWNLTEI--- 233
Cdd:CHL00049 125 MFLCGANDLITIFVALECLSLCSYLL-SGYTKKDVRSNEA--TMKYLLMGgassSILVYGFSWLYGLSGGEIELQEIvng 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 234 -LSSNNDLTPLLPFLLFGLVLAAAGKSAQFGLHPWLPAAMEG-PTPVSALLhSSTMVVAGVFILVRTSDL--FSLSPHAQ 309
Cdd:CHL00049 202 lINTQMYNSPGISIALIFITVGIGFKLSLAPFHQWTPDVYEGsPTPVVAFL-SVTSKVAASALATRIFDIpfYFSSNEWH 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 310 SLVLILGGTTALFAASTAIAQHDIKKIIAYSTTSQLGLMVTAIGIGQPALAFFHICTHAFFKAMLFL--CSGSVIHSLSD 387
Cdd:CHL00049 281 LLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLFYIFMNLgtFACIVLFGLRT 360
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 1476010405 388 EQD-LRKMGGLSKLLPVTSACLILGSLALMGTPFLAGFYSK 427
Cdd:CHL00049 361 GTDnIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
310-441 |
1.27e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 54.74 E-value: 1.27e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 310 SLVLILGGTTALFAASTAIAQHDIKKIIAYSTTSQLGLMVTAIGIGQPA-----LAFFHICTHAFFKAMLFLCSGSVIHS 384
Cdd:PRK12664 202 EILLFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSgvaigILILQIVLSVVYQTLLFMVADSVINR 281
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 1476010405 385 lSDEQDLRKMGGLSKlLPVTSACLILGSLALMGTPFLAGFYSKDLILEATGASVLNL 441
Cdd:PRK12664 282 -TRKFNLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLTL 336
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
103-462 |
1.55e-07 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 54.29 E-value: 1.55e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 103 NTPLNISL--NFIYDQYFLVFLSVALIVTWSIMEFSFYYMAEDPNSNAFFR--LLTIFLLNMLiLTCSNSLFLIFLGWEG 178
Cdd:PRK02504 63 DNPNPISFlgSFNADNLSIAFRAIIALSTLVTLLMSWRYVEQSGTPLGEFAaiLLTATLGGMF-LSGATELVMIFISLET 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 179 VGFLSFLLiSWWTTRNDASSSAleAVIYNRIGDIGLITFM----ALSALSFNSWNLTEILSSNNDLTPLLPFLLFGLVLA 254
Cdd:PRK02504 142 LSIASYLL-TGYMKRDPRSNEA--ALKYLLIGAASSAIFLygssLLYGLSGGSTQLSAIALALITSPSLGLALALVFVIA 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 255 AAG-KSAQFGLHPWLPAAMEG-PTPVSALLhSSTMVVAGVFILVR--TSDLFSLSPHAQSLVLILGGTTALFAASTAIAQ 330
Cdd:PRK02504 219 GIAfKISAVPFHQWTPDVYEGsPTPVVAFL-SVGSKAAGFALAIRllVTAFPSFDEQWKLLFTALAILSMVLGNVVALAQ 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 331 HDIKKIIAYSTTSQLGLMVTAIGIGQP---ALAFFHICTHAFFKAMLFLCsgSVIHSLSDEQD-LRKMGGLSKLLPVTSA 406
Cdd:PRK02504 298 TSMKRMLAYSSIGQAGFVMIGLVAGTEagyASMVFYLLAYLFMNLGAFAC--VILFSLRTGTDqISDYAGLYQKDPLLTL 375
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 1476010405 407 CLILGSLALMGTPFLAGFYSKDLILEATGASVLNLLgVVLSLVATMLTAVYSFRII 462
Cdd:PRK02504 376 GLSLCLLSLGGIPPLAGFFGKIYLFWAGWQAGLYLL-VLVGLVTSVISIYYYIRVI 430
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
258-453 |
3.02e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 53.32 E-value: 3.02e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 258 KSAQFGLHPWLPAA-MEGPTPVSALLHSSTMVvaGVFILVRTSDLF------SLSPHAQSLVLILGGTTALFAASTAIAQ 330
Cdd:PRK12666 223 KAAMWPLNFWLPPAyAAASAPVAALFAIMTKV--GIYAILRLSTLLfgpeagASAGFGQDWLLPGGLATLAFGAIGVLAA 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 331 HDIKKIIAYSTTSQLGLMVTAIGIGQPAL---AFFHICTHAFFKAMLFLCSGSV----------------IHSLSDEQDL 391
Cdd:PRK12666 301 QRLRRLAAYLVLVSSGTLLAAIGLGNPAAtaaALYYLVHSTLAAAALFLLADLVerqrgaaadrlavtpeLYDLDEEEEE 380
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1476010405 392 RKMGGLSKLLPVTSACLILGSLALMGTPFLAGFYSKDLILEATGASvlNLLGVVLSLVATML 453
Cdd:PRK12666 381 EVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQALLNP--PGAGAAWWLWALVL 440
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
152-459 |
8.41e-07 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 51.85 E-value: 8.41e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 152 LLTIFLLNMLILT-------CSNSLFLIFLGWEGVGFLSFLLISWWTTRNDASSSALEAVIYNRIGD-IGLITFMALSAL 223
Cdd:MTH00226 129 LTKSFLICMLILEfllyavfSVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSvLMLLCLFSLYNI 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 224 SFNSWNLTEILSSNNDLTPLLPFLLFGLVLAAAGKSAQFGLHPWLPAA-MEGPTPVSALLhSSTMVVAGVFILVRTSDLF 302
Cdd:MTH00226 209 HGTTDYLTLASCSHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPKAhVEAPVAGSVLL-AGILLKLGGYGLVRLSWPI 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 303 sLSPHAQSL---VLILGGTTALFAASTAIAQHDIKKIIAYSTTSQLGL----MVTAIGIGQPAlAFFHICTHAFFKAMLF 375
Cdd:MTH00226 288 -LPLGAQNLapaVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLvsitLVTHDIIGLTG-SIFIMLAHGIVSSLLF 365
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 376 LCSgSVIHSLSDEQDLRKMGGLSKLLPVTSACLILGSLALMGTPFLAGFYSKdlILEATGASVLNLLGVVLSLVATMLTA 455
Cdd:MTH00226 366 ILV-TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGE--YLSILSSFNWNPIIGVFVCSGVILSA 442
|
....
