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Conserved domains on  [gi|2164644489|ref|NP_001257541|]
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zinc finger protein 512B isoform 3 [Gallus gallus]

Protein Classification

C2H2-type zinc finger family protein( domain architecture ID 705934)

Cys2His2 (C2H2)-type zinc finger family protein may be involved in transcriptional regulation

Gene Ontology:  GO:0046872

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SFP1 super family cl25788
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 371-446 3.21e-04

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


The actual alignment was detected with superfamily member COG5189:

Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 43.94  E-value: 3.21e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2164644489 371 CKKQFKSKAGLNYHTMAEHVSKGCAANFSSLMGYQYHQKrcgkqlaeaDKPvFSCPHCGKKYKSKAGHDYHVRSEH 446
Cdd:COG5189   357 CNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAK---------DKP-YRCEVCDKRYKNLNGLKYHRKHSH 422
SFP1 super family cl25788
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 526-638 2.78e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


The actual alignment was detected with superfamily member COG5189:

Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 40.86  E-value: 2.78e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164644489 526 QEIAEDELARDW-----TKRRMKDDLVPETKrlNYTRPGLPKLNPRLLESWKNEVKEKGH--INCPNNCCEAIYSSVSGL 598
Cdd:COG5189   290 EFIHKSVGNKEIrggisTGEMIDVRKLPCTN--SSSNGKLAHGGERNIDTPSRMLKVKDGkpYKCPVEGCNKKYKNQNGL 367

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2164644489 599 KAHL--ANCNKGEHSVGK-------------YRCLLCQKEFSSESGVKYHIIKAH 638
Cdd:COG5189   368 KYHMlhGHQNQKLHENPSpekmnifsakdkpYRCEVCDKRYKNLNGLKYHRKHSH 422
 
Name Accession Description Interval E-value
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 371-446 3.21e-04

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 43.94  E-value: 3.21e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2164644489 371 CKKQFKSKAGLNYHTMAEHVSKGCAANFSSLMGYQYHQKrcgkqlaeaDKPvFSCPHCGKKYKSKAGHDYHVRSEH 446
Cdd:COG5189   357 CNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAK---------DKP-YRCEVCDKRYKNLNGLKYHRKHSH 422
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 526-638 2.78e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 40.86  E-value: 2.78e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164644489 526 QEIAEDELARDW-----TKRRMKDDLVPETKrlNYTRPGLPKLNPRLLESWKNEVKEKGH--INCPNNCCEAIYSSVSGL 598
Cdd:COG5189   290 EFIHKSVGNKEIrggisTGEMIDVRKLPCTN--SSSNGKLAHGGERNIDTPSRMLKVKDGkpYKCPVEGCNKKYKNQNGL 367

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2164644489 599 KAHL--ANCNKGEHSVGK-------------YRCLLCQKEFSSESGVKYHIIKAH 638
Cdd:COG5189   368 KYHMlhGHQNQKLHENPSpekmnifsakdkpYRCEVCDKRYKNLNGLKYHRKHSH 422
 
Name Accession Description Interval E-value
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 371-446 3.21e-04

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 43.94  E-value: 3.21e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2164644489 371 CKKQFKSKAGLNYHTMAEHVSKGCAANFSSLMGYQYHQKrcgkqlaeaDKPvFSCPHCGKKYKSKAGHDYHVRSEH 446
Cdd:COG5189   357 CNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAK---------DKP-YRCEVCDKRYKNLNGLKYHRKHSH 422
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 526-638 2.78e-03

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 40.86  E-value: 2.78e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164644489 526 QEIAEDELARDW-----TKRRMKDDLVPETKrlNYTRPGLPKLNPRLLESWKNEVKEKGH--INCPNNCCEAIYSSVSGL 598
Cdd:COG5189   290 EFIHKSVGNKEIrggisTGEMIDVRKLPCTN--SSSNGKLAHGGERNIDTPSRMLKVKDGkpYKCPVEGCNKKYKNQNGL 367

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2164644489 599 KAHL--ANCNKGEHSVGK-------------YRCLLCQKEFSSESGVKYHIIKAH 638
Cdd:COG5189   368 KYHMlhGHQNQKLHENPSpekmnifsakdkpYRCEVCDKRYKNLNGLKYHRKHSH 422
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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