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Conserved domains on  [gi|1707765500|gb|QDP18078|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Ochrophlegma sp. TAMUIC IGC OR279]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
6-311 3.12e-136

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 387.97  E-value: 3.12e-136
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500   6 LIMLFLNFFLLIIFVLISVAFLTLFERSVLGYIHIRKGPNKIGFIGILQPFSDAVKLLIKEQTMPIMSNYFLYYFSPIFS 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500  86 LMISLFIWLVFPFMTYMCSFKYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVG 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500 166 SFNLFNFMIYQYYSWFLFIGFPLMISCFASCLAETNRSPFDFAEGESELVSGFNVEYSSGGFTLIFLAEYSSIIFMSMLI 245
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1707765500 246 SLMFFGGDFYSMIFYLKLSFLIFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLAFFCGLKILL 311
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
6-311 3.12e-136

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 387.97  E-value: 3.12e-136
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500   6 LIMLFLNFFLLIIFVLISVAFLTLFERSVLGYIHIRKGPNKIGFIGILQPFSDAVKLLIKEQTMPIMSNYFLYYFSPIFS 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500  86 LMISLFIWLVFPFMTYMCSFKYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVG 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500 166 SFNLFNFMIYQYYSWFLFIGFPLMISCFASCLAETNRSPFDFAEGESELVSGFNVEYSSGGFTLIFLAEYSSIIFMSMLI 245
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1707765500 246 SLMFFGGDFYSMIFYLKLSFLIFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLAFFCGLKILL 311
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
NADHdh pfam00146
NADH dehydrogenase;
14-303 9.50e-94

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 280.13  E-value: 9.50e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500  14 FLLIIFVLISVAFLTLFERSVLGYIHIRKGPNKIGFIGILQPFSDAVKLLIKEQTMPIMSNYFLYYFSPIFSLMISLFIW 93
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500  94 LVFPFMTYM--CSFKYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVGSFNLFN 171
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500 172 FMIYQYYSWFLFIGFPLMISCFASCLAETNRSPFDFAEGESELVSGFNVEYSSGGFTLIFLAEYSSIIFMSMLISLMFFG 251
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1707765500 252 G------DFYSMIFYLKLSFLIFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLAF 303
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
1-298 2.69e-89

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 269.69  E-value: 2.69e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500   1 MMLFDLIMLFLNFFLLIIFVLISVAFLTLFERSVLGYIHIRKGPNKIGFIGILQPFSDAVKLLIKEQTMPIMSNYFLYYF 80
Cdd:COG1005     3 LLLAPLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLL 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500  81 SPIFSLMISLFIWLVFPF--MTYMCSFKYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILL 158
Cdd:COG1005    83 APILAFIPALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLL 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500 159 SLIILVGSFNLFNFMIYQY-YSWFLFIGFPLMISCFASCLAETNRSPFDFAEGESELVSGFNVEYSSGGFTLIFLAEYSS 237
Cdd:COG1005   163 GVVLLAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYAN 242
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1707765500 238 IIFMSMLISLMFFGG-------DFYSMI-----FYLKLSFLIFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 298
Cdd:COG1005   243 MFLVSALATTLFLGGwlgpfpiLPLGGLpgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
6-311 3.12e-136

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 387.97  E-value: 3.12e-136
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500   6 LIMLFLNFFLLIIFVLISVAFLTLFERSVLGYIHIRKGPNKIGFIGILQPFSDAVKLLIKEQTMPIMSNYFLYYFSPIFS 85
Cdd:MTH00193    1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500  86 LMISLFIWLVFPFMTYMCSFKYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVG 165
Cdd:MTH00193   81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500 166 SFNLFNFMIYQYYSWFLFIGFPLMISCFASCLAETNRSPFDFAEGESELVSGFNVEYSSGGFTLIFLAEYSSIIFMSMLI 245
Cdd:MTH00193  161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1707765500 246 SLMFFGGDFYSMIFYLKLSFLIFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLAFFCGLKILL 311
Cdd:MTH00193  241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKIFL 306
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
7-309 3.20e-119

