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Conserved domains on  [gi|444525957|gb|ELV14234|]
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Defensin-7 [Tupaia chinensis]

Protein Classification

Defensin_propep and Defensin_1 domain-containing protein (domain architecture ID 10467842)

Defensin_propep and Defensin_1 domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Defensin_propep pfam00879
Defensin propeptide;
1-51 6.25e-26

Defensin propeptide;


:

Pssm-ID: 395707  Cd Length: 51  Bit Score: 90.36  E-value: 6.25e-26
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 444525957   1 MRTLTLISAILLVTLQAQADPLPDTSDEVQVQEQAAAENPDVAISFAGDEN 51
Cdd:pfam00879  1 MRTLALLAAILLVALQAQAEPLQARADEAPDQEQPGAEDQDVSISFAGDES 51
Defensin_1 pfam00323
Mammalian defensin;
65-93 1.79e-10

Mammalian defensin;


:

Pssm-ID: 395255  Cd Length: 29  Bit Score: 50.69  E-value: 1.79e-10
                         10        20
                 ....*....|....*....|....*....
gi 444525957  65 CRCTRGFCLFPERNSGFCLLRGIRYSFCC 93
Cdd:pfam00323  1 CYCRRGGCRFPERRSGTCRISGRRYRLCC 29
 
Name Accession Description Interval E-value
Defensin_propep pfam00879
Defensin propeptide;
1-51 6.25e-26

Defensin propeptide;


Pssm-ID: 395707  Cd Length: 51  Bit Score: 90.36  E-value: 6.25e-26
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 444525957   1 MRTLTLISAILLVTLQAQADPLPDTSDEVQVQEQAAAENPDVAISFAGDEN 51
Cdd:pfam00879  1 MRTLALLAAILLVALQAQAEPLQARADEAPDQEQPGAEDQDVSISFAGDES 51
Defensin_1 pfam00323
Mammalian defensin;
65-93 1.79e-10

Mammalian defensin;


Pssm-ID: 395255  Cd Length: 29  Bit Score: 50.69  E-value: 1.79e-10
                         10        20
                 ....*....|....*....|....*....
gi 444525957  65 CRCTRGFCLFPERNSGFCLLRGIRYSFCC 93
Cdd:pfam00323  1 CYCRRGGCRFPERRSGTCRISGRRYRLCC 29
DEFSN smart00048
Defensin/corticostatin family; Cysteine-rich domains that lyse bacteria, fungi and enveloped ...
65-93 8.98e-06

Defensin/corticostatin family; Cysteine-rich domains that lyse bacteria, fungi and enveloped viruses by forming multimeric membrane-spanning channels.


Pssm-ID: 128363  Cd Length: 29  Bit Score: 38.85  E-value: 8.98e-06
                          10        20
                  ....*....|....*....|....*....
gi 444525957   65 CRCTRGFCLFPERNSGFCLLRGIRYSFCC 93
Cdd:smart00048  1 CYCRRRRCPRRERRIGTCRIRGRRYTFCC 29
 
Name Accession Description Interval E-value
Defensin_propep pfam00879
Defensin propeptide;
1-51 6.25e-26

Defensin propeptide;


Pssm-ID: 395707  Cd Length: 51  Bit Score: 90.36  E-value: 6.25e-26
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 444525957   1 MRTLTLISAILLVTLQAQADPLPDTSDEVQVQEQAAAENPDVAISFAGDEN 51
Cdd:pfam00879  1 MRTLALLAAILLVALQAQAEPLQARADEAPDQEQPGAEDQDVSISFAGDES 51
Defensin_1 pfam00323
Mammalian defensin;
65-93 1.79e-10

Mammalian defensin;


Pssm-ID: 395255  Cd Length: 29  Bit Score: 50.69  E-value: 1.79e-10
                         10        20
                 ....*....|....*....|....*....
gi 444525957  65 CRCTRGFCLFPERNSGFCLLRGIRYSFCC 93
Cdd:pfam00323  1 CYCRRGGCRFPERRSGTCRISGRRYRLCC 29
DEFSN smart00048
Defensin/corticostatin family; Cysteine-rich domains that lyse bacteria, fungi and enveloped ...
65-93 8.98e-06

Defensin/corticostatin family; Cysteine-rich domains that lyse bacteria, fungi and enveloped viruses by forming multimeric membrane-spanning channels.


Pssm-ID: 128363  Cd Length: 29  Bit Score: 38.85  E-value: 8.98e-06
                          10        20
                  ....*....|....*....|....*....
gi 444525957   65 CRCTRGFCLFPERNSGFCLLRGIRYSFCC 93
Cdd:smart00048  1 CYCRRRRCPRRERRIGTCRIRGRRYTFCC 29
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.19
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
  • Marchler-Bauer A et al. (2015), "CDD: NCBI's conserved domain database.", Nucleic Acids Res.43(D)222-6.
  • Marchler-Bauer A et al. (2011), "CDD: a Conserved Domain Database for the functional annotation of proteins.", Nucleic Acids Res.39(D)225-9.
  • Marchler-Bauer A, Bryant SH (2004), "CD-Search: protein domain annotations on the fly.", Nucleic Acids Res.32(W)327-331.
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