|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-347 |
4.25e-166 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 466.63 E-value: 4.25e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 1 MNPMTLSIIMSTLFSGTMITMFSSHWLLIWTGLEINMFTMIPILMLKRNPRSTEAATKYFLMQATASMLLMMGVMINLMY 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 81 SGQWTIMKIFNQPASYIITISIAMKLGLAPFHFWVPEVSQGTSLLSGTILLTWQKLAPISILHQITTSIDTTLLLTMAVL 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 161 SIAIGGWGGLNQTQLRKIMAYSSIAHMGWMMAIIIYNPTLMILNLTIYLLMTTSMFLLFIQQLSTTTLALTHTWNTMPFL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 241 TILTTTTLLSMGGLPPLSGFLPKWMIIQEMTKNDLITLPTAMAVMALLNLYFYMRLVYSTSLTLFPSINNTKTKWQFKPT 320
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFENT 320
|
330 340
....*....|....*....|....*..
gi 1682081789 321 TPPPLMPTLIILSTMAIPLSPMLYILE 347
Cdd:MTH00105 321 KPMTLLPTLIILSTMLLPLTPMLSILE 347
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-343 |
6.87e-117 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 341.78 E-value: 6.87e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 1 MNPMTLSIIMSTLFSGTMITMFSSHWLLIWTGLEINMFTMIPILMLKRNPRSTEAATKYFLMQATASMLLMMGVMINLMY 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 81 SGQWTIMKIFNQPASYIITISIAMKLGLAPFHFWVPEVSQGTSLLSGTILLTWQKLAPISILHQITTSiDTTLLLTMAVL 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 161 SIAIGGWGGLNQTQLRKIMAYSSIAHMGWMMAIIIYNPTLMILNLTIYLLMTTSMFLLFIQQLSTTTLALTHTWNTMPFL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 241 TILTTTTLLSMGGLPPLSGFLPKWMIIQEMTKNDLITLPTAMAVMALLNLYFYMRLVYSTSLTLFPSINNTKTKWQFKPT 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|...
gi 1682081789 321 TPPPLMPTLIILSTMAIPLSPML 343
Cdd:MTH00135 320 QLTLPLAISTTATLMLLPLTPAI 342
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-344 |
1.04e-113 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 333.71 E-value: 1.04e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 1 MNPMTLSIIMSTLFSGTMITMFSSHWLLIWTGLEINMFTMIPILMLKRNPRSTEAATKYFLMQATASMLLMMGVMINLMY 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 81 SGQWTIMKIFNQPASYIITISIAMKLGLAPFHFWVPEVSQGTSLLSGTILLTWQKLAPISILHQITTSIDTTLLLTMAVL 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 161 SIAIGGWGGLNQTQLRKIMAYSSIAHMGWMMAIIIYNPTLMILNLTIYLLMTTSMFLLFIQQLSTTTLALTHTWNTMPFL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 241 TILTTTTLLSMGGLPPLSGFLPKWMIIQEMTKNDLITLPTAMAVMALLNLYFYMRLVYSTSLTLFPSINNTKTKWQFKpT 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTK-P 319
|
330 340
....*....|....*....|....
gi 1682081789 321 TPPPLMPTLIILSTMAIPLSPMLY 344
Cdd:MTH00112 320 KKNTLTATLTTLSTLLLPLSPMIL 343
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
2.37e-111 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 327.65 E-value: 2.37e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 1 MNPMTLSIIMSTLFSGTMITMFSSHWLLIWTGLEINMFTMIPILMLKRNPRSTEAATKYFLMQATASMLLMMGVMINLMY 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 81 SGQWTIMKIFNQPASYIITISIAMKLGLAPFHFWVPEVSQGTSLLSGTILLTWQKLAPISILHQITTSIDTTLLLTMAVL 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 161 SIAIGGWGGLNQTQLRKIMAYSSIAHMGWMMAIIIYNPTLMILNLTIYLLMTTSMFLLFIQQLSTTTLALTHTWNTMPFL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 241 TILTTTTLLSMGGLPPLSGFLPKWMIIQEMTKNDLITLPTAMAVMALLNLYFYMRLVYSTSLTLFPSINNTKTKWQFKpT 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFK-N 319
|
330 340
....*....|....*....|....*.
gi 1682081789 321 TPPPLMPTLIILSTMAIPLSPMLYIL 346
Cdd:MTH00070 320 KTNNLLSLTIILSLMLLPITPTILNL 345
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-306 |
8.41e-83 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 255.24 E-value: 8.41e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 1 MNPMTLSIIMSTLFSGTMITMFSSHWLLIWTGLEINMFTMIPILMLKRNPRSTEAATKYFLMQATASMLLMMGVMINLMY 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 81 SGQWTIMKIFNQPASYIITISIAMKLGLAPFHFWVPEVSQGTSLLSGTILLTWQKLAPISILHQITTSIDTTLLLTMAVL 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 161 SIAIGGWGGLNQTQLRKIMAYSSIAHMGWMMAIIIYNPTLMILNLTIYLLMTTSMFLLFIqQLSTTTLA-LTHTWNTMPF 239
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGN-NFSLSTLShLNKLSQLNPI 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1682081789 240 LTILTTTTLLSMGGLPPLSGFLPKWMIIQEMTKNDLITLPTAMAVMALLNLYFYMRLVYSTSLTLFP 306
Cdd:MTH00041 240 SAFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFP 306
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
4.00e-78 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 242.95 E-value: 4.00e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 1 MNPMTLSIIMSTLFSGTMITMFSSHWLLIWTGLEINMFTMIPILMLKRNPRSTEAATKYFLMQATASMLLMMGVMINLMY 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 81 SGQWTIMKIFNQPASYIITISIAMKLGLAPFHFWVPEVSQGTSLLSGTILLTWQKLAPISILHQITTSIDTTLLLTMAVL 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 161 SIAIGGWGGLNQTQLRKIMAYSSIAHMGWMMAIIIYNPTLMILNLTIYLLMTTSMFLLFIQQLSTTTLALTHTWNTMPFL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 241 TILTTTTLLSMGGLPPLSGFLPKWMIIQEMTKNDLITLPTAMAVMALLNLYFYMRLVYSTSLTLFPSINNTKTKWQfKPT 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWR-TKS 319
|
330 340
....*....|....*....|....*.