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 345.10  E-value: 3.20e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500   7 IMLFLNFFLLIIFVLISVAFLTLFERSVLGYIHIRKGPNKIGFIGILQPFSDAVKLLIKEQTMPIMSNYFLYYFSPIFSL 86
Cdd:MTH00225    1 MSFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500  87 MISLFIWLVFPFMTYMCSFKYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVGS 166
Cdd:MTH00225   81 ILSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLT 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500 167 FNLFNFMIYQYYSWFLFIGFPLMISCFASCLAETNRSPFDFAEGESELVSGFNVEYSSGGFTLIFLAEYSSIIFMSMLIS 246
Cdd:MTH00225  161 YNLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTS 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1707765500 247 LMFFGGDFYSM--IFYLKLSFLIFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLAFFCGLKI 309
Cdd:MTH00225  241 ILFFGGFFVTIdlFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
7-307 1.98e-112

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 327.98  E-value: 1.98e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500   7 IMLFLNFFLLIIFVLISVAFLTLFERSVLGYIHIRKGPNKIGFIGILQPFSDAVKLLIKEQTMPIMSNYFLYYFSPIFSL 86
Cdd:MTH00143    1 LVSLLSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500  87 MISLFIWLVFPFMTYMCSFKYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVGS 166
Cdd:MTH00143   81 ILALLLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGS 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500 167 FNLFNFMIYQYYSWFLFIGFPLMISCFASCLAETNRSPFDFAEGESELVSGFNVEYSSGGFTLIFLAEYSSIIFMSMLIS 246
Cdd:MTH00143  161 FSFIEISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTV 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1707765500 247 LMFFGGDF-----YSMIFYLKLSFLIFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLAFFCGL 307
Cdd:MTH00143  241 VLFFGGSSvlfllGGVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVL 306
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
6-307 1.08e-104

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 308.38  E-value: 1.08e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500   6 LIMLFLNFFLLIIFVLISVAFLTLFERSVLGYIHIRKGPNKIGFIGILQPFSDAVKLLIKEQTMPIMSNYFLYYFSPIFS 85
Cdd:MTH00218    1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500  86 LMISLFIWLVFPFMTYMCSFKYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVG 165
Cdd:MTH00218   81 LTLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500 166 SFNLFNFMIYQYYSWFLFIGFPLMISCFASCLAETNRSPFDFAEGESELVSGFNVEYSSGGFTLIFLAEYSSIIFMSMLI 245
Cdd:MTH00218  161 GFSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLS 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1707765500 246 SLMFFGGDFYSMIFYLKLSFLIFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLAFFCGL 307
Cdd:MTH00218  241 VILFLGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSL 302
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
6-314 4.03e-102

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 302.31  E-value: 4.03e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500   6 LIMLFLNFFLLIIFVLISVAFLTLFERSVLGYIHIRKGPNKIGFIGILQPFSDAVKLLIKEQTMPIMSNYFLYYFSPIFS 85
Cdd:MTH00071    4 LISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMA 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500  86 LMISLFIWLVFPFMTYMCSFKYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVG 165
Cdd:MTH00071   84 LTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTG 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500 166 SFNLFNFMIYQYYSWFLFIGFPLMISCFASCLAETNRSPFDFAEGESELVSGFNVEYSSGGFTLIFLAEYSSIIFMSMLI 245
Cdd:MTH00071  164 GFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLS 243
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1707765500 246 SLMFFGGDFY-------SMIFYLKLSFLIFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLAFFCGLKILLIMI 314
Cdd:MTH00071  244 TILFLGSTYNhlqpelsTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGI 319
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
6-298 9.33e-102

