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Conserved domains on  [gi|1693855959|gb|QDF59186|]
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NADH dehydrogenase subunit 1, partial (mitochondrion) [Ascaris lumbricoides]

Protein Classification

complex I subunit 1 family protein( domain architecture ID 103)

complex I subunit 1 family protein similar to NADH dehydrogenase subunit 1, which is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

EC:  7.1.1.-
Gene Ontology:  GO:0016655|GO:0016020
PubMed:  23417064|24059520
SCOP:  4005664

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK06076 super family cl00469
NADH-quinone oxidoreductase subunit NuoH;
1-126 6.16e-59

NADH-quinone oxidoreductase subunit NuoH;


The actual alignment was detected with superfamily member MTH00090:

Pssm-ID: 469782  Cd Length: 284  Bit Score: 183.18  E-value: 6.16e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693855959   1 LLGGSQQRIGPNKVSFMGFLQAIFDGVKLLKKEQMTPLNSSEISFILVPGIFFIVMYLEWFVLPFFYDFMTFEYSILFFL 80
Cdd:MTH00090   23 LLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVLPYFFDFLSFEYSLLFFL 102

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1693855959  81 CLIGFSVYTTLVSGMVKKSKYGMVGAIRASSQSVSYEIAFSLYLLA 126
Cdd:MTH00090  103 CLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLS 148
 
Name Accession Description Interval E-value
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 1-126 6.16e-59

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 183.18  E-value: 6.16e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693855959   1 LLGGSQQRIGPNKVSFMGFLQAIFDGVKLLKKEQMTPLNSSEISFILVPGIFFIVMYLEWFVLPFFYDFMTFEYSILFFL 80
Cdd:MTH00090   23 LLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVLPYFFDFLSFEYSLLFFL 102

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1693855959  81 CLIGFSVYTTLVSGMVKKSKYGMVGAIRASSQSVSYEIAFSLYLLA 126
Cdd:MTH00090  103 CLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLS 148
NADHdh pfam00146
NADH dehydrogenase;
6-126 1.97e-28

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 104.86  E-value: 1.97e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693855959   6 QQRIGPNKVSFMGFLQAIFDGVKLLKKEQMTPLNSSEISFILVPGIFFIVMYLEWFVLPFFYDFMT--FEYSILFFLCLI 83
Cdd:pfam00146  28 QRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFGPGLVLadLNVGILYILALS 107

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 1693855959  84 GFSVYTTLVSGMVKKSKYGMVGAIRASSQSVSYEIAFSLYLLA 126
Cdd:pfam00146 108 SLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLA 150
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 6-126 9.73e-26

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 98.28  E-value: 9.73e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693855959   6 QQRIGPNKVSFMGFLQAIFDGVKLLKKEQMTPLNSSEISFILVPGIFFIVMYLEWFVLPFFYDF--MTFEYSILFFLCLI 83
Cdd:COG1005    41 QDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFGPGLvlADLNVGLLYVLAVS 120

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 1693855959  84 GFSVYTTLVSGMVKKSKYGMVGAIRASSQSVSYEIAFSLYLLA 126
Cdd:COG1005   121 SLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLG 163
 
Name Accession Description Interval E-value
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 1-126 6.16e-59

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 183.18  E-value: 6.16e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693855959   1 LLGGSQQRIGPNKVSFMGFLQAIFDGVKLLKKEQMTPLNSSEISFILVPGIFFIVMYLEWFVLPFFYDFMTFEYSILFFL 80
Cdd:MTH00090   23 LLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVLPYFFDFLSFEYSLLFFL 102

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1693855959  81 CLIGFSVYTTLVSGMVKKSKYGMVGAIRASSQSVSYEIAFSLYLLA 126
Cdd:MTH00090  103 CLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLS 148
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 2-126 7.14e-30

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 108.80  E-value: 7.14e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693855959   2 LGGSQQRIGPNKVSFMGFLQAIFDGVKLLKKEQMTPLNSSEISFILVPGIFFIVMYLEWFVLPFFYDFMTFEYSILFFLC 81
Cdd:MTH00143   29 LGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLYPSYFSSSYFGWGLLFFLC 108

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1693855959  82 LIGFSVYTTLVSGMVKKSKYGMVGAIRASSQSVSYEIAFSLYLLA 126
Cdd:MTH00143  109 VSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLF 153
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 1-125 9.10e-30

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 108.70  E-value: 9.10e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693855959   1 LLGGSQQRIGPNKVSFMGFLQAIFDGVKLLKKEQMTPLNSSEISFILVPGIFFIVMYLEWFVLPFFYDFMTFEYSILFFL 80
Cdd:MTH00193   29 VLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPYLFNLISFNLGILFFL 108

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1693855959  81 CLIGFSVYTTLVSGMVKKSKYGMVGAIRASSQSVSYEIAFSLYLL 125
Cdd:MTH00193  109 CCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILL 153
NADHdh pfam00146
NADH dehydrogenase;
6-126 1.97e-28

