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Conserved domains on  [gi|251823802|ref|NP_077220|]
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ubiquitin carboxyl-terminal hydrolase 16 [Mus musculus]

Protein Classification

ubiquitin carboxyl-terminal hydrolase( domain architecture ID 13671551)

ubiquitin carboxyl-terminal hydrolase is a C19 family peptidase that deubiquitinates polyubiquitinated target proteins

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Peptidase_C19K cd02667
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
624-822 2.76e-80

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


:

Pssm-ID: 239132 [Multi-domain]  Cd Length: 279  Bit Score: 259.63  E-value: 2.76e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 624 REAFSTDECSIQHCLYQFTRNEKLQDANKLLCEVCsrrqcngpkanikgdrrhvyTNAKKQMLVSLAPPVLTLHLKRFQQ 703
Cdd:cd02667  103 RSDEIKSECSIESCLKQFTEVEILEGNNKFACENC--------------------TKAKKQYLISKLPPVLVIHLKRFQQ 162
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 704 AGF-NLRKVNKHIKFPEILDLAPFCTLKCkNVAEESTRVLYSLYGVVEHSGTMRSGHYTAYAKERTASCHLSNLVLHgdI 782
Cdd:cd02667  163 PRSaNLRKVSRHVSFPEILDLAPFCDPKC-NSSEDKSSVLYRLYGVVEHSGTMRSGHYVAYVKVRPPQQRLSDLTKS--K 239
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 251823802 783 PQDCEMESTKGQWFHISDTHVQAVPITKVLNSQAYLLFYE 822
Cdd:cd02667  240 PAADEAGPGSGQWYYISDSDVREVSLEEVLKSEAYLLFYE 279
Peptidase_C19 super family cl02553
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ...
196-401 7.26e-50

Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


The actual alignment was detected with superfamily member cd02667:

Pssm-ID: 470612 [Multi-domain]  Cd Length: 279  Bit Score: 176.81  E-value: 7.26e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 196 GLSNLGNTCFFNAVMQNLSQTPVLRELLKEvkmsgtivkieppdlalteplevnleppgpltlamsqflsemqenkkrvv 275
Cdd:cd02667    1 GLSNLGNTCFFNAVMQNLSQTPALRELLSE-------------------------------------------------- 30
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 276 TPKELFSQVCKKATRFKGYQQQDSQELLRYLLDGMRaeehqrvskgilkafgnstekldeevknkvkdyekkkaipSFVD 355
Cdd:cd02667   31 TPKELFSQVCRKAPQFKGYQQQDSHELLRYLLDGLR----------------------------------------TFID 70
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 251823802 356 RIFGGELTSTIMCDECRTVSLVHESFLDLSLPVLDDQSGKKSINDK 401
Cdd:cd02667   71 SIFGGELTSTIMCESCGTVSLVYEPFLDLSLPRSDEIKSECSIESC 116
UBP12 super family cl35019
Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones];
135-823 1.12e-34

Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones];


The actual alignment was detected with superfamily member COG5560:

Pssm-ID: 227847 [Multi-domain]  Cd Length: 823  Bit Score: 142.33  E-value: 1.12e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 135 DYVRKQAGVRTSKPAEKNN-GHIELENKKLEKESKNEQEREKSENLAKETIPM-----DSASQ---------ITVKGLSN 199
Cdd:COG5560  191 DVVPEIMGLRLGLDSFFRRyRVLASDGRVLHPLTRLELFEDRSVLLLSKITRNpdwlvDSIVDdhnrsinkeAGTCGLRN 270
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 200 LGNTCFFNAVMQNLSQTPVLRE--LLKEVKMsgtivkieppdlalteplEVNLEPP----GPLTLAMSQFLSEMQENKKR 273
Cdd:COG5560  271 LGNTCYMNSALQCLMHTWELRDyfLSDEYEE------------------SINEENPlgmhGSVASAYADLIKQLYDGNLH 332
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 274 VVTPKELFSQVCKKATRFKGYQQQDSQELLRYLLDGMraeeHQRVSKGILKAFG---NSTEKLDEEVKNKVKD--YEKKK 348
Cdd:COG5560  333 AFTPSGFKKTIGSFNEEFSGYDQQDSQEFIAFLLDGL----HEDLNRIIKKPYTskpDLSPGDDVVVKKKAKEcwWEHLK 408
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 349 AIPSFVDRIFGGELTSTIMCDECRTVSLVHESFLDLSLPVLDDQSGKKSIN----DKNVKMTMEEEDKDSEEEKDDSYMK 424
Cdd:COG5560  409 RNDSIITDLFQGMYKSTLTCPGCGSVSITFDPFMDLTLPLPVSMVWKHTIVvfpeSGRRQPLKIELDASSTIRGLKKLVD 488
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 425 SRSDLpSGTSKHLQKKAKKQAKKQAKNQRR---QQKI-QERFLHFNElcatdyTEDNereadtalagEVEVDTdsTHGSQ 500
Cdd:COG5560  489 AEYGK-LGCFEIKVMCIYYGGNYNMLEPADkvlLQDIpQTDFVYLYE------TNDN----------GIEVPV--VHLRI 549
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 501 EEATQ---------IELSVNQKdldgqeSMIerTPDVQESPEDLGVKSANTESDLGIVTPAPECPRDfngaflEERTSGE 571
Cdd:COG5560  550 EKGYKskrlfgdpfLQLNVLIK------ASI--YDKLVKEFEELLVLVEMKKTDVDLVSEQVRLLRE------ESSPSSW 615
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 572 LDIINGLKNLNL------NAAVDPDEINIEIpndSHSAPKVYEVMNEDPETAFCTLANREAFSTdecsIQHCLYQFTRNE 645
Cdd:COG5560  616 LKLETEIDTKREeqveeeGQMNFNDAVVISC---EWEEKRYLSLFSYDPLWTIREIGAAERTIT----LQDCLNEFSKPE 688
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 646 KLQDANKLLCEVCsrrqcngpkaniKGDRRhvytnAKKQMLVSLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPeILDLap 725
Cdd:COG5560  689 QLGLSDSWYCPGC------------KEFRQ-----ASKQMELWRLPMILIIHLKRFSSVRSFRDKIDDLVEYP-IDDL-- 748
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 726 fcTLKCKNVAEESTRVLYSLYGVVEHSGTMRSGHYTAYAKertaschlsnlvlhgdipqdcemESTKGQWFHISDTHVQA 805
Cdd:COG5560  749 --DLSGVEYMVDDPRLIYDLYAVDNHYGGLSGGHYTAYAR-----------------------NFANNGWYLFDDSRITE 803
                        730
                 ....*....|....*...
gi 251823802 806 VPITKVLNSQAYLLFYER 823
Cdd:COG5560  804 VDPEDSVTSSAYVLFYRR 821
zf-UBP pfam02148
Zn-finger in ubiquitin-hydrolases and other protein;
48-122 2.03e-19

Zn-finger in ubiquitin-hydrolases and other protein;


:

Pssm-ID: 460464  Cd Length: 63  Bit Score: 82.69  E-value: 2.03e-19
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 251823802   48 CQDCKTDNkvkdkpeeeaedpSVWLCLKCGHQGCGRdSQEQHALKHYTTPRsepHYLVLSLDNWSVWCYKCDEEV 122
Cdd:pfam02148   1 CSLCGNTS-------------NLWLCLTCGHVGCGR-YQNSHALEHYEETG---HPLAVNLSTLTVYCYPCDDYV 58
 
