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Conserved domains on  [gi|296439339|sp|Q8IZF3|]
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RecName: Full=Adhesion G protein-coupled receptor F4; AltName: Full=G-protein coupled receptor 115; AltName: Full=G-protein coupled receptor PGR18; Flags: Precursor

Protein Classification

GPS and 7tmB2_GPR111_115 domain-containing protein( domain architecture ID 12027408)

GPS and 7tmB2_GPR111_115 domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tmB2_GPR111_115 cd15994
orphan adhesion receptors GPR111 and GPR115, member of the class B2 family of ...
398-664 1.56e-170

orphan adhesion receptors GPR111 and GPR115, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR111 and GPR115 are highly homologous orphan receptors that belong to group VI adhesion-GPCRs along with GPR110, GPR113, and GPR116. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS. Both GPR111 and GPR5 are present only in land-living animals and are predominantly expressed in the developing skin.


:

Pssm-ID: 320660 [Multi-domain]  Cd Length: 267  Bit Score: 488.58  E-value: 1.56e-170
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 398 DKVLDYITCIGLSVSILSLVLCLIIEATVWSRVVVTEISYMRHVCIVNIAVSLLTANVWFIIGSHFNIKAQDYNMCVAVT 477
Cdd:cd15994    1 NAVLDYITRIGLGLSIFSLALCLTIEAVVWSHVTKTEITYMRHVCIVNIATSLLIADVWFILASIVHNTALNYPLCVAAT 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 478 FFSHFFYLSLFFWMLFKALLIIYGILVIFRRMMKSRMMVIGFAIGYGCPLIIAVTTVAITEPEKGYMRPEACWLNWDNTK 557
Cdd:cd15994   81 FFLHFFYLSLFFWMLTKALLILYGILLVFFKITKSVFIATAFSIGYGCPLVIAVLTVAITEPKKGYLRPEACWLNWDETK 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 558 ALLAFAIPAFVIVAVNLIVVLVVAVNTQRPSIGSSKSQDVVIIMRISKNVAILTPLLGLTWGFGIATLIEGTSLTFHIIF 637
Cdd:cd15994  161 ALLAFIIPALSIVVVNLIVVGVVVVKTQRSSIGESCKQDVSNIIRISKNVAILTPLLGLTWGFGLATIIDSRSLPFHIIF 240
                        250       260
                 ....*....|....*....|....*..
gi 296439339 638 ALLNAFQGFFILLFGTIMDHKIRDALR 664
Cdd:cd15994  241 ALLNAFQGFFILLFGTILDRKIRIALY 267
GPS pfam01825
GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for ...
347-390 1.65e-09

GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for auto-proteolysis, so is thus named, GPS. The GPS motif is a conserved sequence of ~40 amino acids containing canonical cysteine and tryptophan residues, and is the most highly conserved part of the domain. In most, if not all, cell-adhesion GPCRs these undergo autoproteolysis in the GPS between a conserved aliphatic residue (usually a leucine) and a threonine, serine, or cysteine residue. In higher eukaryotes this motif is found embedded in the C-terminal beta-stranded part of a GAIN domain - GPCR-Autoproteolysis INducing (GAIN). The GAIN-GPS domain adopts a fold in which the GPS motif, at the C-terminus, forms five beta-strands that are tightly integrated into the overall GAIN domain. The GPS motif, evolutionarily conserved from tetrahymena to mammals, is the only extracellular domain shared by all human cell-adhesion GPCRs and PKD proteins, and is the locus of multiple human disease mutations. The GAIN-GPS domain is both necessary and sufficient functionally for autoproteolysis, suggesting an autoproteolytic mechanism whereby the overall GAIN domain fine-tunes the chemical environment in the GPS to catalyze peptide bond hydrolysis. In the cell-adhesion GPCRs and PKD proteins, the GPS motif is always located at the end of their long N-terminal extracellular regions, immediately before the first transmembrane helix of the respective protein.


:

Pssm-ID: 460350  Cd Length: 44  Bit Score: 53.85  E-value: 1.65e-09
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 296439339  347 AQCVGW---HSKKRRWDEKACQMMLDIRNEVKCRCNYTSvvmSFSIL 390
Cdd:pfam01825   1 PQCVFWdftNSTTGRWSTEGCTTVSLNDTHTVCSCNHLT---SFAVL 44
 
Name Accession Description Interval E-value
7tmB2_GPR111_115 cd15994
orphan adhesion receptors GPR111 and GPR115, member of the class B2 family of ...
398-664 1.56e-170

orphan adhesion receptors GPR111 and GPR115, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR111 and GPR115 are highly homologous orphan receptors that belong to group VI adhesion-GPCRs along with GPR110, GPR113, and GPR116. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS. Both GPR111 and GPR5 are present only in land-living animals and are predominantly expressed in the developing skin.


Pssm-ID: 320660 [Multi-domain]  Cd Length: 267  Bit Score: 488.58  E-value: 1.56e-170
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 398 DKVLDYITCIGLSVSILSLVLCLIIEATVWSRVVVTEISYMRHVCIVNIAVSLLTANVWFIIGSHFNIKAQDYNMCVAVT 477
Cdd:cd15994    1 NAVLDYITRIGLGLSIFSLALCLTIEAVVWSHVTKTEITYMRHVCIVNIATSLLIADVWFILASIVHNTALNYPLCVAAT 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 478 FFSHFFYLSLFFWMLFKALLIIYGILVIFRRMMKSRMMVIGFAIGYGCPLIIAVTTVAITEPEKGYMRPEACWLNWDNTK 557
Cdd:cd15994   81 FFLHFFYLSLFFWMLTKALLILYGILLVFFKITKSVFIATAFSIGYGCPLVIAVLTVAITEPKKGYLRPEACWLNWDETK 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 558 ALLAFAIPAFVIVAVNLIVVLVVAVNTQRPSIGSSKSQDVVIIMRISKNVAILTPLLGLTWGFGIATLIEGTSLTFHIIF 637
Cdd:cd15994  161 ALLAFIIPALSIVVVNLIVVGVVVVKTQRSSIGESCKQDVSNIIRISKNVAILTPLLGLTWGFGLATIIDSRSLPFHIIF 240
                        250       260
                 ....*....|....*....|....*..
gi 296439339 638 ALLNAFQGFFILLFGTIMDHKIRDALR 664
Cdd:cd15994  241 ALLNAFQGFFILLFGTILDRKIRIALY 267
7tm_2 pfam00002
7 transmembrane receptor (Secretin family); This family is known as Family B, the ...
400-648 1.02e-29

7 transmembrane receptor (Secretin family); This family is known as Family B, the secretin-receptor family or family 2 of the G-protein-coupled receptors (GCPRs). They have been described in many animal species, but not in plants, fungi or prokaryotes. Three distinct sub-families are recognized. Subfamily B1 contains classical hormone receptors, such as receptors for secretin and glucagon, that are all involved in cAMP-mediated signalling pathways. Subfamily B2 contains receptors with long extracellular N-termini, such as the leukocyte cell-surface antigen CD97; calcium-independent receptors for latrotoxin, and brain-specific angiogenesis inhibitors amongst others. Subfamily B3 includes Methuselah and other Drosophila proteins. Other than the typical seven-transmembrane region, characteriztic structural features include an amino-terminal extracellular domain involved in ligand binding, and an intracellular loop (IC3) required for specific G-protein coupling.


Pssm-ID: 459625 [Multi-domain]  Cd Length: 248  Bit Score: 118.15  E-value: 1.02e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339  400 VLDYITCIGLSVSILSLVLCLIIEATVWSrvvvteISYMRHVCIVNIAVSLLTANVWFIIGSH--FNIKAQDYNM---CV 474
Cdd:pfam00002   3 SLKVIYTVGYSLSLVALLLAIAIFLLFRK------LHCTRNYIHLNLFASFILRALLFLVGDAvlFNKQDLDHCSwvgCK 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339  475 AVTFFSHFFYLSLFFWMLFKAlLIIYGILVIFRRMMKSRMMVIgFAIGYGCPLIIAVTTVAITepEKGYMRPEACWLNWD 554
Cdd:pfam00002  77 VVAVFLHYFFLANFFWMLVEG-LYLYTLLVEVFFSERKYFWWY-LLIGWGVPALVVGIWAGVD--PKGYGEDDGCWLSNE 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339  555 NTKaLLAFAIPAFVIVAVNLIV-VLVVAVNTQRPSIGSSKSQDVVIIMRISKNVAILTPLLGLTWGFGIATLIEGT--SL 631
Cdd:pfam00002 153 NGL-WWIIRGPILLIILVNFIIfINIVRILVQKLRETNMGKSDLKQYRRLAKSTLLLLPLLGITWVFGLFAFNPENtlRV 231
                         250
                  ....*....|....*..
gi 296439339  632 TFHIIFALLNAFQGFFI 648
Cdd:pfam00002 232 VFLYLFLILNSFQGFFV 248
GPS pfam01825
GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for ...
347-390 1.65e-09

GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for auto-proteolysis, so is thus named, GPS. The GPS motif is a conserved sequence of ~40 amino acids containing canonical cysteine and tryptophan residues, and is the most highly conserved part of the domain. In most, if not all, cell-adhesion GPCRs these undergo autoproteolysis in the GPS between a conserved aliphatic residue (usually a leucine) and a threonine, serine, or cysteine residue. In higher eukaryotes this motif is found embedded in the C-terminal beta-stranded part of a GAIN domain - GPCR-Autoproteolysis INducing (GAIN). The GAIN-GPS domain adopts a fold in which the GPS motif, at the C-terminus, forms five beta-strands that are tightly integrated into the overall GAIN domain. The GPS motif, evolutionarily conserved from tetrahymena to mammals, is the only extracellular domain shared by all human cell-adhesion GPCRs and PKD proteins, and is the locus of multiple human disease mutations. The GAIN-GPS domain is both necessary and sufficient functionally for autoproteolysis, suggesting an autoproteolytic mechanism whereby the overall GAIN domain fine-tunes the chemical environment in the GPS to catalyze peptide bond hydrolysis. In the cell-adhesion GPCRs and PKD proteins, the GPS motif is always located at the end of their long N-terminal extracellular regions, immediately before the first transmembrane helix of the respective protein.


Pssm-ID: 460350  Cd Length: 44  Bit Score: 53.85  E-value: 1.65e-09
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 296439339  347 AQCVGW---HSKKRRWDEKACQMMLDIRNEVKCRCNYTSvvmSFSIL 390
Cdd:pfam01825   1 PQCVFWdftNSTTGRWSTEGCTTVSLNDTHTVCSCNHLT---SFAVL 44
GPS smart00303
G-protein-coupled receptor proteolytic site domain; Present in latrophilin/CL-1, sea urchin ...
346-393 9.05e-03

G-protein-coupled receptor proteolytic site domain; Present in latrophilin/CL-1, sea urchin REJ and polycystin.


Pssm-ID: 197639  Cd Length: 49  Bit Score: 34.67  E-value: 9.05e-03
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*...
gi 296439339   346 RAQCVGWHSKKRRWDEKACQMMLDIRNEVKCRCNYTSvvmSFSILMSS 393
Cdd:smart00303   2 NPICVFWDESSGEWSTRGCELLETNGTHTTCSCNHLT---TFAVLMDV 46
 
Name Accession Description Interval E-value
7tmB2_GPR111_115 cd15994
orphan adhesion receptors GPR111 and GPR115, member of the class B2 family of ...
398-664 1.56e-170

orphan adhesion receptors GPR111 and GPR115, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR111 and GPR115 are highly homologous orphan receptors that belong to group VI adhesion-GPCRs along with GPR110, GPR113, and GPR116. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS. Both GPR111 and GPR5 are present only in land-living animals and are predominantly expressed in the developing skin.


Pssm-ID: 320660 [Multi-domain]  Cd Length: 267  Bit Score: 488.58  E-value: 1.56e-170
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 398 DKVLDYITCIGLSVSILSLVLCLIIEATVWSRVVVTEISYMRHVCIVNIAVSLLTANVWFIIGSHFNIKAQDYNMCVAVT 477
Cdd:cd15994    1 NAVLDYITRIGLGLSIFSLALCLTIEAVVWSHVTKTEITYMRHVCIVNIATSLLIADVWFILASIVHNTALNYPLCVAAT 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 478 FFSHFFYLSLFFWMLFKALLIIYGILVIFRRMMKSRMMVIGFAIGYGCPLIIAVTTVAITEPEKGYMRPEACWLNWDNTK 557
Cdd:cd15994   81 FFLHFFYLSLFFWMLTKALLILYGILLVFFKITKSVFIATAFSIGYGCPLVIAVLTVAITEPKKGYLRPEACWLNWDETK 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 558 ALLAFAIPAFVIVAVNLIVVLVVAVNTQRPSIGSSKSQDVVIIMRISKNVAILTPLLGLTWGFGIATLIEGTSLTFHIIF 637
Cdd:cd15994  161 ALLAFIIPALSIVVVNLIVVGVVVVKTQRSSIGESCKQDVSNIIRISKNVAILTPLLGLTWGFGLATIIDSRSLPFHIIF 240
                        250       260
                 ....*....|....*....|....*..
gi 296439339 638 ALLNAFQGFFILLFGTIMDHKIRDALR 664
Cdd:cd15994  241 ALLNAFQGFFILLFGTILDRKIRIALY 267
7tmB2_GPR116-like_Adhesion_VI cd15932
orphan GPR116 and related proteins, group IV adhesion GPCRs, member of the class B2 family of ...
398-664 6.40e-138

orphan GPR116 and related proteins, group IV adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; group VI adhesion GPCRs consist of orphan receptors GPR110, GPR111, GPR113, GPR115, GPR116, and closely related proteins. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. GPR110 possesses a SEA box in the N-terminal has been identified as an oncogene over-expressed in lung and prostate cancer. GPR113 contains a hormone binding domain and one EGF (epidermal grown factor) domain. GPR112 has extremely long N-terminus (about 2,400 amino acids) containing a number of Ser/Thr-rich glycosylation sites and a pentraxin (PTX) domain. GPR116 has two C2-set immunoglobulin-like repeats, which is found in the members of the immunoglobulin superfamily of cell surface proteins, and a SEA (sea urchin sperm protein, enterokinase, and a grin)-box, which is present in the extracellular domain of the transmembrane mucin (MUC) family and known to enhance O-glycosylation. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320598 [Multi-domain]  Cd Length: 268  Bit Score: 405.16  E-value: 6.40e-138
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 398 DKVLDYITCIGLSVSILSLVLCLIIEATVWSRVVVTEISYMRHVCIVNIAVSLLTANVWFIIGSHFNIKAQDYNMCVAVT 477
Cdd:cd15932    1 SPALDYITYVGLGISILSLVLCLIIEALVWKSVTKNKTSYMRHVCLVNIALSLLIADIWFIIGAAISTPPNPSPACTAAT 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 478 FFSHFFYLSLFFWMLFKALLIIYGILVIFRRMMKSRMMVIGFAIGYGCPLIIAVTTVAITEPEKGYMRPEACWLNWDNTK 557
Cdd:cd15932   81 FFIHFFYLALFFWMLTLGLLLFYRLVLVFHDMSKSTMMAIAFSLGYGCPLIIAIITVAATAPQGGYTRKGVCWLNWDKTK 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 558 ALLAFAIPAFVIVAVNLIVVLVVAVNTQRPSIG-SSKSQDVVIIMRISKNVAILTPLLGLTWGFGIATLIEGTSLTFHII 636
Cdd:cd15932  161 ALLAFVIPALAIVVVNFIILIVVIFKLLRPSVGeRPSKDEKNALVQIGKSVAILTPLLGLTWGFGLGTMIDPKSLAFHII 240
                        250       260
                 ....*....|....*....|....*...
gi 296439339 637 FALLNAFQGFFILLFGTIMDHKIRDALR 664
Cdd:cd15932  241 FAILNSFQGFFILVFGTLLDSKVREALL 268
7tmB2_GPR116_Ig-Hepta cd15254
The immunoglobulin-repeat-containing receptor Ig-hepta/GPR116, member of the class B2 family ...
401-668 1.09e-107