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 301.43  E-value: 9.33e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500   6 LIMLFLNFFLLIIFVLISVAFLTLFERSVLGYIHIRKGPNKIGFIGILQPFSDAVKLLIKEQTMPIMSNYFLYYFSPIFS 85
Cdd:MTH00111    4 LLLNLINPLLYIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILA 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500  86 LMISLFIWLVFPFMTYMCSFKYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVG 165
Cdd:MTH00111   84 LLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSG 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500 166 SFNLFNFMIYQYYSWFLFIGFPLMISCFASCLAETNRSPFDFAEGESELVSGFNVEYSSGGFTLIFLAEYSSIIFMSMLI 245
Cdd:MTH00111  164 GYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLT 243
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500 246 SLMFF-------GGDFYSMIFYLKLSFLIFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 298
Cdd:MTH00111  244 TILFLnpstlnlPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTL 303
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
8-314 1.06e-99

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 295.76  E-value: 1.06e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500   8 MLFLNFFLLIIFVLISVAFLTLFERSVLGYIHIRKGPNKIGFIGILQPFSDAVKLLIKEQTMPIMSNYFLYYFSPIFSLM 87
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500  88 ISLFIWLVFPFMTYMCSFKYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVGSF 167
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500 168 NLFNFMIYQYYSWFLFIGFPLMISCFASCLAETNRSPFDFAEGESELVSGFNVEYSSGGFTLIFLAEYSSIIFMSMLISL 247
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1707765500 248 MFFGG-------DFYSMIFYLKLSFLIFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLAFFCGLKILLIMI 314
Cdd:MTH00104  241 LFLGAfhnpympELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASI 314
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
6-311 4.03e-99

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 293.96  E-value: 4.03e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500   6 LIMLFLNFFLLIIFVLISVAFLTLFERSVLGYIHIRKGPNKIGFIGILQPFSDAVKLLIKEQTMPIMSNYFLYYFSPIFS 85
Cdd:MTH00195    1 WMISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500  86 LMISLFIWLVFPFMTYMCSFKYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVG 165
Cdd:MTH00195   81 LALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500 166 SFNLFNFMIYQYYSWFLFIGFPLMISCFASCLAETNRSPFDFAEGESELVSGFNVEYSSGGFTLIFLAEYSSIIFMSMLI 245
Cdd:MTH00195  161 SFDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLT 240
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1707765500 246 SLMFFGGDfYSMIFYLKLSFLIFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLAFFCGLKILL 311
Cdd:MTH00195  241 TILFLGGG-GTIIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
2-311 7.96e-97

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 288.81  E-value: 7.96e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500   2 MLFDLIMLFLNFFLLIIFVLISVAFLTLFERSVLGYIHIRKGPNKIGFIGILQPFSDAVKLLIKEQTMPIMSNYFLYYFS 81
Cdd:MTH00134    1 MLSTLITHIINPLAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLAT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500  82 PIFSLMISLFIWLVFPFMTYMCSFKYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLI 161
Cdd:MTH00134   81 PMLALTLALTLWAPMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVI 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500 162 ILVGSFNLFNFMIYQYYSWFLFIGFPLMISCFASCLAETNRSPFDFAEGESELVSGFNVEYSSGGFTLIFLAEYSSIIFM 241
Cdd:MTH00134  161 IFTGGFTLQTFNTAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLM 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1707765500 242 SMLISLMFFGGDFY-------SMIFYLKLSFLIFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLAFFCGLKILL 311
Cdd:MTH00134  241 NTLSAILFLGASHIptlpeltTINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAF 317
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
5-311 3.20e-94

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 282.25  E-value: 3.20e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500   5 DLIMLFLNFFLLIIFVLISVAFLTLFERSVLGYIHIRKGPNKIGFIGILQPFSDAVKLLIKEQTMPIMSNYFLYYFSPIF 84
Cdd:MTH00040    2 SVILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVL 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500  85 SLMISLFIWLVFPFMTYMCSFKYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILV 164
Cdd:MTH00040   82 FLFLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFS 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500 165 GSFNLFNFMIYQYYSWFLFIGFPLMISCFASCLAETNRSPFDFAEGESELVSGFNVEYSSGGFTLIFLAEYSSIIFMSML 244
Cdd:MTH00040  162 GSFSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLL 241
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1707765500 245 ISLMFFGGD--------FYSMIFYLKLSFLIFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLAFFCGLKILL 311
Cdd:MTH00040  242 SVILFLGGGspfneifpINIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLL 316
NADHdh pfam00146
NADH dehydrogenase;
14-303 9.50e-94