Name Accession Description Interval E-value
Peptidase_C19K cd02667
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
624-822 2.76e-80

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239132 [Multi-domain]  Cd Length: 279  Bit Score: 259.63  E-value: 2.76e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 624 REAFSTDECSIQHCLYQFTRNEKLQDANKLLCEVCsrrqcngpkanikgdrrhvyTNAKKQMLVSLAPPVLTLHLKRFQQ 703
Cdd:cd02667  103 RSDEIKSECSIESCLKQFTEVEILEGNNKFACENC--------------------TKAKKQYLISKLPPVLVIHLKRFQQ 162
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 704 AGF-NLRKVNKHIKFPEILDLAPFCTLKCkNVAEESTRVLYSLYGVVEHSGTMRSGHYTAYAKERTASCHLSNLVLHgdI 782
Cdd:cd02667  163 PRSaNLRKVSRHVSFPEILDLAPFCDPKC-NSSEDKSSVLYRLYGVVEHSGTMRSGHYVAYVKVRPPQQRLSDLTKS--K 239
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 251823802 783 PQDCEMESTKGQWFHISDTHVQAVPITKVLNSQAYLLFYE 822
Cdd:cd02667  240 PAADEAGPGSGQWYYISDSDVREVSLEEVLKSEAYLLFYE 279
Peptidase_C19K cd02667
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
196-401 7.26e-50

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239132 [Multi-domain]  Cd Length: 279  Bit Score: 176.81  E-value: 7.26e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 196 GLSNLGNTCFFNAVMQNLSQTPVLRELLKEvkmsgtivkieppdlalteplevnleppgpltlamsqflsemqenkkrvv 275
Cdd:cd02667    1 GLSNLGNTCFFNAVMQNLSQTPALRELLSE-------------------------------------------------- 30
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 276 TPKELFSQVCKKATRFKGYQQQDSQELLRYLLDGMRaeehqrvskgilkafgnstekldeevknkvkdyekkkaipSFVD 355
Cdd:cd02667   31 TPKELFSQVCRKAPQFKGYQQQDSHELLRYLLDGLR----------------------------------------TFID 70
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 251823802 356 RIFGGELTSTIMCDECRTVSLVHESFLDLSLPVLDDQSGKKSINDK 401
Cdd:cd02667   71 SIFGGELTSTIMCESCGTVSLVYEPFLDLSLPRSDEIKSECSIESC 116
UBP12 COG5560
Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones];
135-823 1.12e-34

Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227847 [Multi-domain]  Cd Length: 823  Bit Score: 142.33  E-value: 1.12e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 135 DYVRKQAGVRTSKPAEKNN-GHIELENKKLEKESKNEQEREKSENLAKETIPM-----DSASQ---------ITVKGLSN 199
Cdd:COG5560  191 DVVPEIMGLRLGLDSFFRRyRVLASDGRVLHPLTRLELFEDRSVLLLSKITRNpdwlvDSIVDdhnrsinkeAGTCGLRN 270
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 200 LGNTCFFNAVMQNLSQTPVLRE--LLKEVKMsgtivkieppdlalteplEVNLEPP----GPLTLAMSQFLSEMQENKKR 273
Cdd:COG5560  271 LGNTCYMNSALQCLMHTWELRDyfLSDEYEE------------------SINEENPlgmhGSVASAYADLIKQLYDGNLH 332
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 274 VVTPKELFSQVCKKATRFKGYQQQDSQELLRYLLDGMraeeHQRVSKGILKAFG---NSTEKLDEEVKNKVKD--YEKKK 348
Cdd:COG5560  333 AFTPSGFKKTIGSFNEEFSGYDQQDSQEFIAFLLDGL----HEDLNRIIKKPYTskpDLSPGDDVVVKKKAKEcwWEHLK 408
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 349 AIPSFVDRIFGGELTSTIMCDECRTVSLVHESFLDLSLPVLDDQSGKKSIN----DKNVKMTMEEEDKDSEEEKDDSYMK 424
Cdd:COG5560  409 RNDSIITDLFQGMYKSTLTCPGCGSVSITFDPFMDLTLPLPVSMVWKHTIVvfpeSGRRQPLKIELDASSTIRGLKKLVD 488
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 425 SRSDLpSGTSKHLQKKAKKQAKKQAKNQRR---QQKI-QERFLHFNElcatdyTEDNereadtalagEVEVDTdsTHGSQ 500
Cdd:COG5560  489 AEYGK-LGCFEIKVMCIYYGGNYNMLEPADkvlLQDIpQTDFVYLYE------TNDN----------GIEVPV--VHLRI 549
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 501 EEATQ---------IELSVNQKdldgqeSMIerTPDVQESPEDLGVKSANTESDLGIVTPAPECPRDfngaflEERTSGE 571
Cdd:COG5560  550 EKGYKskrlfgdpfLQLNVLIK------ASI--YDKLVKEFEELLVLVEMKKTDVDLVSEQVRLLRE------ESSPSSW 615
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 572 LDIINGLKNLNL------NAAVDPDEINIEIpndSHSAPKVYEVMNEDPETAFCTLANREAFSTdecsIQHCLYQFTRNE 645
Cdd:COG5560  616 LKLETEIDTKREeqveeeGQMNFNDAVVISC---EWEEKRYLSLFSYDPLWTIREIGAAERTIT----LQDCLNEFSKPE 688
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 646 KLQDANKLLCEVCsrrqcngpkaniKGDRRhvytnAKKQMLVSLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPeILDLap 725
Cdd:COG5560  689 QLGLSDSWYCPGC------------KEFRQ-----ASKQMELWRLPMILIIHLKRFSSVRSFRDKIDDLVEYP-IDDL-- 748
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 726 fcTLKCKNVAEESTRVLYSLYGVVEHSGTMRSGHYTAYAKertaschlsnlvlhgdipqdcemESTKGQWFHISDTHVQA 805
Cdd:COG5560  749 --DLSGVEYMVDDPRLIYDLYAVDNHYGGLSGGHYTAYAR-----------------------NFANNGWYLFDDSRITE 803
                        730
                 ....*....|....*...
gi 251823802 806 VPITKVLNSQAYLLFYER 823
Cdd:COG5560  804 VDPEDSVTSSAYVLFYRR 821
UCH pfam00443
Ubiquitin carboxyl-terminal hydrolase;
612-821 1.62e-33

Ubiquitin carboxyl-terminal hydrolase;


Pssm-ID: 425685 [Multi-domain]  Cd Length: 310  Bit Score: 131.41  E-value: 1.62e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802  612 EDPETAFCTLANREAFSTDECSIQHCLYQFTRNEKLQDANKLLCEVCSRRQcngpkanikgdrrhvytNAKKQMLVSLAP 691
Cdd:pfam00443 142 FEPFSDLSLPIPGDSAELKTASLQICFLQFSKLEELDDEEKYYCDKCGCKQ-----------------DAIKQLKISRLP 204
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802  692 PVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKnvAEESTRVLYSLYGVVEHSGTMRSGHYTAYAKertasc 771
Cdd:pfam00443 205 PVLIIHLKRFSYNRSTWEKLNTEVEFPLELDLSRYLAEELK--PKTNNLQDYRLVAVVVHSGSLSSGHYIAYIK------ 276
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 251823802  772 hlsnlvlhgdipqdcemESTKGQWFHISDTHVQAV-PITKVLNSQAYLLFY 821
Cdd:pfam00443 277 -----------------AYENNRWYKFDDEKVTEVdEETAVLSSSAYILFY 310
UCH pfam00443
Ubiquitin carboxyl-terminal hydrolase;
196-393 1.20e-28