gi 1476010405 456 VYSF 459
Cdd:MTH00226 443 VYSF 446
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
264-443 |
2.67e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 46.74 E-value: 2.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 264 LHPWLPAAMEGPTPVSALLHSSTMVVAGVFILVRTSDLFSlsphaQSLVLILGGTTALFAASTAIAQHDIKKIIAYSTTS 343
Cdd:MTH00112 111 FHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLN-----PTLLLTLAILSTLIGGWGGLNQTQLRKIMAFSSIA 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 344 QLGLMVTAIGIgQPALAFFHICTHAFFKAMLFLcsgsVIHSLSDEQdLRKMGGLSKLLPVTSACLILGSLALMGTPFLAG 423
Cdd:MTH00112 186 HLGWMIAIITY-SPKLTLLTFYIYILMTTPMFL----TLNTTSTKT-LKDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTG 259
|
170 180 190
....*....|....*....|....*....|
gi 1476010405 424 FYSKDLIL----------EATGASVLNLLG 443
Cdd:MTH00112 260 FMPKWLILqeltkqnmtpTATIMAMLSLLS 289
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
265-462 |
5.74e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 46.16 E-value: 5.74e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 265 HPWLPAAMEG-PTPVSALLhsSTMVVAGVFilvrtSDLFSLSPHAQsLVLILGGTTALFAASTAIAQHDIKKIIAYSTTS 343
Cdd:MTH00199 210 HMWAPDVYEGaPTITTALL--ATVPKIGVF-----SILVQIGPVTN-VVLICAVLSIIYGAIGALNQTKIKRLLAYSGIG 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 344 QLGLMVTAIGIG-----QPALAFFHIcthaffKAMLFLCSGSVIHSLSDEQDL-RKMGGLSKLLPVTSACLILGSLALMG 417
Cdd:MTH00199 282 HMGFILFGVAIGsfesiQASLIYMII------YVIMSICSFSIILSLKLTKGLiVEVSGLSRKNPVIALTLALTFLSIAG 355
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1476010405 418 TPFLAGFYSKDLILEA---TGASVLNLLGVVLSLVAtmltAVYSFRII 462
Cdd:MTH00199 356 IPPLAGFLSKWLILLSgvsSGYYLICIIAVLSSVIA----GVYYVRVV 399
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
95-352 |
3.33e-04 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 43.58 E-value: 3.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 95 ITLSLWLSNTPLNISLNFIYDQYFLVFLSVALIV--TW--SIMEFSFYYMAEDPNSNAFFRLLTIFLLNMLILTCS-NSL 169
Cdd:MTH00014 33 LSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITltLWitALMILASFKIFQNNKAPKTFMTNILILNLILLLTFSaSNL 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 170 FLIFLGWEGVGFLSFLLISWWTTRNDASSSALEAVIYNRIGDIGLITFMALSALSFNSWNLTeILSSNNDLTPLLPFLLF 249
Cdd:MTH00014 113 LMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSLSML-MSSMEPPSIYLMNLWWL 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 250 GLVLAAAGKSAQFGLHPWLPAA-MEGPTpvsallhSSTMVVAGVFI------LVRTSDLFSLSPHAQSLVLI-LGGTTAL 321
Cdd:MTH00014 192 ITILAFMVKMPLYTVHLWLPKAhVEAPV-------AGSMILAGILLklggygLLRMSSLFMHINKSLSAPFSsISLVGAV 264
|
250 260 270
....*....|....*....|....*....|.