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 280.13  E-value: 9.50e-94
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500  14 FLLIIFVLISVAFLTLFERSVLGYIHIRKGPNKIGFIGILQPFSDAVKLLIKEQTMPIMSNYFLYYFSPIFSLMISLFIW 93
Cdd:pfam00146   3 LLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAF 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500  94 LVFPFMTYM--CSFKYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVGSFNLFN 171
Cdd:pfam00146  83 AVIPFGPGLvlADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSE 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500 172 FMIYQYYSWFLFIGFPLMISCFASCLAETNRSPFDFAEGESELVSGFNVEYSSGGFTLIFLAEYSSIIFMSMLISLMFFG 251
Cdd:pfam00146 163 IVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLG 242
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1707765500 252 G------DFYSMIFYLKLSFLIFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLAF 303
Cdd:pfam00146 243 GwlgpfpLPGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
1-298 2.69e-89

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 269.69  E-value: 2.69e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500   1 MMLFDLIMLFLNFFLLIIFVLISVAFLTLFERSVLGYIHIRKGPNKIGFIGILQPFSDAVKLLIKEQTMPIMSNYFLYYF 80
Cdd:COG1005     3 LLLAPLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLL 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500  81 SPIFSLMISLFIWLVFPF--MTYMCSFKYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILL 158
Cdd:COG1005    83 APILAFIPALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLL 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500 159 SLIILVGSFNLFNFMIYQY-YSWFLFIGFPLMISCFASCLAETNRSPFDFAEGESELVSGFNVEYSSGGFTLIFLAEYSS 237
Cdd:COG1005   163 GVVLLAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYAN 242
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1707765500 238 IIFMSMLISLMFFGG-------DFYSMI-----FYLKLSFLIFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 298
Cdd:COG1005   243 MFLVSALATTLFLGGwlgpfpiLPLGGLpgilwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
7-312 1.43e-87

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 264.72  E-value: 1.43e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500   7 IMLFLNFFLLIIFVLISVAFLTLFERSVLGYIHIRKGPNKIGFIGILQPFSDAVKLLIKEQTMPIMSNYFLYYFSPIFSL 86
Cdd:MTH00010    3 ISFFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSL 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500  87 MISLFIWLVFPFMTYMCSFKYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVGS 166
Cdd:MTH00010   83 ILALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQT 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500 167 FNlFNFMIYQYYSWFLFIGFPLMISCFASCLAETNRSPFDFAEGESELVSGFNVEYSSGGFTLIFLAEYSSIIFMSMLIS 246
Cdd:MTH00010  163 FS-FSKIIMSQYSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTS 241
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500 247 LMFFG----GDFYSMIFYLKLSFLIFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLAFFCGLKILLI 312
Cdd:MTH00010  242 VFFTSfipsIFISDLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLMISIPIMFLLL 311
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
6-309 2.78e-85

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 259.27  E-value: 2.78e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500   6 LIMLFLNFFLLIIFVLISVAFLTLFERSVLGYIHIRKGPNKIGFIGILQPFSDAVKLLIKEQTMPIMSNYFLYYFSPIFS 85
Cdd:MTH00054    1 MGIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500  86 LMISLFIWLVFPFMT--YMCSFKYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIIL 163
Cdd:MTH00054   81 LTLAFIAWGVIPYGEgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLC 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500 164 VGSFNLFNFMIYQYYSWFLFIGFPLMISCFASCLAETNRSPFDFAEGESELVSGFNVEYSSGGFTLIFLAEYSSIIFMSM 243
Cdd:MTH00054  161 VGSLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMST 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1707765500 244 LISLMFFGGDFYSMI----------FYLKLSFLIFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLAFFCGLKI 309
Cdd:MTH00054  241 FGVILFLGGWLVISGptsyfsnfvwFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILI 316
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
2-307 3.85e-84