Ubiquitin carboxyl-terminal hydrolase;


Pssm-ID: 425685 [Multi-domain]  Cd Length: 310  Bit Score: 117.16  E-value: 1.20e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802  196 GLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKieppdlaltEPLEVNLeppgplTLAMSQFLSEMQENKK-RV 274
Cdd:pfam00443   2 GLVNLGNTCYMNSVLQSLFSIPPFRDYLLRISPLSEDSR---------YNKDINL------LCALRDLFKALQKNSKsSS 66
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802  275 VTPKELFSQVCKKATRFKGYQQQDSQELLRYLLDGmraeehqrvskgilkafgnstekLDEEVKNKVkdyekKKAIPSFV 354
Cdd:pfam00443  67 VSPKMFKKSLGKLNPDFSGYKQQDAQEFLLFLLDG-----------------------LHEDLNGNH-----STENESLI 118
                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 251823802  355 DRIFGGELTSTIMCDECRTVSLVHESFLDLSLPVLDDQS 393
Cdd:pfam00443 119 TDLFRGQLKSRLKCLSCGEVSETFEPFSDLSLPIPGDSA 157
zf-UBP pfam02148
Zn-finger in ubiquitin-hydrolases and other protein;
48-122 2.03e-19

Zn-finger in ubiquitin-hydrolases and other protein;


Pssm-ID: 460464  Cd Length: 63  Bit Score: 82.69  E-value: 2.03e-19
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 251823802   48 CQDCKTDNkvkdkpeeeaedpSVWLCLKCGHQGCGRdSQEQHALKHYTTPRsepHYLVLSLDNWSVWCYKCDEEV 122
Cdd:pfam02148   1 CSLCGNTS-------------NLWLCLTCGHVGCGR-YQNSHALEHYEETG---HPLAVNLSTLTVYCYPCDDYV 58
COG5077 COG5077
Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, ...
676-812 6.31e-11

Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227409 [Multi-domain]  Cd Length: 1089  Bit Score: 66.43  E-value: 6.31e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802  676 HVYTNAKKQMLVSLAPPVLTLHLKRFQqAGF---NLRKVNKHIKFPEILDLAPFCTLKCKNvaEESTRVLYSLYGVVEHS 752
Cdd:COG5077   364 HGLQDAKKGVIFESLPPVLHLQLKRFE-YDFerdMMVKINDRYEFPLEIDLLPFLDRDADK--SENSDAVYVLYGVLVHS 440
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802  753 GTMRSGHYTAYAKertaschlsnlvlhgdipqdcemESTKGQWFHISDTHVQAVPITKVL 812
Cdd:COG5077   441 GDLHEGHYYALLK-----------------------PEKDGRWYKFDDTRVTRATEKEVL 477
ZnF_UBP smart00290
Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger;
47-113 1.13e-07

Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger;


Pssm-ID: 197632  Cd Length: 50  Bit Score: 48.90  E-value: 1.13e-07
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 251823802    47 ICQDCKTDNKVkdkpeeeaedpsvWLCLKCGHQGCGRdSQEQHALKHYttpRSEPHYLVLSLDNWSV 113
Cdd:smart00290   1 RCSVCGTIENL-------------WLCLTCGQVGCGR-YQNGHALEHF---EETGHPLVVKLGTQRV 50
 
Name Accession Description Interval E-value
Peptidase_C19K cd02667
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
624-822 2.76e-80

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239132 [Multi-domain]  Cd Length: 279  Bit Score: 259.63  E-value: 2.76e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 624 REAFSTDECSIQHCLYQFTRNEKLQDANKLLCEVCsrrqcngpkanikgdrrhvyTNAKKQMLVSLAPPVLTLHLKRFQQ 703
Cdd:cd02667  103 RSDEIKSECSIESCLKQFTEVEILEGNNKFACENC--------------------TKAKKQYLISKLPPVLVIHLKRFQQ 162
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 704 AGF-NLRKVNKHIKFPEILDLAPFCTLKCkNVAEESTRVLYSLYGVVEHSGTMRSGHYTAYAKERTASCHLSNLVLHgdI 782
Cdd:cd02667  163 PRSaNLRKVSRHVSFPEILDLAPFCDPKC-NSSEDKSSVLYRLYGVVEHSGTMRSGHYVAYVKVRPPQQRLSDLTKS--K 239
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 251823802 783 PQDCEMESTKGQWFHISDTHVQAVPITKVLNSQAYLLFYE 822
Cdd:cd02667  240 PAADEAGPGSGQWYYISDSDVREVSLEEVLKSEAYLLFYE 279
Peptidase_C19K cd02667
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
196-401 7.26e-50

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239132 [Multi-domain]  Cd Length: 279  Bit Score: 176.81  E-value: 7.26e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 196 GLSNLGNTCFFNAVMQNLSQTPVLRELLKEvkmsgtivkieppdlalteplevnleppgpltlamsqflsemqenkkrvv 275
Cdd:cd02667    1 GLSNLGNTCFFNAVMQNLSQTPALRELLSE-------------------------------------------------- 30
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 276 TPKELFSQVCKKATRFKGYQQQDSQELLRYLLDGMRaeehqrvskgilkafgnstekldeevknkvkdyekkkaipSFVD 355
Cdd:cd02667   31 TPKELFSQVCRKAPQFKGYQQQDSHELLRYLLDGLR----------------------------------------TFID 70
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 251823802 356 RIFGGELTSTIMCDECRTVSLVHESFLDLSLPVLDDQSGKKSINDK 401
Cdd:cd02667   71 SIFGGELTSTIMCESCGTVSLVYEPFLDLSLPRSDEIKSECSIESC 116
Peptidase_C19E cd02661
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
633-821 1.59e-40

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239126 [Multi-domain]  Cd Length: 304  Bit Score: 151.27  E-value: 1.59e-40
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 633 SIQHCLYQFTRNEKLQDANKLLCEVCSRrqcngpkanikgdrrhvYTNAKKQMLVSLAPPVLTLHLKRFQqaGFNLRKVN 712
Cdd:cd02661  163 SLEDALEQFTKPEQLDGENKYKCERCKK-----------------KVKASKQLTIHRAPNVLTIHLKRFS--NFRGGKIN 223
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 713 KHIKFPEILDLAPFCTlkckNVAEESTRvlYSLYGVVEHSGT-MRSGHYTAYAKertaschlsnlvlhgdipqdcemeST 791
Cdd:cd02661  224 KQISFPETLDLSPYMS----QPNDGPLK--YKLYAVLVHSGFsPHSGHYYCYVK------------------------SS 273
                        170       180       190
                 ....*....|....*....|....*....|
gi 251823802 792 KGQWFHISDTHVQAVPITKVLNSQAYLLFY 821
Cdd:cd02661  274 NGKWYNMDDSKVSPVSIETVLSQKAYILFY 303
Peptidase_C19 cd02257
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ...
628-822 1.10e-39

Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239072 [Multi-domain]  Cd Length: 255  Bit Score: 147.24  E-value: 1.10e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 628 STDECSIQHCLYQFTRNEKLQDANKLLCEvcsrrqcngpkanikgdrRHVYTNAKKQMLVSLAPPVLTLHLKRFQQAG-F 706
Cdd:cd02257   95 GLPQVSLEDCLEKFFKEEILEGDNCYKCE------------------KKKKQEATKRLKIKKLPPVLIIHLKRFSFNEdG 156
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 707 NLRKVNKHIKFPEILDLAPFCTLKCKNVAEESTRVLYSLYGVVEHSGT-MRSGHYTAYAKERtaschlsnlvlhgdipqd 785
Cdd:cd02257  157 TKEKLNTKVSFPLELDLSPYLSEGEKDSDSDNGSYKYELVAVVVHSGTsADSGHYVAYVKDP------------------ 218
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 251823802 786 cemesTKGQWFHISDTHVQAVPITKVL-----NSQAYLLFYE 822
Cdd:cd02257  219 -----SDGKWYKFNDDKVTEVSEEEVLefgslSSSAYILFYE 255
Peptidase_C19R cd02674
A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
628-822 1.11e-34

A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239139 [Multi-domain]  Cd Length: 230  Bit Score: 132.03  E-value: 1.11e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 628 STDECSIQHCLYQFTRNEKLQDANKLLCEVCSRRQCngpkanikgdrrhvytnAKKQMLVSLAPPVLTLHLKRFQQAGFN 707
Cdd:cd02674   80 DAPKVTLEDCLRLFTKEETLDGDNAWKCPKCKKKRK-----------------ATKKLTISRLPKVLIIHLKRFSFSRGS 142
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 708 LRKVNKHIKFP-EILDLAPFCTLKCKNvaeesTRVLYSLYGVVEHSGTMRSGHYTAYAKertaschlsnlvlhgdipqdc 786
Cdd:cd02674  143 TRKLTTPVTFPlNDLDLTPYVDTRSFT-----GPFKYDLYAVVNHYGSLNGGHYTAYCK--------------------- 196
                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 251823802 787 emESTKGQWFHISDTHVQAVPITKVLNSQAYLLFYE 822
Cdd:cd02674  197 --NNETNDWYKFDDSRVTKVSESSVVSSSAYILFYE 230
UBP12 COG5560
Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones];
135-823 1.12e-34

Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227847 [Multi-domain]  Cd Length: 823  Bit Score: 142.33  E-value: 1.12e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 135 DYVRKQAGVRTSKPAEKNN-GHIELENKKLEKESKNEQEREKSENLAKETIPM-----DSASQ---------ITVKGLSN 199
Cdd:COG5560  191 DVVPEIMGLRLGLDSFFRRyRVLASDGRVLHPLTRLELFEDRSVLLLSKITRNpdwlvDSIVDdhnrsinkeAGTCGLRN 270
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 200 LGNTCFFNAVMQNLSQTPVLRE--LLKEVKMsgtivkieppdlalteplEVNLEPP----GPLTLAMSQFLSEMQENKKR 273
Cdd:COG5560  271 LGNTCYMNSALQCLMHTWELRDyfLSDEYEE------------------SINEENPlgmhGSVASAYADLIKQLYDGNLH 332
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 274 VVTPKELFSQVCKKATRFKGYQQQDSQELLRYLLDGMraeeHQRVSKGILKAFG---NSTEKLDEEVKNKVKD--YEKKK 348
Cdd:COG5560  333 AFTPSGFKKTIGSFNEEFSGYDQQDSQEFIAFLLDGL----HEDLNRIIKKPYTskpDLSPGDDVVVKKKAKEcwWEHLK 408
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 349 AIPSFVDRIFGGELTSTIMCDECRTVSLVHESFLDLSLPVLDDQSGKKSIN----DKNVKMTMEEEDKDSEEEKDDSYMK 424
Cdd:COG5560  409 RNDSIITDLFQGMYKSTLTCPGCGSVSITFDPFMDLTLPLPVSMVWKHTIVvfpeSGRRQPLKIELDASSTIRGLKKLVD 488
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 425 SRSDLpSGTSKHLQKKAKKQAKKQAKNQRR---QQKI-QERFLHFNElcatdyTEDNereadtalagEVEVDTdsTHGSQ 500
Cdd:COG5560  489 AEYGK-LGCFEIKVMCIYYGGNYNMLEPADkvlLQDIpQTDFVYLYE------TNDN----------GIEVPV--VHLRI 549
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 501 EEATQ---------IELSVNQKdldgqeSMIerTPDVQESPEDLGVKSANTESDLGIVTPAPECPRDfngaflEERTSGE 571
Cdd:COG5560  550 EKGYKskrlfgdpfLQLNVLIK------ASI--YDKLVKEFEELLVLVEMKKTDVDLVSEQVRLLRE------ESSPSSW 615
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 572 LDIINGLKNLNL------NAAVDPDEINIEIpndSHSAPKVYEVMNEDPETAFCTLANREAFSTdecsIQHCLYQFTRNE 645
Cdd:COG5560  616 LKLETEIDTKREeqveeeGQMNFNDAVVISC---EWEEKRYLSLFSYDPLWTIREIGAAERTIT----LQDCLNEFSKPE 688
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 646 KLQDANKLLCEVCsrrqcngpkaniKGDRRhvytnAKKQMLVSLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPeILDLap 725
Cdd:COG5560  689 QLGLSDSWYCPGC------------KEFRQ-----ASKQMELWRLPMILIIHLKRFSSVRSFRDKIDDLVEYP-IDDL-- 748
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 726 fcTLKCKNVAEESTRVLYSLYGVVEHSGTMRSGHYTAYAKertaschlsnlvlhgdipqdcemESTKGQWFHISDTHVQA 805
Cdd:COG5560  749 --DLSGVEYMVDDPRLIYDLYAVDNHYGGLSGGHYTAYAR-----------------------NFANNGWYLFDDSRITE 803
                        730
                 ....*....|....*...
gi 251823802 806 VPITKVLNSQAYLLFYER 823
Cdd:COG5560  804 VDPEDSVTSSAYVLFYRR 821
UCH pfam00443
Ubiquitin carboxyl-terminal hydrolase;
612-821 1.62e-33

Ubiquitin carboxyl-terminal hydrolase;


Pssm-ID: 425685 [Multi-domain]  Cd Length: 310  Bit Score: 131.41  E-value: 1.62e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802  612 EDPETAFCTLANREAFSTDECSIQHCLYQFTRNEKLQDANKLLCEVCSRRQcngpkanikgdrrhvytNAKKQMLVSLAP 691
Cdd:pfam00443 142 FEPFSDLSLPIPGDSAELKTASLQICFLQFSKLEELDDEEKYYCDKCGCKQ-----------------DAIKQLKISRLP 204
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802  692 PVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKnvAEESTRVLYSLYGVVEHSGTMRSGHYTAYAKertasc 771
Cdd:pfam00443 205 PVLIIHLKRFSYNRSTWEKLNTEVEFPLELDLSRYLAEELK--PKTNNLQDYRLVAVVVHSGSLSSGHYIAYIK------ 276
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 251823802  772 hlsnlvlhgdipqdcemESTKGQWFHISDTHVQAV-PITKVLNSQAYLLFY 821
Cdd:pfam00443 277 -----------------AYENNRWYKFDDEKVTEVdEETAVLSSSAYILFY 310
Peptidase_C19D cd02660
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
633-821 1.66e-29