The immunoglobulin-repeat-containing receptor Ig-hepta/GPR116, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR116 (also known as Ig-hepta) is an orphan receptor that belongs to group VI adhesion-GPCRs along with GPR110, GPR111, GPR113, and GPR115. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. GPR116 has four I-set immunoglobulin-like repeats, which is found in the members of the immunoglobulin superfamily of cell surface proteins, and a SEA (sea urchin sperm protein, enterokinase, and a grin)-box, which is present in the extracellular domain of the transmembrane mucin (MUC) family and known to enhance O-glycosylation. GPR116 is highly expressed in fetal and adult lung, and it has been shown to regulate lung surfactant levels as well as to stimulate breast cancer metastasis through a G(q)-p63-RhoGEF-Rho GTPase signaling pathway. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320382 [Multi-domain]  Cd Length: 275  Bit Score: 327.92  E-value: 1.09e-107
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 401 LDYITCIGLSVSILSLVLCLIIEATVWSRVVVTEISYMRHVCIVNIAVSLLTANVWFIIGS--HFNIKAQDYNMCVAVTF 478
Cdd:cd15254    4 LDYITYIGLSISILSLAICIVIESLVWKSVTKNRTSYMRHVCILNIAVSLLIADIWFIVVAaiQDQNYAVNGNVCVAATF 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 479 FSHFFYLSLFFWMLFKALLIIYGILVIFRRMMKSRMMVIGFAIGYGCPLIIAVTTVAITEPEKGYMRPEACWLNWDNTKA 558
Cdd:cd15254   84 FIHFFYLCVFFWMLALGLMLFYRLVFILHDTSKTIQKAVAFCLGYGCPLIISVITIAVTLPRDSYTRKKVCWLNWEDSKA 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 559 LLAFAIPAFVIVAVNLIVVLVVAVNTQRPSIGSSKS-QDVVIIMRISKNVAILTPLLGLTWGFGIATLIEGTSLTFHIIF 637
Cdd:cd15254  164 LLAFVIPALIIVAVNSIITVVVIVKILRPSIGEKPSkQERSSLFQIIKSIGVLTPLLGLTWGFGLATVIKGSSIVFHILF 243
                        250       260       270
                 ....*....|....*....|....*....|.
gi 296439339 638 ALLNAFQGFFILLFGTIMDHKIRDALRMRMS 668
Cdd:cd15254  244 TLLNAFQGLFILVFGTLWDKKVQEALLNKYS 274
7tmB2_GPR113 cd15253
orphan adhesion receptor GPR113, member of the class B2 family of seven-transmembrane G ...
401-669 2.71e-85

orphan adhesion receptor GPR113, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR113 is an orphan receptor that belongs to group VI adhesion-GPCRs along with GPR110, GPR111, GPR115, and GPR116. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. GPR113 contains a hormone binding domain and one EGF (epidermal grown factor) domain, and is primarily expressed in a subset of taste receptor cells. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320381 [Multi-domain]  Cd Length: 271  Bit Score: 269.71  E-value: 2.71e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 401 LDYITCIGLSVSILSLVLCLIIEATVWSRVVVTEISYMRHVCIVNIAVSLLTANVWFIIGSHFNIKAQDYnMCVAVTFFS 480
Cdd:cd15253    4 LDFLSQVGLGASILALLLCLGIYRLVWRSVVRNKISYFRHMTLVNIAFSLLLADTCFLGATFLSAGHESP-LCLAAAFLC 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 481 HFFYLSLFFWMLFKALLIIYGILVIFRRMMKSRMMVIGFAIGYGCPLIIAVTTVAITEPEKGYMRPEACWLNWDNtKALL 560
Cdd:cd15253   83 HFFYLATFFWMLVQALMLFHQLLFVFHQLAKRSVLPLMVTLGYLCPLLIAAATVAYYYPKRQYLHEGACWLNGES-GAIY 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 561 AFAIPAFVIVAVNLIVVLVVAVNTQRPSIGSS-KSQDVVIIMRISKNVAILTPLLGLTWGFGIATLIEGTSLTFHIIFAL 639
Cdd:cd15253  162 AFSIPVLAIVLVNLLVLFVVLMKLMRPSVSEGpPPEERKALLSIFKALLVLTPVFGLTWGLGVATLTGESSQVSHYGFAI 241
                        250       260       270
                 ....*....|....*....|....*....|
gi 296439339 640 LNAFQGFFILLFGTIMDHKIRDALRMRMSS 669
Cdd:cd15253  242 LNAFQGVFILLFGCLMDKKVREALLKRLCK 271
7tmB2_Adhesion cd15040
adhesion receptors, subfamily B2 of the class B family of seven-transmembrane G ...
398-662 1.72e-52

adhesion receptors, subfamily B2 of the class B family of seven-transmembrane G protein-coupled receptors; The B2 subfamily of class B GPCRs consists of cell-adhesion receptors with 33 members in humans and vertebrates. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing a variety of structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, linked to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320168 [Multi-domain]  Cd Length: 253  Bit Score: 182.00  E-value: 1.72e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 398 DKVLDYITCIGLSVSILSLVLCLIIEATVWSRvvvteISYMRHVCIVNIAVSLLTANVWFIIGShfnIKAQDYNMCVAVT 477
Cdd:cd15040    1 EKALSIITYIGCGLSLLGLLLTIITYILFRKL-----RKRKPTKILLNLCLALLLANLLFLFGI---NSTDNPVLCTAVA 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 478 FFSHFFYLSLFFWMLFKALLIIYGILVIFRRMMkSRMMVIGFAIGYGCPLIIAVTTVAITePEKGYMRPEACWLNWDNTk 557
Cdd:cd15040   73 ALLHYFLLASFMWMLVEALLLYLRLVKVFGTYP-RHFILKYALIGWGLPLIIVIITLAVD-PDSYGNSSGYCWLSNGNG- 149
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 558 ALLAFAIPAFVIVAVNLIVVLVVAVNTQRPSIGSSKSQDVVIIMRIsKNVAILTPLLGLTWGFGIATLIeGTSLTFHIIF 637
Cdd:cd15040  150 LYYAFLGPVLLIILVNLVIFVLVLRKLLRLSAKRNKKKRKKTKAQL-RAAVSLFFLLGLTWIFGILAIF-GARVVFQYLF 227
                        250       260
                 ....*....|....*....|....*
gi 296439339 638 ALLNAFQGFFILLFGTIMDHKIRDA 662
Cdd:cd15040  228 AIFNSLQGFFIFIFHCLRNKEVRKA 252
7tm_classB cd13952
class B family of seven-transmembrane G protein-coupled receptors; The class B of ...
398-663 8.49e-43

class B family of seven-transmembrane G protein-coupled receptors; The class B of seven-transmembrane GPCRs is classified into three major subfamilies: subfamily B1 (secretin-like receptor family), B2 (adhesion family), and B3 (Methuselah-like family). The class B receptors have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi or prokaryotes. The B1 subfamily comprises receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the subfamily B1 receptors preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. The subfamily B2 consists of cell-adhesion receptors with 33 members in humans and vertebrates. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing a variety of structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, linked to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. Furthermore, the subfamily B3 includes Methuselah (Mth) protein, which was originally identified in Drosophila as a GPCR affecting stress resistance and aging, and its closely related proteins.


Pssm-ID: 410627 [Multi-domain]  Cd Length: 260  Bit Score: 155.45  E-value: 8.49e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 398 DKVLDYITCIGLSVSILSLVLCLIIEATVWSrvvvteISYMRHVCIVNIAVSLLTANVWFIIGSHFNIKaQDYNMCVAVT 477
Cdd:cd13952    1 DLALSIITYIGCSLSLVGLLLTIITYLLFPK------LRNLRGKILINLCLSLLLAQLLFLIGQLLTSS-DRPVLCKALA 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 478 FFSHFFYLSLFFWMLFKALLIIYGILVIFRRMMKSRMMVIgFAIGYGCPLIIAVTTVAI---TEPEKGYMRPEACWLNWD 554
Cdd:cd13952   74 ILLHYFLLASFFWMLVEAFDLYRTFVKVFGSSERRRFLKY-SLYGWGLPLLIVIITAIVdfsLYGPSPGYGGEYCWLSNG 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 555 NTkALLAFAIPAFVIVAVNLIVVLVVAVNTQRPSIGSSKSQDVVIIMRISKNVAILTPLLGLTWGFGIATLIEGTSLTFH 634
Cdd:cd13952  153 NA-LLWAFYGPVLLILLVNLVFFILTVRILLRKLRETPKQSERKSDRKQLRAYLKLFPLMGLTWIFGILAPFVGGSLVFW 231
                        250       260
                 ....*....|....*....|....*....
gi 296439339 635 IIFALLNAFQGFFILLFGTIMDHKIRDAL 663
Cdd:cd13952  232 YLFDILNSLQGFFIFLIFCLKNKEVRRLL 260
7tmB2_GPR133-like_Adhesion_V cd15933
orphan GPR133 and related proteins, group V adhesion GPCRs, member of class B2 family of ...
399-663 3.44e-41

orphan GPR133 and related proteins, group V adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; group V adhesion GPCRs include orphan receptors GPR133, GPR144, and closely related proteins. The function of GPR144 has not yet been characterized, whereas GPR133 is highly expressed in the pituitary gland and is coupled to the G(s) protein, leading to activation of adenylate cyclase pathway. Moreover, genetic variations in the GPR133 have been reported to be associated with adult height and heart rate. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320599 [Multi-domain]  Cd Length: 252  Bit Score: 150.56  E-value: 3.44e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 399 KVLDYITCIGLSVSILSLVLCLIIEATVwsRVVVTEiSYMRHVcivNIAVSLLTANVWFIIGSHFNIKAqdyNMCVAVTF 478
Cdd:cd15933    2 RALSIISYIGCGISIACLALTLIIFLVL--RVLSSD-RFQIHK---NLCVALLLAQILLLAGEWAEGNK---VACKVVAI 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 479 FSHFFYLSLFFWMLFKALLIIYGILVIFRRmmKSRMMvIGFAIGYGCPLIIAVTTVAITEpeKGYMRPEACWLNWDNtKA 558
Cdd:cd15933   73 LLHFFFMAAFSWMLVEGLHLYLMIVKVFNY--KSKMR-YYYFIGWGLPAIIVAISLAILF--DDYGSPNVCWLSLDD-GL 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 559 LLAFAIPAFVIVAVNLIV-VLVVAVNTQRPSIGSSKSQ-DVVIIMRISKNVAILTPLLGLTWGFGIATLIEGTsLTFHII 636
Cdd:cd15933  147 IWAFVGPVIFIITVNTVIlILVVKITVSLSTNDAKKSQgTLAQIKSTAKASVVLLPILGLTWLFGVLVVNSQT-IVFQYI 225
                        250       260
                 ....*....|....*....|....*..
gi 296439339 637 FALLNAFQGFFILLFGTIMDHKIRDAL 663
Cdd:cd15933  226 FVILNSLQGLMIFLFHCVLNSEVRSAF 252
7tmB2_latrophilin-like_invertebrate cd15440
invertebrate latrophilin-like receptors, member of the class B2 family of seven-transmembrane ...
399-665 7.52e-32

invertebrate latrophilin-like receptors, member of the class B2 family of seven-transmembrane G protein-coupled receptors; This subgroup includes latrophilin-like proteins that are found in invertebrates such as insects and worms. Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of vertebrate latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320556 [Multi-domain]  Cd Length: 259  Bit Score: 124.68  E-value: 7.52e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 399 KVLDYITCIGLSVSILSLVLCLIIeATVWSRVVVTEISYMRHVCIvniavSLLTANVWFIIGshfnIKAQ-DYNMCVAVT 477
Cdd:cd15440    2 SALTFITYIGCIISIVCLLLAFIT-FTCFRNLQCDRNTIHKNLCL-----CLLIAEIVFLLG----IDQTeNRTLCGVIA 71
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 478 FFSHFFYLSLFFWMLFKALLIIYGILVIFRRMmKSRMMVIgFAIGYGCPLIIAVTTVAITEpeKGYMRPEACWLNWDNTk 557
Cdd:cd15440   72 GLLHYFFLAAFSWMLLEGFQLYVMLVEVFEPE-KSRIKWY-YLFGYGLPALIVAVSAGVDP--TGYGTEDHCWLSTENG- 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 558 ALLAFAIPAFVIVAVNLiVVLVVAVNTQ-RPSIGSSKSQDVVIIMRIS---KNVAILTPLLGLTWGFGIATLIEGtSLTF 633
Cdd:cd15440  147 FIWSFVGPVIVVLLANL-VFLGMAIYVMcRHSSRSASKKDASKLKNIRgwlKGSIVLVVLLGLTWTFGLLFINQE-SIVM 224
                        250       260       270
                 ....*....|....*....|....*....|..
gi 296439339 634 HIIFALLNAFQGFFILLFGTIMDHKIRDALRM 665
Cdd:cd15440  225 AYIFTILNSLQGLFIFIFHCVLNEKVRKELRR 256
7tm_2 pfam00002
7 transmembrane receptor (Secretin family); This family is known as Family B, the ...
400-648 1.02e-29

7 transmembrane receptor (Secretin family); This family is known as Family B, the secretin-receptor family or family 2 of the G-protein-coupled receptors (GCPRs). They have been described in many animal species, but not in plants, fungi or prokaryotes. Three distinct sub-families are recognized. Subfamily B1 contains classical hormone receptors, such as receptors for secretin and glucagon, that are all involved in cAMP-mediated signalling pathways. Subfamily B2 contains receptors with long extracellular N-termini, such as the leukocyte cell-surface antigen CD97; calcium-independent receptors for latrotoxin, and brain-specific angiogenesis inhibitors amongst others. Subfamily B3 includes Methuselah and other Drosophila proteins. Other than the typical seven-transmembrane region, characteriztic structural features include an amino-terminal extracellular domain involved in ligand binding, and an intracellular loop (IC3) required for specific G-protein coupling.


Pssm-ID: 459625 [Multi-domain]  Cd Length: 248  Bit Score: 118.15  E-value: 1.02e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339  400 VLDYITCIGLSVSILSLVLCLIIEATVWSrvvvteISYMRHVCIVNIAVSLLTANVWFIIGSH--FNIKAQDYNM---CV 474
Cdd:pfam00002   3 SLKVIYTVGYSLSLVALLLAIAIFLLFRK------LHCTRNYIHLNLFASFILRALLFLVGDAvlFNKQDLDHCSwvgCK 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339  475 AVTFFSHFFYLSLFFWMLFKAlLIIYGILVIFRRMMKSRMMVIgFAIGYGCPLIIAVTTVAITepEKGYMRPEACWLNWD 554
Cdd:pfam00002  77 VVAVFLHYFFLANFFWMLVEG-LYLYTLLVEVFFSERKYFWWY-LLIGWGVPALVVGIWAGVD--PKGYGEDDGCWLSNE 152
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339  555 NTKaLLAFAIPAFVIVAVNLIV-VLVVAVNTQRPSIGSSKSQDVVIIMRISKNVAILTPLLGLTWGFGIATLIEGT--SL 631
Cdd:pfam00002 153 NGL-WWIIRGPILLIILVNFIIfINIVRILVQKLRETNMGKSDLKQYRRLAKSTLLLLPLLGITWVFGLFAFNPENtlRV 231
                         250
                  ....*....|....*..
gi 296439339  632 TFHIIFALLNAFQGFFI 648
Cdd:pfam00002 232 VFLYLFLILNSFQGFFV 248
7tmB2_GPR133 cd15256
orphan adhesion receptor GPR133, member of the class B2 family of seven-transmembrane G ...
401-666 2.35e-29

orphan adhesion receptor GPR133, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR133 is an orphan receptor that belongs to the group V adhesion-GPCRs together with GPR144. The function of GPR144 has not yet been characterized, whereas GPR133 is highly expressed in the pituitary gland and is coupled to the Gs protein, leading to activation of adenylyl cyclase pathway. Moreover, genetic variations in the GPR133 have been reported to be associated with adult height and heart rate. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320384 [Multi-domain]  Cd Length: 260  Bit Score: 117.33  E-value: 2.35e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 401 LDYITCIGLSVSILSLVLCLIIEATVWSrvvVTEISYMRHVCIVNIAVSLLTANVWFIIGSHFNIKAQDynmCVAVTFFS 480
Cdd:cd15256    4 LSSITYVGCSLSIFCLAITLVTFAVLSS---VSTIRNQRYHIHANLSFAVLVAQILLLISFRFEPGTLP---CKIMAILL 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 481 HFFYLSLFFWMLFKALLIIYGILVIFRRMMKSRMMVIGfaIGYGCPLIIAVttVAITEPEKGYMRPEACWLNWDNtKALL 560
Cdd:cd15256   78 HFFFLSAFAWMLVEGLHLYSMVIKVFGSEESKHFYYYG--IGWGSPLLICI--ISLTSALDSYGESDNCWLSLEN-GAIW 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 561 AFAIPAFVIVAVNLIVVLVVAVNTQRPSIGSSKSQ-DVVIIMRISKNVAILTPLLGLTWGFGIATlIEGTSLTFHIIFAL 639
Cdd:cd15256  153 AFVAPALFVIVVNIGILIAVTRVISRISADNYKVHgDANAFKLTAKAVAVLLPILGSSWVFGVLA-VNTHALVFQYMFAI 231
                        250       260
                 ....*....|....*....|....*..
gi 296439339 640 LNAFQGFFILLFGTIMDHKIRDALRMR 666
Cdd:cd15256  232 FNSLQGFFIFLFHCLLNSEVRAAFKHK 258
7tmB2_CELSR_Adhesion_IV cd15441
cadherin EGF LAG seven-pass G-type receptors, group IV adhesion GPCRs, member of the class B2 ...
401-664 7.16e-27

cadherin EGF LAG seven-pass G-type receptors, group IV adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. Celsr3 is expressed in both the developing and adult mouse brain. It has been functionally implicated in proper neuron migration and axon guidance in the CNS.