gi 1682081789 321 TPPPLMPTLIILSTMAIPLSPMLYIL 346
Cdd:MTH00200 320 NSNLLVGLLLLLSILGLPLTPQLLFL 345
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
10-332 |
1.86e-51 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 173.53 E-value: 1.86e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 10 MSTLFSGTMITMFSSHWLLIWTGLEINMFTMIPILMLKRNPRSTEAATKYFLMQATASMLLMMGVMINLMYSGQWTIMki 89
Cdd:MTH00144 10 LFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSWFSM-- 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 90 fnqpasYIITISIAMKLGLAPFHFWVPEVSQGTSLLSGTILLTWQKLAPISILHQITTSIDT-TLLLTMAVLSIAIGGWG 168
Cdd:MTH00144 88 ------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLaYLLCVISVLSALVGSIG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 169 GLNQTQLRKIMAYSSIAHMGWMMAIIIYNPTLMILNLTIYLLMTTSMFLLFIQQLSTTTLALTHTwNTMPFLTILTTTTL 248
Cdd:MTH00144 162 GLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSL-KPSYKTGLSIISLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 249 LSMGGLPPLSGFLPKWMIIQEMTKNDLITLPTAMAVMALLNLYFYMRLVYSTSLTLFPSINNTKTKWQFKPTTPPPLMPT 328
Cdd:MTH00144 241 LSLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYLSVFFSSFLSSSKSKKSNSSKVLNSSIISLNLLGG 320
|
....
gi 1682081789 329 LIIL 332
Cdd:MTH00144 321 LLFL 324
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
2.07e-51 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 173.47 E-value: 2.07e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 1 MNPMTLSIIMSTLFSGTMITMFSSHWLLIWTGLEINMFTMIPILMLKRNPRSTEAATKYFLMQATASMLLMMGVMINLMy 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 81 sgqwtIMKIFNQPASYIITISIAMKLGLAPFHFWVPEVSQGTSLLSGTILLTWQKLAPISILHQITTSidtTLLLTMAVL 160
Cdd:MTH00160 81 -----NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLINN---NFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 161 SIAIGGWGGLNQTQLRKIMAYSSIAHMGWMMAIIIYNPTLMILNLTIYLLMTTSMFLLFIQQLSTTTLALTHTWNTMPFL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 241 TILTTTTLLSMGGLPPLSGFLPKWMIIQEMTKNDLITLPTAMAVMALLNLYFYMRLVYStslTLFPSINNTKTKWQFKPT 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYS---SLMLNYNKNKWNLKKKKN 309
|
330 340
....*....|....*....|....*.
gi 1682081789 321 TPPPLMPTLIILSTMAIPLSPMLYIL 346
Cdd:MTH00160 310 KFSLILNFLSFISLFGLILSSLLFLL 335
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
5-299 |
2.62e-49 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 168.03 E-value: 2.62e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 5 TLSIIMSTLFSGTMITMFSSHWLLIWTGLEINMFTMIPILMLKRNPRSTEAATKYFLMQATASMLLMMGVMINLMYSGQW 84
Cdd:MTH00011 7 TMFLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGMTMMWSFPSLL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 85 TImkifnqPASYIITISIAMKLGLAPFHFWVPEVSQGTSLLSGTILLTWQKLAPISILHQITTSIDTTLLLTMAVLSIAI 164
Cdd:MTH00011 87 KN------ITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 165 GGWGGLNQTQLRKIMAYSSIAHMGWMMAIIIYNPTLMILNLTIYLLMTTSMFLLFIQQLSTTTLALTHTWNTMPFLTILT 244
Cdd:MTH00011 161 GGLGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSL 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1682081789 245 TTTLLSMGGLPPLSGFLPKWMIIQEMTKNDLITLPTAMAVMALLNLYFYMRLVYS 299
Cdd:MTH00011 241 FIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFN 295
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
7-300 |
3.83e-41 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 146.36 E-value: 3.83e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 7 SIIMSTLFSGTMITMFSSHWLLIWTGLEINMFTMIPILMLKRNPRSTEAATKYFLMQATASMLLMMGVMinLMYSGQWti 86
Cdd:MTH00197 1 FLFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGS--LSFSNLY-- 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 87 mkiFNQPASYIITISIAMKLGLAPFHFWVPEVSQGTSLLSGTILLTWQKLAPISILHQITTSIDttLLLTMAVLSIAIGG 166
Cdd:MTH00197 77 ---LSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFNSSSFM--GLLICSVLSSLIGG 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 167 WGGLNQTQLRKIMAYSSIAHMGWMMAIIIYNPTLMILNLTIYLLMTTSMFLLFIQQLSTTTLALTHTWNTMPFLTILTTT 246
Cdd:MTH00197 152 IGGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGL 231
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 1682081789 247 TLLSMGGLPPLSGFLPKWMIIQEMTKNDLITLPTAMAVMALLNLYFYMRLVYST 300
Cdd:MTH00197 232 SFLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKS 285
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
8-298 |
1.21e-32 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 126.38 E-value: 1.21e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 8 IIMSTLfsGTMITMFSSHWLLIWTGLEINMFTM-IPILMLKRNPRSTEAATKYFLMQATASMLLMMGVMINLMYSGQWTI 86
Cdd:COG1007 108 LLFATL--GMMLMASANDLLTLFLGLELLSLSLyVLVAFRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNL 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 87 MKI--------FNQPASYI----ITISIAMKLGLAPFHFWVPEVSQGTSLLSGTILLTWQKLAPISILHQITTSID---- 150
Cdd:COG1007 186 AGIaaalaaggANSPLLLLglvlVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLLVEAFpgla 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 151 ---TTLLLTMAVLSIAIGGWGGLNQTQLRKIMAYSSIAHMGWMMAIIIYNPTL----MILNLTIYLLMTTSMFLlFIQQL 223
Cdd:COG1007 266 adwQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLgvsaALFYLLAYLFMNLGAFA-VILLL 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 224 STTTLALTHT------WNTMPFLTILTTTTLLSMGGLPPLSGFLPKWMIIQEMTKNDLITLPTAMAVMALLNLYFYMRLV 297
Cdd:COG1007 345 SRKGGEAEEIedlaglARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVISAYYYLRVV 424
|
.