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239125 [Multi-domain]  Cd Length: 328  Bit Score: 120.17  E-value: 1.66e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 633 SIQHCLYQFTRNEKLQDANkLLCEVCSRRQcngpkanikgdrrhvytNAKKQMLVSLAPPVLTLHLKRFQQAGFNL-RKV 711
Cdd:cd02660  177 TLSDCLDRFTRPEKLGDFA-YKCSGCGSTQ-----------------EATKQLSIKKLPPVLCFQLKRFEHSLNKTsRKI 238
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 712 NKHIKFPEILDLAPFCTLKCKNVAEES---TRVLYSLYGVVEHSGTMRSGHYTAYAKERtaschlsnlvlhgdipqdcem 788
Cdd:cd02660  239 DTYVQFPLELNMTPYTSSSIGDTQDSNsldPDYTYDLFAVVVHKGTLDTGHYTAYCRQG--------------------- 297
                        170       180       190
                 ....*....|....*....|....*....|...
gi 251823802 789 estKGQWFHISDTHVQAVPITKVLNSQAYLLFY 821
Cdd:cd02660  298 ---DGQWFKFDDAMITRVSEEEVLKSQAYLLFY 327
UCH pfam00443
Ubiquitin carboxyl-terminal hydrolase;
196-393 1.20e-28

Ubiquitin carboxyl-terminal hydrolase;


Pssm-ID: 425685 [Multi-domain]  Cd Length: 310  Bit Score: 117.16  E-value: 1.20e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802  196 GLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKieppdlaltEPLEVNLeppgplTLAMSQFLSEMQENKK-RV 274
Cdd:pfam00443   2 GLVNLGNTCYMNSVLQSLFSIPPFRDYLLRISPLSEDSR---------YNKDINL------LCALRDLFKALQKNSKsSS 66
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802  275 VTPKELFSQVCKKATRFKGYQQQDSQELLRYLLDGmraeehqrvskgilkafgnstekLDEEVKNKVkdyekKKAIPSFV 354
Cdd:pfam00443  67 VSPKMFKKSLGKLNPDFSGYKQQDAQEFLLFLLDG-----------------------LHEDLNGNH-----STENESLI 118
                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 251823802  355 DRIFGGELTSTIMCDECRTVSLVHESFLDLSLPVLDDQS 393
Cdd:pfam00443 119 TDLFRGQLKSRLKCLSCGEVSETFEPFSDLSLPIPGDSA 157
peptidase_C19C cd02659
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
633-824 9.87e-25

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239124 [Multi-domain]  Cd Length: 334  Bit Score: 106.19  E-value: 9.87e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 633 SIQHCLYQFTRNEKLQDANKLLCEVCSRRQcngpkanikgdrrhvytNAKKQMLVSLAPPVLTLHLKRFQqagFNL---- 708
Cdd:cd02659  152 NLEESLDAYVQGETLEGDNKYFCEKCGKKV-----------------DAEKGVCFKKLPPVLTLQLKRFE---FDFetmm 211
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 709 -RKVNKHIKFPEILDLAPFC--TLKCKNVAEESTRV---LYSLYGVVEHSGTMRSGHYTAYAKERtaschlsnlvlhgdi 782
Cdd:cd02659  212 rIKINDRFEFPLELDMEPYTekGLAKKEGDSEKKDSesyIYELHGVLVHSGDAHGGHYYSYIKDR--------------- 276
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 251823802 783 pqdcemesTKGQWFHISDTHV----------------------QAVPITKVLNSQAYLLFYERI 824
Cdd:cd02659  277 --------DDGKWYKFNDDVVtpfdpndaeeecfggeetqktyDSGPRAFKRTTNAYMLFYERK 332
Peptidase_C19F cd02662
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
620-822 1.89e-21

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239127 [Multi-domain]  Cd Length: 240  Bit Score: 94.36  E-value: 1.89e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 620 TLANREAFSTDECSIQHCLYQFTRNEKLQDANkllCEVCsrrqcngpkanikgdrrhvytnakkQMLVSLAPPVLTLHLK 699
Cdd:cd02662   84 SLPVPNQSSGSGTTLEHCLDDFLSTEIIDDYK---CDRC-------------------------QTVIVRLPQILCIHLS 135
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 700 RFQQAGFN-LRKVNKHIKFPEILdlapfctlkcknvaeesTRVLYSLYGVVEHSGTMRSGHYTAYAKERTASCHLSNLVL 778
Cdd:cd02662  136 RSVFDGRGtSTKNSCKVSFPERL-----------------PKVLYRLRAVVVHYGSHSSGHYVCYRRKPLFSKDKEPGSF 198
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 251823802 779 HGDIPQDCemeSTKGQWFHISDTHVQAVPITKVL-NSQAYLLFYE 822
Cdd:cd02662  199 VRMREGPS---STSHPWWRISDTTVKEVSESEVLeQKSAYMLFYE 240
Peptidase_C19E cd02661
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
196-397 3.23e-20

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239126 [Multi-domain]  Cd Length: 304  Bit Score: 91.95  E-value: 3.23e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 196 GLSNLGNTCFFNAVMQNLSQTPVLRELLkevkmsgtivkieppdlaLTEPLEVNLEPPGPLTL-AMSQFLSEMQENKKRV 274
Cdd:cd02661    3 GLQNLGNTCFLNSVLQCLTHTPPLANYL------------------LSREHSKDCCNEGFCMMcALEAHVERALASSGPG 64
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 275 VTPKELFSQVCKKATRFKGYQQQDSQELLRYLLDGMRaeehqrvsKGILKAFGNStekldEEVKNKVKDYekkkaipSFV 354
Cdd:cd02661   65 SAPRIFSSNLKQISKHFRIGRQEDAHEFLRYLLDAMQ--------KACLDRFKKL-----KAVDPSSQET-------TLV 124
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|...
gi 251823802 355 DRIFGGELTSTIMCDECRTVSLVHESFLDLSLPVLDDQSGKKS 397
Cdd:cd02661  125 QQIFGGYLRSQVKCLNCKHVSNTYDPFLDLSLDIKGADSLEDA 167
zf-UBP pfam02148
Zn-finger in ubiquitin-hydrolases and other protein;
48-122 2.03e-19

Zn-finger in ubiquitin-hydrolases and other protein;


Pssm-ID: 460464  Cd Length: 63  Bit Score: 82.69  E-value: 2.03e-19
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 251823802   48 CQDCKTDNkvkdkpeeeaedpSVWLCLKCGHQGCGRdSQEQHALKHYTTPRsepHYLVLSLDNWSVWCYKCDEEV 122
Cdd:pfam02148   1 CSLCGNTS-------------NLWLCLTCGHVGCGR-YQNSHALEHYEETG---HPLAVNLSTLTVYCYPCDDYV 58
Peptidase_C19H cd02664
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
632-822 8.08e-18

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239129 [Multi-domain]  Cd Length: 327  Bit Score: 85.62  E-value: 8.08e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 632 CSIQHCLYQFTRNEKLQDANKLLCEVCSRRQcngpkanikgdrrhvytNAKKQMLVSLAPPVLTLHLKRFQ--QAGFNLR 709
Cdd:cd02664  134 PSVQDLLNYFLSPEKLTGDNQYYCEKCASLQ-----------------DAEKEMKVTGAPEYLILTLLRFSydQKTHVRE 196
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 710 KVNKHIKFPEILDL-----------APFCTLKCKNVAEES--TRVLYSLYGVVEHSGT-MRSGHYTAYAKERTASchlSN 775
Cdd:cd02664  197 KIMDNVSINEVLSLpvrveskssesPLEKKEEESGDDGELvtRQVHYRLYAVVVHSGYsSESGHYFTYARDQTDA---DS 273
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 251823802 776 LVLHGDIPQDCEMESTKGQWFHISDTHVQAVPITKVLNSQ-------AYLLFYE 822
Cdd:cd02664  274 TGQECPEPKDAEENDESKNWYLFNDSRVTFSSFESVQNVTsrfpkdtPYILFYE 327
Peptidase_C19D cd02660
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
195-397 1.46e-16