Pssm-ID: 320557 [Multi-domain]  Cd Length: 254  Bit Score: 110.03  E-value: 7.16e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 401 LDYITCIGLSVSILSLVLCLIIeatvwsrvvvteISYMRHV------CIVNIAVSLLTANVWFIIGSHfniKAQDYNMCV 474
Cdd:cd15441    4 LKIVTYIGIGISLVLLVIAFLV------------LSCLRGLqsnsnsIHKNLVACLLLAELLFLLGIN---QTENLFPCK 68
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 475 AVTFFSHFFYLSLFFWMLFKALLIiYGILVIFRRMMKSRMMVIgFAIGYGCPLIIAVTTVAItEPEkGYMRPEACWLNWD 554
Cdd:cd15441   69 LIAILLHYFYLSAFSWLLVESLHL-YRMLTEPRDINHGHMRFY-YLLGYGIPAIIVGLSVGL-RPD-GYGNPDFCWLSVN 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 555 NTkALLAFAIPAFVIVAVNLIVVLVVAVNTQRPSIGSSKSQDVVIIMRISknvAILTPLLGLTWGFGIATLIEGTSLtFH 634
Cdd:cd15441  145 ET-LIWSFAGPIAFVIVITLIIFILALRASCTLKRHVLEKASVRTDLRSS---FLLLPLLGATWVFGLLAVNEDSEL-LH 219
                        250       260       270
                 ....*....|....*....|....*....|
gi 296439339 635 IIFALLNAFQGFFILLFGTIMDHKIRDALR 664
Cdd:cd15441  220 YLFAGLNFLQGLFIFLFYCIFNKKVRRELK 249
7tmB2_BAI_Adhesion_VII cd15251
brain-specific angiogenesis inhibitors, group VII adhesion GPCRs, member of the class B2 ...
407-667 7.36e-26

brain-specific angiogenesis inhibitors, group VII adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediate direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320379  Cd Length: 253  Bit Score: 106.95  E-value: 7.36e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 407 IGLSVSILSLVLCLIIEATVWsRVVVTEisymRHVCIVNIAVSLLTANVWFIIGshfNIKAQDYNMCVAVTFFSHFFYLS 486
Cdd:cd15251   10 VGCGVSCLALLTLLAIYAAFW-RYIRSE----RSIILINFCLSIISSNILILVG---QTQTLNKGVCTMTAAFLHFFFLS 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 487 LFFWMLFKALLIIYGILVIFR-RMMKSRMMvigfAIGYGCPLIIAVTTVAITEpEKGYMRPEACWLNWDNtKALLAFAIP 565
Cdd:cd15251   82 SFCWVLTEAWQSYMAVTGRMRtRLIRKRFL----CLGWGLPALVVAVSVGFTR-TKGYGTSSYCWLSLEG-GLLYAFVGP 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 566 AFVIVAVNLIV-VLVVAVNTQRPSIGSSKsqdvviiMRISKNVAILTPLLGLTWGFGIATLIEGTSLTFHIIFALLNAFQ 644
Cdd:cd15251  156 AAAVVLVNMVIgILVFNKLVSRDGISDNA-------MASLWSSCVVLPLLALTWMSAVLAMTDRRSVLFQILFAVFDSLQ 228
                        250       260
                 ....*....|....*....|...
gi 296439339 645 GFFILLFGTIMDHKIRDALRMRM 667
Cdd:cd15251  229 GFVIVMVHCILRREVQDAVKCRM 251
7tmB2_BAI2 cd15988
brain-specific angiogenesis inhibitor 2, a group VII adhesion GPCR, member of the class B2 ...
407-667 1.79e-23

brain-specific angiogenesis inhibitor 2, a group VII adhesion GPCR, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediates direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320654 [Multi-domain]  Cd Length: 291  Bit Score: 101.18  E-value: 1.79e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 407 IGLSVSILSLVLCLIIEATVWsRVVVTEisymRHVCIVNIAVSLLTANVWFIIGSHfniKAQDYNMCVAVTFFSHFFYLS 486
Cdd:cd15988   10 IGCAVSCMALLILLAIYAAFW-RFIRSE----RSIILLNFCLSILASNILILVGQS---QTLSKGVCTMTAAFLHFFFLS 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 487 LFFWMLFKALLIIYGILVIFR-RMMKSRMMvigfAIGYGCPLIIAVTTVAITEpEKGYMRPEACWLNWDNtKALLAFAIP 565
Cdd:cd15988   82 SFCWVLTEAWQSYLAVIGRMRtRLVRKRFL----CLGWGLPALVVAVSVGFTR-TKGYGTASYCWLSLEG-GLLYAFVGP 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 566 AFVIVAVNLIVVLVV----------AVNTQRPSIGSSKSQDVVIIMRISK----------------------NVAILTPL 613
Cdd:cd15988  156 AAVIVLVNMLIGIIVfnklmsrdgiSDKSKKQRAGSEAEPCSSLLLKCSKcgvvssaamssatassamaslwSSCVVLPL 235
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 296439339 614 LGLTWGFGIATLIEGTSLTFHIIFALLNAFQGFFILLFGTIMDHKIRDALRMRM 667
Cdd:cd15988  236 LALTWMSAVLAMTDRRSILFQVLFAVFNSVQGFVIITVHCFLRREVQDVVKCQM 289
7tmB2_CD97 cd15438
CD97 antigen, member of the class B2 family of seven-transmembrane G protein-coupled receptors; ...
401-661 1.47e-22

CD97 antigen, member of the class B2 family of seven-transmembrane G protein-coupled receptors; group II adhesion GPCRs, including the leukocyte cell-surface antigen CD97 and the epidermal growth factor (EGF)-module-containing, mucin-like hormone receptor (EMR1-4), are primarily expressed in cells of the immune system. All EGF-TM7 receptors, which belong to the B2 subfamily B2 of adhesion GPCRs, are members of group II, except for ETL (EGF-TM7-latrophilin related protein), which is classified into group I. Members of the EGF-TM7 receptors are characterized by the presence of varying numbers of N-terminal EGF-like domains, which play critical roles in ligand recognition and cell adhesion, linked by a stalk region to a class B seven-transmembrane domain. In the case of CD97, alternative splicing results in three isoforms possessing either three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. For example, CD97, which is involved in angiogenesis and the migration and invasion of tumor cells, has been shown to promote cell aggregation in a GPS proteolysis-dependent manner. CD97 is widely expressed on lymphocytes, monocytes, macrophages, dendritic cells, granulocytes and smooth muscle cells as well as in a variety of human tumors including colorectal, gastric, esophageal pancreatic, and thyroid carcinoma. EMR2 shares strong sequence homology with CD97, differing by only six amino acids. However, unlike CD97, EMR2 is not found in those of CD97-positive tumor cells and is not expressed on lymphocytes but instead on monocytes, macrophages and granulocytes. CD97 has three known ligands: CD55, decay-accelerating factor for regulation of complement system; chondroitin sulfate, a glycosaminoglycan found in the extracellular matrix; and the integrin alpha5beta1, which play a role in angiogenesis. Although EMR2 does not effectively interact with CD55, the fourth EGF-like domain of this receptor binds to chondroitin sulfate to mediate cell attachment.


Pssm-ID: 320554 [Multi-domain]  Cd Length: 261  Bit Score: 97.91  E-value: 1.47e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 401 LDYITCIGLSVSILSLVLCLIieatvwSRVVVTEISYMRHVCIVNIAVSLLTANVWFIIG--SHFNIKAqdynmCVAVTF 478
Cdd:cd15438    4 LTLITKVGLSVSLFCLFLCIL------TFLFCRSIRGTRNTIHLHLCLSLFLAHLIFLLGinNTNNQVA-----CAVVAG 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 479 FSHFFYLSLFFWMLFKALLIIYGILVIFR-RMMKSRMMvigFAIGYGCPLIIAVTTVAITepEKGYMRPEACWLNWDNTk 557
Cdd:cd15438   73 LLHYFFLAAFCWMSLEGVELYLMVVQVFNtQSLKKRYL---LLIGYGVPLVIVAISAAVN--SKGYGTQRHCWLSLERG- 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 558 ALLAFAIPAFVIVAVNLIV-VLVVAVNTQR-----PSIGSSKSQDVVIIMRISKnvailTPLLGLTWGFGIATLIEGTsL 631
Cdd:cd15438  147 FLWSFLGPVCLIILVNAIIfVITVWKLAEKfssinPDMEKLRKIRALTITAIAQ-----LCILGCTWIFGFFQFSDST-L 220
                        250       260       270
                 ....*....|....*....|....*....|
gi 296439339 632 TFHIIFALLNAFQGFFILLFGTIMDHKIRD 661
Cdd:cd15438  221 VMSYLFTILNSLQGLFIFLLHCLLSKQVRE 250
7tmB2_Latrophilin_Adhesion_I cd15252
Latrophilins and similar receptors, group I adhesion GPCRs, member of class B2 family of ...
398-664 1.82e-22

Latrophilins and similar receptors, group I adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; Group I adhesion GPCRs consist of latrophilins (also called lectomedins or latrotoxin receptors) and ETL (EGF-TM7-latrophilin-related protein. These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320380 [Multi-domain]  Cd Length: 257  Bit Score: 97.19  E-value: 1.82e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 398 DKVLDYITCIGLSVSILSLVLCLIieaTVWsrvVVTEISYMRHVCIVNIAVSLLTANVWFIIGSHFNikaQDYNMCVAVT 477
Cdd:cd15252    1 YNILTRITQVGIIISLVCLAICIF---TFW---FFRGLQSDRTTIHKNLCISLFLAELVFLIGINTT---TNKIFCSVIA 71
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 478 FFSHFFYLSLFFWMLFKALLIiYGILVIFRRMMKSRMMVIGFaIGYGCPLIIAVTTVAITEpeKGYMRPEACWLNWDNTk 557
Cdd:cd15252   72 GLLHYFFLAAFAWMFIEGIQL-YLMLVEVFENEGSRHKNFYI-FGYGSPAVIVGVSAALGY--RYYGTTKVCWLSTENY- 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 558 ALLAFAIPAFVIVAVNLIVVLVVAVNTQRPSIGS-SKSQDVVIIMRISKNVAILTPLLGLTWGFGIATLIEGTSLTFHIi 636
Cdd:cd15252  147 FIWSFIGPATLIILLNLIFLGVAIYKMFRHTAGLkPEVSCLENIRSWARGAIALLFLLGLTWIFGVLHINHASVVMAYL- 225
                        250       260
                 ....*....|....*....|....*...
gi 296439339 637 FALLNAFQGFFILLFGTIMDHKIRDALR 664
Cdd:cd15252  226 FTVSNSLQGMFIFLFHCVLSRKVRKEYY 253
7tmB3_Methuselah-like cd15039
Methuselah-like subfamily B3, member of the class B family of seven-transmembrane G ...
398-650 2.49e-21

Methuselah-like subfamily B3, member of the class B family of seven-transmembrane G protein-coupled receptors; The subfamily B3 of class B GPCRs consists of Methuselah (Mth) and its closely related proteins found in bilateria. Mth was originally identified in Drosophila as a GPCR affecting stress resistance and aging. In addition to the seven transmembrane helices, Mth contains an N-terminal extracellular domain involved in ligand binding, and a third intracellular loop (IC3) required for the specificity of G-protein coupling. Drosophila Mth mutants showed an increase in average lifespan by 35% and greater resistance to a variety of stress factors, including starvation, high temperature, and paraquat-induced oxidative toxicity. Moreover, mutations in two endogenous peptide ligands of Methuselah, Stunted A and B, showed an increased in lifespan and resistance to oxidative stress induced by dietary paraquat. These results strongly suggest that the Stunted-Methuselah system plays important roles in stress response and aging.


Pssm-ID: 410632 [Multi-domain]  Cd Length: 270  Bit Score: 94.21  E-value: 2.49e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 398 DKVLDYITCIGLSVSILSLVLCLIIEATvwsrvvvteISYMRHV---CIVNIAVSLLTANVWFIIGSHFNIkaQDYNMCV 474
Cdd:cd15039    1 SSILGILTLIGLIISLVFLLLTLAVYAL---------LPELRNLhgkCLMCLVLSLFVAYLLLLIGQLLSS--GDSTLCV 69
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 475 AVTFFSHFFYLSLFFWM------LFKALliIYGILVIFRRMMKSRMMVIGfAIGYGCPLIIAVTTVAITE-PEKGYMRP- 546
Cdd:cd15039   70 ALGILLHFFFLAAFFWLnvmsfdIWRTF--RGKRSSSSRSKERKRFLRYS-LYAWGVPLLLVAVTIIVDFsPNTDSLRPg 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 547 ---EACWLNwDNTKALLAFAIPAFVIVAVNLIVVLVVAVntqrpSIGSSKSQDVVIIMRISKNVAI------LTPLLGLT 617
Cdd:cd15039  147 ygeGSCWIS-NPWALLLYFYGPVALLLLFNIILFILTAI-----RIRKVKKETAKVQSRLRSDKQRfrlylkLFVIMGVT 220
                        250       260       270
                 ....*....|....*....|....*....|...
gi 296439339 618 WGFGIATLIEGTSLTFHIIFALLNAFQGFFILL 650
Cdd:cd15039  221 WILEIISWFVGGSSVLWYIFDILNGLQGVFIFL 253
7tmB2_GPR144 cd15255
orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G ...
473-664 3.06e-21

orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR144 is an orphan receptor that belongs to the group V adhesion-GPCRs together with GPR133. The function of GPR144 has not yet been characterized, whereas GPR133 is highly expressed in the pituitary gland and is coupled to the Gs protein, leading to activation of adenylyl cyclase pathway. Moreover, genetic variations in the GPR133 have been reported to be associated with adult height and heart rate. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320383 [Multi-domain]  Cd Length: 263  Bit Score: 93.76  E-value: 3.06e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 473 CVAVTFFSHFFYLSLFFWMLFKALLIIYGILVIfrRMMKSRMMVIGFAIGYGCPLIIAVTTVAiTEPEKgYMRPEACWLN 552
Cdd:cd15255   67 CWAVTALLHLFFLAAFSWMLVEGLLLWSKVVAV--NMSEDRRMKFYYVTGWGLPVVIVAVTLA-TSFNK-YVADQHCWLN 142
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 553 WdNTKALLAFAIPAFVIVAVNLIV---VLVVAVNTQR-------PSIGSSKsQDVVIIMRISKNVAILTPLLGLTWGFGI 622
Cdd:cd15255  143 V-QTDIIWAFVGPVLFVLTVNTFVlfrVVMVTVSSARrrakmltPSSDLEK-QIGIQIWATAKPVLVLLPVLGLTWLCGV 220
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 296439339 623 ATLIegtSLTFHIIFALLNAFQGFFILLFGTIMDHKIRDALR 664
Cdd:cd15255  221 LVHL---SDVWAYVFITLNSFQGLYIFLVYAIYNSEVRNAIQ 259
7tmB2_GPR112 cd15997
Probable G protein-coupled receptor 112, member of the class B2 family of seven-transmembrane ...
443-665 1.16e-20