gi 1682081789 298 Y 298
Cdd:COG1007 425 K 425
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
12-297 |
6.24e-28 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 113.38 E-value: 6.24e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 12 TLFS--GTMITMFSSHWLLIWTGLEIN---MFTMIPilMLKRNPRSTEAATKYFLMQATASMLLMMGVMINLMYSGQWTI 86
Cdd:PRK05777 109 VLFAllGMMVMVSANDLLTLFLGLELLslpLYALAA--LRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSF 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 87 MKIFNQPASYI------------ITISIAMKLGLAPFHFWVPEVSQGTSLLSGTILLTWQKLAPISILHQITTSIDTTL- 153
Cdd:PRK05777 187 AGIAKALADGSgnsllllfglvfLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLRLLVVAFGGLs 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 154 ------LLTMAVLSIAIGGWGGLNQTQLRKIMAYSSIAHMGWMMAIIIYNPTL----MILNLTIYLLMTTSMFlLFIQQL 223
Cdd:PRK05777 267 edwqqvLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEgysaVLFYLLAYLFMTLGAF-GVISLL 345
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 224 STTTLALTH--TWN----TMPFLTILTTTTLLSMGGLPPLSGFLPKWMIIQEMTKNDLITLPTAMAVMALLNLYFYMRLV 297
Cdd:PRK05777 346 RRKGGEAESisDFAglskRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRVI 425
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
16-297 |
2.58e-27 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 111.58 E-value: 2.58e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 16 GTMITMFSSHWLLIWTGLEINMFTM-IPILMLKRNPRSTEAATKYFLMQATASMLLMMGVMINLMYSGQWTIMKIFNQPA 94
Cdd:TIGR01770 114 GIFLLVSSNDLLSIYLGLELQSLCFyVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLS 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 95 SYIITIS------------IAMKLGLAPFHFWVPEVSQGTSLLSGTILLTWQKLAPISILHQITTSIDTT-------LLL 155
Cdd:TIGR01770 194 NGMLNISllllgivlilvgLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYILFGfseawqiFLA 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 156 TMAVLSIAIGGWGGLNQTQLRKIMAYSSIAHMGW-MMAIIIYNPTLM---ILNLTIYLLMTTSMFLLFIqQLSTTTLALT 231
Cdd:TIGR01770 274 IIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYiLIGLLAGTLEGIkavLFYIFIYALMSLGAFGVLS-LLRSYKDEWI 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1682081789 232 HTWNTM-------PFLTILTTTTLLSMGGLPPLSGFLPKWMIIQEMTKNDLITLPTAMAVMALLNLYFYMRLV 297
Cdd:TIGR01770 353 EYISDFaglfktnPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLRVV 425
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
16-267 |
5.69e-26 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 107.80 E-value: 5.69e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 16 GTMITMFSSHWLLIWTGLEINMFTMIPILMLKRNP-RSTEAATKYFLMQATASMLLMMGVMINLMYSGQWTIMKI----F 90
Cdd:MTH00199 109 GSLLLVSSINWLSIYLAIELQTLTLFILVALKRDSaYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIQGInsilT 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 91 NQPASYIITISIAMKLGLAPFHFWVPEVSQGTSLLSGTILLTWQKLAPISILHQIttSIDTTLLLTMAVLSIAIGGWGGL 170
Cdd:MTH00199 189 GDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQI--GPVTNVVLICAVLSIIYGAIGAL 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 171 NQTQLRKIMAYSSIAHMGWMM------------AIIIYnptlmilnLTIYLLMTTSMFLLFIQQLSTTTL--ALTHTWNT 236
Cdd:MTH00199 267 NQTKIKRLLAYSGIGHMGFILfgvaigsfesiqASLIY--------MIIYVIMSICSFSIILSLKLTKGLivEVSGLSRK 338
|
250 260 270
....*....|....*....|....*....|.
gi 1682081789 237 MPFLTILTTTTLLSMGGLPPLSGFLPKWMII 267
Cdd:MTH00199 339 NPVIALTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-281 |
6.92e-25 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 102.01 E-value: 6.92e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 23 SSHWLLIWTGLEINMFTMIP-ILMLKRNPRSTEAATKYFLMQATASMLLMMGVMINLMYSGQWTIMKIFNQP-------- 93
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLlIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALtgglnssg 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 94 ---ASYIITISIAMKLGLAPFHFWVPEVSQGTSLLSGTILL-TWQKLAPISI-----LHQITTSIDTTLLLTMAVLSIAI 164
Cdd:pfam00361 81 lllLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAaTLVKAGGYGLirrslLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 165 GGWGGLNQTQLRKIMAYSSIAHMGWMMAII----IYNPTLMILNLTIYLLMTTSMFLLFI----QQLSTTTLALTHT-WN 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALgagtIYGIQAAIFHLLTHGLFSAGLFLCAGsviyRRVHTRNIRDYGGlAK 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 1682081789 236 TMPFLTILTTTTLLSMGGLPPLSGFLPKWMIIQEMTKNDLITLPTA 281
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLA 286
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
16-297 |
3.63e-24 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 101.65 E-value: 3.63e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 16 GTMITMFSSHWLLIWTGLEINMFTMIPILMLKRNP-RSTEAATKYFLMQATASMLLMMGV-------------MINLMYS 81
Cdd:MTH00196 5 GILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSgYSAEAGLKYFVLGALSSGLFLFGCallcgttgglhlsYINLVLN 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 82 GQWTIMKIFNQPASYIITISIAMKLGLAPFHFWVPEVSQGTSLLSGTILLTWQKLAPISILHQITTSIDttLLLTMAVLS 161
Cdd:MTH00196 85 SGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNVN--ILLIGGLFS 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 162 IAIGGWGGLNQTQLRKIMAYSSIAHMGWMMAIIIYNPTLMI----LNLTIYLLMTTSMF--LLFIQQLSTTTLALTHTWN 235
Cdd:MTH00196 163 LFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIqaslVYLFIYIIMSICVFsiILALNVYKNLIIEFSGLSR 242
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1682081789 236 TMPFLTILTTTTLLSMGGLPPLSGFLPKWMIIQEMTKNDLITLPTAMAVMALLNLYFYMRLV 297
Cdd:MTH00196 243 RLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRIV 304
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
13-301 |
1.10e-21 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 95.21 E-value: 1.10e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 13 LFSGTMITMFSSHWLLIWTGLEINMFTMIPILMLKRNPRSTEAATKYFLMQATASMLLMMGVMINLMYSGQWTI----MK 88
