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Conserved domains on  [gi|213385295|ref|NP_001132964|]
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serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta [Rattus norvegicus]

Protein Classification

PPP2R3 domain-containing protein( domain architecture ID 1750224)

PPP2R3 domain-containing protein similar to Mus musculus serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit delta that might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PPP2R3 super family cl41751
serine/threonine protein phosphatase 2A regulatory subunit B"; Heterotrimeric serine/threonine ...
132-488 7.29e-162

serine/threonine protein phosphatase 2A regulatory subunit B"; Heterotrimeric serine/threonine protein phosphatase 2A (PP2A) consists of scaffolding (A), catalytic (C), and variable (B, B', and B") subunits. The variable subunits dictate subcellular localization and substrate specificity of the PP2A holoenzyme. This family includes PP2A regulatory B'' subunits alpha, beta and gamma, encoded by PPP2R3A, PPP2R3B and PPP2R3C, respectively. It also includes subunit delta encoded by PPP2R3D in mouse. These B-family regulatory subunits play various roles including regulation of cytoskeletal assembly, neuronal differentiation, mitogen-activated protein kinase signaling, and apoptosis. Subunits alpha and beta contain two-domain elongated structure with two calcium EF-hands which mediate Ca2+-dependent changes in phosphatase activity.


The actual alignment was detected with superfamily member cd21507:

Pssm-ID: 425382  Cd Length: 355  Bit Score: 464.82  E-value: 7.29e-162
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213385295 132 YFPRGRPGQGPDVDDVIADVERAFARLPSGRAGLQDMGVVAKACCCPLYWKAPLFLAAGGGAQGgFVSARDIIGLWKPIL 211
Cdd:cd21507    1 YFPRGCPKDSVNVDAVIAKIENTFSQFPNERATLDDMGKVAKACDCPLYWKGPLFYAAGGERTG-SVSVHKFVAMWRKIL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213385295 212 LTCHDEAARFERLLGGPGDGGLSPEDLAPLVQDVADSHPGLSFLREAEPLRRDYVTTVTQRVFYAVNRSWSGRISCQEIR 291
Cdd:cd21507   80 QNCHDDAAKFVHLLMKPGCNYLVQEDFIPFLQDVVNTHPGLSFLKEASEFHSRYITTVIQRIFYTVNRSWSGRITCTELR 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213385295 292 RSCFLQAVSQLEAEPNPGRATpSFFSYPHFCVIVSKFQALDADGDGLIDRHDLRRHADGAISSRMIDRIFSGAVTRARPS 371
Cdd:cd21507  160 RSSFLQNVALLEEEADINQLT-EFFSYEHFYVIYCKFWELDTDHDLYIDQKDLARHNDHAISNRMIERIFSGAVTRGRKA 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213385295 372 PEGGKMGLADFVWFLLSEEDKTTPTSTEYWFRCMDLDGDGVLSAPELSFFYEEQAQNLAARGAEPPPFADLTRQALDLVQ 451
Cdd:cd21507  239 QKEGKISYADFVWFLISEEDKKTPTSIEYWFRCMDLDGDGALSMYELEYFYEEQCQKLDNMAIEPLPFEDCLCQMLDLVK 318
                        330       340       350
                 ....*....|....*....|....*....|....*..
gi 213385295 452 PRCPGQITLGDLKRCGLAGEFFDAFFNADKFLEHERR 488
Cdd:cd21507  319 PRTEGKITLHDLKRCKLANVFFDTFFNIEKYLDHEQK 355
 
Name Accession Description Interval E-value
PPP2R3B cd21507
serine/threonine protein phosphatase 2A regulatory subunit B" subunit beta; Heterotrimeric ...
132-488 7.29e-162

serine/threonine protein phosphatase 2A regulatory subunit B" subunit beta; Heterotrimeric serine/threonine protein phosphatase 2A (PP2A) consists of scaffolding (A), catalytic (C), and variable (B, B', and B") subunits. The variable subunits dictate subcellular localization and substrate specificity of the PP2A holoenzyme. This group contains protein phosphatase subunit PR70 (also known as protein phosphatase 2 regulatory subunit B'' subunit beta, PR48, NYREN8, PPP2R3L, or PPP2R3LY) that is encoded by the PPP2R3B gene. This substrate-recognizing subunit of PP2A has a two-domain elongated structure with two calcium EF-hands, each displaying different affinities to Ca2+. PPP2R3B/PR70 is a gonosomal melanoma tumor suppressor gene; PR70 decreased melanoma growth by negatively interfering with DNA replication and cell cycle progression through its role in stabilizing the cell division cycle 6 (CDC6)-chromatin licensing and DNA replication factor 1 (CDT1) interaction, which delays the firing of origins of DNA replication.