Probable G protein-coupled receptor 112, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR112 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include orphan GPCRs such as GPR56, GPR64, GPR97, GPR114, and GPR126. GPR112 is specifically expressed in normal enterochromatin cells and gastrointestinal neuroendocrine carcinoma cells, but its biological function is unknown. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320663  Cd Length: 269  Bit Score: 92.42  E-value: 1.16e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 443 IVNIAVSLLTANVWFIIGSHFNiKAQDYNMCVAVTFFSHFFYLSLFFWMLFKALLIIYGILVIFRRMMKSRMMVIGfAIG 522
Cdd:cd15997   41 LINLCTALLMLNLVFLLNSWLS-SFNNYGLCITVAAFLHYFLLASFTWMGLEAVHMYFALVKVFNIYIPNYILKFC-IAG 118
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 523 YGCPLIIAVTTVAI------TEPEKGYMRPEA--CWL--NWDNTKALLAFAIPAFVIVAVNLIVVLV----VAVNTQRPS 588
Cdd:cd15997  119 WGIPAVVVALVLAInkdfygNELSSDSLHPSTpfCWIqdDVVFYISVVAYFCLIFLCNISMFITVLIqirsMKAKKPSRN 198
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 296439339 589 IGSSKSQDVviimrisKNVAILTPLLGLTWGFGIATLieGTSLTFHI-IFALLNAFQGFFILLFGTIMDHKIRDALRM 665
Cdd:cd15997  199 WKQGFLHDL-------KSVASLTFLLGLTWGFAFFAW--GPVRIFFLyLFSICNTLQGFFIFVFHCLMKENVRKQWRI 267
7tmB2_BAI3 cd15989
brain-specific angiogenesis inhibitor 3, a group VII adhesion GPCR, member of the class B2 ...
407-667 2.83e-20

brain-specific angiogenesis inhibitor 3, a group VII adhesion GPCR, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediates direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320655 [Multi-domain]  Cd Length: 293  Bit Score: 91.67  E-value: 2.83e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 407 IGLSVSILSLVLCLIIEATVWsRVVVTEisymRHVCIVNIAVSLLTANVWFIIGshfNIKAQDYNMCVAVTFFSHFFYLS 486
Cdd:cd15989   12 VGCGLSCLALITLAVVYAALW-RYIRSE----RSIILINFCLSIISSNILILVG---QTQTHNKGICTMTTAFLHFFFLA 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 487 LFFWMLFKALLIIYGILVIFR-RMMKSRMMvigfAIGYGCPLIIAVTTVAITEpEKGYMRPEACWLNWDNtKALLAFAIP 565
Cdd:cd15989   84 SFCWVLTEAWQSYMAVTGKIRtRLIRKRFL----CLGWGLPALVVAISMGFTK-AKGYGTPHYCWLSLEG-GLLYAFVGP 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 566 AFVIVAVNLIV-VLVVAVNTQRPSIGSSKSQD--------------------VVIIMRISKNVA-----------ILTPL 613
Cdd:cd15989  158 AAAVVLVNMVIgILVFNKLVSRDGILDKKLKHragqmsephsgltlkcakcgVVSTTALSATTAsnamaslwsscVVLPL 237
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 296439339 614 LGLTWGFGIATLIEGTSLTFHIIFALLNAFQGFFILLFGTIMDHKIRDALRMRM 667
Cdd:cd15989  238 LALTWMSAVLAMTDKRSILFQILFAVFDSLQGFVIVMVHCILRREVQDAFRCRL 291
7tmB2_BAI1 cd15990
brain-specific angiogenesis inhibitor 1, a group VII adhesion GPCR, member of the class B2 ...
407-667 5.84e-20

brain-specific angiogenesis inhibitor 1, a group VII adhesion GPCR, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediates direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320656  Cd Length: 267  Bit Score: 90.43  E-value: 5.84e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 407 IGLSVSILSLVLCLIIEATVWsRVVVTEisymRHVCIVNIAVSLLTANVWFIIGshfNIKAQDYNMCVAVTFFSHFFYLS 486
Cdd:cd15990   13 VGCGVSSLTLLLLIIIYVSVW-RYIRSE----RSVILINFCLSIISSNALILIG---QTQTRNKVVCTLVAAFLHFFFLS 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 487 LFFWMLFKALLIIYGILVIFR-RMMKSRMMvigfAIGYGCPLIIAVTTVAITEPeKGYMRPEACWLNWDNtKALLAFAIP 565
Cdd:cd15990   85 SFCWVLTEAWQSYMAVTGRLRnRIIRKRFL----CLGWGLPALVVAISVGFTKA-KGYGTVNYCWLSLEG-GLLYAFVGP 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 566 AFVIVAVNLIV-VLVVAVNTQRPSIGSSKSQDVVIIMRISKNVAIltPLLGLTWGFGIATLIEGTSLTFHIIFALLNAFQ 644
Cdd:cd15990  159 AAAVVLVNMVIgILVFNKLVSKDGITDKKLKERAGASLWSSCVVL--PLLALTWMSAVLAITDRRSALFQILFAVFDSLE 236
                        250       260
                 ....*....|....*....|...
gi 296439339 645 GFFILLFGTIMDHKIRDALRMRM 667
Cdd:cd15990  237 GFVIVMVHCILRREVQDAVKCRV 259
7tmB2_CELSR1 cd15991
Cadherin EGF LAG seven-pass G-type receptor 1, member of the class B2 family of ...
401-664 3.23e-19

Cadherin EGF LAG seven-pass G-type receptor 1, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320657 [Multi-domain]  Cd Length: 254  Bit Score: 87.98  E-value: 3.23e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 401 LDYITCIGLSVSILSLVLCLIIeatvwsRVVVTEISYMRHVCIVNIAVSLLTANVWFIIGSHfniKAQDYNMCVAVTFFS 480
Cdd:cd15991    4 LKIITYTTVSLSLVALLITFIL------LVLIRTLRSNLHSIHKNLVAALFFSELIFLIGIN---QTENPFVCTVVAILL 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 481 HFFYLSLFFWMLFKALLiIYGILVIFRRMMKSRMMVIgFAIGYGCPLIIavTTVAITEPEKGYMRPEACWLNWDNTkALL 560
Cdd:cd15991   75 HYFYMSTFAWMFVEGLH-IYRMLTEVRNINTGHMRFY-YVVGWGIPAII--TGLAVGLDPQGYGNPDFCWLSVQDT-LIW 149
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 561 AFAIPAFVIVAVN-LIVVLVVAVNTQRPSIGSSKSqDVVIIMRISknvAILTPLLGLTWGFGIATlIEGTSLTFHIIFAL 639
Cdd:cd15991  150 SFAGPIGIVVIINtVIFVLAAKASCGRRQRYFEKS-GVISMLRTA---FLLLLLISATWLLGLMA-VNSDTLSFHYLFAI 224
                        250       260
                 ....*....|....*....|....*
gi 296439339 640 LNAFQGFFILLFGTIMDHKIRDALR 664
Cdd:cd15991  225 FSCLQGIFIFFFHCIFNKEVRKHLK 249
7tmB2_EMR cd15439
epidermal growth factor-like module-containing mucin-like hormone receptors, member of the ...
398-664 5.10e-19

epidermal growth factor-like module-containing mucin-like hormone receptors, member of the class B2 family of seven-transmembrane G protein-coupled receptors; group II adhesion GPCRs, including the epidermal growth factor (EGF)-module-containing, mucin-like hormone receptor (EMR1-4) and the leukocyte cell-surface antigen CD97, are primarily expressed in cells of the immune system. All EGF-TM7 receptors, which belong to the B2 subfamily of adhesion GPCRs, are members of group II, except for ETL (EGF-TM7-latrophilin related protein), which is classified into group I. Members of the EGF-TM7 receptors are characterized by the presence of varying number of N-terminal EGF-like domains, which play critical roles in ligand recognition and cell adhesion, linked by a stalk region to a class B seven-transmembrane domain. In the case of EMR2, alternative splicing results in four isoforms possessing either two (EGF1,2), three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. EMR2 shares strong sequence homology with CD97, differing by only six amino acids. CD97 is widely expressed on lymphocytes, monocytes, macrophages, dendritic cells, granulocytes and smooth muscle cells as well as in a variety of human tumors including colorectal, gastric, esophageal pancreatic, and thyroid carcinoma. However, unlike CD97, EMR2 is not found in those of CD97-positive tumor cells and is not expressed on lymphocytes but instead on monocytes, macrophages and granulocytes. CD97 has three known ligands: CD55, decay-accelerating factor for regulation of complement system; chondroitin sulfate, a glycosaminoglycan found in the extracellular matrix; and the integrin alpha5beta1, which play a role in angiogenesis. Although EMR2 does not effectively interact with CD55, the fourth EGF-like domain of this receptor binds to chondroitin sulfate to mediate cell attachment.


Pssm-ID: 320555 [Multi-domain]  Cd Length: 263  Bit Score: 87.40  E-value: 5.10e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 398 DKVLDYITCIGLSVSILSLVLCLIIEATVWSrvvVTEISYMRHVcivNIAVSLLTANVWFIIGSHfniKAQDYNMCVAVT 477
Cdd:cd15439    1 DLALTVITYVGLIISLLCLFLAILTFLLCRS---IRNTSTSLHL---QLSLCLFLADLLFLVGID---RTDNKVLCSIIA 71
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 478 FFSHFFYLSLFFWMLFKAL---LIIYGILVIFRRMMKSRMMVIGFAIGYGCPLIIaVTTVAITEPEkGYMRPEACWLNWD 554
Cdd:cd15439   72 GFLHYLFLACFAWMFLEAVhlfLTVRNLKVVNYFSSHRFKKRFMYPVGYGLPAVI-VAISAAVNPQ-GYGTPKHCWLSME 149
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 555 NtKALLAFAIPAFVIVAVNLIVVLVVAVNTQRPSigSSKSQDVVIImrisKNVAILT-------PLLGLTWGFGIaTLIE 627
Cdd:cd15439  150 K-GFIWSFLGPVCVIIVINLVLFCLTLWILREKL--SSLNAEVSTL----KNTRLLTfkaiaqlFILGCTWILGL-FQVG 221
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 296439339 628 GTSLTFHIIFALLNAFQGFFILLFGTIMDHKIRDALR 664
Cdd:cd15439  222 PVATVMAYLFTITNSLQGVFIFLVHCLLNRQVREEYR 258
7tmB2_GPR128 cd15257
orphan adhesion receptor GPR128, member of the class B2 family of seven-transmembrane G ...
398-653 1.07e-18

orphan adhesion receptor GPR128, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR128 is an orphan receptor of the adhesion family (subclass B2) that belongs to the class B GPCRs. Expression of GPR128 was detected in the mouse intestinal mucosa and is thought to be involved in energy balance, as its knockout mice showed a decrease in body weight gain and an increase in intestinal contraction frequency compared to wild-type controls. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320385 [Multi-domain]  Cd Length: 303  Bit Score: 87.24  E-value: 1.07e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 398 DKVLDYITCIGLSVSILSLVLClIIEATVWSRVVVTEISYMrhvcIVNIAVSLLTANVWFIIG----------------- 460
Cdd:cd15257    1 AKTLDIISTIGCVLSIAGLVIT-IIFHLHTRKLRKSSVTWV----LLNLCSSLLLFNIIFTSGventnndyeistvpdre 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 461 SHFNIKAQDY-----NMCVAVTFFSHFFYLSLFFWMLFKALLIIYgilvIFRRMMKS---RMMVIGFAIGYGCPLIIAVT 532
Cdd:cd15257   76 TNTVLLSEEYvepdtDVCTAVAALLHYFLLVTFMWNAVYSAQLYL----LLIRMMKPlpeMFILQASAIGWGIPAVVVAI 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 533 TVAIT--------EPEKGYMRPEACWL-----NWDNTKALL-AFAIPAFVIVAVNLIVVLVVAVNTQRPSIGSSKSQDVV 598
Cdd:cd15257  152 TLGATyrfptslpVFTRTYRQEEFCWLaaldkNFDIKKPLLwGFLLPVGLILITNVILFIMTSQKVLKKNNKKLTTKKRS 231
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 296439339 599 IIMRISKNVAILTpLLGLTWGFGIATLI--EGTSLTFHIIFALLNAFQGFFILLFGT 653
Cdd:cd15257  232 YMKKIYITVSVAV-VFGITWILGYLMLVnnDLSKLVFSYIFCITNTTQGVQIFILYT 287
7tmB2_ETL cd15437
Epidermal Growth Factor, latrophilin and seven transmembrane domain-containing protein 1; ...
400-661 1.27e-18

Epidermal Growth Factor, latrophilin and seven transmembrane domain-containing protein 1; member of the class B2 family of seven-transmembrane G protein-coupled receptors; ETL (EGF-TM7-latrophilin-related protein) belongs to Group I adhesion GPCRs, which also include latrophilins (also called lectomedins or latrotoxin receptors). All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. ETL, for instance, contains EGF-like repeats, which also present in other EGF-TM7 adhesion GPCRs, such as Cadherin EGF LAG seven-pass G-type receptors (CELSR1-3), EGF-like module receptors (EMR1-3), CD97, and Flamingo. ETL is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320553 [Multi-domain]  Cd Length: 258  Bit Score: 86.08  E-value: 1.27e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 400 VLDYITCIGLSVSILSLVLCLIieaTVWsrvVVTEISYMRHVCIVNIAVSLLTANVWFIIGSHFNikaQDYNMCVAVTFF 479
Cdd:cd15437    3 VLTRITQLGIIISLICLSMCIF---TFW---FFSEIQSTRTTIHKNLCCSLFLAELIFLIGINMN---ANKLFCSIIAGL 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 480 SHFFYLSLFFWMLFKAL---LIIYGilVIFRRMMKSRMMvigFAIGYGCPLIIAVTTVAITEpeKGYMRPEACWLNWDNT 556
Cdd:cd15437   74 LHYFFLAAFAWMCIEGIhlyLIVVG--VIYNKGFLHKNF---YIFGYGSPAVVVGISAALGY--KYYGTTKVCWLSTENN 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 557 kALLAFAIPAFVIVAVNLIVVLVVAVNTQRPSIGSSKSQDVVIIMRISKNVAI-LTPLLGLTWGFGIATLIEGTSLTFHI 635
Cdd:cd15437  147 -FIWSFIGPACLIILVNLLAFGVIIYKVFRHTAMLKPEVSCYENIRSCARGALaLLFLLGATWIFGVLHVVYGSVVTAYL 225
                        250       260
                 ....*....|....*....|....*.
gi 296439339 636 iFALLNAFQGFFILLFGTIMDHKIRD 661
Cdd:cd15437  226 -FTISNAFQGMFIFIFLCVLSRKIQE 250
7tmB2_EMR_Adhesion_II cd15931
EGF-like module receptors, group II adhesion GPCRs, member of class B2 family of ...
398-664 4.97e-18

EGF-like module receptors, group II adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; group II adhesion GPCRs, including the leukocyte cell-surface antigen CD97 and the epidermal growth factor (EGF)-module-containing, mucin-like hormone receptor (EMR1-4), are primarily expressed in cells of the immune system. All EGF-TM7 receptors, which belong to the B2 subfamily B2 of adhesion GPCRs, are members of group II, except for ETL (EGF-TM7-latrophilin related protein), which is classified into group I. Members of the EGF-TM7 receptors are characterized by the presence of varying numbers of N-terminal EGF-like domains, which play critical roles in ligand recognition and cell adhesion, linked by a stalk region to a class B seven-transmembrane domain. In the case of CD97, alternative splicing results in three isoforms possessing either three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. On the other hand, EMR2 generates four isoforms possessing either two (EGF1,2), three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. For example, CD97, which is involved in angiogenesis and the migration and invasion of tumor cells, has been shown to promote cell aggregation in a GPS proteolysis-dependent manner. CD97 is widely expressed on lymphocytes, monocytes, macrophages, dendritic cells, granulocytes and smooth muscle cells as well as in a variety of human tumors including colorectal, gastric, esophageal pancreatic, and thyroid carcinoma. EMR2 shares strong sequence homology with CD97, differing by only six amino acids. However, unlike CD97, EMR2 is not found in those of CD97-positive tumor cells and is not expressed on lymphocytes but instead on monocytes, macrophages and granulocytes. CD97 has three known ligands: CD55, decay-accelerating factor for regulation of complement system; chondroitin sulfate, a glycosaminoglycan found in the extracellular matrix; and the integrin alpha5beta1, which play a role in angiogenesis. Although EMR2 does not effectively interact with CD55, the fourth EGF-like domain of this receptor binds to chondroitin sulfate to mediate cell attachment.