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMadlaAR 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 89 IFNQPASYIITISI------AMKLGLAPFHFWVPEV-----SQGTSLLSGT--------ILLTWQKLAPISILHQITTsi 149
Cdd:COG0651 196 LAELDPGLLLAAFAlllvgfGIKAALFPLHFWLPDAypaapSPVSALLSGLltkvgvyaILRVLTLLFGADPALFLGT-- 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 150 dttLLLTMAVLSIAIGGWGGLNQTQLRKIMAYSSIAHMGWMMAIIIYNPTLMILNLTIYL----LMTTSMFL---LFIQQ 222
Cdd:COG0651 274 ---LLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLlnhaLAKALLFLaagAIERA 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 223 LSTTTLA-LTHTWNTMPFLTILTTTTLLSMGGLPPLSGFLPKWMIIQEMTKNDLITLPTAMAVMALLNLYFYMRLVYSTS 301
Cdd:COG0651 351 TGTRDLDkLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
46-297 |
2.70e-15 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 76.63 E-value: 2.70e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 46 LKRNPRSTEAATKYFLMQATASMLLMMGVmiNLMY--SGQWTIMK------IFNQPASYIITI-----SIAMKLGLAPFH 112
Cdd:PRK02504 153 MKRDPRSNEAALKYLLIGAASSAIFLYGS--SLLYglSGGSTQLSaialalITSPSLGLALALvfviaGIAFKISAVPFH 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 113 FWVPEVSQGTSLLSGTILLTWQKLA----PISILHQITTSIDT---TLLLTMAVLSIAIGGWGGLNQTQLRKIMAYSSIA 185
Cdd:PRK02504 231 QWTPDVYEGSPTPVVAFLSVGSKAAgfalAIRLLVTAFPSFDEqwkLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIG 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 186 HMGWMMAIIIYNP----TLMILNLTIYLLMTTSMFLLFIQ-QLSTTTLALTH---TWNTMPFLTILTTTTLLSMGGLPPL 257
Cdd:PRK02504 311 QAGFVMIGLVAGTeagyASMVFYLLAYLFMNLGAFACVILfSLRTGTDQISDyagLYQKDPLLTLGLSLCLLSLGGIPPL 390
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1682081789 258 SGFLPKWMIIQEMTKNDLITLPTAMAVMALLNLYFYMRLV 297
Cdd:PRK02504 391 AGFFGKIYLFWAGWQAGLYLLVLVGLVTSVISIYYYIRVI 430
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
47-297 |
2.56e-14 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 73.50 E-value: 2.56e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 47 KRNPRSTEAATKYFLMQATASMLLMMGvmINLMYS---GQWTIMKI---------FNQPASYI----ITISIAMKLGLAP 110
Cdd:CHL00049 155 KKDVRSNEATMKYLLMGGASSSILVYG--FSWLYGlsgGEIELQEIvnglintqmYNSPGISIalifITVGIGFKLSLAP 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 111 FHFWVPEVSQG-----------TSLLSGTILLTwqklapiSILHQITTSIDT---TLLLTMAVLSIAIGGWGGLNQTQLR 176
Cdd:CHL00049 233 FHQWTPDVYEGsptpvvaflsvTSKVAASALAT-------RIFDIPFYFSSNewhLLLEILAILSMILGNLIAITQTSMK 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 177 KIMAYSSIAHMGWMM-AIIIYNP----TLMILNLTIYLLMTTSMF---LLFiqQLSTTTLAL---THTWNTMPFLTILTT 245
Cdd:CHL00049 306 RMLAYSSIGQIGYVIiGIIVGDSndgyASMITYMLFYIFMNLGTFaciVLF--GLRTGTDNIrdyAGLYTKDPFLALSLA 383
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1682081789 246 TTLLSMGGLPPLSGFLPKWMIIQEMTKNDLITLPTAMAVMALLNLYFYMRLV 297
Cdd:CHL00049 384 LCLLSLGGIPPLAGFFGKLYLFWCGWQAGLYFLVSIGLLTSVISIYYYLKII 435
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
16-267 |
1.36e-12 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 68.73 E-value: 1.36e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 16 GTMITMFSSHWLLIWTGLEINMFTMIPILMLKRNPRST---------EAATKYFLMQATASMLLMMGVMINLMYSG---- 82
Cdd:MTH00198 200 GGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGnegm 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 83 ---------QWTIMKIFNQPASYI-ITISIAMKLGLAPFHFWVPEVSQGTSLLSGTILLTWQKLAPISILHQITtsIDTT 152
Cdd:MTH00198 280 lgtilsatlETTNIELRQGSLGYLfITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILLTSLV--ITSK 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 153 LLLTMAVLSIAIGGWGGLNQTQLRKIMAYSSIAHMGWMMaIIIYNPTLMILN-----LTIYLLMTTSMFLL------FIQ 221
Cdd:MTH00198 358 LLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFIL-IGVSAGTYESLQaswtyAVTYLVSALASFTVictleeFGT 436
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1682081789 222 QLSTTT---------------LALTHTWNTMPFLTILTTTTLLSMGGLPPLSGFLPKWMII 267
Cdd:MTH00198 437 RTPTSRqrdgsfgnynlvrrlVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFIL 497
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
42-298 |
2.78e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 64.52 E-value: 2.78e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 42 PILMLKRNPRSTEAATKYFLMQATASMLLMMGVMINLMYSGQWTIMKIFNQPAS--------YIITISIAMKLGLAPFHF 113
Cdd:PRK08375 144 ALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALAEnptvvtafGFVLLALALKAAVFPLHT 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 114 WVPEVSQGTS-----LLSGT-----ILLTWQKLAPISILHQITTSIDTTLLLTMAVLSIAIGGWGGLNQTQLRKIMAYSS 183
Cdd:PRK08375 224 WLPRAYPAAPpvvtaLLSGLvtkvaVYALIRIYFTVFGGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYST 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 184 IAHMGWMMAIIIYNPTLMILNLTIYL----LMTTSMFllfiqqLSTTTLALT-HTWN---------TMPFLTILTTTTLL 249
Cdd:PRK08375 304 VSQMGYILLGLALLTPLALAAGLLHLlhhaLMKGALF------LAAGAIEVTyGTRRlselsglgrRMPLTAAAFAVASL 377
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 1682081789 250 SMGGLPPLSGFLPKWMIIQEMTKNDLITLPTAMAVMALLNLYFYMRLVY 298
Cdd:PRK08375 378 SLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWY 426
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
55-267 |
9.06e-10 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 59.71 E-value: 9.06e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 55 AATKYFLMQATASMLLMMGVMINLMYSGQWT--IMKIFNQPASYI--------ITISIAMKLGLAPFHFWVPEV-----S 119
Cdd:COG1008 162 AAIKFFLYTLAGSLLMLVAILALYFLAGALTfdIAELAAAPLPLTaqlllflaFFIAFAVKVPMFPFHTWLPDAhveapT 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 120 QGTSLLSGTIL----------------LTWQKLAPIsilhqittsidttlLLTMAVLSIAIGGWGGLNQTQLRKIMAYSS 183
Cdd:COG1008 242 AGSVLLAGVLLkmggygllrfalplfpEASAYFAPL--------------LAALGVIGIIYGALVALAQTDLKRLIAYSS 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 184 IAHMGwMMAIIIYNPTLMILNLTIYL-----LMTTSMFLL---FIQQLSTTTLA-LTHTWNTMPFLTILTTTTLLSMGGL 254
Cdd:COG1008 308 VSHMG-FVLLGIFALNPLGLQGAVLQmvshgLITAALFLLvgvLYDRTHTRDIAdLGGLAKRMPVLAALFLLAALASLGL 386
|
250
....*....|...