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 256.59  E-value: 3.85e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500   2 MLFDLIMLFLNFFLLIIFVLISVAFLTLFERSVLGYIHIRKGPNKIGFIGILQPFSDAVKLLIKEQTMPIMSNYFLYYFS 81
Cdd:MTH00216    1 MMVFIIFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500  82 PIFSLMISLFIWLVFPFM--TYMCSFKYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLS 159
Cdd:MTH00216   81 PVLSFTLALIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIIS 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500 160 LIILVGSFNLFNFMIYQYYS-WFLFIGFPLMISCFASCLAETNRSPFDFAEGESELVSGFNVEYSSGGFTLIFLAEYSSI 238
Cdd:MTH00216  161 VLLCVGSLSITEIVLAQNNGiWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHI 240
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1707765500 239 IFMSMLISLMFFGG--------DFYSMIFYLKLSFLIFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLAFFCGL 307
Cdd:MTH00216  241 ILMSCLTTILFLGGwlspikyfKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASV 317
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
6-298 2.22e-82

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 251.65  E-value: 2.22e-82
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500   6 LIMLFLNFFLLIIFVLISVAFLTLFERSVLGYIHIRKGPNKIGFIGILQPFSDAVKLLIKEQTMPIMSNYFLYYFSPIFS 85
Cdd:PRK06076    9 LLLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIA 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500  86 LMISLFIWLVFPFMTY--MCSFKYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIIL 163
Cdd:PRK06076   89 FIPAFLAWAVIPFGPElvIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLL 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500 164 VGSFNLFNFMIYQYYSWFLFIGFPLMISCFASCLAETNRSPFDFAEGESELVSGFNVEYSSGGFTLIFLAEYSSIIFMSM 243
Cdd:PRK06076  169 AGSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSA 248
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1707765500 244 LISLMFFGG----------DFYSMIFYLKLSFLIFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSL 298
Cdd:PRK06076  249 LITTLFLGGwlppfplgggIPGAIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
1-309 2.40e-69

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 219.12  E-value: 2.40e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500   1 MMLFDLIMLFLNFFLLIIFVLISVAFLTLFERSVLGYIHIRKGPNKIGFIGILQPFSDAVKLLIKEQTMPIMSNYFLYYF 80
Cdd:MTH00029    1 MTIYSYITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500  81 SPIFSLMISLFIWLVFPF--MTYMCSFKYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILL 158
Cdd:MTH00029   81 APIISFTLAILAWAIVTMdqGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIII 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500 159 SLIILVGSFNLFNFMIYQYYSWFLFIGFPLMISCFASCLAETNRSPFDFAEGESELVSGFNVEYSSGGFTLIFLAEYSSI 238
Cdd:MTH00029  161 SVILCVGSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNI 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500 239 IFMSMLISLMFFGG-----------------------DFYSMIFYLKLSFLIFCFIWVRGTLPRFRYDKLMYLAWKSFLP 295
Cdd:MTH00029  241 ILMSCMMTIFFLGGwlspldgiptppeafsifeqiasSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLP 320
                         330
                  ....*....|....
gi 1707765500 296 LSLNFLAFFCGLKI 309
Cdd:MTH00029  321 LSLGLVILTAGILI 334
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
12-309 4.35e-60

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 193.58  E-value: 4.35e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500  12 NFFLLIIFVLISVAFLTLFERSVLGYIHIRKGPNKIGFIGILQPFSDAVKLLIKEQTMPIMSNYFLYYFSPIFSLMISLF 91
Cdd:MTH00090    1 MLLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500  92 IWLVFPFMTYMCSFKYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVGSFNLFN 171
Cdd:MTH00090   81 EWFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVS 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500 172 FmiyqyyswFLFIGFPLMISCFASCLAETNRSPFDFAEGESELVSGFNVEYSSGGFTLIFLAEYSSIIFMSMLISLMFFg 251
Cdd:MTH00090  161 S--------FSLSLFVIYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFF- 231
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1707765500 252 gDFYSMIFYLKLSFLIFcfiwVRGTLPRFRYDKLMYLAWKSFLPLSLNFLAFFCGLKI 309
Cdd:MTH00090  232 -KFSFLMLFLIFSLLIF----IRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
7-301 6.97e-47

