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Conserved domains on  [gi|115650|sp|P19228|]
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RecName: Full=Alpha-S1-casein; Short=Alpha-casein; Flags: Precursor

Protein Classification

Casein domain-containing protein( domain architecture ID 10448710)

Casein domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Casein pfam00363
Casein;
215-291 2.49e-11

Casein;


:

Pssm-ID: 425638  Cd Length: 87  Bit Score: 59.10  E-value: 2.49e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115650     215 QQASLAQKHHPRLSQSYYP-HMEQPYRMNAYsQVQMRHPMSVVDQALAQFSVQPFPQIFQYDAFP--LWAYFPQDMQYLT 291
Cdd:pfam00363   1 QLLSLEEPENLHLPLSLQQlMHQKPQDMPQT-PVFPKQPMLSVPQSKVQPYPQKVVQYYQRDMPPqaLLLYQELVMQYQK 79
 
Name Accession Description Interval E-value
Casein pfam00363
Casein;
215-291 2.49e-11

Casein;


Pssm-ID: 425638  Cd Length: 87  Bit Score: 59.10  E-value: 2.49e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115650     215 QQASLAQKHHPRLSQSYYP-HMEQPYRMNAYsQVQMRHPMSVVDQALAQFSVQPFPQIFQYDAFP--LWAYFPQDMQYLT 291
Cdd:pfam00363   1 QLLSLEEPENLHLPLSLQQlMHQKPQDMPQT-PVFPKQPMLSVPQSKVQPYPQKVVQYYQRDMPPqaLLLYQELVMQYQK 79
 
Name Accession Description Interval E-value
Casein pfam00363
Casein;
215-291 2.49e-11

Casein;


Pssm-ID: 425638  Cd Length: 87  Bit Score: 59.10  E-value: 2.49e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 115650     215 QQASLAQKHHPRLSQSYYP-HMEQPYRMNAYsQVQMRHPMSVVDQALAQFSVQPFPQIFQYDAFP--LWAYFPQDMQYLT 291
Cdd:pfam00363   1 QLLSLEEPENLHLPLSLQQlMHQKPQDMPQT-PVFPKQPMLSVPQSKVQPYPQKVVQYYQRDMPPqaLLLYQELVMQYQK 79
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.20
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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