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Conserved domains on  [gi|1406036206|gb|PZY67115|]
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invasion protein [Escherichia coli]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
InvH super family cl27989
InvH outer membrane lipoprotein; This family represents the Salmonella outer membrane ...
 20-95 1.56e-08

InvH outer membrane lipoprotein; This family represents the Salmonella outer membrane lipoprotein InvH. The molecular function of this protein is unknown, but it is required for the localization to outer membrane of InvG, which is involved in a type III secretion apparatus mediating host cell invasion.


The actual alignment was detected with superfamily member PRK15341:

Pssm-ID: 332810  Cd Length: 147  Bit Score: 48.64  E-value: 1.56e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1406036206  20 LSACTRENSLKENQNKRSG-----ESQAIVDARQFFSEHPEYISSAELEQKLYREFAQVTTVPAYKEMSMYQLLIISQDR 94
Cdd:PRK15341   64 LSNQNADNSASKNSAISSSifcekYKQTKEQALTFFQEHPQYMRSKEDEEQLMTEFKKVLLEPGSKNLSIYQTLLAAHER 143


                  .
gi 1406036206  95 L 95
Cdd:PRK15341  144 L 144
 
Name Accession Description Interval E-value
PRK15341 PRK15341
type III secretion system invasion lipoprotein InvH;
20-95 1.56e-08

type III secretion system invasion lipoprotein InvH;


Pssm-ID: 185241  Cd Length: 147  Bit Score: 48.64  E-value: 1.56e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1406036206  20 LSACTRENSLKENQNKRSG-----ESQAIVDARQFFSEHPEYISSAELEQKLYREFAQVTTVPAYKEMSMYQLLIISQDR 94
Cdd:PRK15341   64 LSNQNADNSASKNSAISSSifcekYKQTKEQALTFFQEHPQYMRSKEDEEQLMTEFKKVLLEPGSKNLSIYQTLLAAHER 143


                  .
gi 1406036206  95 L 95
Cdd:PRK15341  144 L 144
 
Name Accession Description Interval E-value
PRK15341 PRK15341
type III secretion system invasion lipoprotein InvH;
20-95 1.56e-08

type III secretion system invasion lipoprotein InvH;


Pssm-ID: 185241  Cd Length: 147  Bit Score: 48.64  E-value: 1.56e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1406036206  20 LSACTRENSLKENQNKRSG-----ESQAIVDARQFFSEHPEYISSAELEQKLYREFAQVTTVPAYKEMSMYQLLIISQDR 94
Cdd:PRK15341   64 LSNQNADNSASKNSAISSSifcekYKQTKEQALTFFQEHPQYMRSKEDEEQLMTEFKKVLLEPGSKNLSIYQTLLAAHER 143


                  .
gi 1406036206  95 L 95
Cdd:PRK15341  144 L 144
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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