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239125 [Multi-domain]  Cd Length: 328  Bit Score: 81.65  E-value: 1.46e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 195 KGLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLalteplevnleppgpLTLAMSQFLSEMQENKKRV 274
Cdd:cd02660    1 RGLINLGATCFMNVILQALLHNPLLRNYFLSDRHSCTCLSCSPNSC---------------LSCAMDEIFQEFYYSGDRS 65
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 275 -VTPKELFSQVCKKATRFKGYQQQDSQELLRYLLDGMraeeHQRVSKGilkafgnstekldeevknkVKDYEKKKAIPSF 353
Cdd:cd02660   66 pYGPINLLYLSWKHSRNLAGYSQQDAHEFFQFLLDQL----HTHYGGD-------------------KNEANDESHCNCI 122
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....
gi 251823802 354 VDRIFGGELTSTIMCDECRTVSLVHESFLDLSLPvLDDQSGKKS 397
Cdd:cd02660  123 IHQTFSGSLQSSVTCQRCGGVSTTVDPFLDLSLD-IPNKSTPSW 165
Peptidase_C19A cd02657
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
196-392 2.06e-16

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239122 [Multi-domain]  Cd Length: 305  Bit Score: 80.84  E-value: 2.06e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 196 GLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVkieppdlalteplevnLEPPGPLTLAMSQFLSEMQeNKKRVV 275
Cdd:cd02657    1 GLTNLGNTCYLNSTLQCLRSVPELRDALKNYNPARRGA----------------NQSSDNLTNALRDLFDTMD-KKQEPV 63
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 276 TPKELFSQVCKKATRFK------GYQQQDSQELLrylldgmraeehqrvsKGILKAFGNSTEKLDEEvknkvkdyekkka 349
Cdd:cd02657   64 PPIEFLQLLRMAFPQFAekqnqgGYAQQDAEECW----------------SQLLSVLSQKLPGAGSK------------- 114
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....
gi 251823802 350 iPSFVDRIFGGELTSTIMCDECRTVSLVH-ESFLDLSLPVLDDQ 392
Cdd:cd02657  115 -GSFIDQLFGIELETKMKCTESPDEEEVStESEYKLQCHISITT 157
Peptidase_C19L cd02668
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
633-810 5.07e-16

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239133 [Multi-domain]  Cd Length: 324  Bit Score: 80.16  E-value: 5.07e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 633 SIQHCLYQFTRNEKLQDANKLLCEVCSRRQcngpkanikgdrrhvytNAKKQMLVSLAPPVLTLHLKRF---QQAGfNLR 709
Cdd:cd02668  157 TLEECIDEFLKEEQLTGDNQYFCESCNSKT-----------------DATRRIRLTTLPPTLNFQLLRFvfdRKTG-AKK 218
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 710 KVNKHIKFPEILDLAPFCTLKCKNVAEestrvlYSLYGVVEHSGT-MRSGHYTAYAKertaschlsnlvlhgdipqdcem 788
Cdd:cd02668  219 KLNASISFPEILDMGEYLAESDEGSYV------YELSGVLIHQGVsAYSGHYIAHIK----------------------- 269
                        170       180
                 ....*....|....*....|..
gi 251823802 789 ESTKGQWFHISDTHVQAVPITK 810
Cdd:cd02668  270 DEQTGEWYKFNDEDVEEMPGKP 291
Peptidase_C19G cd02663
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
631-822 6.11e-16

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239128 [Multi-domain]  Cd Length: 300  Bit Score: 79.28  E-value: 6.11e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 631 ECSIQHCLYQFTRNEKLQDANKLLCEVCSRRQcngpkanikgdrrhvytNAKKQMLVSLAPPVLTLHLKRFQQAGfnlrK 710
Cdd:cd02663  146 NTSITSCLRQFSATETLCGRNKFYCDECCSLQ-----------------EAEKRMKIKKLPKILALHLKRFKYDE----Q 204
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 711 VNKHIK------FPeiLDLAPFCTlkcKNVAEESTRvLYSLYGVVEH--SGTMRsGHYTAYAKertaschlsnlvlhgdi 782
Cdd:cd02663  205 LNRYIKlfyrvvFP--LELRLFNT---TDDAENPDR-LYELVAVVVHigGGPNH-GHYVSIVK----------------- 260
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 251823802 783 pqdcemesTKGQWFHISDTHVQAVPITKVLN--------SQAYLLFYE 822
Cdd:cd02663  261 --------SHGGWLLFDDETVEKIDENAVEEffgdspnqATAYVLFYQ 300
Peptidase_C19O cd02671
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
590-765 4.07e-15

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239136 [Multi-domain]  Cd Length: 332  Bit Score: 77.24  E-value: 4.07e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 590 DEINIEIPNDSHSAPKVYEVMNEDPETafctlanreafSTDECSIQHCLYQFTRNEKLQDANKLLCEVCsrrqcngpkan 669
Cdd:cd02671  149 DFQDISVPVQESELSKSEESSEISPDP-----------KTEMKTLKWAISQFASVERIVGEDKYFCENC----------- 206
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 670 ikgdrrHVYTNAKKQMLVSLAPPVLTLHLKRFQQAGF------NLRKVNKHIkfpeildLAPFcTLKCKNVAEESTRVLY 743
Cdd:cd02671  207 ------HHYTEAERSLLFDKLPEVITIHLKCFAANGSefdcygGLSKVNTPL-------LTPL-KLSLEEWSTKPKNDVY 272
                        170       180
                 ....*....|....*....|...
gi 251823802 744 SLYGVVEHSG-TMRSGHYTAYAK 765
Cdd:cd02671  273 RLFAVVMHSGaTISSGHYTAYVR 295
Peptidase_C19 cd02257
Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ...
196-400 1.35e-14

Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239072 [Multi-domain]  Cd Length: 255  Bit Score: 74.44  E-value: 1.35e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 196 GLSNLGNTCFFNAVMQNLSqtpvlrellkevkmsgtivkieppdlalteplevnleppgpltlamsqflsemqenkkrvv 275
Cdd:cd02257    1 GLNNLGNTCYLNSVLQALF------------------------------------------------------------- 19
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 276 tpkelfsqvckkatrfkgYQQQDSQELLRYLLDgmraeehqrvskgilkafgnsteKLDEEVKNKVKDYEKKKAIPSFVD 355
Cdd:cd02257   20 ------------------SEQQDAHEFLLFLLD-----------------------KLHEELKKSSKRTSDSSSLKSLIH 58
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 251823802 356 RIFGGELTSTIMCDECRTVSLVHESFLDLSLPVLDDQSGKKSIND 400
Cdd:cd02257   59 DLFGGKLESTIVCLECGHESVSTEPELFLSLPLPVKGLPQVSLED 103
peptidase_C19C cd02659
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
196-398 1.85e-13