gi 1476010405 322 FAASTAIAQHDIKKIIAYSTTSQLGLMVTAI 352
Cdd:MTH00014 265 ITSLICIRQPDLKSLIAYSSVGHMGLMTAGI 295
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
152-381 |
2.26e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 40.93 E-value: 2.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 152 LLTIFLLNMLILTCSNSLFLIFLGWEGVGFLSFLLISWWTTRNDAsssaleAVIYNRIGDIGLITFMALSALSFnswnlt 231
Cdd:PRK06459 77 LYILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKKNKRP------AFVFMAFGELSTVLILAGFAWAF------ 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 232 eilSSNNDLTPLLPFLLFGLVLAAAGKSAQFGLHP-----WLPAAM-EGPTPVSALLhSSTMVVAGVFILVRTSDLFSLS 305
Cdd:PRK06459 145 ---IISGTTNFSYLPSPVPLILASFGFIIKMGMMPflvseWLPIAHgNAPSNFSAIL-SATMTLMGVYGILKMTILTQTI 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 306 PHAQS--LVLILGGTTALFAASTAIAQHDIKKIIAYSTTSQLGLMVTAIG-----------IGQPALA--FFHICTHAFF 370
Cdd:PRK06459 221 PIGYFglTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGAILVALGlymvtkqlitsIEHFSLItvILYSFAHSVA 300
|
250
....*....|.
gi 1476010405 371 KAMLFLCSGSV 381
Cdd:PRK06459 301 KTGLFLSSGLQ 311
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
119-459 |
3.24e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 40.31 E-value: 3.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 119 LVFLSVALIVTwSIMEFSFYYMAEDPNSNAFFRLLTIFLLNMLILT-CSNSLFLIFLGWEGVGFLSFLLISWWTTRNDAS 197
Cdd:MTH00206 64 LVILSCWLLPL-MFLASQNHMKNEPINRQRIYITLLIVLQLFLILFfSSSNLLLFYILFEASLIPTLLLITRWGNQKERL 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 198 SSALEAVIYNRIGDIGLITFMALSALSFNSWNLTeILSSNNDLTPLLPFLLFGLVLAAAGKSAQFGLHPWLPAA-MEGPT 276
Cdd:MTH00206 143 NAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSLY-ILYFSKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAhVEAPV 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 277 pvsallhSSTMVVAGV------FILVRTSDLFSLSPHAQS-LVLILGGTTALFAASTAIAQHDIKKIIAYSTTSQLGLMV 349
Cdd:MTH00206 222 -------AGSMVLAGVllklggYGMMRIILILGPSTKLSSyFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVT 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 350 TAIGIGQP---ALAFFHICTHAFFKAMLFlCSGSVIHSLSDEQDLRKMGGLSKLLPVTSACLILGSLALMGTPFLAGFYS 426
Cdd:MTH00206 295 AGILSGSPwgfKGALLLMIAHGLVSSALF-CLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFG 373
|
330 340 350
....*....|....*....|....*....|...
gi 1476010405 427 KDLILeaTGASVLNLLGVVLSLVATMLTAVYSF 459
Cdd:MTH00206 374 ELLII--TSLFSWSNFTLPLLGLGFLFTAIYSL 404
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
262-469 |
5.90e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 39.27 E-value: 5.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 262 FGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFILVRTSDLFSLsphaqslVLILGGTTALFAASTAIAQHDIKKIIAYST 341
Cdd:MTH00197 96 FPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSFMG-------LLICSVLSSLIGGIGGMNQSNIRQLLAYSS 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 342 TSQLGLMVTAIGIGQPALAFFHICTHAFFKAMLFLCSGSVIHSLSDEQDLRKMGGLSKLLpvtsacLILGSLALMGTPFL 421
Cdd:MTH00197 169 IGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVF------LGLSFLSLGGLPPL 242
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1476010405 422 AGFYSKDLILEATGASVLNLLGVVLsLVATMLTAVYSFRIIFFCFSLS 469
Cdd:MTH00197 243 SGFFLKWLILTSLLSSNISLITFML-ILSTCFSLYYYLSLAYKSLILS 289
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
262-458 |
7.88e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 39.17 E-value: 7.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 262 FGLHPWLPAA-MEGPTPVSALLHSSTMVVAGVFILVRTSDLFSLSPHAQSLVLILGGTTALFAASTAIAQHDIKKIIAYS 340
Cdd:MTH00127 211 YGVHLWLPKAhVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYS 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1476010405 341 TTSQLGLMVTAIGIGQP---ALAFFHICTHAFFKAMLFlCSGSVIHSLSDEQDLRKMGGLSKLLPVTSACLILGSLALMG 417
Cdd:MTH00127 291 SVSHMGLVAGGILIQTPwgfTGALILMIAHGLTSSALF-CLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLA 369
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 1476010405 418 TPFLAGFYSKDLILeaTGASVLNLLGVVLSLVATMLTAVYS 458
Cdd:MTH00127 370 LPPLPNLMGELMII--TSLFNWSPWTLALTGLGTLITAGYS 408
|
|
| |