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 159.70  E-value: 6.97e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500   7 IMLFLNFFLLIIFVLISVAFLTLFERSVLGYIHIRKGPNKIGFIGILQPFSDAVKLLIKEQTMPIMSNYFLYYFSPIFSL 86
Cdd:MTH00058    1 IFGLVSGLEGLLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500  87 MISLFIWLVFPFMTYMCSFKYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILVGS 166
Cdd:MTH00058   81 LLVVFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGS 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500 167 FNLFNFMIYQYYSWFLFigfPLMISCFASC-LAETNRSPFDFAEGESELVSGFNVEYSSGGFTLIFLAEYSSIIFMSMLI 245
Cdd:MTH00058  161 YSLVDFYYSGWLSVLLF---PLIYILWLVCiLCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLG 237
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1707765500 246 SLMFFGGDFYSMIfylkLSFLIFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFL 301
Cdd:MTH00058  238 SVLFFGGGFVSIM----LLFHLLFFMWARATLPRVRYDYFVNFFWEYCLVLLILSL 289
ndhA CHL00032
NADH dehydrogenase subunit 1
3-298 1.18e-32

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 123.91  E-value: 1.18e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500   3 LFDLIMLFLNFFLLIIFVLISVAFLTLFERSVLGYIHIRKGPNKIGFIGILQPFSDAVKLLIKEQTMPIMSNYFLYYFSP 82
Cdd:CHL00032   23 VYGLIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGP 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500  83 IFSLMISLFIWLVFPFMTYM--CSFKYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSL 160
Cdd:CHL00032  103 SIAVISILLSYLVIPFGYHLvlADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 182
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500 161 IILVGSFNLFNFM----IYQYYSWFLF---IGFplmISCFASCLAETNRSPFDFAEGESELVSGFNVEYSSGGFTLIFLA 233
Cdd:CHL00032  183 SLLSNSLSTVDIVeaqsKYGFWGWNLWrqpIGF---IVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVA 259
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500 234 EYSSIIFMSMLISLMFFGG-----------DFYSM--------------IFYLKLSFLIFCFIWVRGTLPRFRYDKLMYL 288
Cdd:CHL00032  260 SYLNLLVSSLFVTVLYLGGwnlsipyifipELFEInktggvfgttigifITLAKTYLFLFISITTRWTLPRLRMDQLLNL 339
                         330
                  ....*....|
gi 1707765500 289 AWKSFLPLSL 298
Cdd:CHL00032  340 GWKFLLPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
7-304 2.34e-26

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 105.65  E-value: 2.34e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500   7 IMLFLNFFLLIIFVLISVAFLTLFERSVLGYIHIRKGPnkigfiGILQPFSDAVKLLIKEQTMPIMSNyFLYYFSPIFSL 86
Cdd:COG0650     1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETAS-WLFRAAPYVAL 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500  87 MISLFIWLVFPFMTYMC--SFKYGFLFFLCCTSLGVYTMMIAGWSSNSNYSLLGSLRSVAQTISYEVSLALILLSLIILV 164
Cdd:COG0650    74 AAMLLAALLVPVLTTGPplSFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLA 153
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1707765500 165 GSFNLFNFMIYQYYS---WFLFIGFPLMISCFASCLAETNRSPFDFAEGESELVSGFNVEYSSGGFTLIFLAEYSSIIFM 241
Cdd:COG0650   154 GSTSLSDIVAYQAAHgplLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVL 233
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1707765500 242 SMLISLMFFGGDFYS------MIFYLKLSFLIFCFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNFLAFF 304
Cdd:COG0650   234 LSLFVNLFLPWGIALtlllalLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAV 302
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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