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239124 [Multi-domain]  Cd Length: 334  Bit Score: 72.29  E-value: 1.85e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 196 GLSNLGNTCFFNAVMQNLSQTPVLRELLkevkmsgtivkieppdlaLTEPLEVNLEPPGPLTLAM-SQFLsEMQENKKRV 274
Cdd:cd02659    4 GLKNQGATCYMNSLLQQLYMTPEFRNAV------------------YSIPPTEDDDDNKSVPLALqRLFL-FLQLSESPV 64
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 275 VTPKELFSqvckkaTRFKG------YQQQDSQELLRYLLDgmraeehqrvskgilkafgnsteKLDEevknKVKDYEKKK 348
Cdd:cd02659   65 KTTELTDK------TRSFGwdslntFEQHDVQEFFRVLFD-----------------------KLEE----KLKGTGQEG 111
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 251823802 349 AIPSFvdriFGGELTSTIMCDECRTVSLVHESFLDLSLPVlddqSGKKSI 398
Cdd:cd02659  112 LIKNL----FGGKLVNYIICKECPHESEREEYFLDLQVAV----KGKKNL 153
Peptidase_C19G cd02663
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
196-388 2.26e-12

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239128 [Multi-domain]  Cd Length: 300  Bit Score: 68.49  E-value: 2.26e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 196 GLSNLGNTCFFNAVMQNLSQTPVLrELLKevkmsgtivkieppDLalteplevnleppgpltlamsqfLSEMQENKKR-- 273
Cdd:cd02663    1 GLENFGNTCYCNSVLQALYFENLL-TCLK--------------DL-----------------------FESISEQKKRtg 42
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 274 VVTPKELFSQVCKKATRFKGYQQQDSQELLRYLLDgmraeehqRVSKGILKafgnstEKLDEEVKNKVKDYEKKKAIPSF 353
Cdd:cd02663   43 VISPKKFITRLKRENELFDNYMHQDAHEFLNFLLN--------EIAEILDA------ERKAEKANRKLNNNNNAEPQPTW 108
                        170       180       190
                 ....*....|....*....|....*....|....*
gi 251823802 354 VDRIFGGELTSTIMCDECRTVSLVHESFLDLSLPV 388
Cdd:cd02663  109 VHEIFQGILTNETRCLTCETVSSRDETFLDLSIDV 143
COG5077 COG5077
Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, ...
676-812 6.31e-11

Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227409 [Multi-domain]  Cd Length: 1089  Bit Score: 66.43  E-value: 6.31e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802  676 HVYTNAKKQMLVSLAPPVLTLHLKRFQqAGF---NLRKVNKHIKFPEILDLAPFCTLKCKNvaEESTRVLYSLYGVVEHS 752
Cdd:COG5077   364 HGLQDAKKGVIFESLPPVLHLQLKRFE-YDFerdMMVKINDRYEFPLEIDLLPFLDRDADK--SENSDAVYVLYGVLVHS 440
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802  753 GTMRSGHYTAYAKertaschlsnlvlhgdipqdcemESTKGQWFHISDTHVQAVPITKVL 812
Cdd:COG5077   441 GDLHEGHYYALLK-----------------------PEKDGRWYKFDDTRVTRATEKEVL 477
COG5533 COG5533
Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones];
669-824 1.26e-10

Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 444284 [Multi-domain]  Cd Length: 284  Bit Score: 63.28  E-value: 1.26e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 669 NIKGDRRHVYTNAKKQMlvslaPPVLTLHLKRFQQAGFNlRKVNKHIKfpEILDLaPFCTLKCKNVAEEstrVLYSLYGV 748
Cdd:COG5533  163 ELEVQAKQEYEVSFVKL-----PKILTIQLKRFANLGGN-QKIDTEVD--EKFEL-PVKHDQILNIVKE---TYYDLVGF 230
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 251823802 749 VEHSGTMRSGHYTAYAKertaschlsnlvlhgdipqdcemesTKGQWFHISDTHVQAVPITKVLNS---QAYLLFYERI 824
Cdd:COG5533  231 VLHQGSLEGGHYIAYVK-------------------------KGGKWEKANDSDVTPVSEEEAINEkakNAYLYFYERI 284
Peptidase_C19H cd02664
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
196-391 3.36e-10

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239129 [Multi-domain]  Cd Length: 327  Bit Score: 62.51  E-value: 3.36e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 196 GLSNLGNTCFFNAVMQNLSQTpvlRELLKEVkmsgtivkieppdLALTEPLEVNLEPPgPLTLAMSQFLSEMQenKKRVV 275
Cdd:cd02664    1 GLINLGNTCYMNSVLQALFMA---KDFRRQV-------------LSLNLPRLGDSQSV-MKKLQLLQAHLMHT--QRRAE 61
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 276 TPKELFSQVCKKATrFKGYQQQDSQELLRYLLDgmraeehqrvskgilkafgnsteKLDeevknkvkdyekkkaipSFVD 355
Cdd:cd02664   62 APPDYFLEASRPPW-FTPGSQQDCSEYLRYLLD-----------------------RLH-----------------TLIE 100
                        170       180       190
                 ....*....|....*....|....*....|....*...
gi 251823802 356 RIFGGELTSTIMCDECRTVSLVHESF--LDLSLPVLDD 391
Cdd:cd02664  101 KMFGGKLSTTIRCLNCNSTSARTERFrdLDLSFPSVQD 138
Peptidase_C19O cd02671
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
196-395 1.83e-09

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239136 [Multi-domain]  Cd Length: 332  Bit Score: 60.29  E-value: 1.83e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 196 GLSNLGNTCFFNAVMQNLSQTPVLRELLKEvkMSGTIVKIEppdlalteplevNLEppgpltlAMSQFLSEMQENKKRVV 275
Cdd:cd02671   26 GLNNLGNTCYLNSVLQVLYFCPGFKHGLKH--LVSLISSVE------------QLQ-------SSFLLNPEKYNDELANQ 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 276 TPKELFSQVCKKATRFKGYQQQDSQELLRYLLDGMRaeehqrvskgilkafgnstekldeevknkvkdyekkkaipSFVD 355
Cdd:cd02671   85 APRRLLNALREVNPMYEGYLQHDAQEVLQCILGNIQ----------------------------------------ELVE 124
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 251823802 356 RIFGGELTSTIMCDECRTVSLVHESFLDLSLPVLDDQSGK 395
Cdd:cd02671  125 KDFQGQLVLRTRCLECETFTERREDFQDISVPVQESELSK 164
Peptidase_C19L cd02668
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
196-400 6.54e-09

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239133 [Multi-domain]  Cd Length: 324  Bit Score: 58.20  E-value: 6.54e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 196 GLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPPDLALTEPLEVNLEppgpLTLAMSQflseMQENKKRVV 275
Cdd:cd02668    1 GLKNLGATCYVNSFLQLWFMNLEFRKAVYECNSTEDAELKNMPPDKPHEPQTIIDQ----LQLIFAQ----LQFGNRSVV 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 276 TPKELFsqvckKATRFKGYQQQDSQELLRYLLDGMRAeehqrvskgilkafgnsteKLDEEVKNKVKdyekkkaipSFVD 355
Cdd:cd02668   73 DPSGFV-----KALGLDTGQQQDAQEFSKLFLSLLEA-------------------KLSKSKNPDLK---------NIVQ 119
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 251823802 356 RIFGGELTSTIMCDECRTVSLVHESFLDLSLPVLDDQSGKKSIND 400
Cdd:cd02668  120 DLFRGEYSYVTQCSKCGRESSLPSKFYELELQLKGHKTLEECIDE 164
Peptidase_C19A cd02657
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
682-822 8.89e-09