Pssm-ID: 410340  Cd Length: 355  Bit Score: 464.82  E-value: 7.29e-162
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213385295 132 YFPRGRPGQGPDVDDVIADVERAFARLPSGRAGLQDMGVVAKACCCPLYWKAPLFLAAGGGAQGgFVSARDIIGLWKPIL 211
Cdd:cd21507    1 YFPRGCPKDSVNVDAVIAKIENTFSQFPNERATLDDMGKVAKACDCPLYWKGPLFYAAGGERTG-SVSVHKFVAMWRKIL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213385295 212 LTCHDEAARFERLLGGPGDGGLSPEDLAPLVQDVADSHPGLSFLREAEPLRRDYVTTVTQRVFYAVNRSWSGRISCQEIR 291
Cdd:cd21507   80 QNCHDDAAKFVHLLMKPGCNYLVQEDFIPFLQDVVNTHPGLSFLKEASEFHSRYITTVIQRIFYTVNRSWSGRITCTELR 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213385295 292 RSCFLQAVSQLEAEPNPGRATpSFFSYPHFCVIVSKFQALDADGDGLIDRHDLRRHADGAISSRMIDRIFSGAVTRARPS 371
Cdd:cd21507  160 RSSFLQNVALLEEEADINQLT-EFFSYEHFYVIYCKFWELDTDHDLYIDQKDLARHNDHAISNRMIERIFSGAVTRGRKA 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213385295 372 PEGGKMGLADFVWFLLSEEDKTTPTSTEYWFRCMDLDGDGVLSAPELSFFYEEQAQNLAARGAEPPPFADLTRQALDLVQ 451
Cdd:cd21507  239 QKEGKISYADFVWFLISEEDKKTPTSIEYWFRCMDLDGDGALSMYELEYFYEEQCQKLDNMAIEPLPFEDCLCQMLDLVK 318
                        330       340       350
                 ....*....|....*....|....*....|....*..
gi 213385295 452 PRCPGQITLGDLKRCGLAGEFFDAFFNADKFLEHERR 488
Cdd:cd21507  319 PRTEGKITLHDLKRCKLANVFFDTFFNIEKYLDHEQK 355
EF-hand_13 pfam17958
EF-hand domain; This entry represents an EF-hand domain found in one of the regulatory B ...
216-305 4.13e-37

EF-hand domain; This entry represents an EF-hand domain found in one of the regulatory B subunits of PP2A.


Pssm-ID: 465586 [Multi-domain]  Cd Length: 90  Bit Score: 132.49  E-value: 4.13e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213385295  216 DEAARFERLLGGPGDGGLSPEDLAPLVQDVADSHPGLSFLREAEPLRRDYVTTVTQRVFYAVNRSWSGRISCQEIRRSCF 295
Cdd:pfam17958   1 DEAARFFRLLKGPGKNYLSREDFYPFVQDVVDTHPGLEFLREAEEFQDKYIQTVIARIFYVVNRSWSGKITLLELRKSDL 80
                          90
                  ....*....|
gi 213385295  296 LQAVSQLEAE 305
Cdd:pfam17958  81 LKAVRQLDEE 90
FRQ1 COG5126
Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms];
328-424 6.34e-08

Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms];


Pssm-ID: 444056 [Multi-domain]  Cd Length: 137  Bit Score: 51.72  E-value: 6.34e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213385295 328 FQALDADGDGLIDRHDLRrhadgAISSRMIDRIFSGAVTRArpspeGGKMGLADFVWFLLSEEDKTTPTSTEYWFRCMDL 407
Cdd:COG5126   11 FDLLDADGDGVLERDDFE-----ALFRRLWATLFSEADTDG-----DGRISREEFVAGMESLFEATVEPFARAAFDLLDT 80
                         90
                 ....*....|....*..
gi 213385295 408 DGDGVLSAPELSFFYEE 424
Cdd:COG5126   81 DGDGKISADEFRRLLTA 97
 