gi 1682081789 255 PPLSGFLPKWMII 267
Cdd:COG1008 387 PGTSGFVGEFLVL 399
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
55-268 |
2.83e-09 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 58.03 E-value: 2.83e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 55 AATKYFLMQATASmLLMMGVMINLMYSGQWT------IMKIFNQPASYI----ITISIAMKLGLAPFHFWVPEV-----S 119
Cdd:TIGR01972 157 AAMKFFLYTLAGS-LLMLLAILGLYFLGGGTfdllelLNLPLPFGVQTWlflaFFIAFAVKVPLFPLHTWLPDAhveapT 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 120 QGTSLLSGTILltwqKLAPISILHQI------TTSIDTTLLLTMAVLSIAIGGWGGLNQTQLRKIMAYSSIAHMGWMMAI 193
Cdd:TIGR01972 236 AGSVILAGVLL----KMGTYGFLRFNlplfpdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLG 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 194 IIYNPTLMILNLTIYL----LMTTSMFLL---FIQQLSTTTLALTH-TWNTMPFLTILTTTTLLSMGGLPPLSGFLPKWM 265
Cdd:TIGR01972 312 IFSFNELGISGAVFQMishgLITAALFLLvgvLYERAHTRDIAKYGgLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFL 391
|
...
gi 1682081789 266 IIQ 268
Cdd:TIGR01972 392 ILL 394
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-300 |
4.13e-09 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 57.85 E-value: 4.13e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 48 RNPRSTEAATKYFLMQATASMLLMMGVMINLMYSGQWTIMKIFNQPA-----SYIITISIAM------KLGLAPFHFWVP 116
Cdd:COG1009 156 EKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPtilssPLLTLILLLLllgafgKSAQFPLHFWLP 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 117 E-------VSqgtSLL-------SGTILLTwqKLAPISILHQITtsidTTLLLTMAVLSIAIGGWGGLNQTQLRKIMAYS 182
Cdd:COG1009 236 DamegptpVS---ALLhaatmvkAGVYLLA--RLSPLFALSPVW----LTVVAIIGAITALFAALIALAQTDIKRVLAYS 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 183 SIAHMGWMMAIIiynpTLMILNLTIYLLMTTSMF--LLFiqqLSTTTLAL-THT---------WNTMPFLTILTTTTLLS 250
Cdd:COG1009 307 TVSQLGYMFLAL----GVGAYVAALFHLLTHAFFkaLLF---LGAGSVIHaTGTrdirkmgglRKKMPITAITFLIGALS 379
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1682081789 251 MGGLPPLSGFLPKWMIIQEMTKNDL--ITLPTAMAVMALLNLYFYMRLVYST 300
Cdd:COG1009 380 LAGIPPFAGFFSKEAILEAALEAGGlgPLLLAVALLGAFLTAFYSFRLFFLV 431
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
14-268 |
2.37e-07 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 52.31 E-value: 2.37e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 14 FSGTMITMFSSHWLLIWTGLEINMF-TMIPILMLKRnpRSTEAATKYFLMQATASMLLMMGVMINLMYSGQWTIMKIFN- 91
Cdd:PRK08668 108 LAGVLGVFLANDLLTLYIFWEIMTFsSFMMVPMGKK--ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADISQg 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 92 --QPAS------YIITISIA--MKLGLAPFHFWVPEVSQG-----TSLLSGT--------ILLTWQKLAPISILHQITTS 148
Cdd:PRK08668 186 liNDTStgfaliVFLFLLAFgvAKAGIFPLHVWAPDAYSEapqsfSAVLSGQlsklgaygFLLVLYVLPGTKLFSEFGTY 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 149 IDTTL----LLTMAVLSIAIGGWGGLNQTQLRKIMAYSSIAHMGW-MMAIIIYNPT------LMILNltiYLLMTTSMFL 217
Cdd:PRK08668 266 RGVPLfnyiLAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYiLVGLGLGTSLgfagglFHVFN---HALFKGLFFL 342
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 1682081789 218 LF---IQQLSTTTLA----LTHTwntMPFLTILTTTTLLSMGGLPPLSGFLPKWMIIQ 268
Cdd:PRK08668 343 IFaavIYRTGTTKISemggLIEK---MPFTFAMYLVAIISLAGIPPMSGFASKWLIFE 397
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
54-266 |
3.92e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 51.64 E-value: 3.92e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 54 EAATKYFLMQATASMLLMMGvmINLMYsGQWTI-------------MKIFNQPASYIITISIAMKLGLAPFHFWVPEvSQ 120
Cdd:PRK08376 172 EAGIKYMFVGSLASSMVLLG--IALLY-GQYGTlnmaylavkmsenPTVVAKIALALFIAGLAMKSGAVPVHMWLPD-AY 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 121 GTSLLSGTILLTWQKLAPISILHQITTSIDTT---------LLLTMAVLSIAIGGWGGLNQTQLRKIMAYSSIAHMGWMM 191
Cdd:PRK08376 248 PAAPSSISAMLLVIKQAGLYALARVLFSIYGPainlatvgwVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYML 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 192 -----AIIIYNPTLM------ILNLTIYLLMTTSMF--LLF------IQQLSTTTL-ALTHTWNTMPFLTILTTTTLLSM 251
Cdd:PRK08376 328 lglgvGLAALGDPAMasygeiALAGGIYHIVNHALYkaLLFltagavIYETGTRNLnELGGLARTMPKTTIAFLIGAAAI 407
|
250
....*....|....*
gi 1682081789 252 GGLPPLSGFLPKWMI 266
Cdd:PRK08376 408 VGLPPFNGFASKWLI 422
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-341 |
5.91e-07 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 45.71 E-value: 5.91e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 1682081789 291 YFYMRLVYSTSLTLFPSINNTKTKWQFKPTTPPPLMPTLIILSTMAIPLSP 341
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTLLLPTLTTLSILLLPLTP 51
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
28-299 |
6.83e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 50.74 E-value: 6.83e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 28 LIWTGLEINMFTMIPILML---------KRNPRSTEAATKYFLMQATASMLLMMGV-----------MINL-----MYSG 82
Cdd:PRK12667 129 ILLTGDAFNLFVMLEVLSIsayglvayyRDRGDAVEAAIKYALIGAVGTTLYFLALaflyatfgtlnMADLsakirGLSF 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 83 QWTIMKIFNQPASYIITISIAM-----KLGLAPFHFWVPEV-----SQGTSLLSG--------TILLTWQKLAPISILHQ 144
Cdd:PRK12667 209 PLTGGLAGNPPLALGVALALALwaftiKAAIFPNHFWLPDAhpaapSPVSAMLSGlvvnvgayAIIRFLYTIFGISPSLI 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 145 ITTSIDTTLLLTMAVLSIAIGGWGGLNQTQLRKIMAYSSIAHMGW-MMAIIIynPTLMILNLTIYLLMTTS-----MFL- 217
Cdd:PRK12667 289 DFRAALSPILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYiFMGIGI--GTQLGLAAALFHIINHAiakslLFLa 366
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 218 --LFIQQLSTTTL-ALTHTWNTMPFLTILTTTTLLSMGGLPPLSGFLPKWMIIQEMTKNDLITLPTAMAVMALLNLYFYM 294
Cdd:PRK12667 367 sgVFIHAAGTRDIdELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYF 446
|
....*
gi 1682081789 295 RLVYS 299
Cdd:PRK12667 447 RAWYS 451
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
110-263 |
9.55e-07 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 50.81 E-value: 9.55e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 110 PFHFWVPEVSQGTSLLS-----------GTILLtwqkLAPISILHQITTSidTTLLLTMAVLSIAIGGWGGLNQTQLRKI 178
Cdd:PRK12650 226 PFHFWLPEAMAAITPVSaflhaaavvkaGIYLL----LRFSPVFHDVAVW--NWLLIIVGMITALMGAVFAVQKTDLKKL 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 179 MAYSSIAHMGWMMAII-IYNP---TLMILNLTIYLLMTTSMFLLF----IQQLSTTTLALTHTWNTMPFLTILTTTTLLS 250
Cdd:PRK12650 300 TAYSTVSQLGWIVATIgVGTPfalTAAVVHTLAHALFKSSLFMLIgvvdHQAGTRDIRRLGSLWRRMPFTFVSVTIAALS 379
|
170
....*....|...