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239122 [Multi-domain]  Cd Length: 305  Bit Score: 57.73  E-value: 8.89e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 682 KKQMLVSLAPPVLTLHLKRFQ---QAGFNLrKVNKHIKFPEILDLAPFCTLKCknvaeestrvLYSLYGVVEHSG-TMRS 757
Cdd:cd02657  188 TKTSRISRLPKYLTVQFVRFFwkrDIQKKA-KILRKVKFPFELDLYELCTPSG----------YYELVAVITHQGrSADS 256
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 251823802 758 GHYTAYAKertaschlsnlvlhgdipqdcemESTKGQWFHISDTHVQAVPITKVLN-------SQAYLLFYE 822
Cdd:cd02657  257 GHYVAWVR-----------------------RKNDGKWIKFDDDKVSEVTEEDILKlsgggdwHIAYILLYK 305
Peptidase_C19R cd02674
A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
196-388 2.78e-08

A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239139 [Multi-domain]  Cd Length: 230  Bit Score: 55.37  E-value: 2.78e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 196 GLSNLGNTCFFNAVMQNLSQtpvlrellkevkmsgtivkieppdlalteplevnleppgpltlamsqflsemqenkkrvv 275
Cdd:cd02674    1 GLRNLGNTCYMNSILQCLSA------------------------------------------------------------ 20
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 276 tpkelfsqvckkatrfkgyQQQDSQELLRYLLDGMRaeehqrvskgilkafgnstekldeevknkvkdyekkkaipSFVD 355
Cdd:cd02674   21 -------------------DQQDAQEFLLFLLDGLH----------------------------------------SIIV 41
                        170       180       190
                 ....*....|....*....|....*....|...
gi 251823802 356 RIFGGELTSTIMCDECRTVSLVHESFLDLSLPV 388
Cdd:cd02674   42 DLFQGQLKSRLTCLTCGKTSTTFEPFTYLSLPI 74
ZnF_UBP smart00290
Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger;
47-113 1.13e-07

Ubiquitin Carboxyl-terminal Hydrolase-like zinc finger;


Pssm-ID: 197632  Cd Length: 50  Bit Score: 48.90  E-value: 1.13e-07
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 251823802    47 ICQDCKTDNKVkdkpeeeaedpsvWLCLKCGHQGCGRdSQEQHALKHYttpRSEPHYLVLSLDNWSV 113
Cdd:smart00290   1 RCSVCGTIENL-------------WLCLTCGQVGCGR-YQNGHALEHF---EETGHPLVVKLGTQRV 50
Peptidase_C19B cd02658
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
196-397 1.19e-07

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239123 [Multi-domain]  Cd Length: 311  Bit Score: 54.25  E-value: 1.19e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 196 GLSNLGNTCFFNAVMQNLSQTPVLRELLKEVKMSGTIVKIEPpdlalTEPLEVNLeppGPLTLAMsqfLSEmQENKKRVV 275
Cdd:cd02658    1 GLRNLGNSCYLNSVLQVLFSIPSFQWRYDDLENKFPSDVVDP-----ANDLNCQL---IKLADGL---LSG-RYSKPASL 68
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 276 TPKELFSQVCKKATRFK-----GYQ------QQDSQELLRYLLDGMRAEEHQRVSKgilkafgNSTEKLDEEVKNKVKdy 344
Cdd:cd02658   69 KSENDPYQVGIKPSMFKaligkGHPefstmrQQDALEFLLHLIDKLDRESFKNLGL-------NPNDLFKFMIEDRLE-- 139
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 251823802 345 ekkkaipsfvdrifggeltstimCDECRTVSLVHESFLDLSLPVLDDQSGKKS 397
Cdd:cd02658  140 -----------------------CLSCKKVKYTSELSEILSLPVPKDEATEKE 169
Peptidase_C19B cd02658
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
678-822 6.27e-06

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239123 [Multi-domain]  Cd Length: 311  Bit Score: 48.86  E-value: 6.27e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 678 YTNAKKQMLVSLAPPVLTLHLKRFQ-QAGFNLRKVNKHIKFPEILDLAPfctlkcknvaeestrvlYSLYGVVEHSGT-M 755
Cdd:cd02658  203 KTTATKTTGFKTFPDYLVINMKRFQlLENWVPKKLDVPIDVPEELGPGK-----------------YELIAFISHKGTsV 265
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 251823802 756 RSGHYTAYAKERTASchlsnlvlhgdipqdcemestKGQWFHISDTHVQAVPITKVLNSQAYLLFYE 822
Cdd:cd02658  266 HSGHYVAHIKKEIDG---------------------EGKWVLFNDEKVVASQDPPEMKKLGYIYFYQ 311
Peptidase_C19N cd02670
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
688-822 4.91e-05

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239135 [Multi-domain]  Cd Length: 241  Bit Score: 45.60  E-value: 4.91e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 688 SLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPF----------CTLKCKNVAEE----STRVLY--SLYGVVEH 751
Cdd:cd02670   96 AKAPSCLIICLKRYGKTEGKAQKMFKKILIPDEIDIPDFvaddpracskCQLECRVCYDDkdfsPTCGKFklSLCSAVCH 175
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 251823802 752 SGTMR-SGHYTAYAKERTaschlsnlvlhgDIPQDCEMESTKGQWF---HISDTHVQAVPI---TKVLNSQAYLLFYE 822
Cdd:cd02670  176 RGTSLeTGHYVAFVRYGS------------YSLTETDNEAYNAQWVffdDMADRDGVSNGFnipAARLLEDPYMLFYQ 241
Peptidase_C19F cd02662
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
196-227 2.16e-04

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239127 [Multi-domain]  Cd Length: 240  Bit Score: 43.51  E-value: 2.16e-04
                         10        20        30
                 ....*....|....*....|....*....|..
gi 251823802 196 GLSNLGNTCFFNAVMQNLSQTPVLRELLKEVK 227
Cdd:cd02662    1 GLVNLGNTCFMNSVLQALASLPSLIEYLEEFL 32
Peptidase_C19M cd02669
A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are ...
672-822 1.18e-03

A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl group of the C-terminal Gly residue of ubiquitin. The purpose of the de-ubiquitination is thought to be editing of the ubiquitin conjugates, which could rescue them from degradation, as well as recycling of the ubiquitin. The ubiquitin/proteasome system is responsible for most protein turnover in the mammalian cell, and with over 50 members, family C19 is one of the largest families of peptidases in the human genome.


Pssm-ID: 239134 [Multi-domain]  Cd Length: 440  Bit Score: 42.31  E-value: 1.18e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 251823802 672 GDRRHVYTNAKKQMLVSLAPPVLTLHLKRFQQAGFNLRKvNKHI-KFPEILDLAPFCTLKCKNVAEESTRvlYSLYGVVE 750
Cdd:cd02669  314 GKTETELKDSLKRYLISRLPKYLIFHIKRFSKNNFFKEK-NPTIvNFPIKNLDLSDYVHFDKPSLNLSTK--YNLVANIV 390
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 251823802 751 HSGT-MRSGHYtayakertaSCHLSNlvlhgdipqdcemESTKgQWFHISDTHVQAVPITKVLNSQAYLLFYE 822
Cdd:cd02669  391 HEGTpQEDGTW---------RVQLRH-------------KSTN-KWFEIQDLNVKEVLPQLIFLSESYIQIWE 440
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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