Name Accession Description Interval E-value
PPP2R3B cd21507
serine/threonine protein phosphatase 2A regulatory subunit B" subunit beta; Heterotrimeric ...
132-488 7.29e-162

serine/threonine protein phosphatase 2A regulatory subunit B" subunit beta; Heterotrimeric serine/threonine protein phosphatase 2A (PP2A) consists of scaffolding (A), catalytic (C), and variable (B, B', and B") subunits. The variable subunits dictate subcellular localization and substrate specificity of the PP2A holoenzyme. This group contains protein phosphatase subunit PR70 (also known as protein phosphatase 2 regulatory subunit B'' subunit beta, PR48, NYREN8, PPP2R3L, or PPP2R3LY) that is encoded by the PPP2R3B gene. This substrate-recognizing subunit of PP2A has a two-domain elongated structure with two calcium EF-hands, each displaying different affinities to Ca2+. PPP2R3B/PR70 is a gonosomal melanoma tumor suppressor gene; PR70 decreased melanoma growth by negatively interfering with DNA replication and cell cycle progression through its role in stabilizing the cell division cycle 6 (CDC6)-chromatin licensing and DNA replication factor 1 (CDT1) interaction, which delays the firing of origins of DNA replication.


Pssm-ID: 410340  Cd Length: 355  Bit Score: 464.82  E-value: 7.29e-162
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213385295 132 YFPRGRPGQGPDVDDVIADVERAFARLPSGRAGLQDMGVVAKACCCPLYWKAPLFLAAGGGAQGgFVSARDIIGLWKPIL 211
Cdd:cd21507    1 YFPRGCPKDSVNVDAVIAKIENTFSQFPNERATLDDMGKVAKACDCPLYWKGPLFYAAGGERTG-SVSVHKFVAMWRKIL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213385295 212 LTCHDEAARFERLLGGPGDGGLSPEDLAPLVQDVADSHPGLSFLREAEPLRRDYVTTVTQRVFYAVNRSWSGRISCQEIR 291
Cdd:cd21507   80 QNCHDDAAKFVHLLMKPGCNYLVQEDFIPFLQDVVNTHPGLSFLKEASEFHSRYITTVIQRIFYTVNRSWSGRITCTELR 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213385295 292 RSCFLQAVSQLEAEPNPGRATpSFFSYPHFCVIVSKFQALDADGDGLIDRHDLRRHADGAISSRMIDRIFSGAVTRARPS 371
Cdd:cd21507  160 RSSFLQNVALLEEEADINQLT-EFFSYEHFYVIYCKFWELDTDHDLYIDQKDLARHNDHAISNRMIERIFSGAVTRGRKA 238
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213385295 372 PEGGKMGLADFVWFLLSEEDKTTPTSTEYWFRCMDLDGDGVLSAPELSFFYEEQAQNLAARGAEPPPFADLTRQALDLVQ 451
Cdd:cd21507  239 QKEGKISYADFVWFLISEEDKKTPTSIEYWFRCMDLDGDGALSMYELEYFYEEQCQKLDNMAIEPLPFEDCLCQMLDLVK 318
                        330       340       350
                 ....*....|....*....|....*....|....*..
gi 213385295 452 PRCPGQITLGDLKRCGLAGEFFDAFFNADKFLEHERR 488
Cdd:cd21507  319 PRTEGKITLHDLKRCKLANVFFDTFFNIEKYLDHEQK 355
PPP2R3A_B-like cd21504
serine/threonine protein phosphatase 2A regulatory subunit B" alpha and beta subunits, and ...
207-482 1.07e-131

serine/threonine protein phosphatase 2A regulatory subunit B" alpha and beta subunits, and similar proteins; Heterotrimeric serine/threonine protein phosphatase 2A (PP2A) consists of scaffolding (A), catalytic (C), and variable (B, B', and B") subunits. The variable subunits dictate subcellular localization and substrate specificity of the PP2A holoenzyme. These B-family regulatory subunits play various roles including regulation of cytoskeletal assembly, neuronal differentiation, mitogen-activated protein kinase signaling, and apoptosis. This subfamily includes protein phosphatase 2A regulatory subunit B'' subunits alpha and beta, encoded by PPP2R3A and PPP2R3B. It also includes subunit delta encoded by PPP2R3D in mouse. They contain two-domain elongated structures with two calcium EF-hands which mediate Ca2+-dependent changes in phosphatase activity.