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 104.86  E-value: 1.97e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693855959   6 QQRIGPNKVSFMGFLQAIFDGVKLLKKEQMTPLNSSEISFILVPGIFFIVMYLEWFVLPFFYDFMT--FEYSILFFLCLI 83
Cdd:pfam00146  28 QRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFGPGLVLadLNVGILYILALS 107

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 1693855959  84 GFSVYTTLVSGMVKKSKYGMVGAIRASSQSVSYEIAFSLYLLA 126
Cdd:pfam00146 108 SLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLA 150
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 1-126 9.42e-28

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 103.19  E-value: 9.42e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693855959   1 LLGGSQQRIGPNKVSFMGFLQAIFDGVKLLKKEQMTPLNSSEISFILVPGIFFIVMYLEWFVLPFFYDFMTFEYSILFFL 80
Cdd:MTH00225   28 VLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLILSLILWSLYPSMFSIYSFKFGILFFL 107

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1693855959  81 CLIGFSVYTTLVSGMVKKSKYGMVGAIRASSQSVSYEIAFSLYLLA 126
Cdd:MTH00225  108 CISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLS 153
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 2-125 1.95e-26

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 99.98  E-value: 1.95e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693855959   2 LGGSQQRIGPNKVSFMGFLQAIFDGVKLLKKEQMTPLNSSEISFILVPGIFFIVMYLEWFVLPFFYDFMTFEYSILFFLC 81
Cdd:MTH00218   30 LGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLALLLWMPLPLPFSLINLNLGVLFILA 109

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 1693855959  82 LIGFSVYTTLVSGMVKKSKYGMVGAIRASSQSVSYEIAFSLYLL 125
Cdd:MTH00218  110 ISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIIL 153
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 6-126 9.73e-26

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 98.28  E-value: 9.73e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693855959   6 QQRIGPNKVSFMGFLQAIFDGVKLLKKEQMTPLNSSEISFILVPGIFFIVMYLEWFVLPFFYDF--MTFEYSILFFLCLI 83
Cdd:COG1005    41 QDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFGPGLvlADLNVGLLYVLAVS 120

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 1693855959  84 GFSVYTTLVSGMVKKSKYGMVGAIRASSQSVSYEIAFSLYLLA 126
Cdd:COG1005   121 SLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLG 163
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 1-125 1.91e-25

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 97.12  E-value: 1.91e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693855959   1 LLGGSQQRIGPNKVSFMGFLQAIFDGVKLLKKEQMTPLNSSEISFILVPGIFFIVMYLEWFVLPFFYDFMTFEYSILFFL 80
Cdd:MTH00195   29 ILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALALILWVPIPSPFGFSSINLSVLFFL 108

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1693855959  81 CLIGFSVYTTLVSGMVKKSKYGMVGAIRASSQSVSYEIAFSLYLL 125
Cdd:MTH00195  109 CVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIIL 153
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 1-125 2.49e-25

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 97.00  E-value: 2.49e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693855959   1 LLGGSQQRIGPNKVSFMGFLQAIFDGVKLLKKEQMTPLNSSEISFILVPGIFFIVMYLEWFVLPFFYDFMTFEYSILFFL 80
Cdd:MTH00071   32 VLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLALIIWTPLPMPNNLSNLNLGILFIL 111

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1693855959  81 CLIGFSVYTTLVSGMVKKSKYGMVGAIRASSQSVSYEIAFSLYLL 125
Cdd:MTH00071  112 ALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILL 156
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 1-126 5.22e-24

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 93.81  E-value: 5.22e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693855959   1 LLGGSQQRIGPNKVSFMGFLQAIFDGVKLLKKEQMTPLNSSEISFILVPGIFFIVMYLEWFVLPFFYDFMTFEYSILFFL 80
Cdd:MTH00111   32 ILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLALTIWTPLPMPFPLADLNLGLLFLL 111

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1693855959  81 CLIGFSVYTTLVSGMVKKSKYGMVGAIRASSQSVSYEIAFSLYLLA 126
Cdd:MTH00111  112 AMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLS 157
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
1-126 9.40e-24

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 92.95  E-value: 9.40e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693855959   1 LLGGSQQRIGPNKVSFMGFLQAIFDGVKLLKKEQMTPLNSSEISFILVPGIFFIVMYLEWFVLPFFYDFMT--FEYSILF 78
Cdd:PRK06076   37 VLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLAWAVIPFGPELVIadLNVGILY 116

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1693855959  79 FLCLIGFSVYTTLVSGMVKKSKYGMVGAIRASSQSVSYEIAFSLYLLA 126
Cdd:PRK06076  117 ILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLA 164
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 2-126 1.76e-23

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 92.36  E-value: 1.76e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693855959   2 LGGSQQRIGPNKVSFMGFLQAIFDGVKLLKKEQMTPLNSSEISFILVPGIFFIVMYLEWFVLPFFYDFMTFEYSILFFLC 81
Cdd:MTH00134   34 LGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLALTLWAPMPMPYPVTDLNLGILFILA 113