Pssm-ID: 320597 [Multi-domain]  Cd Length: 262  Bit Score: 84.49  E-value: 4.97e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 398 DKVLDYITCIGLSVSILSLVLCliieatVWSRVVVTEISYMRHVCIVNIAVSLLTANVWFIIGSHfniKAQDYNMCVAVT 477
Cdd:cd15931    1 DPFLEWINRVGVIVSLFCLGLA------IFTFLLCRWIPKINTTAHLHLCLCLSMSHTLFLAGIE---YVENELACTVMA 71
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 478 FFSHFFYLSLFFWMLFKALLI------IYGILVIFRRMMKSRMMvigFAIGYGCPLIIAVTTVAITepEKGYMRPEACWL 551
Cdd:cd15931   72 GLLHYLFLASFVWMLLEALQLhllvrrLTKVQVIQRDGLPRPLL---CLIGYGVPFLIVGVSALVY--SDGYGEAKMCWL 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 552 NWDnTKALLAFAIPAFVIVAVNLIV------VLVVAVNTQRPSIGSSKSQDVVIIMRISKNVailtpLLGLTWGFGIaTL 625
Cdd:cd15931  147 SQE-RGFNWSFLGPVIAIIGINWILfcatlwCLRQTLSNMNSDISQLKDTRLLTFKAVAQLF-----ILGCTWVLGL-FQ 219
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 296439339 626 IEGTSLTFHIIFALLNAFQGFFILLFGTIMDHKIRDALR 664
Cdd:cd15931  220 TNPVALVFQYLFTILNSLQGAFLFLVHCLLNKEVREEYI 258
7tmB2_Latrophilin-1 cd16007
Latrophilin-1, member of the class B2 family of seven-transmembrane G protein-coupled ...
400-659 1.43e-17

Latrophilin-1, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320673 [Multi-domain]  Cd Length: 258  Bit Score: 83.05  E-value: 1.43e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 400 VLDYITCIGLSVSILSLVLCliIEATVWSRVVVTEisymRHVCIVNIAVSLLTANVWFIIGshfnIKAQDYNM-CVAVTF 478
Cdd:cd16007    3 LLSVITWVGIVISLVCLAIC--ISTFCFLRGLQTD----RNTIHKNLCINLFLAELLFLIG----IDKTQYQIaCPIFAG 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 479 FSHFFYLSLFFWMLFKALLIIYGILVIFRRMMKSRMMVigFAIGYGCPLIIAVTTVAITEpeKGYMRPEACWLNWDNTkA 558
Cdd:cd16007   73 LLHFFFLAAFSWLCLEGVQLYLMLVEVFESEYSRKKYY--YLCGYCFPALVVGISAAIDY--RSYGTEKACWLRVDNY-F 147
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 559 LLAFAIPAFVIVAVNLIVVLVVAVNTQR-PSIGSSKSQDVVIIMRISKNVAILTPLLGLTWGFGIaTLIEGTSLTFHIIF 637
Cdd:cd16007  148 IWSFIGPVSFVIVVNLVFLMVTLHKMIRsSSVLKPDSSRLDNIKSWALGAITLLFLLGLTWAFGL-LFINKESVVMAYLF 226
                        250       260
                 ....*....|....*....|..
gi 296439339 638 ALLNAFQGFFILLFGTIMDHKI 659
Cdd:cd16007  227 TTFNAFQGMFIFIFHCALQKKV 248
7tmB2_CELSR3 cd15993
Cadherin EGF LAG seven-pass G-type receptor 3, member of the class B2 family of ...
445-662 1.45e-17

Cadherin EGF LAG seven-pass G-type receptor 3, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. Celsr3 is expressed in both the developing and adult mouse brain. It has been functionally implicated in proper neuronal migration and axon guidance in the CNS. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320659 [Multi-domain]  Cd Length: 254  Bit Score: 82.97  E-value: 1.45e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 445 NIAVSLLTANVWFIIGSHfniKAQDYNMCVAVTFFSHFFYLSLFFWMLFKALLiIYGILVIFRRMMKSRMMVIgFAIGYG 524
Cdd:cd15993   42 NIAAALFLSELLFLLGIN---RTENQFLCTVVAILLHYFFLSTFAWLFVQGLH-IYRMQTEARNVNFGAMRFY-YAIGWG 116
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 525 CPLIIAVTTVAItEPEkGYMRPEACWLNWDNtKALLAFAIPAFVIVAVNLIVVLVVAVNTQRPSIGSSKSQDVVIIMRIS 604
Cdd:cd15993  117 VPAIITGLAVGL-DPE-GYGNPDFCWISIHD-KLVWSFAGPIVVVIVMNGVMFLLVARMSCSPGQKETKKTSVLMTLRSS 193
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 296439339 605 knvAILTPLLGLTWGFGIATlIEGTSLTFHIIFALLNAFQGFFILLFGTIMDHKIRDA 662
Cdd:cd15993  194 ---FLLLLLISATWLFGLLA-VNNSVLAFHYLHAILCCLQGLAVLLLFCVLNEEVQEA 247
7tmB2_Latrophilin-3 cd16005
Latrophilin-3, member of the class B2 family of seven-transmembrane G protein-coupled ...
398-660 1.26e-16

Latrophilin-3, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320671 [Multi-domain]  Cd Length: 258  Bit Score: 80.37  E-value: 1.26e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 398 DKVLDYITCIGLSVSILSLVLCLiieatvWSRVVVTEISYMRHVCIVNIAVSLLTANVWFIIGSHfniKAQDYNMCVAVT 477
Cdd:cd16005    1 DLLLDVITWVGILLSLVCLLICI------FTFCFFRGLQSDRNTIHKNLCISLFVAELLFLIGIN---RTDQPIACAVFA 71
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 478 FFSHFFYLSLFFWMLFKALLIIYGILVIFRRMMKSRMMVigFAIGYGCPLIIAVTTVAITEpeKGYMRPEACWLNWDnTK 557
Cdd:cd16005   72 ALLHFFFLAAFTWMFLEGVQLYIMLVEVFESEHSRRKYF--YLVGYGMPALIVAVSAAVDY--RSYGTDKVCWLRLD-TY 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 558 ALLAFAIPAFVIVAVNLIVVLVVAVNT------QRPSIGSSKSQDVVIIMRISknvaiLTPLLGLTWGFGIATLIEGTSL 631
Cdd:cd16005  147 FIWSFIGPATLIIMLNVIFLGIALYKMfhhtaiLKPESGCLDNIKSWVIGAIA-----LLCLLGLTWAFGLMYINESTVI 221
                        250       260
                 ....*....|....*....|....*....
gi 296439339 632 TFHIiFALLNAFQGFFILLFGTIMDHKIR 660
Cdd:cd16005  222 MAYL-FTIFNSLQGMFIFIFHCVLQKKVR 249
7tmB2_GPR64 cd15444
orphan adhesion receptor GPR64 and related proteins, member of subfamily B2 of the class B ...
400-664 9.12e-16

orphan adhesion receptor GPR64 and related proteins, member of subfamily B2 of the class B secretin-like receptors of seven-transmembrane G protein-coupled receptors; GPR64 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include orphan GPCRs such as GPR56, GPR97, GPR112, GPR114, and GPR126. GPR64 is mainly expressed in the epididymis of male reproductive tract, and targeted deletion of GPR64 causes sperm stasis and efferent duct blockage due to abnormal fluid reabsorption, resulting in male infertility. GPR64 is also over-expressed in Ewing's sarcoma (ES), as well as upregulated in other carcinomas from kidney, prostate or lung, and promotes invasiveness and metastasis in ES via the upregulation of placental growth factor (PGF) and matrix metalloproteinase (MMP) 1. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320560 [Multi-domain]  Cd Length: 271  Bit Score: 77.94  E-value: 9.12e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 400 VLDYITCIG--LSVSILSLVLCLIIEATVWSRVVVTEIsymrhvcIVNIAVSLLTANVWFIIGSHFNIKAQDYNMCVAVT 477
Cdd:cd15444    3 ILTFITYIGcgLSAIFLSVTLVTYIAFEKIRRDYPSKI-------LIQLCVALLLLNLVFLLDSWIALYKDIVGLCISVA 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 478 FFSHFFYLSLFFWMLFKALLIIYGILVIFRRMMKSRMMVIGFaIGYGCPLIIAVTTVAITEPEKGYMR---------PEA 548
Cdd:cd15444   76 VFLHYFLLVSFTWMGLEAFHMYLALVKVFNTYIRKYILKFCI-VGWGVPAVVVAIVLAVSKDNYGLGSygkspngstDDF 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 549 CWLNwdNTKALLAFAIPAF-VIVAVNLIVVLVVAVNTQRPSIGSSKSQDVVIIMRISKNVAILTPLLGLTWGFGIATLIE 627
Cdd:cd15444  155 CWIN--NNIVFYITVVGYFcVIFLLNISMFIVVLVQLCRIKKQKQLGAQRKTSLQDLRSVAGITFLLGITWGFAFFAWGP 232
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 296439339 628 GtSLTFHIIFALLNAFQGFFILLFGTIMDHKIRDALR 664
Cdd:cd15444  233 V-NLAFMYLFAIFNTLQGFFIFIFYCVAKENVRKQWR 268
7tmB2_GPR126-like_Adhesion_VIII cd15258
orphan GPR126 and related proteins, group VIII adhesion GPCRs, member of the class B2 family ...
399-665 6.10e-15

orphan GPR126 and related proteins, group VIII adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Group VIII adhesion GPCRs include orphan GPCRs such as GPR56, GPR64, GPR97, GPR112, GPR114, and GPR126. GPR56 is involved in the regulation of oligodendrocyte development and myelination in the central nervous system via coupling to G(12/13) proteins, which leads to the activation of RhoA GTPase. GPR126, on the other hand, is required for Schwann cells, but not oligodendrocyte myelination in the peripheral nervous system. Gpr64 is mainly expressed in the epididymis of male reproductive tract, and targeted deletion of GPR64 causes sperm stasis and efferent duct blockage due to abnormal fluid reabsorption, resulting in male infertility. GPR64 is also over-expressed in Ewing's sarcoma (ES), as well as upregulated in other carcinomas from kidney, prostate or lung, and promotes invasiveness and metastasis in ES via the upregulation of placental growth factor (PGF) and matrix metalloproteinase (MMP) 1. GPR97 is identified as a lymphatic adhesion receptor that is specifically expressed in lymphatic endothelium, but not in blood vascular endothelium, and is shown to regulate migration of lymphatic endothelial cells via the small GTPases RhoA and cdc42. GPR112 is specifically expressed in normal enterochromatin cells and gastrointestinal neuroendocrine carcinoma cells, but its biological function is unknown. GPR114 is mainly found in granulocytes (polymorphonuclear leukocytes), and GPR114-transfected cells induced an increase in cAMP levels via coupling to G(s) protein. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320386 [Multi-domain]  Cd Length: 267  Bit Score: 75.53  E-value: 6.10e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 399 KVLDYITCIGLSVSILSLVLCLIieATVWSRVVVTEISYMRHVcivNIAVSLLTANVWFIIGSHFNIKAQDyNMCVAVTF 478
Cdd:cd15258    2 HILTFISYVGCGISAIFLAITIL--TYIAFRKLRRDYPSKIHM---NLCAALLLLNLAFLLSSWIASFGSD-GLCIAVAV 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 479 FSHFFYLSLFFWM------LFKALLIIYGILVifrrmmksRMMVIGF-AIGYGCPLIIAVTTVAITEPEKGYMR------ 545
Cdd:cd15258   76 ALHYFLLACLTWMgleafhLYLLLVKVFNTYI--------RRYILKLcLVGWGLPALLVTLVLSVRSDNYGPITipngeg 147
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 546 ---PEACWLNWDntkalLAFAIPAF----VIVAVNLIVVLVVAVNTQRPSIGSSKSQDVVIIMRIsKNVAILTPLLGLTW 618
Cdd:cd15258  148 fqnDSFCWIRDP-----VVFYITVVgyfgLTFLFNMVMLATVLVQICRLREKAQATPRKRALHDL-LTLLGLTFLLGLTW 221
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 296439339 619 GFGIATLIEgTSLTFHIIFALLNAFQGFFILLFGTIMDHKIRDALRM 665
Cdd:cd15258  222 GLAFFAWGP-FNLPFLYLFAIFNSLQGFFIFIWYCSMKENVRKQWRA 267
7tmB2_GPR126 cd15996
orphan adhesion receptor GPR126, member of the class B2 family of seven-transmembrane G ...
399-664 4.72e-14

orphan adhesion receptor GPR126, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR126 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include orphan GPCRs such as GPR56, GPR64, GPR97, GPR112, and GPR114. GPR126 is required in Schwann cells for proper differentiation and myelination via G-Protein Activation. GPR126 is believed to couple to G(s)-protein, which leads to activation of adenylate cyclase for cAMP production. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320662  Cd Length: 271  Bit Score: 73.00  E-value: 4.72e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 399 KVLDYITCIGLSVSilslvlCLIIEATVWSRVVVTEI--SYMRHVcIVNIAVSLLTANVWFIIG---SHFNIKAqdynMC 473
Cdd:cd15996    2 RVLTFITYIGCGIS------AIFSAATLLTYIAFEKLrrDYPSKI-LMNLSTALLFLNLVFLLDgwiASFEIDE----LC 70
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 474 VAVTFFSHFFYLSLFFWMLFKALLIIYGILVIFRRMMKsRMMVIGFAIGYGCPLIIAVTTVAITEPEKGYMR-------- 545
Cdd:cd15996   71 ITVAVLLHFFLLATFTWMGLEAIHMYIALVKVFNTYIR-RYILKFCIIGWGLPALIVSIVLASTNDNYGYGYygkdkdgq 149
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 546 --PEACWLNWDNTKALLA---FAIPAFVIVAVNLIVVLVVAVNTQRPSIGSSKSQdvviIMRISKNVAILTPLLGLTWGF 620
Cdd:cd15996  150 ggDEFCWIKNPVVFYVTCaayFGIMFLMNVAMFIVVMVQICGRNGKRSNRTLREE----ILRNLRSVVSLTFLLGMTWGF 225
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 296439339 621 giATLIEG-TSLTFHIIFALLNAFQGFFILLFGTIMDHKIRDALR 664
Cdd:cd15996  226 --AFFAWGpVNLAFMYLFTIFNSLQGLFIFVFHCALKENVQKQWR 268
7tmB2_Latrophilin-2 cd16006
Latrophilin-2, member of the class B2 family of seven-transmembrane G protein-coupled ...
400-660 5.41e-14

Latrophilin-2, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320672 [Multi-domain]  Cd Length: 258  Bit Score: 72.64  E-value: 5.41e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 400 VLDYITCIGLSVSILSLVLCLiieatvWSRVVVTEISYMRHVCIVNIAVSLLTANVWFIIGshfnIKAQDYNM-CVAVTF 478
Cdd:cd16006    3 LLTVITWVGIVISLVCLAICI------FTFCFFRGLQSDRNTIHKNLCINLFIAEFIFLIG----IDKTEYKIaCPIFAG 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 479 FSHFFYLSLFFWMLFKALLIIYGILVIFRRMMKSRMMVigFAIGYGCPLIIAVTTVAITEpeKGYMRPEACWLNWDNtKA 558
Cdd:cd16006   73 LLHFFFLAAFAWMCLEGVQLYLMLVEVFESEYSRKKYY--YVAGYLFPATVVGVSAAIDY--KSYGTEKACWLRVDN-YF 147
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 559 LLAFAIPAFVIVAVNLIVVLVVAVNTQRPSigSSKSQDVVIIMRISKNVA---ILTPLLGLTWGFGIaTLIEGTSLTFHI 635
Cdd:cd16006  148 IWSFIGPVTFIILLNLIFLVITLCKMVKHS--NTLKPDSSRLENIKSWVLgafALLCLLGLTWSFGL-LFINEETIVMAY 224
                        250       260
                 ....*....|....*....|....*
gi 296439339 636 IFALLNAFQGFFILLFGTIMDHKIR 660
Cdd:cd16006  225 LFTIFNAFQGMFIFIFHCALQKKVR 249
7tmB2_Latrophilin cd15436
Latrophilins, member of the class B2 family of seven-transmembrane G protein-coupled receptors; ...
398-660 8.32e-14

Latrophilins, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320552 [Multi-domain]  Cd Length: 258  Bit Score: 72.13  E-value: 8.32e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 398 DKVLDYITCIGLSVSILSLVLCliIEATVWSRVVVTEisymRHVCIVNIAVSLLTANVWFIIGshfnIKAQDYNMCVAVT 477
Cdd:cd15436    1 ELLLFVITWVGIVISLVCLLIC--IFTFCFFRGLQTD----RNTIHKNLCINLFIAELLFLIG----INRTQYTIACPIF 70
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 478 F-FSHFFYLSLFFWMLFKALLIIYGILVIFRRMMKSRMMVigFAIGYGCPLIIAVTTVAITepEKGYMRPEACWLNWDNT 556
Cdd:cd15436   71 AgLLHFFFLAAFCWLCLEGVQLYLLLVEVFESEYSRRKYF--YLCGYSFPALVVAVSAAID--YRSYGTEKACWLRVDNY 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 557 kALLAFAIPAFVIVAVNLIVVLVV------AVNTQRPSIGSSKSQDVVIIMRISknvaiLTPLLGLTWGFGIaTLIEGTS 630
Cdd:cd15436  147 -FIWSFIGPVTFVITLNLVFLVITlhkmvsHSDLLKPDSSRLDNIKSWALGAIA-----LLFLLGLTWSFGL-MFINEES 219
                        250       260       270
                 ....*....|....*....|....*....|
gi 296439339 631 LTFHIIFALLNAFQGFFILLFGTIMDHKIR 660
Cdd:cd15436  220 VVMAYLFTIFNAFQGVFIFIFHCALQKKVR 249
7tmB1_DH_R cd15263
insect diuretic hormone receptors, member of the class B family of seven-transmembrane G ...
407-669 2.90e-13

insect diuretic hormone receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; This group includes G protein-coupled receptors that specifically bind to insect diuretic hormones found in Manduca sexta (moth) and Acheta domesticus (the house cricket), among others. Insect diuretic hormone and their GPCRs play critical roles in the regulation of water and ion balance. Thus they are attractive targets for developing new insecticides. Activation of the diuretic hormone receptors stimulate adenylate cyclase, thereby increasing cAMP levels in Malpighian tube. They belong to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of Gs family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx.