Pssm-ID: 410337  Cd Length: 274  Bit Score: 384.59  E-value: 1.07e-131
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213385295 207 WKPILLTCHDEAARFERLLGGPGDGGLSPEDLAPLVQDVADSHPGLSFLREAEPLRRDYVTTVTQRVFYAVNRSWSGRIS 286
Cdd:cd21504    1 WKKILAGCHDDASRFFRILKKPDRNYLVPEDFKPFLQDLLDTHPGLEFLQDTPEFQERYAETVIYRIFYSVNRSWSGRIT 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213385295 287 CQEIRRSCFLQAVSQLEAEPNPGRATpSFFSYPHFCVIVSKFQALDADGDGLIDRHDLRRHADGAISSRMIDRIFSGAVT 366
Cdd:cd21504   81 LRELRRSNLLQALLLLDEEEDINKVL-RYFSYEHFYVIYCKFWELDTDHDLLIDKDDLLRYGDHALSPRIVDRIFSGAVR 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213385295 367 RARPSPEGgKMGLADFVWFLLSEEDKTTPTSTEYWFRCMDLDGDGVLSAPELSFFYEEQAQNLAARGAEPPPFADLTRQA 446
Cdd:cd21504  160 RFKSGKEG-KMSYEDFVWFILSEEDKTSPTSIEYWFRCMDLDGDGVLSMYEMEYFYEEQLQRMECLGIEPVPFEDILCQM 238
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 213385295 447 LDLVQPRCPGQITLGDLKRCGLAGEFFDAFFNADKF 482
Cdd:cd21504  239 LDMIKPENEGKITLRDLKRCKLAGNFFNTLFNLNKF 274
PPP2R3A cd21506
serine/threonine protein phosphatase 2A regulatory subunit B" subunit alpha; Heterotrimeric ...
207-490 2.86e-123

serine/threonine protein phosphatase 2A regulatory subunit B" subunit alpha; Heterotrimeric serine/threonine protein phosphatase 2A (PP2A) consists of scaffolding (A), catalytic (C), and variable (B, B', and B") subunits. The variable subunits dictate subcellular localization and substrate specificity of the PP2A holoenzyme. This group contains protein phosphatase subunit PR130 (also known as protein phosphatase 2A regulatory subunit B'' subunit alpha, PR72, or PPP2R3) that is encoded by the PPP2R3A gene. PR130 and PR72 subunits are derived from the same gene through differential splicing; they harbor specific N-terminal domains of different lengths that are encoded by alternatively spliced exons and have identical C-termini. The common C-terminus contains a two-domain elongated structure with two calcium EF-hands which mediate Ca2+-dependent changes in phosphatase activity. The PR130 subunit has been shown to interact with the LIM domain of lipoma-preferred partner (LPP) through a conserved Zn2+-finger-like motif in the N-terminus of PR130.


Pssm-ID: 410339  Cd Length: 284  Bit Score: 363.49  E-value: 2.86e-123
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213385295 207 WKPILLTCHDEAARFERLLGGPGDGGLSPEDLAPLVQDVADSHPGLSFLREAEPLRRDYVTTVTQRVFYAVNRSWSGRIS 286
Cdd:cd21506    1 WRKLLNNCHDDASKFVYLLAKPNCSYLEQEDFIPLLQDIVDTHPGLTFLKDAPEFHSRYITTVIQRIFYTVNRSWSGKIT 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213385295 287 CQEIRRSCFLQAVSQLEAEPNPGRATpSFFSYPHFCVIVSKFQALDADGDGLIDRHDLRRHADGAISSRMIDRIFSGAVT 366
Cdd:cd21506   81 LTELRKSNFLQTLALLEEEDDINQIT-DYFSYEHFYVIYCKFWELDTDHDLYIDQKDLARYNDQASSSRIIERIFSGAVT 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213385295 367 RARPSPEGGKMGLADFVWFLLSEEDKTTPTSTEYWFRCMDLDGDGVLSAPELSFFYEEQAQNLAARGAEPPPFADLTRQA 446
Cdd:cd21506  160 RGNSVQKEGRMSYADFVWFLISEEDKRNPTSIEYWFRCMDLDGDGVLSMYELEYFYEEQCERMEAMGIEPLPFHDLLCQM 239
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 213385295 447 LDLVQPRCPGQITLGDLKRCGLAGEFFDAFFNADKFLEHERREP 490
Cdd:cd21506  240 LDLVKPEVDGKITLRDLKRCRMAHIFYDTFFNLEKYLDHEQRDP 283
PPP2R3 cd21339
serine/threonine protein phosphatase 2A regulatory subunit B"; Heterotrimeric serine/threonine ...
236-476 5.65e-99