gi 1682081789 251 MGGLPPLSGFLPK 263
Cdd:PRK12650 380 MAAVPPLFGFVSK 392
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
152-296 |
1.35e-06 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 49.95 E-value: 1.35e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 152 TLLLTMAVLSIAIGGWGGLNQTQLRKIMAYSSIAHMGWMMA------------IIIYNPTLMILNLTIYLLMTTSMFLLF 219
Cdd:PRK12663 273 PLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLglalgtpagingAIFYLVHDMVVKTALFLIAGSLVRLTG 352
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1682081789 220 IQQLSTttlaLTHTWNTMPFLTILTTTTLLSMGGLPPLSGFLPKWMIIQEMTKNDLITLPTAMAVMALLNLYFYMRL 296
Cdd:PRK12663 353 YRSLQY----LGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSLFRI 425
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-194 |
1.02e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 47.06 E-value: 1.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 13 LFSGTMITMFSSHWLLIWTGLEINMF---TMIPILMLKRNprsTEAATKYFLMQATASMLLMMGVMINLMYSGQ------ 83
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVfsaMLIAILSAREN---IDAALKYIFIASTAMIFAFIGLIFLFSLTRQalgtgt 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 84 --WTIMKIFNQ--------PASYIITISIAMKLGLAPFHFWVPEV-----SQGTSLLSGTILLT--WQKLAPISILHQI- 145
Cdd:PRK08676 188 lnWTELAAHASllspsvlgASFLFIFIGFLAKSGLVPFHTWLPAAyakapSVVSALLSGTVLNIgiYGILRLSALLRQSg 267
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1682081789 146 TTSIDTTLLLTMAVLSIAIGGWGGLNQTQLRKIMAYSSIAHMGWMMAII 194
Cdd:PRK08676 268 AAEQFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGI 316
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
13-265 |
1.27e-05 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 47.13 E-value: 1.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 13 LFSGTMITMfsshwllIWTGLEINMF-----TMIPILML----KRNPRSTEAATKYFLMQATASMLLMMGVMINLMYSGQ 83
Cdd:PRK12649 119 LFMGSMIGM-------VFSGNTIQLFifwelTSITSFMLigywRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGT 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 84 WTIMKIFNQPASY--------------IITISIAMKLGLAPFHFWVPEVSQGTSLLSG---TILLTWQKLAPISILHQIT 146
Cdd:PRK12649 192 YDIATILQDSELIenikghplflitliLIFIGAAAKSAQGPFYIWLPNAMEAPTPVSAflhSATMVKAGVYLVARIHPIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 147 TSIDTTLLLT--MAVLSIAIGGWGGLNQTQLRKIMAYSSIAHMGWMMAIIIYN----PTLMILNLTIYLL----MTTSMF 216
Cdd:PRK12649 272 SGTEAWFILVsgTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTtyhePGLGVAAATFHLLnhatFKACLF 351
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1682081789 217 LL--FIQQLSTT--TLALTHTWNTMPFLTILTTTTLLSMGGLPPLSGFLPKWM 265
Cdd:PRK12649 352 LVagIVAHEAATrdIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEM 404
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-302 |
1.19e-04 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 43.87 E-value: 1.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 34 EINMFTMIPILMLKRNPRSTEAATKYFLMQATASMLLMMGVMINLMYSGQWTI----MKIFNQPASYIITISIAMKL--- 106
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNItdihNALLVNPTSPVIYGGLLLLIfgl 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 107 ----GLAPFHFWVPEVSQGTSLLSGTILLTWQKLAPISILHQITT--------SIDTTLLLTMAVLSIAIGGWGGLNQTQ 174
Cdd:PRK06277 210 lygsGLPPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALMLVIFKlfgglsyfPSAQGVLIALSVLAMVFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 175 LRKIMAYSSIAHMGWMMAIIIYNPTLMI-------LNLTIYllmTTSMFL----LFIQQLSTTTLALTHTWNTMPFLTIL 243
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLALGTPLGIvagifhaINHVIY---KSALFLgagiVSYRTKTSNLRKLGGLLPVMPVVAFM 366
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1682081789 244 TTTTLLSMGGLPPLSGFLPKWMIIQEMTKNDLITLPTAMAVMALLNLYFYMRLVYSTSL 302
Cdd:PRK06277 367 VLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFYLIYL 425
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
100-211 |
1.89e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 43.12 E-value: 1.89e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 100 ISIAMKLGLAPFHFWVPEVS-----QGTSLLSGTIL---------LTWQklapisiLHQITTSIDTTLLLTMAVLSIAIG 165
Cdd:MTH00217 214 LSLAIKIPKIPFHIWLPQAHveapvAGSVILAGVLLklggygfirFSWP-------LLPEASEYFSPLIQTLSLLAIIYG 286
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1682081789 166 GWGGLNQTQLRKIMAYSSIAHMGwMMAIIIYNPTLMILNLTIYLLM 211
Cdd:MTH00217 287 SLTTCRQVDLKRIIAYSSVAHMG-LVTLGIFSHTIQGLVAAIFLML 331
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-191 |
3.38e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 42.33 E-value: 3.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 55 AATKYFLMQATASMLLMMGVMINLMYSGQWTimkiFNQPA----SYIIT----------ISIAMKLGLAPFHFWVP---- 116
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALSGDTFT----FDLAElgakSYPLAlelllyagflIAFGVKLPIFPLHTWLPdahg 213
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1682081789 117 EVSQGTSLLSGTILLTWQKLAPISILHQITTSIDTTLLLTMAVLSIAIGGWGGLN---QTQLRKIMAYSSIAHMGWMM 191
Cdd:PRK12561 214 EASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPALAILGVVNIIYGALNafaQDNVKRRLAYSSVSHMGFVL 291
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
58-296 |
3.43e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 42.24 E-value: 3.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 58 KYFLMQATASMLLMMGVMInlMYSGQWT---------IMKIFNQPASYIITISI------AMKLGLAPFHFWVPEVSQG- 121
Cdd:PRK07691 162 KYVLINVVSSAFFVVAVAI--LYSVVGTlnmadisvkIAELSAGQTGLITVVAIlflfvfATKAGLFPLYFWLPGSYYAp 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 122 ---TSLLSGTiLLTWQKLAPI----SILHQITTSIDTTLLLTMAVLSIAIGGWGGLNQTQLRKIMAYSSIAHMGWM-MAI 193
Cdd:PRK07691 240 piaIAALFGA-LLTKVGVYAIartfTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVIlVGV 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 194 IIYNPTLMIlnLTIYLLM-----TTSMFLlfiqqLSTTTLALTHTWN---------TMPFLTILTTTTLLSMGGLPPLSG 259
Cdd:PRK07691 319 AMMTESGMI--GAIYYLIhdmivKAALFL-----LIGIMIKITGTTDlkkmgglikRYPVLGWMFFIAALSLAGIPPLSG 391
|
250 260 270
....*....|....*....|....*....|....*..