Pssm-ID: 320391 [Multi-domain]  Cd Length: 272  Bit Score: 70.48  E-value: 2.90e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 407 IGLSVSILSLVLCLIIEATVwsrvvvTEISYMRHVCIVNIAVSLLTANV-WFIIGSHFNIKAQDYNMCVAVTFFSHFFYL 485
Cdd:cd15263   10 IGYSLSLVALSLALWIFLYF------KDLRCLRNTIHTNLMFTYILADLtWILTLTLQVSIGEDQKSCIILVVLLHYFHL 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 486 SLFFWMLFKALLIIygILVI--FRRmMKSRMMVIGFaIGYGCPLIIaVTTVAIT-------EPEKGYMRPEA--C-WLNW 553
Cdd:cd15263   84 TNFFWMFVEGLYLY--MLVVetFSG-ENIKLRVYAF-IGWGIPAVV-IVIWAIVkalaptaPNTALDPNGLLkhCpWMAE 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 554 DNTKALlaFAIPAFVIVAVNLIVVLVV--AVNTQRPSIGSSKSQDVviiMRISKNVAILTPLLGLTWGFGIATLIEGTS- 630
Cdd:cd15263  159 HIVDWI--FQGPAILVLAVNLVFLVRImwVLITKLRSANTVETQQY---RKAAKALLVLIPLLGITYILVIAGPTEGIAa 233
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 296439339 631 LTFHIIFALLNAFQGFFILLFGTIMDHKIRDALRMRMSS 669
Cdd:cd15263  234 NIFEYVRAVLLSTQGFTVALFYCFLNTEVRNTLRHHFER 272
7tmB2_CELSR2 cd15992
Cadherin EGF LAG seven-pass G-type receptor 2, member of the class B2 family of ...
439-664 3.69e-13

Cadherin EGF LAG seven-pass G-type receptor 2, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320658  Cd Length: 255  Bit Score: 69.85  E-value: 3.69e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 439 RHVCIVNIAVSLLTANVWFIIGSHfniKAQDYNMCVAVTFFSHFFYLSLFFWMLFKALLIiYGILVIFRRMMKSRMMVIg 518
Cdd:cd15992   36 KTSIRKNGATALFLSELVFILGIN---QADNPFACTVIAILLHFFYLCTFSWLFLEGLHI-YRMLSEVRDINYGPMRFY- 110
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 519 FAIGYGCPLIIAVTTVAItEPEkGYMRPEACWLNWDNTkALLAFAIPAFVIVAVNLIVVLVVAVNTQRPSIGSSKSQDVV 598
Cdd:cd15992  111 YLIGWGVPAFITGLAVGL-DPE-GYGNPDFCWLSIYDT-LIWSFAGPVAFAVSMNVFLYILSSRASCSAQQQSFEKKKGP 187
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 296439339 599 IIMRISKNVAILtpLLGLTWGFGIATlIEGTSLTFHIIFALLNAFQGFFILLFGTIMDHKIRDALR 664
Cdd:cd15992  188 VSGLRTAFTVLL--LVSVTCLLALLS-VNSDVILFHYLFAGFNCLQGPFIFLSHVVLLKEVRKALK 250
7tmB2_GPR97 cd15442
orphan adhesion receptor GPR97, member of the class B2 family of seven-transmembrane G ...
444-655 6.66e-11

orphan adhesion receptor GPR97, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR97 is an orphan receptor that has been classified into the group VIII of adhesion GPCRs. Other members of the Group VII include GPR56, GPR64, GPR112, GPR114, and GPR126. GPR97 is identified as a lymphatic adhesion receptor that is specifically expressed in lymphatic endothelium, but not in blood vascular endothelium, and is shown to regulate migration of lymphatic endothelial cells via the small GTPases RhoA and cdc42. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320558 [Multi-domain]  Cd Length: 277  Bit Score: 63.66  E-value: 6.66e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 444 VNIAVSLLTANVWFIIGSHFNIKAQDyNMCVAVTFFSHFFYLSLFFWMLFKALLIIYGILVIFRRMMKSRMMVIGFaIGY 523
Cdd:cd15442   46 VNLSSSLLLLNLAFLLNSGVSSRAHP-GLCKALGGVTHYFLLCCFTWMAIEAFHLYLLAIKVFNTYIHHYFAKLCL-VGW 123
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 524 GCPLIIAVTTVAITEPEKGYMRPEA-------CWLNWDNTKALLAFAIPAFVIVAVNLIVVLVVAV----NTQRPSIGSS 592
Cdd:cd15442  124 GFPALVVTITGSINSYGAYTIMDMAnrttlhlCWINSKHLTVHYITVCGYFGLTFLFNTVVLGLVAwkifHLQSATAGKE 203
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 296439339 593 KSQDvviiMRISKNVAILTPLLGLTWGFGIATLIeGTSLTFHIIFALLNAFQGFFILLFGTIM 655
Cdd:cd15442  204 KCQA----WKGGLTVLGLSCLLGVTWGLAFFTYG-SMSVPTVYIFALLNSLQGLFIFIWFVIL 261
7tmB1_hormone_R cd15041
The subfamily B1 of hormone receptors (secretin-like), member of the class B family ...
399-668 7.95e-11

The subfamily B1 of hormone receptors (secretin-like), member of the class B family seven-transmembrane G protein-coupled receptors; The B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of this subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. Moreover, the B1 subfamily receptors play key roles in hormone homeostasis and are promising drug targets in various human diseases including diabetes, osteoporosis, obesity, neurodegenerative conditions (Alzheimer###s and Parkinson's), cardiovascular disease, migraine, and psychiatric disorders (anxiety, depression). Furthermore, the subfamilies B2 and B3 consist of receptors that are capable of interacting with epidermal growth factors (EGF) and the Drosophila melanogaster Methuselah gene product (Mth), respectively. The class B GPCRs have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi, or prokaryotes.


Pssm-ID: 341321 [Multi-domain]  Cd Length: 273  Bit Score: 63.40  E-value: 7.95e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 399 KVLDYITCIGLSVSILSLVLCLIIeATVWSRVVVTEISYMRHV---CIVNIAVSLLTANVwFIIGSHFNIKAQDYNM--- 472
Cdd:cd15041    2 LVVYYIYLVGYSLSLVALLPAIVI-FLYFRSLRCTRIRLHINLflsFILRAVFWIIWDLL-VVYDRLTSSGVETVLMqnp 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 473 --CVAVTFFSHFFYLSLFFWMLFKALLIIYGILVIFRRMMKSRMMVigFAIGYGCPLIIaVTTVAITepeKGYMRPEACW 550
Cdd:cd15041   80 vgCKLLSVLKRYFKSANYFWMLCEGLYLHRLIVVAFFSEPSSLKLY--YAIGWGLPLVI-VVIWAIV---RALLSNESCW 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 551 LNWDNTKALLAFAIPAFVIVAVNLIV---VLVVAVNTQRPSIGSSKSQdvviIMRISKNVAILTPLLGLTWGFGIATLIE 627
Cdd:cd15041  154 ISYNNGHYEWILYGPNLLALLVNLFFlinILRILLTKLRSHPNAEPSN----YRKAVKATLILIPLFGIQYLLTIYRPPD 229
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 296439339 628 GTSL--TFHIIFALLNAFQGFFILLFGTIMDHKIRDALRMRMS 668
Cdd:cd15041  230 GSEGelVYEYFNAILNSSQGFFVAVIYCFLNGEVQSELKRKWS 272
7tmB1_CRF-R1 cd15445
corticotropin-releasing factor receptor 1, member of the class B family of seven-transmembrane ...
404-666 8.15e-11

corticotropin-releasing factor receptor 1, member of the class B family of seven-transmembrane G protein-coupled receptors; The vertebrate corticotropin-releasing factor (CRF) receptors are predominantly expressed in central nervous system with high levels in cortex tissue, brain stem, and pituitary. They have two isoforms as a result of alternative splicing of the same receptor gene: CRF-R1 and CRF-R2, which differ in tissue distribution and ligand binding affinities. Recently, a third CRF receptor (CRF-R3) has been identified in catfish pituitary. The catfish CRF-R1 is highly homologous to CRF-R3. CRF is a 41-amino acid neuropeptide that plays a central role in coordinating neuroendocrine, behavioral, and autonomic responses to stress by acting as the primary neuroregulator of the hypothalamic-pituitary-adrenal axis, which controls the levels of cortisol and other stress related hormones. In addition, the CRF family of neuropeptides also includes structurally related peptides such as mammalian urocortin, fish urotensin I, and frog sauvagine. The actions of CRF and CRF-related peptides are mediated through specific binding to CRF-R1 and CRF-R2. CRF and urocortin 1 bind and activate mammalian CRF-R1 with similar high affinities. By contrast, urocortin 2 and urocortin 3 do not bind to CRF-R1 or stimulate CRF-R1-mediated cAMP formation. Urocortin 1 also shows high affinity for mammalian CRF-R2, whereas CRF has significantly lower affinity for this receptor. These evidence suggest that urocortin 1 is an endogenous ligand for CRF-R1 and CRF-R2. The CRF receptors are members of the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, and parathyroid hormone (PTH). These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on its cellular location and function, CRF receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320561 [Multi-domain]  Cd Length: 265  Bit Score: 63.03  E-value: 8.15e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 404 ITCIGLSVSILSLVLCLIIEATVWSrvvvteISYMRHVCIVNIAVSLLTANV-WFIIGSHFNIKAQDYNM--CVAVTFFS 480
Cdd:cd15445    7 INYLGHCISLVALLVAFVLFLRLRS------IRCLRNIIHWNLITAFILRNAtWFVVQLTMSPEVHQSNVvwCRLVTAAY 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 481 HFFYLSLFFWMLFKALLIIYGILVIFRRMMKSRMMVIgfAIGYGCPLIIAVTTvAITepeKGYMRPEACWL-NWDNTKAL 559
Cdd:cd15445   81 NYFHVTNFFWMFGEGCYLHTAIVLTYSTDKLRKWMFI--CIGWCIPFPIIVAW-AIG---KLYYDNEKCWFgKRAGVYTD 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 560 LAFAIPAFVIVAVNLIVVLVVaVNTQRPSIGSSKSQDVVIIMRISKNVAILTPLLGLTWGFGIATLIEG--TSLTFHIIF 637
Cdd:cd15445  155 YIYQGPMILVLLINFIFLFNI-VRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVNPGEDeiSRIVFIYFN 233
                        250       260
                 ....*....|....*....|....*....
gi 296439339 638 ALLNAFQGFFILLFGTIMDHKIRDALRMR 666
Cdd:cd15445  234 SFLESFQGFFVSVFYCFLNSEVRSAVRKR 262
7tmB1_CRF-R cd15264
corticotropin-releasing factor receptors, member of the class B family of seven-transmembrane ...
398-668 1.16e-10

corticotropin-releasing factor receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; The vertebrate corticotropin-releasing factor (CRF) receptors are predominantly expressed in central nervous system with high levels in cortex tissue, brain stem, and pituitary. They have two isoforms as a result of alternative splicing of the same receptor gene: CRF-R1 and CRF-R2, which differ in tissue distribution and ligand binding affinities. Recently, a third CRF receptor (CRF-R3) has been identified in catfish pituitary. The catfish CRF-R1 is highly homologous to CRF-R3. CRF is a 41-amino acid neuropeptide that plays a central role in coordinating neuroendocrine, behavioral, and autonomic responses to stress by acting as the primary neuroregulator of the hypothalamic-pituitary-adrenal axis, which controls the levels of cortisol and other stress related hormones. In addition, the CRF family of neuropeptides also includes structurally related peptides such as mammalian urocortin, fish urotensin I, and frog sauvagine. The actions of CRF and CRF-related peptides are mediated through specific binding to CRF-R1 and CRF-R2. CRF and urocortin 1 bind and activate mammalian CRF-R1 with similar high affinities. By contrast, urocortin 2 and urocortin 3 do not bind to CRF-R1 or stimulate CRF-R1-mediated cAMP formation. Urocortin 1 also shows high affinity for mammalian CRF-R2, whereas CRF has significantly lower affinity for this receptor. These evidence suggest that urocortin 1 is an endogenous ligand for CRF-R1 and CRF-R2. The CRF receptors are members of the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, and parathyroid hormone (PTH). These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on its cellular location and function, CRF receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320392 [Multi-domain]  Cd Length: 265  Bit Score: 62.82  E-value: 1.16e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 398 DKVLDYITCIGLSVSILSLVLCLIIEATVWSrvvvteISYMRHVCIVNIAVSLLTANV-WFIIGSHFNIKAQDYN--MCV 474
Cdd:cd15264    1 YKVALIIYYLGFSISLVALAVALIIFLYFRS------LRCLRNNIHCNLIVTFILRNVtWFIMQNTLTEIHHQSNqwVCR 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 475 AVTFFSHFFYLSLFFWMLFKALLIIYGILVIFR--RMMKSRMMVIGFaiGYGCPLIIAVTTVaitepeKGYMRPEACWLN 552
Cdd:cd15264   75 LIVTVYNYFQVTNFFWMFVEGLYLHTMIVWAYSadKIRFWYYIVIGW--CIPCPFVLAWAIV------KLLYENEHCWLP 146
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 553 -WDNTKALLAFAIPAFVIVAVNLIV---VLVVAVNTQRPSIGSSKSQdvviIMRISKNVAILTPLLGLTWG-FGIATLIE 627
Cdd:cd15264  147 kSENSYYDYIYQGPILLVLLINFIFlfnIVWVLITKLRASNTLETIQ----YRKAVKATLVLLPLLGITYMlFFINPGDD 222
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|..
gi 296439339 628 GTSLTFHIIF-ALLNAFQGFFILLFGTIMDHKIRDALRMRMS 668
Cdd:cd15264  223 KTSRLVFIYFnTFLQSFQGLFVAVFYCFLNGEVRSAIRKKFS 264
7tmB1_NPR_B4_insect-like cd15260
insect neuropeptide receptor subgroup B4 and related proteins, member of the class B family of ...
398-649 5.22e-10

insect neuropeptide receptor subgroup B4 and related proteins, member of the class B family of seven-transmembrane G protein-coupled receptors; This subgroup includes a neuropeptide receptor found in Nilaparvata lugens (brown planthopper) and its closely related proteins from mollusks and annelid worms. They belong to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. The class B GPCRs have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi, or prokaryotes.