serine/threonine protein phosphatase 2A regulatory subunit B"; Heterotrimeric serine/threonine protein phosphatase 2A (PP2A) consists of scaffolding (A), catalytic (C), and variable (B, B', and B") subunits. The variable subunits dictate subcellular localization and substrate specificity of the PP2A holoenzyme. This family includes PP2A regulatory B'' subunits alpha, beta and gamma, encoded by PPP2R3A, PPP2R3B and PPP2R3C, respectively. It also includes subunit delta encoded by PPP2R3D in mouse. These B-family regulatory subunits play various roles including regulation of cytoskeletal assembly, neuronal differentiation, mitogen-activated protein kinase signaling, and apoptosis. Subunits alpha and beta contain two-domain elongated structure with two calcium EF-hands which mediate Ca2+-dependent changes in phosphatase activity.


Pssm-ID: 410336  Cd Length: 259  Bit Score: 300.27  E-value: 5.65e-99
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213385295 236 EDLAPLVQDVADSHPGLSFLREAEPLRRDYVTTVTQRVFYAVNRSWSGRISCQEIRRSCFLQAVSQLEAEPNPGRATpSF 315
Cdd:cd21339   20 EDFEPYLQDVVPTHPGLDFLKKAPEFHSRYITTVIQRIFYFVNRSWSGKITIQEIRASSFLQDLALLEEEEDINQET-NW 98
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213385295 316 FSYPHFCVIVSKFQALDADGDGLIDRHDLRRHADGAISSRMIDRIFSGAVTRARPSPEGGKMGLADFVWFLLSEEDKTTP 395
Cdd:cd21339   99 FSYEHFYVIYCKFWELDTDHDLMISKEDLSRYNDAAMSNVFIDRIFSGAVTRGKTIQKEGEMSYADFVWFLISEEDKKEP 178
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213385295 396 TSTEYWFRCMDLDGDGVLSAPELSFFYEEQAQNLAARGAEPPPFADLTRQALDLVQPRCPGQITLGDLKRCGLAGEFFDA 475
Cdd:cd21339  179 TSIEYWFRCLDIDGDGYLSVFELEYFYEEQCERMKIHGIEPLPFQDVLCQILDLVKPKDPGKITLQDLKRCNIALNFFDT 258

                 .
gi 213385295 476 F 476
Cdd:cd21339  259 F 259
EF-hand_13 pfam17958
EF-hand domain; This entry represents an EF-hand domain found in one of the regulatory B ...
216-305 4.13e-37

EF-hand domain; This entry represents an EF-hand domain found in one of the regulatory B subunits of PP2A.


Pssm-ID: 465586 [Multi-domain]  Cd Length: 90  Bit Score: 132.49  E-value: 4.13e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213385295  216 DEAARFERLLGGPGDGGLSPEDLAPLVQDVADSHPGLSFLREAEPLRRDYVTTVTQRVFYAVNRSWSGRISCQEIRRSCF 295
Cdd:pfam17958   1 DEAARFFRLLKGPGKNYLSREDFYPFVQDVVDTHPGLEFLREAEEFQDKYIQTVIARIFYVVNRSWSGKITLLELRKSDL 80
                          90
                  ....*....|
gi 213385295  296 LQAVSQLEAE 305
Cdd:pfam17958  81 LKAVRQLDEE 90
PPP2R3C cd21505
serine/threonine protein phosphatase 2A regulatory subunit B" subunit gamma; Heterotrimeric ...
234-489 1.10e-32

serine/threonine protein phosphatase 2A regulatory subunit B" subunit gamma; Heterotrimeric serine/threonine protein phosphatase 2A (PP2A) consists of scaffolding (A), catalytic (C), and variable (B, B', and B") subunits. The variable subunits dictate subcellular localization and substrate specificity of the PP2A holoenzyme. This subfamily includes protein phosphatase subunit G5PR (also known as serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma, G4-1, G5pr, GDRM, SPGF36, or C14orf10) that is encoded by the PPP2R3C gene. It is involved in the control of the dynamic organization of the cortical cytoskeleton and plays an important role in the organization of interphase microtubule arrays in part through the regulation of nucleation geometry. G5PR is involved in the ontogeny of multiple organs, especially critical for testis development and spermatogenesis. PPP2R3C gene variants cause syndromic 46,XY gonadal dysgenesis and impaired spermatogenesis in humans, and thus is emerging as a potential therapeutic target for male infertility.