gi 1682081789 260 FLPKWMIIQEMTKNDLITLPTAMAVMALLNLYFYMRL 296
Cdd:PRK07691 392 FYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
98-191 |
4.41e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 41.99 E-value: 4.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 98 ITISIAMKLGLAPFHFWVP----EVSQGTSLLSGTILL-----------------TWQKLAPisilhqittsidttLLLT 156
Cdd:PRK06473 211 ILVGFGIKIPLVPFHTWLPdahvEASTPVSVLLAGVLLklgtygllrfgvglfpeAWVYLAP--------------WLAT 276
|
90 100 110
....*....|....*....|....*....|....*
gi 1682081789 157 MAVLSIAIGGWGGLNQTQLRKIMAYSSIAHMGWMM 191
Cdd:PRK06473 277 WAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYIL 311
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
48-287 |
6.81e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 41.41 E-value: 6.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 48 RNPRSTEAATKYFLMQATASMLLMMGVMINLMYSGQWTIMKIFNQP-----ASYIITISIA---MKLGLAPFHFWVPEV- 118
Cdd:PRK06521 158 REAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMRAAHlspfwASLVFLLALFgfgAKAGLVPLHVWLPRAh 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 119 ----SQGTSLLSGTILltwqKLAPISILHqitTSIDT--TLLLTMAVLSIAIGGWG-------GLNQTQLRKIMAYSSIA 185
Cdd:PRK06521 238 paapSHVSALMSGVML----KVAIYGILR---VVFDLlgAPGWWWGVLVLALGAISavlgvlyALAEHDLKRLLAYSTIE 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 186 HMGWM-------MAIIIYN-PTLMILNLT--IYLLMTTSMF--LLFiqqLST-TTLALTHTWN---------TMPFLTIL 243
Cdd:PRK06521 311 NIGIIfvglglaMVFIAYGmPLLAALALTaaLYHLLNHALFksLLF---LGAgAVLHATGTRDmeklgglirRMPWTAWA 387
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 1682081789 244 TTTTLLSMGGLPPLSGFLPKWMIIQE---MTKNDLITL----PTAMAVMAL 287
Cdd:PRK06521 388 FLIGCLAISALPPLNGFVSEWLLLQSllsSPGLPQWGLklavPIAAAMLAL 438
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
98-304 |
7.47e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 41.06 E-value: 7.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 98 ITISIAMKLGLAPFHFWVPEVS-----QGTSLLSGTIL---------LTW-------QKLAPISIlhqittsidttlllT 156
Cdd:MTH00226 236 IFLAMAVKIPIFPFHIWLPKAHveapvAGSVLLAGILLklggyglvrLSWpilplgaQNLAPAVI--------------A 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 157 MAVLSIAIGGWGGLNQTQLRKIMAYSSIAHMGwMMAIIIYNPTLMILNLTIYLLMTTSMFLLFIQQLSTTTLALTHTW-- 234
Cdd:MTH00226 302 MGIVGIVYGSFATCRQIDVKRLVAYSSVAHMG-LVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRli 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 235 -------NTMPFLTILTTTTLLSMGGLPPLSGFLPKWM-IIQEMTKNDLITLPTAMAVM--ALLNLYFYMRLVYSTSLTL 304
Cdd:MTH00226 381 kyyrglsITMPIWGTIMIVTSLANVAVPPSGNFIGEYLsILSSFNWNPIIGVFVCSGVIlsAVYSFYFANRVTFGAPGNL 460
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
152-288 |
9.06e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 40.99 E-value: 9.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 152 TLLLTMAVLSIAIGGWGGLNQTQLRKIMAYSSIAHMGWMMAIIIYNPTLMILNLTIYLLMTT----SMFLL--------- 218
Cdd:PRK12666 280 DWLLPGGLATLAFGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTlaaaALFLLadlverqrg 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 219 ------------FIQQLSTTTLALTHTWNTMPFLTILTTTTLLSMGGLPPLSGFLPKWMIIQEMTKNDLITLPTAMAVMA 286
Cdd:PRK12666 360 aaadrlavtpelYDLDEEEEEEVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQALLNPPGAGAAWWLWALV 439
|
..
gi 1682081789 287 LL 288
Cdd:PRK12666 440 LL 441
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
110-263 |
1.54e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 40.29 E-value: 1.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 110 PFHFWVPE-------VSqgTSLLSGTILltwqkLAPISILHQIT-----TSIDTTLLLTMAVLSIAIGGWGGLNQTQLRK 177
Cdd:PRK12647 213 PFHFWLPNameaptpVS--AYLHSATMV-----KAGIYLLARLNpvlggTPLWQTILPLFGGLTMLTGALLAVRQTDLKL 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 178 IMAYSSIAHMGWMMAIIIYNPTLMILNLTIYL----LMTTSMFLLF-IQQLSTTTLALTHT---WNTMPFLTILTTTTLL 249
Cdd:PRK12647 286 ILAYSTVSALGTLVMLLGLGSELAIKAAVLFLvahsLYKGALFMVAgIIDHETGTRDITKLgglRRAMPITAAAALLAAL 365
|
170
....*....|....