Pssm-ID: 320388 [Multi-domain]  Cd Length: 267  Bit Score: 60.75  E-value: 5.22e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 398 DKVLDYITCIGLSVSILSLVLCLIIeatvwsrvvvteISYMRHV-CI-----VNIAVSLLTANVWFIIG---SHFNIKAQ 468
Cdd:cd15260    1 RQFVNYVYIGGYSVSLIALIISLAI------------FFSFRSLrCTritihMNLFISFALNNLLWIVWyklVVDNPEVL 68
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 469 DYN--MCVAVTFFSHFFYLSLFFWMLFKALLIIYGILVIFRRmmKSRMMVIGFAIGYGCPLIIAV--TTVAITEPEkgym 544
Cdd:cd15260   69 LENpiWCQALHVLLQYFMVCNYFWMFCEGLYLHTVLVVAFIS--EKSLMRWFIAIGWGVPLVITAiyAGVRASLPD---- 142
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 545 RPEACWLnwDNTKALLAFAIPAFVIVAVNLIV---VLVVAVNTQRPSIGSSKSqdvVIIMRISKNVAILTPLLGLTWGFG 621
Cdd:cd15260  143 DTERCWM--EESSYQWILIVPVVLSLLINLIFlinIVRVLLTKLRATSPNPAP---AGLRKAVRATLILIPLLGLQFLLI 217
                        250       260       270
                 ....*....|....*....|....*....|
gi 296439339 622 IATLIEGTSL--TFHIIFALLNAFQGFFIL 649
Cdd:cd15260  218 PFRPEPGAPLetIYQYVSALLTSLQGLCVA 247
7tmB1_CRF-R2 cd15446
corticotropin-releasing factor receptor 2, member of the class B family of seven-transmembrane ...
404-666 9.66e-10

corticotropin-releasing factor receptor 2, member of the class B family of seven-transmembrane G protein-coupled receptors; The vertebrate corticotropin-releasing factor (CRF) receptors are predominantly expressed in central nervous system with high levels in cortex tissue, brain stem, and pituitary. They have two isoforms as a result of alternative splicing of the same receptor gene: CRF-R1 and CRF-R2, which differ in tissue distribution and ligand binding affinities. Recently, a third CRF receptor (CRF-R3) has been identified in catfish pituitary. The catfish CRF-R1 is highly homologous to CRF-R3. CRF is a 41-amino acid neuropeptide that plays a central role in coordinating neuroendocrine, behavioral, and autonomic responses to stress by acting as the primary neuroregulator of the hypothalamic-pituitary-adrenal axis, which controls the levels of cortisol and other stress related hormones. In addition, the CRF family of neuropeptides also includes structurally related peptides such as mammalian urocortin, fish urotensin I, and frog sauvagine. The actions of CRF and CRF-related peptides are mediated through specific binding to CRF-R1 and CRF-R2. CRF and urocortin 1 bind and activate mammalian CRF-R1 with similar high affinities. By contrast, urocortin 2 and urocortin 3 do not bind to CRF-R1 or stimulate CRF-R1-mediated cAMP formation. Urocortin 1 also shows high affinity for mammalian CRF-R2, whereas CRF has significantly lower affinity for this receptor. These evidence suggest that urocortin 1 is an endogenous ligand for CRF-R1 and CRF-R2. The CRF receptors are members of the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, and parathyroid hormone (PTH). These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on its cellular location and function, CRF receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320562 [Multi-domain]  Cd Length: 264  Bit Score: 59.97  E-value: 9.66e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 404 ITCIGLSVSILSLVLCLIIEATVWSrvvvteISYMRHVCIVNIAVSLLTANV-WFIIGS-HFNIKAQDYNMCVAVTFFSH 481
Cdd:cd15446    7 INYLGHCISVGALVVAFLLFLCLRS------IRCLRNIIHWNLITTFILRNVmWFLLQMiDHNIHESNEVWCRCITTIYN 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 482 FFYLSLFFWMLFKALLIIYGILVIFR--RMMKSRMMVIGFAIGygCPLIIAVTTVaitepeKGYMRPEACWLNWDNTKAL 559
Cdd:cd15446   81 YFVVTNFFWMFVEGCYLHTAIVMTYStdKLRKWVFLFIGWCIP--CPIIVAWAIG------KLYYENEQCWFGKEPGKYI 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 560 -LAFAIPAFVIVAVNLIVVLVVaVNTQRPSIGSSKSQDVVIIMRISKNVAILTPLLGLTWGFGIATLIEG--TSLTFHII 636
Cdd:cd15446  153 dYIYQGPVILVLLINFVFLFNI-VRILMTKLRASTTSETIQYRKAVKATLVLLPLLGITYMLFFVNPGEDdiSQIVFIYF 231
                        250       260       270
                 ....*....|....*....|....*....|
gi 296439339 637 FALLNAFQGFFILLFGTIMDHKIRDALRMR 666
Cdd:cd15446  232 NSFLQSFQGFFVSVFYCFLNGEVRSAARKR 261
GPS pfam01825
GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for ...
347-390 1.65e-09

GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for auto-proteolysis, so is thus named, GPS. The GPS motif is a conserved sequence of ~40 amino acids containing canonical cysteine and tryptophan residues, and is the most highly conserved part of the domain. In most, if not all, cell-adhesion GPCRs these undergo autoproteolysis in the GPS between a conserved aliphatic residue (usually a leucine) and a threonine, serine, or cysteine residue. In higher eukaryotes this motif is found embedded in the C-terminal beta-stranded part of a GAIN domain - GPCR-Autoproteolysis INducing (GAIN). The GAIN-GPS domain adopts a fold in which the GPS motif, at the C-terminus, forms five beta-strands that are tightly integrated into the overall GAIN domain. The GPS motif, evolutionarily conserved from tetrahymena to mammals, is the only extracellular domain shared by all human cell-adhesion GPCRs and PKD proteins, and is the locus of multiple human disease mutations. The GAIN-GPS domain is both necessary and sufficient functionally for autoproteolysis, suggesting an autoproteolytic mechanism whereby the overall GAIN domain fine-tunes the chemical environment in the GPS to catalyze peptide bond hydrolysis. In the cell-adhesion GPCRs and PKD proteins, the GPS motif is always located at the end of their long N-terminal extracellular regions, immediately before the first transmembrane helix of the respective protein.


Pssm-ID: 460350  Cd Length: 44  Bit Score: 53.85  E-value: 1.65e-09
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 296439339  347 AQCVGW---HSKKRRWDEKACQMMLDIRNEVKCRCNYTSvvmSFSIL 390
Cdd:pfam01825   1 PQCVFWdftNSTTGRWSTEGCTTVSLNDTHTVCSCNHLT---SFAVL 44
7tmB2_GPR124-like_Adhesion_III cd15259
orphan GPR124 and related proteins, group III adhesion GPCRs, member of class B2 family of ...
438-665 2.17e-09

orphan GPR124 and related proteins, group III adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; group III adhesion GPCRs include orphan GPR123, GPR124, GPR125, and their closely related proteins. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. GPR123 is predominantly expressed in the CNS including thalamus, brain stem and regions containing large pyramidal cells. GPR124, also known as tumor endothelial marker 5 (TEM5), is highly expressed in tumor vessels and in the vasculature of the developing embryo. GPR124 is essentially required for proper angiogenic sprouting into neural tissue, CNS-specific vascularization, and formation of the blood-brain barrier. GPR124 also interacts with the PDZ domain of DLG1 (discs large homolog 1) through its PDZ-binding motif. Recently, studies of double-knockout mice showed that GPR124 functions as a co-activator of Wnt7a/Wnt7b-dependent beta-catenin signaling in brain endothelium. Furthermore, WNT7-stimulated beta-catenin signaling is regulated by GPR124's intracellular PDZ binding motif and leucine-rich repeats (LRR) in its N-terminal extracellular domain. GPR125 directly interacts with dishevelled (Dvl) via its intracellular C-terminus, and together, GPR125 and Dvl recruit a subset of planar cell polarity (PCP) components into membrane subdomains, a prerequisite for activation of Wnt/PCP signaling. Thus, GPR125 influences the noncanonical WNT/PCP pathway, which does not involve beta-catenin, through interacting with and modulating the distribution of Dvl.


Pssm-ID: 320387 [Multi-domain]  Cd Length: 260  Bit Score: 58.93  E-value: 2.17e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 438 MRHVcIVNIAVSLLTANVWFIIGshfnIKaQDYN--MCVAVTFFSHFFYLSLFFWMLFKALliiygilVIFRRMMKSRMM 515
Cdd:cd15259   39 GRHM-LVNLCLHLLLTCVVFVGG----IN-RTANqlVCQAVGILLHYSTLCTLLWVGVTAR-------NMYKQVTKTAKP 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 516 -------------VIGF-AIGYGCPLIIAVTTVAITEPEkgYMRPEACWLNWDNTkaLLAFAIPAFVIVAVNLIVVLVVA 581
Cdd:cd15259  106 pqdedqpprppkpMLRFyLIGWGIPLIICGITAAVNLDN--YSTYDYCWLAWDPS--LGAFYGPAALIVLVNCIYFLRIY 181
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 582 VNTQRPSiGSSKSQdvviimriSKNVAILTPLLGLTWGFGIATLIEGT--SLTFHIIFALLNAFQGFFILLFGTIMDHKI 659
Cdd:cd15259  182 CQLKGAP-VSFQSQ--------LRGAVITLFLYVAMWACGALAVSQRYflDLVFSCLYGATCSSLGLFVLIHHCLSREDV 252

                 ....*.
gi 296439339 660 RDALRM 665
Cdd:cd15259  253 RQSWRQ 258
7tmB1_PACAP-R1 cd15987
pituitary adenylate cyclase-activating polypeptide type 1 receptor, member of the class B ...
407-669 3.59e-09

pituitary adenylate cyclase-activating polypeptide type 1 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Pituitary adenylate cyclase-activating polypeptide type 1 receptor (PACAP-R1) is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, growth-hormone-releasing hormone (GHRH), and vasoactive intestinal peptide (VIP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. VIP and PACAP exert their effects through three G protein-coupled receptors, PACAP-R1, VIP-R1 (vasoactive intestinal receptor type 1, also known as VPAC1) and VIP-R2 (or VPAC2). PACAP-R1 binds only PACAP with high affinity, whereas VIP-R1 and -R2 specifically bind and respond to both VIP and PACAP. VIP and PACAP and their receptors are widely expressed in the brain and periphery. They are upregulated in neurons and immune cells in responses to CNS injury and/or inflammation and exert potent anti-inflammatory effects, as well as play important roles in the control of circadian rhythms and stress responses, among many others. PACAP-R1 is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level.


Pssm-ID: 320653 [Multi-domain]  Cd Length: 268  Bit Score: 58.44  E-value: 3.59e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 407 IGLSVSILSLVLCLIIEATVwsrvvvTEISYMRHVCIVNIAVSLLTANVWFIIGSHFNIKAQDYNMCV-------AVTFF 479
Cdd:cd15987   10 VGYSTSLVSLTTAMVILCRF------RKLHCTRNFIHMNLFVSFILRAISVFIKDGVLYAEQDSDHCFvstveckAVMVF 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 480 SHFFYLSLFFWMLFKALLIIYGILVIFrrMMKSRMMVIGFAIGYGCPlIIAVTTVAITepeKGYMRPEACWLNWDNTKAL 559
Cdd:cd15987   84 FHYCVMSNYFWLFIEGLYLFTLLVETF--FPERRYFYWYTIIGWGTP-TICVTVWAVL---RLHFDDTGCWDMNDNTALW 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 560 LAFAIPAFVIVAVNLI----VVLVVAVNTQRPSIGSSKSQdvvIIMRISKNVAILTPLLGLTWGFgIATLIEGTSLTFHI 635
Cdd:cd15987  158 WVIKGPVVGSIMINFVlfigIIIILVQKLQSPDIGGNESS---IYLRLARSTLLLIPLFGIHYTV-FAFSPENVSKRERL 233
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 296439339 636 IFAL-LNAFQGFFILLFGTIMDHKIRDALRMRMSS 669
Cdd:cd15987  234 VFELgLGSFQGFVVAVLYCFLNGEVQSEIKRKWRS 268
7tmB2_GPR114 cd15443
orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G ...
401-651 1.74e-07

orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR114 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include GPR56, GPR64, GPR97, GPR112, and GPR126. GPR114 is mainly found in granulocytes (polymorphonuclear leukocytes), and GPR114-transfected cells induced an increase in cAMP levels via coupling to G(s) protein. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320559 [Multi-domain]  Cd Length: 268  Bit Score: 53.22  E-value: 1.74e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 401 LDYITCIGLSVSI----LSLVLCLIIEATvwSRVVVTEISymrhvciVNIAVSLLTANVWFIIGSHFnIKAQDYNMCVAV 476
Cdd:cd15443    4 LTYISIVGCSISAaaslLTILLHFFSRKQ--PKDSTTRIH-------MNLLGSLFLLNGSFLLSPPL-ATSQSTWLCRAA 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 477 TFFSHFFYLSLFFWMLFKA----LLIIYGILVIFRRMMKSRMMVigfaiGYGCPLIIAVTTVAI---------TEPEKGY 543
Cdd:cd15443   74 AALLHYSLLCCLTWMAIEGfhlyLLLVKVYNIYIRRYVLKLCVL-----GWGLPALIVLLVLIFkreaygphtIPTGTGY 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 544 MRPEACWLNWDNTKALLAFAIpAFVIVAVNLiVVLVVAVNTQRpSIGSSKSQDVVIIMRISKNVAILTPLLGLTWGFGIA 623
Cdd:cd15443  149 QNASMCWITSSKVHYVLVLGY-AGLTSLFNL-VVLAWVVRMLR-RLRSRKQELGERARRDWVTVLGLTCLLGTTWALAFF 225
                        250       260
                 ....*....|....*....|....*....
gi 296439339 624 TLieGTSLTFHII-FALLNAFQGFFILLF 651
Cdd:cd15443  226 SF--GVFLIPQLFlFTIINSLYGFFICLW 252
7tmB1_GHRHR2 cd15271
growth-hormone-releasing hormone receptor type 2, member of the class B family of ...
475-667 3.39e-07

growth-hormone-releasing hormone receptor type 2, member of the class B family of seven-transmembrane G protein-coupled receptors; Growth hormone-releasing hormone receptor type 2 (GHRHR2) is found in non-mammalian vertebrates such as chicken and frog. It is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, pituitary adenylate cyclase activating polypeptide (PACAP), vasoactive intestinal peptide, and mammalian growth hormone-releasing hormone. These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. Mammalian GHRHR is a specific receptor for the growth hormone-releasing hormone (GHRH) that controls the synthesis and release of growth hormone (GH) from the anterior pituitary somatotrophs. Mutations in the gene encoding GHRHR have been connected to isolated growth hormone deficiency (IGHD), a short-stature condition caused by deficient production of GH or lack of GH action. Mammalian GHRH is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level. GHRHR is found in mammals as well as zebrafish and chicken, whereas the GHRHR type 2, an ortholog of the GHRHR, has only been identified in ray-finned fish, chicken and Xenopus. Xenopus laevis GHRHR2 has been shown to interact with both endogenous GHRH and PACAP-related peptide (PRP).


Pssm-ID: 320399 [Multi-domain]  Cd Length: 267  Bit Score: 52.43  E-value: 3.39e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 475 AVTFFsHFFYLSLFFWMLFKALLIIYGILVIFRRmmKSRMMVIGFAIGYGCPLIIAVTTVAItepeKGYMRPEACWlnwD 554
Cdd:cd15271   80 AVTFF-QFCVLANFFWLLVEGMYLQTLLLLTFTS--DRKYFWWYILIGWGAPSVTVTVWVLT----RLQYDNRGCW---D 149
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 555 NTKALLAFAI--PAFVIVAVNLIVVL----VVAVNTQRPSIGSSKSQDvviIMRISKNVAILTPLLGLTWGFgIATLIEG 628
Cdd:cd15271  150 DLESRIWWIIktPILLSVFVNFLIFInvirILVQKLKSPDVGGNDTSH---YMRLAKSTLLLIPLFGVHYVV-FAFFPEH 225
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 296439339 629 TSLTFHIIFAL-LNAFQGFFILLFGTIMDHKIRDALRMRM 667
Cdd:cd15271  226 VGVEARLYFELvLGSFQGFIVALLYCFLNGEVQAEIKKRL 265
7tmB1_PTH1R cd15984
parathyroid hormone 1 receptor, member of the class B family of seven-transmembrane G ...
466-648 4.35e-06

parathyroid hormone 1 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; The parathyroid hormone (PTH) receptor family has three subtypes: PTH1R, PTH2R and PTH3R. PTH1R is expressed in bone and kidney and is activated by two polypeptide ligands: PTH, an endocrine hormone that regulates calcium homoeostasis and bone maintenance, and PTH-related peptide (PTHrP), a paracrine factor that regulates endochondral bone development. PTH1R couples predominantly to G(s)-protein that in turn activates adenylate cyclase thereby producing cAMP, but it can also couple to several G protein subtypes, including G(q/11), G(i/o), and G(12/13), resulting in activation of multiple intracellular signaling pathways. PTH1R is found in all vertebrate species, whereas PTH2R is found in mammals and fish, but not in chicken or frog. PTH3R is found in chicken and fish, but it is absent in mammals. The PTH receptors are members of the B1 (or secretin-like) subfamily of class B GPCRs, which include receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), and calcitonin gene-related peptide. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways.