Pssm-ID: 410338 [Multi-domain]  Cd Length: 382  Bit Score: 128.84  E-value: 1.10e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213385295 234 SPEDLAPLVQDVADSHPGLSFLreAEPLRRDYVTTVTQRVFYAVNRSWSGRISCQEIRRSCFLQAVSQL-EAEPNPGRAT 312
Cdd:cd21505  134 TESDLENYILELIPTLPQLSGL--EESFYSFYVCTAVRKFFFFLDPLRRGKIRIKDILASPFLDELLELrDEELSEELQE 211
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213385295 313 PSFFSYPHFCVIVSKFQALDADGDGLIDRHDLRRHADGAISSRMIDRIFSGAVTRarpspeGGKMGLADFVWFLLSEEDK 392
Cdd:cd21505  212 SNWFSAPSALRVYGQYLNLDKDHNGMLSKQELSRYGKGTLTSVFIDRVFQECLTY------NGEMDYKTFLDFVLAMENR 285
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213385295 393 TTPTSTEYWFRCMDLDGDGVLSAPELSFFYEEQAQNLAARGAEPPPFADLTRQALDLVQPRCPGQITLGDLKRCGLAGEF 472
Cdd:cd21505  286 KEPQALQYFFRILDLKGQGYLTPFTLNYFFRAIQEKMKEHGQEPVSFEDVKDEIFDMVKPKDPLKITLQDLINSGQGDTV 365
                        250
                 ....*....|....*..
gi 213385295 473 FDAFFNADKFLEHERRE 489
Cdd:cd21505  366 VSILIDLNGFWAYENRE 382
FRQ1 COG5126
Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms];
328-424 6.34e-08

Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms];


Pssm-ID: 444056 [Multi-domain]  Cd Length: 137  Bit Score: 51.72  E-value: 6.34e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213385295 328 FQALDADGDGLIDRHDLRrhadgAISSRMIDRIFSGAVTRArpspeGGKMGLADFVWFLLSEEDKTTPTSTEYWFRCMDL 407
Cdd:COG5126   11 FDLLDADGDGVLERDDFE-----ALFRRLWATLFSEADTDG-----DGRISREEFVAGMESLFEATVEPFARAAFDLLDT 80
                         90
                 ....*....|....*..
gi 213385295 408 DGDGVLSAPELSFFYEE 424
Cdd:COG5126   81 DGDGKISADEFRRLLTA 97
EF-hand_7 pfam13499
EF-hand domain pair;
321-422 1.24e-05

EF-hand domain pair;


Pssm-ID: 463900 [Multi-domain]  Cd Length: 67  Bit Score: 43.01  E-value: 1.24e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 213385295  321 FCVIVSKFQALDADGDGLIDRHDLRRhadgaissrmidrifsgAVTRarpspeggkmgladfvwflLSEEDKTTPTSTEY 400
Cdd:pfam13499   1 EEKLKEAFKLLDSDGDGYLDVEELKK-----------------LLRK-------------------LEEGEPLSDEEVEE 44
                          90       100
                  ....*....|....*....|..
gi 213385295  401 WFRCMDLDGDGVLSAPELSFFY 422
Cdd:pfam13499  45 LFKEFDLDKDGRISFEEFLELY 66
EF-hand_5 pfam13202
EF hand;
324-346 9.97e-03

EF hand;


Pssm-ID: 433035 [Multi-domain]  Cd Length: 25  Bit Score: 33.83  E-value: 9.97e-03
                          10        20
                  ....*....|....*....|...
gi 213385295  324 IVSKFQALDADGDGLIDRHDLRR 346
Cdd:pfam13202   1 LKDTFRQIDLNGDGKISKEELRR 23
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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