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1693855959  82 LIGFSVYTTLVSGMVKKSKYGMVGAIRASSQSVSYEIAFSLYLLA 126
Cdd:MTH00134  114 LSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLS 158
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 2-125 7.12e-23

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 90.81  E-value: 7.12e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693855959   2 LGGSQQRIGPNKVSFMGFLQAIFDGVKLLKKEQMTPLNSSEISFILVPGIFFIVMYLEWFVLPFFYDFMTFEYSILFFLC 81
Cdd:MTH00040   32 LGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLALLLWSLIPVPTPTLNVNLSLLLVLG 111

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 1693855959  82 LIGFSVYTTLVSGMVKKSKYGMVGAIRASSQSVSYEIAFSLYLL 125
Cdd:MTH00040  112 LSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILL 155
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-126 1.50e-22

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 89.68  E-value: 1.50e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693855959   1 LLGGSQQRIGPNKVSFMGFLQAIFDGVKLLKKEQMTPLNSSEISFILVPGIFFIVMYLEWFVLPFFYDFMTFEYSILFFL 80
Cdd:MTH00104   27 VLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLALTMWIPLPMPYPLINMNLGVLFIL 106

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1693855959  81 CLIGFSVYTTLVSGMVKKSKYGMVGAIRASSQSVSYEIAFSLYLLA 126
Cdd:MTH00104  107 AMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLS 152
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 2-126 1.16e-21

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 87.14  E-value: 1.16e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693855959   2 LGGSQQRIGPNKVSFMGFLQAIFDGVKLLKKEQMTPLNSSEISFILVPGIFFIVMYLEWFVLPFFYDFMTFEYSILFFLC 81
Cdd:MTH00010   31 LGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLWSLYPHKHPSFFLKFSILLFLC 110

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1693855959  82 LIGFSVYTTLVSGMVKKSKYGMVGAIRASSQSVSYEIAFSLYLLA 126
Cdd:MTH00010  111 VSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLS 155
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 1-126 2.50e-17

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 75.93  E-value: 2.50e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693855959   1 LLGGSQQRIGPNKVSFMGFLQAIFDGVKLLKKEQMTPLNSSEISFILVPGIFFIVMYLEWFVLPFFYDFMTFEY--SILF 78
Cdd:MTH00216   33 VLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLALIVWGVIPYERGVLISDFkiGILY 112

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1693855959  79 FLCLIGFSVYTTLVSGMVKKSKYGMVGAIRASSQSVSYEIAFSLYLLA 126
Cdd:MTH00216  113 ILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 160
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 1-126 1.75e-16

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 73.22  E-value: 1.75e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693855959   1 LLGGSQQRIGPNKVSFMGFLQAIFDGVKLLKKEQMTPLNSSEISFILVPGIFFIVMYLEWFVLPFFYD--FMTFEYSILF 78
Cdd:MTH00054   29 VLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAWGVIPYGEGvvLSDLGIGILY 108

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1693855959  79 FLCLIGFSVYTTLVSGMVKKSKYGMVGAIRASSQSVSYEIAFSLYLLA 126
Cdd:MTH00054  109 LFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 156
ndhA CHL00032
NADH dehydrogenase subunit 1
 4-126 1.34e-15

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 71.14  E-value: 1.34e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693855959   4 GSQQRIGPNKVSFMGFLQAIFDGVKLLKKEQMTPLNSSEISFILVPGIFFIVMYLEWFVLPFFYDFMTFEYSILFFLCLI 83
Cdd:CHL00032   57 GIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISILLSYLVIPFGYHLVLADLSIGVFLWIA 136

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1693855959  84 GFSVYTT--LVSGMVKKSKYGMVGAIRASSQSVSYEIAFSLYLLA 126
Cdd:CHL00032  137 ISSIAPIglLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLS 181
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 1-126 2.18e-15

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 70.43  E-value: 2.18e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693855959   1 LLGGSQQRIGPNKVSFMGFLQAIFDGVKLLKKEQMTPLNSSEISFILVPGIFFIVMYLEWFVLPFFYDFM--TFEYSILF 78
Cdd:MTH00029   34 VLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILAWAIVTMDQGVFlsDLDVGVLY 113

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 1693855959  79 FLCLIGFSVYTTLVSGMVKKSKYGMVGAIRASSQSVSYEIAFSLYLLA 126
Cdd:MTH00029  114 FLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIIS 161
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
6-126 6.50e-06

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 43.63  E-value: 6.50e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693855959   6 QQRIGPnkvsfmGFLQAIFDGVKLLKKEQMTPLNSSEIsFILVPGIFFIVMYLEWFVLPFFYDF--MTFEYSILFFLCLI 83
Cdd:COG0650    33 QGRRGP------PILQPYYDLLKLLRKETVVPETASWL-FRAAPYVALAAMLLAALLVPVLTTGppLSFSGDLIVLVYLL 105

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 1693855959  84 GFSVYTTLVSGMVKKSKYGMVGAIRASSQSVSYEIAFSLYLLA 126
Cdd:COG0650   106 ALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFA 148
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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