Pssm-ID: 320650 [Multi-domain]  Cd Length: 290  Bit Score: 49.18  E-value: 4.35e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 466 KAQDYNMCVAVTFFSHFFYLSlFFWMLFKALliiYGILVIFRRMMKSRMMVIGFA-IGYGCPLIIavttVAITEPEKGYM 544
Cdd:cd15984   89 KAQFVGCKVAVTFFLYFLATN-YYWILVEGL---YLHSLIFMAFFSEKKYLWGFTlFGWGLPAVF----VTIWASVRATL 160
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 545 RPEACW-LNWDNTKALLAFAIPAFVIVAVNLIVVLVVAVNTQRPSIGSSKSQDVVIIMRISKNVAILTPLLGLTWGFGIA 623
Cdd:cd15984  161 ADTGCWdLSAGNLKWIIQVPILAAIVVNFILFINIVRVLATKLRETNAGRCDTRQQYRKLLKSTLVLMPLFGVHYIVFMA 240
                        170       180
                 ....*....|....*....|....*....
gi 296439339 624 ---TLIEGTSLTFHIIFALL-NAFQGFFI 648
Cdd:cd15984  241 mpyTEVSGILWQVQMHYEMLfNSFQGFFV 269
7tmB1_NPR_B7_insect-like cd15273
insect neuropeptide receptor subgroup B7 and related proteins, member of the class B family of ...
451-669 6.09e-06

insect neuropeptide receptor subgroup B7 and related proteins, member of the class B family of seven-transmembrane G protein-coupled receptors; This subgroup includes a neuropeptide receptor found in Nilaparvata lugens (brown planthopper) and its closely related proteins from invertebrates. They belong to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. The class B GPCRs have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi, or prokaryotes.


Pssm-ID: 320401 [Multi-domain]  Cd Length: 285  Bit Score: 48.52  E-value: 6.09e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 451 LTANVWFIIGSHFNIKAQDYNM--CVAVTFFSHFFYLSLFFWMLFKALliiYGILVIFRRMMKSRMMVIGF-AIGYGCPL 527
Cdd:cd15273   67 LLADIVERNGGGNEVIANIGSNwvCKAITSLWQYFIIANYSWILMEGL---YLHNLIFLALFSDENNIILYiLLGWGLPL 143
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 528 IIAVTTVAITEPEKGYMrpeaCWLNWDNTKALLAFAIPAFVIVAVNLIVVLVVAVnTQRPSIGSSKSQDVVIIMRISKNV 607
Cdd:cd15273  144 IFVVPWIVARILFENSL----CWTTNSNLLNFLIIRIPIMISVLINFILFLNIVR-VLLVKLRSSVNEDSRRYKKWAKST 218
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 296439339 608 AILTPLLGLTWG-FGIATLIEGTSLTFHIIF----ALLNAFQGFFILLFGTIMDHKIRDALRMRMSS 669
Cdd:cd15273  219 LVLVPLFGVHYTiFLILSYLDDTNEAVELIWlfcdQLFASFQGFFVALLYCFLNGEVRAEIQRKWRR 285
7tmB1_PDFR cd15261
The pigment dispersing factor receptor, member of the class B seven-transmembrane G ...
403-650 1.60e-04

The pigment dispersing factor receptor, member of the class B seven-transmembrane G protein-coupled receptors; The pigment dispersing factor receptor (PDFR) is a G protein-coupled receptor that binds the circadian clock neuropeptide PDF, a functional ortholog of the mammalian vasoactive intestinal peptide (VIP), on the pacemaker neurons. The PDFR is implicated in regulating flight circuit development and in modulating acute flight In Drosophila melanogaster. The PDFR activation stimulates adenylate cyclase, thereby increasing cAMP levels in many different pacemakers, and the receptor signaling has been shown to regulate behavioral circadian rhythms and geotaxis in Drosophila. The PDFR belongs to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. . These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. They play key roles in hormone homeostasis in mammals and are promising drug targets in various human diseases including diabetes, osteoporosis, obesity, neurodegenerative conditions (Alzheimer###s and Parkinson's), cardiovascular disease, migraine, and psychiatric disorders (anxiety, depression).


Pssm-ID: 320389 [Multi-domain]  Cd Length: 282  Bit Score: 44.28  E-value: 1.60e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 403 YITCIGLSVSILSLVLCLIIEATVWS------------------RVVVTEISYMRHVCIVNIAVSLLTANVWFIIGSHFN 464
Cdd:cd15261    6 TLEIVGLCLSLVSLIISLFIFSYFRTlrnhrtrihknlflaillQVIIRLVLYIDQAITRSRGSHTNAATTEGRTINSTP 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 465 IkaqdynMCVAVTFFSHFFYLSLFFWMLFKALLIIYGILVIFRRmmKSRMMVIGFAIGYGCPLII----AVTTVAitepe 540
Cdd:cd15261   86 I------LCEGFYVLLEYAKTVMFMWMFIEGLYLHNIIVVSVFS--GKPNYLFYYILGWGIPIVHtsawAIVTLI----- 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 541 kgYMRPEACWLNWDNTKALLAFAIPAFVIVAVNL------IVVLVVAVNtqrpsigSSKSQDVVIIMRISKNVAILTPLL 614
Cdd:cd15261  153 --KMKVNRCWFGYYLTPYYWILEGPRLAVILINLffllniIRVLVSKLR-------ESHSREIEQVRKAVKAAIVLLPLL 223
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 296439339 615 GLTwgfGIATLIEGTSLTFHIIFAL-------LNAFQGFFILL 650
Cdd:cd15261  224 GIT---NILQMIPPPLTSVIVGFAVwsysthfLTSFQGFFVAL 263
7tmB1_GHRHR cd15270
growth-hormone-releasing hormone receptor, member of the class B family of seven-transmembrane ...
473-666 1.74e-04

growth-hormone-releasing hormone receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Growth hormone-releasing hormone receptor (GHRHR) is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, pituitary adenylate cyclase activating polypeptide (PACAP), and vasoactive intestinal peptide. These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. GHRHR is a specific receptor for the growth hormone-releasing hormone (GHRH) that controls the synthesis and release of growth hormone (GH) from the anterior pituitary somatotrophs. Mutations in the gene encoding GHRHR have been connected to isolated growth hormone deficiency (IGHD), a short-stature condition caused by deficient production of GH or lack of GH action. GHRH is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level. GHRHR is found in mammals as well as zebrafish and chicken, whereas the GHRHR type 2, an ortholog of the GHRHR, has only been identified in ray-finned fish, chicken and Xenopus. Xenopus laevis GHRHR2 has been shown to interact with both endogenous GHRH and PACAP-related peptide (PRP).


Pssm-ID: 320398 [Multi-domain]  Cd Length: 268  Bit Score: 44.02  E-value: 1.74e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 473 CVAVTFFSHFFYLSLFFWMLFKALLIIYGILVIFRRmmkSRMMVIGFAI-GYGCPLIIAVTTVAitepEKGYMRPEACW- 550
Cdd:cd15270   77 CKVSVVFCHYCVMTNFFWLLVEAVYLNCLLASSFPR---GKRYFWWLVLlGWGLPTLCTGTWIL----CKLYFEDTECWd 149
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 551 LNWDN-----TKALLAFAIPAFVIVAVNLIVVLVVAVNTQRPSIGSSKSqdvviIMRISKNVAILTPLLG---LTWGFgi 622
Cdd:cd15270  150 INNDSpywwiIKGPIVISVGVNFLLFLNIIRILLKKLDPRQINFNNSAQ-----YRRLSKSTLLLIPLFGthyIIFNF-- 222
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 296439339 623 atLIEGTSLTFHIIFAL-LNAFQGFFILLFGTIMDHKIRDALRMR 666
Cdd:cd15270  223 --LPDYAGLGIRLYLELcLGSFQGFIVAVLYCFLNQEVQTEISRK 265
7tmB1_GLP2R cd15266
glucagon-like peptide-2 receptor, member of the class B family of seven-transmembrane G ...
471-666 1.79e-04

glucagon-like peptide-2 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Glucagon-like peptide-2 receptor (GLP2R) is a member of the glucagon receptor family of G protein-coupled receptors, which also includes glucagon receptor (GCGR) and GLP1R. GLP2R is activated by glucagon-like peptide 2, which is derived from the large proglucagon precursor. Activation of GLP1R stimulates glucose-dependent insulin secretion from pancreatic beta cells, whereas activation of GLP2R stimulates intestinal epithelial proliferation and increases villus height in the small intestine. GCGR regulates blood glucose levels by control of hepatic glycogenolysis and gluconeogenesis and by regulation of insulin secretion from the pancreatic beta-cells. GLP2R belongs to the B1 (or secretin-like) subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on their cellular location, GCGR and GLP receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320394 [Multi-domain]  Cd Length: 280  Bit Score: 43.97  E-value: 1.79e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 471 NMCVAVTFFSHFFYLSLFFWMLFKALLiIYGILVIF----RRMMKSRMMvigfaIGYGCPLIIaVTTVAITepeKGYMRP 546
Cdd:cd15266   85 TSCRVAQVFMHYFVGANYFWLLVEGLY-LHTLLVTAvlseRRLLKKYML-----IGWGTPVLF-VVPWGVA---KILLEN 154
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 547 EACWLNWDNTKALLAFAIPAFVIVAVNLIV------VLVVAVNTQRPSIGSSKsqdvviiMRISKNVAILTPLLG---LT 617
Cdd:cd15266  155 TGCWGRNENMGIWWIIRGPILLCITVNFYIflkilkLLLSKLKAQQMRFTDYK-------YRLARSTLVLIPLLGiheVV 227
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 296439339 618 WGFGIATLIEGTSLTFHIIFAL-LNAFQGFFILLFGTIMDHKIRDALRMR 666
Cdd:cd15266  228 FSFITDEQVEGFSRHIRLFIQLtLSSFQGFLVAVLYCFANGEVKAELKKR 277
7tmB1_VIP-R2 cd15986
vasoactive intestinal polypeptide (VIP) receptor 2, member of the class B family of ...
473-669 6.55e-04

vasoactive intestinal polypeptide (VIP) receptor 2, member of the class B family of seven-transmembrane G protein-coupled receptors; Vasoactive intestinal peptide (VIP) receptor 2 is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, growth-hormone-releasing hormone (GHRH), and pituitary adenylate cyclase activating polypeptide (PACAP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. VIP and PACAP exert their effects through three G protein-coupled receptors, PACAP-R1, VIP-R1 (vasoactive intestinal receptor type 1, also known as VPAC1) and VIP-R2 (or VPAC2). PACAP-R1 binds only PACAP with high affinity, whereas VIP-R1 and -R2 specifically bind and respond to both VIP and PACAP. VIP and PACAP and their receptors are widely expressed in the brain and periphery. They are upregulated in neurons and immune cells in responses to CNS injury and/or inflammation and exert potent anti-inflammatory effects, as well as play important roles in the control of circadian rhythms and stress responses, among many others. VIP-R1 is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level. However, depending on its cellular location, VIP-R1 is also capable of coupling to additional G proteins such as G(q) protein, thus leading to the activation of phospholipase C and intracellular calcium influx.


Pssm-ID: 320652 [Multi-domain]  Cd Length: 269  Bit Score: 42.10  E-value: 6.55e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 473 CVAVTFFSHFFYLSLFFWMLFKALLIIYGILVIFRrmmKSRMMVIGFAIGYGCPLIIAVTTVAitepEKGYMRPEACWLN 552
Cdd:cd15986   79 CKVSLVILQYCIMANFYWLLVEGLYLHTLLVVIFS---ENRHFIVYLLIGWGIPTVFIIAWIV----ARIYLEDTGCWDT 151
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 553 WDNTKALLAFAIPAFVIVAVNLIVVL-VVAVNTQR---PSI-GSSKSQdvviIMRISKNVAILTPLLGLTWgFGIATLIE 627
Cdd:cd15986  152 NDHSVPWWVIRIPIIISIILNFILFIsIIRILLQKlrsPDVgGNDQSQ----YKRLAKSTLLLIPLFGVHY-IVFVYFPD 226
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|...
gi 296439339 628 GTSLTFHIIFAL-LNAFQGFFILLFGTIMDHKIRDALRMRMSS 669
Cdd:cd15986  227 SSSSNYQIFFELcLGSFQGLVVAILYCFLNSEVQGELKRKWRS 269
7tmB1_VIP-R1 cd15269
vasoactive intestinal polypeptide (VIP) receptor 1, member of the class B family of ...
473-666 3.55e-03

vasoactive intestinal polypeptide (VIP) receptor 1, member of the class B family of seven-transmembrane G protein-coupled receptors; Vasoactive intestinal peptide (VIP) receptor 1 is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, growth-hormone-releasing hormone (GHRH), and pituitary adenylate cyclase activating polypeptide (PACAP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. VIP and PACAP exert their effects through three G protein-coupled receptors, PACAP-R1, VIP-R1 (vasoactive intestinal receptor type 1, also known as VPAC1) and VIP-R2 (or VPAC2). PACAP-R1 binds only PACAP with high affinity, whereas VIP-R1 and -R2 specifically bind and respond to both VIP and PACAP. VIP and PACAP and their receptors are widely expressed in the brain and periphery. They are upregulated in neurons and immune cells in responses to CNS injury and/or inflammation and exert potent anti-inflammatory effects, as well as play important roles in the control of circadian rhythms and stress responses, among many others. VIP-R1 is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level. However, depending on its cellular location, VIP-R1 is also capable of coupling to additional G proteins such as G(q) protein, thus leading to the activation of phospholipase C and intracellular calcium influx.


Pssm-ID: 320397 [Multi-domain]  Cd Length: 268  Bit Score: 39.84  E-value: 3.55e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 473 CVAVTFFSHFFYLSLFFWMLFKALLiIYGILVIfrRMMKSRMMVIGFA-IGYGCPLI-IAVTTVAitepeKGYMRPEACW 550
Cdd:cd15269   77 CKAAMVFFQYCIMANFFWLLVEGLY-LHTLLAV--SFFSERKYFWWYIlIGWGAPSVfITAWSVA-----RIYFEDVGCW 148
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 551 LNWDNTKALLAFAIPAFVIVAVNLIV-VLVVAVNTQR---PSIGSSKSQDVViimRISKNVAILTPLLGLTWgFGIATLI 626
Cdd:cd15269  149 DTIIESLLWWIIKTPILVSILVNFILfICIIRILVQKlhsPDIGRNESSQYS---RLAKSTLLLIPLFGIHY-IMFAFFP 224
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 296439339 627 EGTSLTFHIIFAL-LNAFQGFFILLFGTIMDHKIRDALRMR 666
Cdd:cd15269  225 DNFKAEVKLVFELiLGSFQGFVVAVLYCFLNGEVQAELKRK 265
7tmB1_GLP1R cd15268
glucagon-like peptide-1 receptor, member of the class B family of seven-transmembrane G ...
465-664 3.72e-03

glucagon-like peptide-1 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Glucagon-like peptide-1 receptor (GLP1R) is a member of the glucagon receptor family of G protein-coupled receptors, which also includes glucagon receptor and GLP2R. GLP1R is activated by glucagon-like peptide 1 (GLP1), which is derived from the large proglucagon precursor. Activation of GLP1R stimulates glucose-dependent insulin secretion from pancreatic beta cells, whereas activation of GLP2R stimulates intestinal epithelial proliferation and increases villus height in the small intestine. GCGR regulates blood glucose levels by control of hepatic glycogenolysis and gluconeogenesis and by regulation of insulin secretion from the pancreatic beta-cells. Receptors in this group belong to the B1 (or secretin-like) subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on their cellular location, GCGR and GLP receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 341342 [Multi-domain]  Cd Length: 279  Bit Score: 39.94  E-value: 3.72e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 465 IKAQDYNMCVAVTFFSHFFYLSLFFWMLFKALLIIygILVIFRRMMKSRMMVIGFAIGYGCPLIIAVTTVAItepeKGYM 544
Cdd:cd15268   78 LSYQDSLSCRLVFLLMQYCVAANYYWLLVEGVYLY--TLLAFSVFSEQRIFRLYLSIGWGVPLLFVIPWGIV----KYLY 151
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 296439339 545 RPEACWLNWDNTKALLAFAIPAFVIVAVN-LIVVLVVAVNTQRPSIGSSKSQDvvIIMRISKNVAILTPLLG---LTWGF 620
Cdd:cd15268  152 EDEGCWTRNSNMNYWLIIRLPILFAIGVNfLIFIRVICIVVSKLKANLMCKTD--IKCRLAKSTLTLIPLLGtheVIFAF 229
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 296439339 621 GIATLIEGTsLTFHIIFALLN--AFQGFFILLFGTIMDHKIRDALR 664
Cdd:cd15268  230 VMDEHARGT-LRFVKLFTELSftSFQGLMVAILYCFVNNEVQMEFR 274
GPS smart00303
G-protein-coupled receptor proteolytic site domain; Present in latrophilin/CL-1, sea urchin ...
346-393 9.05e-03

G-protein-coupled receptor proteolytic site domain; Present in latrophilin/CL-1, sea urchin REJ and polycystin.


Pssm-ID: 197639  Cd Length: 49  Bit Score: 34.67  E-value: 9.05e-03
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....*...
gi 296439339   346 RAQCVGWHSKKRRWDEKACQMMLDIRNEVKCRCNYTSvvmSFSILMSS 393
Cdd:smart00303   2 NPICVFWDESSGEWSTRGCELLETNGTHTTCSCNHLT---TFAVLMDV 46
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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