gi 1682081789 250 SMGGLPPLSGFLPK 263
Cdd:PRK12647 366 SMAGLPPLFGFLAK 379
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
151-267 |
1.75e-03 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 40.19 E-value: 1.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 151 TTLLLTMAVLSIAIGGWGGLNQTQLRKIMAYSSIAHMGW-MMAIIIYNpTLMILNLTIYL----LMTTSMFLL---FIQQ 222
Cdd:PRK05846 277 APIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFvTLGIFAGN-QLGIQGAIFQMishgLSSAALFLLvgvLYDR 355
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1682081789 223 LSTTTLA-LTHTWNTMPFLTILTTTTLLSMGGLPPLSGFLPKWMII 267
Cdd:PRK05846 356 LHTRDIAdYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLIL 401
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
10-190 |
1.95e-03 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 39.91 E-value: 1.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 10 MSTLFSGTMITMFSSHWL-LIWTGLEINMFTMIPILMLKRNPRSTEAATKYFLM------QAT-ASMLLMMG---VMINL 78
Cdd:PRK06458 113 MYQLFLFTMLLALTSNNLgLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIIcsvgvaFALfGTILVYANaatVMGDG 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 79 MYSGQWT------------IMKIfnqpASYIITISIAMKLGLAPFHFWVPEV-SQGTS----LLSGtILLTWQKLAPISI 141
Cdd:PRK06458 193 EMAILWTellkhaslldptLMKL----AFVFLLIGFGTKVGLFPMHAWLPDAhSEAPSpvsaLLSG-VLLNVALYAVLRY 267
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1682081789 142 LHQITTSIDT----TLLLTMAVLSIAIGGWGGLNQTQLRKIMAYSSIAHMGWM 190
Cdd:PRK06458 268 YILIDAAIGSdfpgRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLI 320
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
152-268 |
1.98e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 39.95 E-value: 1.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 152 TLLLTMAVLSIAIGGWGGLNQTQLRKIMAYSSIAHMGWM-MAIIIYNPTLM---ILNLTIYLLMTTSMFL---LFIQQLS 224
Cdd:PRK12665 274 TLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMvFGIALSTVAGLsgaIYYVAHHITVQTTLFLvvgLIERQAG 353
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 1682081789 225 TTTLA-LTHTWNTMPFLTILTTTTLLSMGGLPPLSGFLPKWMIIQ 268
Cdd:PRK12665 354 SSSLRrLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
4-299 |
3.27e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 39.03 E-value: 3.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 4 MTLSIIMSTLFSGTMITMFSSHWLLiwtgleinMFTMIPILMLKRNPRSTEAATKYF-LMQATASMLLMMGVMI--NLMY 80
Cdd:PRK06589 124 LTILIGVLIALSSDLFTMFVCYELL--------TISTAFLIGHTRNNISLSGGYKYLkILMISALLLFLPAVILiyTKTG 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 81 SGQWTIMKIFNQPASYIITISIAMKLG---LAPFHFWVPEVSQG----TSLLSGTILLTWQKLAPISILHQITTSIDTTL 153
Cdd:PRK06589 196 NLDFVSGGLFSKNQSIILLLMFIYGIAktaIFPVHSWLPAAMVAhypvSALLHAVIVVKTGLFCIYKILLYIFGLSYLQR 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 154 LLTM-------AVLSIAIGGWGGLNQTQLRKIMAYSSIAHMGWMM--AIIIYNPTL--MILNLTIYLLMTTSMFLLFIQQ 222
Cdd:PRK06589 276 IFAEfnwlifiPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALlsAFILTPKALgaAILHLVSHSFAKICLFYSMGSI 355
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 223 LSTTTL----ALTHTWNTMPFLTILTTTTLLSMGGLPPLSGFLPKWMIIQEMTKNDLITLPTAMA----VMALLNLYFYM 294
Cdd:PRK06589 356 YSLKKEdqvdKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMlvviASSILSALYLL 435
|
....*
gi 1682081789 295 RLVYS 299
Cdd:PRK06589 436 KILSS 440
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
107-272 |
4.94e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 38.65 E-value: 4.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 107 GLAPFHFWVPEVSQGTSLLSGTILLTwqKLAPISILHQITTSIDT--------TLLLTMAVLSIAIGGWGGLNQTQLRKI 178
Cdd:PRK08042 195 GIIPLHGWVPQAHANASAPAAALFST--VVMKIGLLGILTLSLLGgnaplwwgVALLVLGMITAFVGGLYALMEHNIQRL 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 179 MAYSSIAHMGWMM--------AIIIYNPTLMILNLT--IYLLMTTSMFLlfiqqlSTTTLALTHTW-------------- 234
Cdd:PRK08042 273 LAYHTLENIGIILlglgagvtGIALEQPALIALGLVggLYHLLNHSLFK------SVLFLGAGSVWfrtghrdieklggi 346
|
170 180 190
....*....|....*....|....*....|....*....
gi 1682081789 235 -NTMPFLTILTTTTLLSMGGLPPLSGFLPKWMIIQEMTK 272
Cdd:PRK08042 347 gKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
55-191 |
5.15e-03 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 38.39 E-value: 5.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 55 AATKYFLMQATASMLLMMGVM-INLMYSGQWT--IMKIFNQpaSYIITISI----------AMKLGLAPFHFWVP----E 117
Cdd:CHL00011 163 SATKFILYTAGGSIFLLIGVLgMGLYGSNEPTlnFETLANQ--SYPVALEIlfyigfliayAVKLPIIPLHTWLPdthgE 240
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1682081789 118 VSQGTSLLSGTILLTWQKLAPISILHQITT---SIDTTLLLTMAVLSIAIGGWGGLNQTQLRKIMAYSSIAHMGWMM 191
Cdd:CHL00011 241 AHYSTCMLLAGILLKMGAYGLIRINMELLPhahSIFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFII 317
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
152-297 |
8.04e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 37.79 E-value: 8.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1682081789 152 TLLLTMAVLSIAIGGWGGLNQTQLRKIMAYSSIAHMGWMMAIIIYNPTLMILNLTIYL----LMTTSMFLLF----IQQL 223
Cdd:PRK12662 280 NVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIvnhsIVKSALFMVSgsisYHFG 359
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1682081789 224 STTTLALTHTWNTMPFLTILTTTTLLSMGGLPPLSGFLPKWMIIQEMTKNDLITLPTAMAVMALLNLYFYMRLV 297
Cdd:PRK12662 360 TTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVLLVGSGLSVIYVWKIV 433
|
|
| |
